[{"extern":"1","issue":"1","abstract":[{"text":"We prove there are finitely many isometry classes of planar central configurations (also called relative equilibria) in the Newtonian 5-body problem, except perhaps if the 5-tuple of positive masses belongs to a given codimension 2 subvariety of the mass space.","lang":"eng"}],"type":"journal_article","volume":176,"oa_version":"None","date_created":"2020-09-18T10:47:24Z","date_updated":"2021-01-12T08:19:44Z","author":[{"full_name":"Albouy, Alain","first_name":"Alain","last_name":"Albouy"},{"full_name":"Kaloshin, Vadim","first_name":"Vadim","last_name":"Kaloshin","id":"FE553552-CDE8-11E9-B324-C0EBE5697425","orcid":"0000-0002-6051-2628"}],"intvolume":" 176","publisher":"Princeton University Press","title":"Finiteness of central configurations of five bodies in the plane","publication_status":"published","status":"public","year":"2012","_id":"8503","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_identifier":{"issn":["0003-486X"]},"article_processing_charge":"No","month":"07","day":"01","language":[{"iso":"eng"}],"doi":"10.4007/annals.2012.176.1.10","date_published":"2012-07-01T00:00:00Z","page":"535-588","quality_controlled":"1","article_type":"original","citation":{"chicago":"Albouy, Alain, and Vadim Kaloshin. “Finiteness of Central Configurations of Five Bodies in the Plane.” Annals of Mathematics. Princeton University Press, 2012. https://doi.org/10.4007/annals.2012.176.1.10.","short":"A. Albouy, V. Kaloshin, Annals of Mathematics 176 (2012) 535–588.","mla":"Albouy, Alain, and Vadim Kaloshin. “Finiteness of Central Configurations of Five Bodies in the Plane.” Annals of Mathematics, vol. 176, no. 1, Princeton University Press, 2012, pp. 535–88, doi:10.4007/annals.2012.176.1.10.","apa":"Albouy, A., & Kaloshin, V. (2012). Finiteness of central configurations of five bodies in the plane. Annals of Mathematics. Princeton University Press. https://doi.org/10.4007/annals.2012.176.1.10","ieee":"A. Albouy and V. Kaloshin, “Finiteness of central configurations of five bodies in the plane,” Annals of Mathematics, vol. 176, no. 1. Princeton University Press, pp. 535–588, 2012.","ista":"Albouy A, Kaloshin V. 2012. Finiteness of central configurations of five bodies in the plane. Annals of Mathematics. 176(1), 535–588.","ama":"Albouy A, Kaloshin V. Finiteness of central configurations of five bodies in the plane. Annals of Mathematics. 2012;176(1):535-588. doi:10.4007/annals.2012.176.1.10"},"publication":"Annals of Mathematics"},{"abstract":[{"text":"A subject of extensive study in evolutionary theory has been the issue of how neutral, redundant copies can be maintained in the genome for long periods of time. Concurrently, examples of adaptive gene duplications to various environmental conditions in different species have been described. At this point, it is too early to tell whether or not a substantial fraction of gene copies have initially achieved fixation by positive selection for increased dosage. Nevertheless, enough examples have accumulated in the literature that such a possibility should be considered. Here, I review the recent examples of adaptive gene duplications and make an attempt to draw generalizations on what types of genes may be particularly prone to be selected for under certain environmental conditions. The identification of copy-number variation in ecological field studies of species adapting to stressful or novel environmental conditions may improve our understanding of gene duplications as a mechanism of adaptation and its relevance to the long-term persistence of gene duplications.","lang":"eng"}],"publist_id":"6765","issue":"1749","license":"https://creativecommons.org/licenses/by/4.0/","extern":1,"type":"journal_article","author":[{"orcid":"0000-0001-8243-4694","id":"44FDEF62-F248-11E8-B48F-1D18A9856A87","last_name":"Kondrashov","first_name":"Fyodor","full_name":"Fyodor Kondrashov"}],"date_updated":"2021-01-12T08:21:16Z","date_created":"2018-12-11T11:49:01Z","volume":279,"_id":"887","acknowledgement":"The work was supported by a Plan Nacional grant no. BFU2009-09271 from the Spanish Ministry of Science and Innovation. The author is a European Molecular Biology Organization Young Investigator and Howard Hughes Medical Institute International Early Career Scientist.","year":"2012","publication_status":"published","status":"public","title":"Gene duplication as a mechanism of genomic adaptation to a changing environment","publisher":"Royal Society, The","intvolume":" 279","day":"01","month":"01","date_published":"2012-01-01T00:00:00Z","doi":"10.1098/rspb.2012.1108","publication":"Proceedings of the Royal Society of London Series B Biological Sciences","citation":{"ista":"Kondrashov F. 2012. Gene duplication as a mechanism of genomic adaptation to a changing environment. Proceedings of the Royal Society of London Series B Biological Sciences. 279(1749), 5048–5057.","ieee":"F. Kondrashov, “Gene duplication as a mechanism of genomic adaptation to a changing environment,” Proceedings of the Royal Society of London Series B Biological Sciences, vol. 279, no. 1749. Royal Society, The, pp. 5048–5057, 2012.","apa":"Kondrashov, F. (2012). Gene duplication as a mechanism of genomic adaptation to a changing environment. Proceedings of the Royal Society of London Series B Biological Sciences. Royal Society, The. https://doi.org/10.1098/rspb.2012.1108","ama":"Kondrashov F. Gene duplication as a mechanism of genomic adaptation to a changing environment. Proceedings of the Royal Society of London Series B Biological Sciences. 2012;279(1749):5048-5057. doi:10.1098/rspb.2012.1108","chicago":"Kondrashov, Fyodor. “Gene Duplication as a Mechanism of Genomic Adaptation to a Changing Environment.” Proceedings of the Royal Society of London Series B Biological Sciences. Royal Society, The, 2012. https://doi.org/10.1098/rspb.2012.1108.","mla":"Kondrashov, Fyodor. “Gene Duplication as a Mechanism of Genomic Adaptation to a Changing Environment.” Proceedings of the Royal Society of London Series B Biological Sciences, vol. 279, no. 1749, Royal Society, The, 2012, pp. 5048–57, doi:10.1098/rspb.2012.1108.","short":"F. Kondrashov, Proceedings of the Royal Society of London Series B Biological Sciences 279 (2012) 5048–5057."},"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"quality_controlled":0,"page":"5048 - 5057"},{"citation":{"chicago":"Palacci, Jérémie A, Cécile Cottin-Bizonne, Christophe Ybert, and Lydéric Bocquet. “Osmotic Traps for Colloids and Macromolecules Based on Logarithmic Sensing in Salt Taxis.” Soft Matter. Royal Society of Chemistry, 2012. https://doi.org/10.1039/c1sm06395b.","mla":"Palacci, Jérémie A., et al. “Osmotic Traps for Colloids and Macromolecules Based on Logarithmic Sensing in Salt Taxis.” Soft Matter, vol. 8, no. 4, Royal Society of Chemistry, 2012, pp. 980–94, doi:10.1039/c1sm06395b.","short":"J.A. Palacci, C. Cottin-Bizonne, C. Ybert, L. Bocquet, Soft Matter 8 (2012) 980–994.","ista":"Palacci JA, Cottin-Bizonne C, Ybert C, Bocquet L. 2012. Osmotic traps for colloids and macromolecules based on logarithmic sensing in salt taxis. Soft Matter. 8(4), 980–994.","ieee":"J. A. Palacci, C. Cottin-Bizonne, C. Ybert, and L. Bocquet, “Osmotic traps for colloids and macromolecules based on logarithmic sensing in salt taxis,” Soft Matter, vol. 8, no. 4. Royal Society of Chemistry, pp. 980–994, 2012.","apa":"Palacci, J. A., Cottin-Bizonne, C., Ybert, C., & Bocquet, L. (2012). Osmotic traps for colloids and macromolecules based on logarithmic sensing in salt taxis. Soft Matter. Royal Society of Chemistry. https://doi.org/10.1039/c1sm06395b","ama":"Palacci JA, Cottin-Bizonne C, Ybert C, Bocquet L. Osmotic traps for colloids and macromolecules based on logarithmic sensing in salt taxis. Soft Matter. 2012;8(4):980-994. doi:10.1039/c1sm06395b"},"publication":"Soft Matter","page":"980-994","quality_controlled":"1","article_type":"original","doi":"10.1039/c1sm06395b","date_published":"2012-01-28T00:00:00Z","language":[{"iso":"eng"}],"scopus_import":"1","article_processing_charge":"No","publication_identifier":{"eissn":["1744-6848"],"issn":["1744-683X"]},"month":"01","day":"28","_id":"9049","user_id":"D865714E-FA4E-11E9-B85B-F5C5E5697425","year":"2012","publisher":"Royal Society of Chemistry","intvolume":" 8","publication_status":"published","status":"public","title":"Osmotic traps for colloids and macromolecules based on logarithmic sensing in salt taxis","author":[{"id":"8fb92548-2b22-11eb-b7c1-a3f0d08d7c7d","orcid":"0000-0002-7253-9465","first_name":"Jérémie A","last_name":"Palacci","full_name":"Palacci, Jérémie A"},{"full_name":"Cottin-Bizonne, Cécile","first_name":"Cécile","last_name":"Cottin-Bizonne"},{"first_name":"Christophe","last_name":"Ybert","full_name":"Ybert, Christophe"},{"full_name":"Bocquet, Lydéric","first_name":"Lydéric","last_name":"Bocquet"}],"oa_version":"None","volume":8,"date_created":"2021-02-01T13:43:10Z","date_updated":"2023-02-23T13:47:31Z","type":"journal_article","issue":"4","abstract":[{"text":"Diffusiophoretic motion of colloids and macromolecules under salt gradients exhibits a logarithmic-sensing, i.e. the particle velocity is proportional to the spatial gradient of the logarithm of the salt concentration, as VDP = DDP∇logc. Here we explore experimentally the implications of this log-sensing behavior, on the basis of a hydrogel microfluidic device allowing to build spatially and temporally controlled gradients. We first demonstrate that the non-linearity of the salt-taxis leads to a trapping of particles under concentration gradient oscillations via a rectification of the motion. As an alternative, we make use of the high sensitivity of diffusiophoretic migration to vanishing salt concentration due to the log-sensing: in a counter-intuitive way, a vanishing gradient can lead to measurable velocity provided that the solute concentration is low enough, thus keeping ∇c/c finite. We show that this leads to a strong segregation of particles in osmotic shock configuration, resulting from a step change of the salt concentration at the boundaries. These various phenomena are rationalized on the basis of a theoretical description for the time-dependent Smoluchowski equation for the colloidal density.","lang":"eng"}],"extern":"1"},{"language":[{"iso":"eng"}],"date_published":"2012-07-03T00:00:00Z","doi":"10.1103/PhysRevLett.109.018101","external_id":{"arxiv":["1207.1516"]},"citation":{"ama":"Hannezo EB, Prost J, Joanny J. Mechanical instabilities of biological tubes. Physical Review Letters. 2012;109(1). doi:10.1103/PhysRevLett.109.018101","ista":"Hannezo EB, Prost J, Joanny J. 2012. Mechanical instabilities of biological tubes. Physical Review Letters. 109(1).","ieee":"E. B. Hannezo, J. Prost, and J. Joanny, “Mechanical instabilities of biological tubes,” Physical Review Letters, vol. 109, no. 1. American Physical Society, 2012.","apa":"Hannezo, E. B., Prost, J., & Joanny, J. (2012). Mechanical instabilities of biological tubes. Physical Review Letters. American Physical Society. https://doi.org/10.1103/PhysRevLett.109.018101","mla":"Hannezo, Edouard B., et al. “Mechanical Instabilities of Biological Tubes.” Physical Review Letters, vol. 109, no. 1, American Physical Society, 2012, doi:10.1103/PhysRevLett.109.018101.","short":"E.B. Hannezo, J. Prost, J. Joanny, Physical Review Letters 109 (2012).","chicago":"Hannezo, Edouard B, Jacques Prost, and Jean Joanny. “Mechanical Instabilities of Biological Tubes.” Physical Review Letters. American Physical Society, 2012. https://doi.org/10.1103/PhysRevLett.109.018101."},"oa":1,"main_file_link":[{"url":"https://arxiv.org/abs/1207.1516","open_access":"1"}],"publication":"Physical Review Letters","article_processing_charge":"No","day":"03","month":"07","volume":109,"oa_version":"Preprint","date_created":"2018-12-11T11:49:13Z","date_updated":"2021-01-12T08:21:56Z","author":[{"id":"3A9DB764-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-6005-1561","first_name":"Edouard B","last_name":"Hannezo","full_name":"Hannezo, Edouard B"},{"first_name":"Jacques","last_name":"Prost","full_name":"Prost, Jacques"},{"full_name":"Joanny, Jean","last_name":"Joanny","first_name":"Jean"}],"publisher":"American Physical Society","intvolume":" 109","title":"Mechanical instabilities of biological tubes","status":"public","publication_status":"published","_id":"922","year":"2012","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","extern":"1","issue":"1","publist_id":"6519","abstract":[{"text":"We study theoretically the morphologies of biological tubes affected by various pathologies. When epithelial cells grow, the negative tension produced by their division provokes a buckling instability. Several shapes are investigated: varicose, dilated, sinuous, or sausagelike. They are all found in pathologies of tracheal, renal tubes, or arteries. The final shape depends crucially on the mechanical parameters of the tissues: Young's modulus, wall-to-lumen ratio, homeostatic pressure. We argue that since tissues must be in quasistatic mechanical equilibrium, abnormal shapes convey information as to what causes the pathology. We calculate a phase diagram of tubular instabilities which could be a helpful guide for investigating the underlying genetic regulation.","lang":"eng"}],"type":"journal_article"},{"type":"journal_article","abstract":[{"lang":"eng","text":"EMBRYONIC FLOWER1 (EMF1) is a plant-specific gene crucial to Arabidopsis vegetative development. Loss of function mutants in the EMF1 gene mimic the phenotype caused by mutations in Polycomb Group protein (PcG) genes, which encode epigenetic repressors that regulate many aspects of eukaryotic development. In Arabidopsis, Polycomb Repressor Complex 2 (PRC2), made of PcG proteins, catalyzes trimethylation of lysine 27 on histone H3 (H3K27me3) and PRC1-like proteins catalyze H2AK119 ubiquitination. Despite functional similarity to PcG proteins, EMF1 lacks sequence homology with known PcG proteins; thus, its role in the PcG mechanism is unclear. To study the EMF1 functions and its mechanism of action, we performed genome-wide mapping of EMF1 binding and H3K27me3 modification sites in Arabidopsis seedlings. The EMF1 binding pattern is similar to that of H3K27me3 modification on the chromosomal and genic level. ChIPOTLe peak finding and clustering analyses both show that the highly trimethylated genes also have high enrichment levels of EMF1 binding, termed EMF1_K27 genes. EMF1 interacts with regulatory genes, which are silenced to allow vegetative growth, and with genes specifying cell fates during growth and differentiation. H3K27me3 marks not only these genes but also some genes that are involved in endosperm development and maternal effects. Transcriptome analysis, coupled with the H3K27me3 pattern, of EMF1_K27 genes in emf1 and PRC2 mutants showed that EMF1 represses gene activities via diverse mechanisms and plays a novel role in the PcG mechanism."}],"issue":"3","status":"public","title":"EMF1 and PRC2 cooperate to repress key regulators of Arabidopsis development","intvolume":" 8","_id":"9499","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","oa_version":"Published Version","scopus_import":"1","day":"22","article_processing_charge":"No","article_type":"original","publication":"PLoS Genetics","citation":{"chicago":"Kim, Sang Yeol, Jungeun Lee, Leor Eshed-Williams, Daniel Zilberman, and Z. Renee Sung. “EMF1 and PRC2 Cooperate to Repress Key Regulators of Arabidopsis Development.” PLoS Genetics. Public Library of Science, 2012. https://doi.org/10.1371/journal.pgen.1002512.","short":"S.Y. Kim, J. Lee, L. Eshed-Williams, D. Zilberman, Z.R. Sung, PLoS Genetics 8 (2012).","mla":"Kim, Sang Yeol, et al. “EMF1 and PRC2 Cooperate to Repress Key Regulators of Arabidopsis Development.” PLoS Genetics, vol. 8, no. 3, e1002512, Public Library of Science, 2012, doi:10.1371/journal.pgen.1002512.","apa":"Kim, S. Y., Lee, J., Eshed-Williams, L., Zilberman, D., & Sung, Z. R. (2012). EMF1 and PRC2 cooperate to repress key regulators of Arabidopsis development. PLoS Genetics. Public Library of Science. https://doi.org/10.1371/journal.pgen.1002512","ieee":"S. Y. Kim, J. Lee, L. Eshed-Williams, D. Zilberman, and Z. R. Sung, “EMF1 and PRC2 cooperate to repress key regulators of Arabidopsis development,” PLoS Genetics, vol. 8, no. 3. Public Library of Science, 2012.","ista":"Kim SY, Lee J, Eshed-Williams L, Zilberman D, Sung ZR. 2012. EMF1 and PRC2 cooperate to repress key regulators of Arabidopsis development. PLoS Genetics. 8(3), e1002512.","ama":"Kim SY, Lee J, Eshed-Williams L, Zilberman D, Sung ZR. EMF1 and PRC2 cooperate to repress key regulators of Arabidopsis development. PLoS Genetics. 2012;8(3). doi:10.1371/journal.pgen.1002512"},"date_published":"2012-03-22T00:00:00Z","article_number":"e1002512","extern":"1","publication_status":"published","publisher":"Public Library of Science","department":[{"_id":"DaZi"}],"year":"2012","pmid":1,"date_created":"2021-06-07T11:07:56Z","date_updated":"2021-12-14T08:31:14Z","volume":8,"author":[{"full_name":"Kim, Sang Yeol","first_name":"Sang Yeol","last_name":"Kim"},{"last_name":"Lee","first_name":"Jungeun","full_name":"Lee, Jungeun"},{"first_name":"Leor","last_name":"Eshed-Williams","full_name":"Eshed-Williams, Leor"},{"first_name":"Daniel","last_name":"Zilberman","id":"6973db13-dd5f-11ea-814e-b3e5455e9ed1","orcid":"0000-0002-0123-8649","full_name":"Zilberman, Daniel"},{"full_name":"Sung, Z. Renee","last_name":"Sung","first_name":"Z. Renee"}],"month":"03","publication_identifier":{"issn":["1553-7390"],"eissn":["1553-7404"]},"quality_controlled":"1","external_id":{"pmid":["22457632"]},"oa":1,"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1371/journal.pgen.1002512"}],"language":[{"iso":"eng"}],"doi":"10.1371/journal.pgen.1002512"},{"month":"10","publication_identifier":{"issn":["1553-7390"],"eissn":["1553-7404"]},"language":[{"iso":"eng"}],"doi":"10.1371/journal.pgen.1002988","quality_controlled":"1","main_file_link":[{"url":"https://doi.org/10.1371/journal.pgen.1002988","open_access":"1"}],"oa":1,"external_id":{"pmid":["23071449"]},"extern":"1","article_number":"e1002988","date_updated":"2021-12-14T08:29:57Z","date_created":"2021-06-07T10:55:27Z","volume":8,"author":[{"first_name":"Devin","last_name":"Coleman-Derr","full_name":"Coleman-Derr, Devin"},{"last_name":"Zilberman","first_name":"Daniel","orcid":"0000-0002-0123-8649","id":"6973db13-dd5f-11ea-814e-b3e5455e9ed1","full_name":"Zilberman, Daniel"}],"publication_status":"published","publisher":"Public Library of Science","department":[{"_id":"DaZi"}],"year":"2012","pmid":1,"day":"11","article_processing_charge":"No","scopus_import":"1","date_published":"2012-10-11T00:00:00Z","article_type":"original","publication":"PLoS Genetics","citation":{"ama":"Coleman-Derr D, Zilberman D. Deposition of histone variant H2A.Z within gene bodies regulates responsive genes. PLoS Genetics. 2012;8(10). doi:10.1371/journal.pgen.1002988","ista":"Coleman-Derr D, Zilberman D. 2012. Deposition of histone variant H2A.Z within gene bodies regulates responsive genes. PLoS Genetics. 8(10), e1002988.","ieee":"D. Coleman-Derr and D. Zilberman, “Deposition of histone variant H2A.Z within gene bodies regulates responsive genes,” PLoS Genetics, vol. 8, no. 10. Public Library of Science, 2012.","apa":"Coleman-Derr, D., & Zilberman, D. (2012). Deposition of histone variant H2A.Z within gene bodies regulates responsive genes. PLoS Genetics. Public Library of Science. https://doi.org/10.1371/journal.pgen.1002988","mla":"Coleman-Derr, Devin, and Daniel Zilberman. “Deposition of Histone Variant H2A.Z within Gene Bodies Regulates Responsive Genes.” PLoS Genetics, vol. 8, no. 10, e1002988, Public Library of Science, 2012, doi:10.1371/journal.pgen.1002988.","short":"D. Coleman-Derr, D. Zilberman, PLoS Genetics 8 (2012).","chicago":"Coleman-Derr, Devin, and Daniel Zilberman. “Deposition of Histone Variant H2A.Z within Gene Bodies Regulates Responsive Genes.” PLoS Genetics. Public Library of Science, 2012. https://doi.org/10.1371/journal.pgen.1002988."},"abstract":[{"lang":"eng","text":"The regulation of eukaryotic chromatin relies on interactions between many epigenetic factors, including histone modifications, DNA methylation, and the incorporation of histone variants. H2A.Z, one of the most conserved but enigmatic histone variants that is enriched at the transcriptional start sites of genes, has been implicated in a variety of chromosomal processes. Recently, we reported a genome-wide anticorrelation between H2A.Z and DNA methylation, an epigenetic hallmark of heterochromatin that has also been found in the bodies of active genes in plants and animals. Here, we investigate the basis of this anticorrelation using a novel h2a.z loss-of-function line in Arabidopsis thaliana. Through genome-wide bisulfite sequencing, we demonstrate that loss of H2A.Z in Arabidopsis has only a minor effect on the level or profile of DNA methylation in genes, and we propose that the global anticorrelation between DNA methylation and H2A.Z is primarily caused by the exclusion of H2A.Z from methylated DNA. RNA sequencing and genomic mapping of H2A.Z show that H2A.Z enrichment across gene bodies, rather than at the TSS, is correlated with lower transcription levels and higher measures of gene responsiveness. Loss of H2A.Z causes misregulation of many genes that are disproportionately associated with response to environmental and developmental stimuli. We propose that H2A.Z deposition in gene bodies promotes variability in levels and patterns of gene expression, and that a major function of genic DNA methylation is to exclude H2A.Z from constitutively expressed genes."}],"issue":"10","type":"journal_article","oa_version":"Published Version","title":"Deposition of histone variant H2A.Z within gene bodies regulates responsive genes","status":"public","intvolume":" 8","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","_id":"9497"},{"extern":"1","volume":22,"date_updated":"2021-12-14T08:32:38Z","date_created":"2021-06-08T08:58:52Z","author":[{"full_name":"Huff, Jason T.","last_name":"Huff","first_name":"Jason T."},{"id":"6973db13-dd5f-11ea-814e-b3e5455e9ed1","orcid":"0000-0002-0123-8649","first_name":"Daniel","last_name":"Zilberman","full_name":"Zilberman, Daniel"}],"department":[{"_id":"DaZi"}],"publisher":"Elsevier","publication_status":"published","pmid":1,"year":"2012","publication_identifier":{"issn":["0959-437X"]},"month":"04","language":[{"iso":"eng"}],"doi":"10.1016/j.gde.2012.01.007","quality_controlled":"1","external_id":{"pmid":["22336527"]},"issue":"2","abstract":[{"lang":"eng","text":"Accumulating evidence points toward diverse functions for plant chromatin. Remarkable progress has been made over the last few years in elucidating the mechanisms for a number of these functions. Activity of the histone demethylase IBM1 accurately targets DNA methylation to silent repeats and transposable elements, not to genes. A genetic screen uncovered the surprising role of H2A.Z-containing nucleosomes in sensing precise differences in ambient temperature and consequent gene regulation. Precise maintenance of chromosome number is assured by a histone modification that suppresses inappropriate DNA replication and by centromeric histone H3 regulation of chromosome segregation. Histones and noncoding RNAs regulate FLOWERING LOCUS C, the expression of which quantitatively measures the duration of cold exposure, functioning as memory of winter. These findings are a testament to the power of using plants to research chromatin organization, and demonstrate examples of how chromatin functions to achieve biological accuracy, precision, and memory."}],"type":"journal_article","oa_version":"None","intvolume":" 22","status":"public","title":"Regulation of biological accuracy, precision, and memory by plant chromatin organization","_id":"9528","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","article_processing_charge":"No","scopus_import":"1","date_published":"2012-04-01T00:00:00Z","page":"132-138","article_type":"review","citation":{"ista":"Huff JT, Zilberman D. 2012. Regulation of biological accuracy, precision, and memory by plant chromatin organization. Current Opinion in Genetics and Development. 22(2), 132–138.","ieee":"J. T. Huff and D. Zilberman, “Regulation of biological accuracy, precision, and memory by plant chromatin organization,” Current Opinion in Genetics and Development, vol. 22, no. 2. Elsevier, pp. 132–138, 2012.","apa":"Huff, J. T., & Zilberman, D. (2012). Regulation of biological accuracy, precision, and memory by plant chromatin organization. Current Opinion in Genetics and Development. Elsevier. https://doi.org/10.1016/j.gde.2012.01.007","ama":"Huff JT, Zilberman D. Regulation of biological accuracy, precision, and memory by plant chromatin organization. Current Opinion in Genetics and Development. 2012;22(2):132-138. doi:10.1016/j.gde.2012.01.007","chicago":"Huff, Jason T., and Daniel Zilberman. “Regulation of Biological Accuracy, Precision, and Memory by Plant Chromatin Organization.” Current Opinion in Genetics and Development. Elsevier, 2012. https://doi.org/10.1016/j.gde.2012.01.007.","mla":"Huff, Jason T., and Daniel Zilberman. “Regulation of Biological Accuracy, Precision, and Memory by Plant Chromatin Organization.” Current Opinion in Genetics and Development, vol. 22, no. 2, Elsevier, 2012, pp. 132–38, doi:10.1016/j.gde.2012.01.007.","short":"J.T. Huff, D. Zilberman, Current Opinion in Genetics and Development 22 (2012) 132–138."},"publication":"Current Opinion in Genetics and Development"},{"extern":1,"publist_id":"6431","issue":"22","abstract":[{"lang":"eng","text":"Motivated by recent experiments on Ba3NiSb2O 9, we investigate possible quantum spin liquid ground states for spin S=1 Heisenberg models on the triangular lattice. We use variational Monte Carlo techniques to calculate the energies of microscopic spin liquid wave functions where spin is represented by three flavors of fermionic spinon operators. These energies are compared with the energies of various competing three-sublattice ordered states. Our approach shows that the antiferromagnetic Heisenberg model with biquadratic term and single-ion anisotropy does not have a low-temperature spin liquid phase. However, for an SU(3)-invariant model with sufficiently strong ring-exchange terms, we find a paired chiral quantum spin liquid with a Fermi surface of deconfined spinons that is stable against all types of ordering patterns we considered. We discuss the physics of this exotic spin liquid state in relation to the recent experiment and suggest new ways to test this scenario."}],"type":"journal_article","volume":86,"date_created":"2018-12-11T11:49:27Z","date_updated":"2021-01-12T08:22:18Z","author":[{"last_name":"Bieri","first_name":"Samuel","full_name":"Bieri, Samuel"},{"last_name":"Serbyn","first_name":"Maksym","orcid":"0000-0002-2399-5827","id":"47809E7E-F248-11E8-B48F-1D18A9856A87","full_name":"Maksym Serbyn"},{"last_name":"Senthil","first_name":"Todadri","full_name":"Senthil, Todadri S"},{"last_name":"Lee","first_name":"Patrick","full_name":"Lee, Patrick"}],"intvolume":" 86","publisher":"American Physical Society","title":"Paired chiral spin liquid with a Fermi surface in S=1 model on the triangular lattice","publication_status":"published","status":"public","acknowledgement":"We thank Kuang-Ting Chen, Rebecca Flint, Dmitri Ivanov, Z.-X. Liu, Tai-Kai Ng, Lara Thompson, Tamás Tóth, and Fa Wang for helpful discussions. T.S. is supported by NSF DMR 1005434. P.A.L. is supported by NSF DMR 1104498. S.B. acknowledges support from the Swiss National Science Foundation (SNSF).","_id":"966","year":"2012","day":"13","month":"12","doi":"10.1103/PhysRevB.86.224409","date_published":"2012-12-13T00:00:00Z","quality_controlled":0,"citation":{"ama":"Bieri S, Serbyn M, Senthil T, Lee P. Paired chiral spin liquid with a Fermi surface in S=1 model on the triangular lattice. Physical Review B - Condensed Matter and Materials Physics. 2012;86(22). doi:10.1103/PhysRevB.86.224409","apa":"Bieri, S., Serbyn, M., Senthil, T., & Lee, P. (2012). Paired chiral spin liquid with a Fermi surface in S=1 model on the triangular lattice. Physical Review B - Condensed Matter and Materials Physics. American Physical Society. https://doi.org/10.1103/PhysRevB.86.224409","ieee":"S. Bieri, M. Serbyn, T. Senthil, and P. Lee, “Paired chiral spin liquid with a Fermi surface in S=1 model on the triangular lattice,” Physical Review B - Condensed Matter and Materials Physics, vol. 86, no. 22. American Physical Society, 2012.","ista":"Bieri S, Serbyn M, Senthil T, Lee P. 2012. Paired chiral spin liquid with a Fermi surface in S=1 model on the triangular lattice. Physical Review B - Condensed Matter and Materials Physics. 86(22).","short":"S. Bieri, M. Serbyn, T. Senthil, P. Lee, Physical Review B - Condensed Matter and Materials Physics 86 (2012).","mla":"Bieri, Samuel, et al. “Paired Chiral Spin Liquid with a Fermi Surface in S=1 Model on the Triangular Lattice.” Physical Review B - Condensed Matter and Materials Physics, vol. 86, no. 22, American Physical Society, 2012, doi:10.1103/PhysRevB.86.224409.","chicago":"Bieri, Samuel, Maksym Serbyn, Todadri Senthil, and Patrick Lee. “Paired Chiral Spin Liquid with a Fermi Surface in S=1 Model on the Triangular Lattice.” Physical Review B - Condensed Matter and Materials Physics. American Physical Society, 2012. https://doi.org/10.1103/PhysRevB.86.224409."},"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1208.3231"}],"oa":1,"publication":"Physical Review B - Condensed Matter and Materials Physics"},{"citation":{"ama":"Lohse K, Barton NH, Melika G, Stone G. A likelihood based comparison of population histories in a parasitoid guild. Molecular Ecology. 2012;21(18):4605-4617. doi:10.1111/j.1365-294X.2012.05700.x","apa":"Lohse, K., Barton, N. H., Melika, G., & Stone, G. (2012). A likelihood based comparison of population histories in a parasitoid guild. Molecular Ecology. Wiley-Blackwell. https://doi.org/10.1111/j.1365-294X.2012.05700.x","ieee":"K. Lohse, N. H. Barton, G. Melika, and G. Stone, “A likelihood based comparison of population histories in a parasitoid guild,” Molecular Ecology, vol. 21, no. 18. Wiley-Blackwell, pp. 4605–4617, 2012.","ista":"Lohse K, Barton NH, Melika G, Stone G. 2012. A likelihood based comparison of population histories in a parasitoid guild. Molecular Ecology. 21(18), 4605–4617.","short":"K. Lohse, N.H. Barton, G. Melika, G. Stone, Molecular Ecology 21 (2012) 4605–4617.","mla":"Lohse, Konrad, et al. “A Likelihood Based Comparison of Population Histories in a Parasitoid Guild.” Molecular Ecology, vol. 21, no. 18, Wiley-Blackwell, 2012, pp. 4605–17, doi:10.1111/j.1365-294X.2012.05700.x.","chicago":"Lohse, Konrad, Nicholas H Barton, George Melika, and Graham Stone. “A Likelihood Based Comparison of Population Histories in a Parasitoid Guild.” Molecular Ecology. Wiley-Blackwell, 2012. https://doi.org/10.1111/j.1365-294X.2012.05700.x."},"publication":"Molecular Ecology","page":"4605 - 4617","date_published":"2012-09-01T00:00:00Z","scopus_import":1,"has_accepted_license":"1","day":"01","_id":"2968","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","intvolume":" 21","ddc":["570","579"],"status":"public","title":"A likelihood based comparison of population histories in a parasitoid guild","pubrep_id":"296","oa_version":"Submitted Version","file":[{"checksum":"c14ee4cb2a8ba9575bfd8a9bb7a883bb","date_created":"2018-12-12T10:17:47Z","date_updated":"2020-07-14T12:45:57Z","relation":"main_file","file_id":"5304","content_type":"application/pdf","file_size":235820,"creator":"system","access_level":"open_access","file_name":"IST-2014-296-v1+1_4_wasps_revised3.pdf"},{"checksum":"f00afc5b887c8222014b57375b8caece","date_created":"2018-12-12T10:17:48Z","date_updated":"2020-07-14T12:45:57Z","file_id":"5305","relation":"main_file","creator":"system","file_size":41975,"content_type":"application/pdf","access_level":"open_access","file_name":"IST-2014-296-v1+2_4_wasps_Supporting2.pdf"}],"type":"journal_article","issue":"18","abstract":[{"text":"Little is known about the stability of trophic relationships in complex natural communities over evolutionary timescales. Here, we use sequence data from 18 nuclear loci to reconstruct and compare the intraspecific histories of major Pleistocene refugial populations in the Middle East, the Balkans and Iberia in a guild of four Chalcid parasitoids (Cecidostiba fungosa, Cecidostiba semifascia, Hobbya stenonota and Mesopolobus amaenus) all attacking Cynipid oak galls. We develop a likelihood method to numerically estimate models of divergence between three populations from multilocus data. We investigate the power of this framework on simulated data, and-using triplet alignments of intronic loci-quantify the support for all possible divergence relationships between refugial populations in the four parasitoids. Although an East to West order of population divergence has highest support in all but one species, we cannot rule out alternative population tree topologies. Comparing the estimated times of population splits between species, we find that one species, M. amaenus, has a significantly older history than the rest of the guild and must have arrived in central Europe at least one glacial cycle prior to other guild members. This suggests that although all four species may share a common origin in the East, they expanded westwards into Europe at different times. © 2012 Blackwell Publishing Ltd.","lang":"eng"}],"oa":1,"project":[{"grant_number":"250152","_id":"25B07788-B435-11E9-9278-68D0E5697425","name":"Limits to selection in biology and in evolutionary computation","call_identifier":"FP7"}],"quality_controlled":"1","doi":"10.1111/j.1365-294X.2012.05700.x","language":[{"iso":"eng"}],"month":"09","year":"2012","acknowledgement":"This work was supported by funding from the UK Natural Environment Research Council to KL (NE/I020288/1) and GS (NE/H000038/1, NE/E014453/1, NER/B/504406/1, NER/B/S2003/00856) and a grant from the European Research Council (250152) to NB.\r\nWe thank Majide Tavakoli, Juli Pujade-Villar and Pablo-Fuentes Utrilla for contributing specimens. Mike Hickerson and three anonymous reviewers gave helpful comments on earlier versions of the manuscript. 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Here, we use sequence data from 18 nuclear loci to reconstruct and compare the intraspecific histories of major Pleistocene refugial populations in the Middle East, the Balkans and Iberia in a guild of four Chalcid parasitoids (Cecidostiba fungosa, C. semifascia, Hobbya stenonota and Mesopolobus amaenus) all attacking Cynipid oak galls. We develop a likelihood method to numerically estimate models of divergence between three populations from multilocus data. We investigate the power of this framework on simulated data, and - using triplet alignments of intronic loci - quantify the support for all possible divergence relationships between refugial populations in the four parasitoids. Although an East to West order of population divergence has highest support in all but one species, we cannot rule out alternative population tree topologies. Comparing the estimated times of population splits between species, we find that one species, M. amaenus, has a significantly older history than the rest of the guild and must have arrived in central Europe at least one glacial cycle prior to other guild members. This suggests that although all four species may share a common origin in the East, they expanded westwards into Europe at different times."}],"license":"https://creativecommons.org/publicdomain/zero/1.0/","type":"research_data_reference","doi":"10.5061/DRYAD.0G0FS","date_published":"2012-06-08T00:00:00Z","tmp":{"short":"CC0 (1.0)","image":"/images/cc_0.png","legal_code_url":"https://creativecommons.org/publicdomain/zero/1.0/legalcode","name":"Creative Commons Public Domain Dedication (CC0 1.0)"},"oa":1,"citation":{"ista":"Lohse K, Barton NH, Stone G, Melika G. 2012. Data from: A likelihood-based comparison of population histories in a parasitoid guild, Dryad, 10.5061/DRYAD.0G0FS.","apa":"Lohse, K., Barton, N. 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The dynamic self-assembly of thin films of the dual-responsive nanoparticles induces attractive interactions between diamagnetic particles. We demonstrate that catalytic amounts of the dual-responsive nanoparticles are sufficient to magnetically guide and deliver the diamagnetic particles to desired locations, where they can then be released by disassembling the dynamic layers of superparamagnetic nanoparticles with visible light.","lang":"eng"}],"issue":"48","external_id":{"pmid":["23181449"]},"quality_controlled":"1","doi":"10.1021/ja309633v","language":[{"iso":"eng"}],"month":"11","publication_identifier":{"eissn":["1520-5126"],"issn":["0002-7863"]},"year":"2012","pmid":1,"publication_status":"published","publisher":"American Chemical Society","author":[{"first_name":"Olga","last_name":"Chovnik","full_name":"Chovnik, Olga"},{"last_name":"Balgley","first_name":"Renata","full_name":"Balgley, Renata"},{"first_name":"Joel R.","last_name":"Goldman","full_name":"Goldman, Joel R."},{"last_name":"Klajn","first_name":"Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","full_name":"Klajn, Rafal"}],"date_created":"2023-08-01T09:47:42Z","date_updated":"2023-08-08T07:51:10Z","volume":134,"extern":"1"},{"month":"03","publication_identifier":{"eissn":["1613-6829"],"issn":["1613-6810"]},"quality_controlled":"1","external_id":{"pmid":["22392681"]},"language":[{"iso":"eng"}],"doi":"10.1002/smll.201101882","extern":"1","publication_status":"published","publisher":"Wiley","year":"2012","pmid":1,"date_created":"2023-08-01T09:47:55Z","date_updated":"2023-08-08T07:55:10Z","volume":8,"author":[{"last_name":"Ridelman","first_name":"Yonatan","full_name":"Ridelman, Yonatan"},{"last_name":"Singh","first_name":"Gurvinder","full_name":"Singh, Gurvinder"},{"full_name":"Popovitz-Biro, Ronit","first_name":"Ronit","last_name":"Popovitz-Biro"},{"last_name":"Wolf","first_name":"Sharon G.","full_name":"Wolf, Sharon G."},{"first_name":"Sanjib","last_name":"Das","full_name":"Das, Sanjib"},{"id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","last_name":"Klajn","first_name":"Rafal","full_name":"Klajn, Rafal"}],"keyword":["Biomaterials","Biotechnology","General Materials Science","General Chemistry"],"scopus_import":"1","day":"12","article_processing_charge":"No","article_type":"original","page":"654-660","publication":"Small","citation":{"ista":"Ridelman Y, Singh G, Popovitz-Biro R, Wolf SG, Das S, Klajn R. 2012. 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Wiley, 2012. https://doi.org/10.1002/smll.201101882.","mla":"Ridelman, Yonatan, et al. “Metallic Nanobowls by Galvanic Replacement Reaction on Heterodimeric Nanoparticles.” Small, vol. 8, no. 5, Wiley, 2012, pp. 654–60, doi:10.1002/smll.201101882.","short":"Y. Ridelman, G. Singh, R. Popovitz-Biro, S.G. Wolf, S. Das, R. Klajn, Small 8 (2012) 654–660."},"date_published":"2012-03-12T00:00:00Z","type":"journal_article","abstract":[{"lang":"eng","text":"Well-defined metallic nanobowls can be prepared by extending the concept of a protecting group to colloidal synthesis. Magnetic nanoparticles are employed as “protecting groups” during the galvanic replacement of silver with gold. The replacement reaction is accompanied by spontantous dissociation of the protecting groups, leaving behind metallic nanobowls."}],"issue":"5","status":"public","title":"Metallic nanobowls by galvanic replacement reaction on heterodimeric nanoparticles","intvolume":" 8","_id":"13408","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"None"},{"author":[{"first_name":"Ahmed","last_name":"Bouajjani","full_name":"Bouajjani, Ahmed"},{"full_name":"Dragoi, Cezara","id":"2B2B5ED0-F248-11E8-B48F-1D18A9856A87","first_name":"Cezara","last_name":"Dragoi"},{"last_name":"Enea","first_name":"Constantin","full_name":"Enea, Constantin"},{"full_name":"Sighireanu, Mihaela","last_name":"Sighireanu","first_name":"Mihaela"}],"date_updated":"2023-09-05T14:07:24Z","date_created":"2022-03-21T07:58:39Z","volume":7561,"acknowledgement":"This work has been partially supported by the French ANR project Veridyc","year":"2012","publication_status":"published","department":[{"_id":"ToHe"}],"publisher":"Springer","place":"Berlin, Heidelberg","conference":{"start_date":"2012-10-03","location":"Thiruvananthapuram, India","end_date":"2012-10-06","name":"ATVA: Automated Technology for Verification and Analysis"},"doi":"10.1007/978-3-642-33386-6_14","language":[{"iso":"eng"}],"quality_controlled":"1","month":"10","publication_identifier":{"isbn":["9783642333859"],"eissn":["1611-3349"],"eisbn":["9783642333866"],"issn":["0302-9743"]},"oa_version":"None","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","_id":"10903","title":"Accurate invariant checking for programs manipulating lists and arrays with infinite data","status":"public","intvolume":" 7561","abstract":[{"lang":"eng","text":"We propose a logic-based framework for automated reasoning about sequential programs manipulating singly-linked lists and arrays with unbounded data. We introduce the logic SLAD, which allows combining shape constraints, written in a fragment of Separation Logic, with data and size constraints. We address the problem of checking the entailment between SLAD formulas, which is crucial in performing pre-post condition reasoning. Although this problem is undecidable in general for SLAD, we propose a sound and powerful procedure that is able to solve this problem for a large class of formulas, beyond the capabilities of existing techniques and tools. We prove that this procedure is complete, i.e., it is actually a decision procedure for this problem, for an important fragment of SLAD including known decidable logics. We implemented this procedure and shown its preciseness and its efficiency on a significant benchmark of formulas."}],"type":"conference","alternative_title":["LNCS"],"date_published":"2012-10-15T00:00:00Z","publication":"Automated Technology for Verification and Analysis","citation":{"short":"A. Bouajjani, C. Dragoi, C. Enea, M. Sighireanu, in:, Automated Technology for Verification and Analysis, Springer, Berlin, Heidelberg, 2012, pp. 167–182.","mla":"Bouajjani, Ahmed, et al. “Accurate Invariant Checking for Programs Manipulating Lists and Arrays with Infinite Data.” Automated Technology for Verification and Analysis, vol. 7561, Springer, 2012, pp. 167–82, doi:10.1007/978-3-642-33386-6_14.","chicago":"Bouajjani, Ahmed, Cezara Dragoi, Constantin Enea, and Mihaela Sighireanu. “Accurate Invariant Checking for Programs Manipulating Lists and Arrays with Infinite Data.” In Automated Technology for Verification and Analysis, 7561:167–82. LNCS. Berlin, Heidelberg: Springer, 2012. https://doi.org/10.1007/978-3-642-33386-6_14.","ama":"Bouajjani A, Dragoi C, Enea C, Sighireanu M. Accurate invariant checking for programs manipulating lists and arrays with infinite data. In: Automated Technology for Verification and Analysis. Vol 7561. LNCS. Berlin, Heidelberg: Springer; 2012:167-182. doi:10.1007/978-3-642-33386-6_14","ieee":"A. Bouajjani, C. Dragoi, C. Enea, and M. Sighireanu, “Accurate invariant checking for programs manipulating lists and arrays with infinite data,” in Automated Technology for Verification and Analysis, Thiruvananthapuram, India, 2012, vol. 7561, pp. 167–182.","apa":"Bouajjani, A., Dragoi, C., Enea, C., & Sighireanu, M. (2012). Accurate invariant checking for programs manipulating lists and arrays with infinite data. In Automated Technology for Verification and Analysis (Vol. 7561, pp. 167–182). Berlin, Heidelberg: Springer. https://doi.org/10.1007/978-3-642-33386-6_14","ista":"Bouajjani A, Dragoi C, Enea C, Sighireanu M. 2012. Accurate invariant checking for programs manipulating lists and arrays with infinite data. Automated Technology for Verification and Analysis. ATVA: Automated Technology for Verification and AnalysisLNCS, LNCS, vol. 7561, 167–182."},"page":"167-182","day":"15","article_processing_charge":"No","scopus_import":"1","series_title":"LNCS"},{"month":"10","publication_identifier":{"eisbn":["9783642330902"],"issn":["0302-9743"],"eissn":["1611-3349"],"isbn":["9783642330896"]},"conference":{"name":"ESA: European Symposium on Algorithms","end_date":"2012-09-12","start_date":"2012-09-10","location":"Ljubljana, Slovenia"},"doi":"10.1007/978-3-642-33090-2_27","language":[{"iso":"eng"}],"oa":1,"external_id":{"arxiv":["1604.08234"]},"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1604.08234"}],"quality_controlled":"1","project":[{"name":"Game Theory","call_identifier":"FWF","grant_number":"S11407","_id":"25863FF4-B435-11E9-9278-68D0E5697425"},{"_id":"2581B60A-B435-11E9-9278-68D0E5697425","grant_number":"279307","call_identifier":"FP7","name":"Quantitative Graph Games: Theory and Applications"},{"_id":"2587B514-B435-11E9-9278-68D0E5697425","name":"Microsoft Research Faculty Fellowship"}],"ec_funded":1,"author":[{"orcid":"0000-0002-4561-241X","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","last_name":"Chatterjee","first_name":"Krishnendu","full_name":"Chatterjee, Krishnendu"},{"full_name":"Henzinger, Monika H","orcid":"0000-0002-5008-6530","id":"540c9bbd-f2de-11ec-812d-d04a5be85630","last_name":"Henzinger","first_name":"Monika H"},{"full_name":"Krinninger, Sebastian","last_name":"Krinninger","first_name":"Sebastian"},{"first_name":"Danupon","last_name":"Nanongkai","full_name":"Nanongkai, Danupon"}],"related_material":{"record":[{"relation":"later_version","status":"public","id":"535"}]},"date_updated":"2023-09-05T14:09:30Z","date_created":"2022-03-21T08:01:45Z","volume":7501,"acknowledgement":"Supported by the Austrian Science Fund (FWF): P23499-N23, the Austrian Science Fund (FWF): S11407-N23 (RiSE), an ERC Start Grant (279307: Graph Games), and a Microsoft Faculty Fellows Award","year":"2012","publication_status":"published","publisher":"Springer","department":[{"_id":"KrCh"}],"day":"01","article_processing_charge":"No","scopus_import":"1","date_published":"2012-10-01T00:00:00Z","publication":"Algorithms – ESA 2012","citation":{"mla":"Chatterjee, Krishnendu, et al. “Polynomial-Time Algorithms for Energy Games with Special Weight Structures.” Algorithms – ESA 2012, vol. 7501, Springer, 2012, pp. 301–12, doi:10.1007/978-3-642-33090-2_27.","short":"K. Chatterjee, M.H. Henzinger, S. Krinninger, D. Nanongkai, in:, Algorithms – ESA 2012, Springer, 2012, pp. 301–312.","chicago":"Chatterjee, Krishnendu, Monika H Henzinger, Sebastian Krinninger, and Danupon Nanongkai. “Polynomial-Time Algorithms for Energy Games with Special Weight Structures.” In Algorithms – ESA 2012, 7501:301–12. Springer, 2012. https://doi.org/10.1007/978-3-642-33090-2_27.","ama":"Chatterjee K, Henzinger MH, Krinninger S, Nanongkai D. Polynomial-time algorithms for energy games with special weight structures. In: Algorithms – ESA 2012. Vol 7501. Springer; 2012:301-312. doi:10.1007/978-3-642-33090-2_27","ista":"Chatterjee K, Henzinger MH, Krinninger S, Nanongkai D. 2012. Polynomial-time algorithms for energy games with special weight structures. Algorithms – ESA 2012. ESA: European Symposium on Algorithms, LNCS, vol. 7501, 301–312.","apa":"Chatterjee, K., Henzinger, M. H., Krinninger, S., & Nanongkai, D. (2012). Polynomial-time algorithms for energy games with special weight structures. In Algorithms – ESA 2012 (Vol. 7501, pp. 301–312). Ljubljana, Slovenia: Springer. https://doi.org/10.1007/978-3-642-33090-2_27","ieee":"K. Chatterjee, M. H. Henzinger, S. Krinninger, and D. Nanongkai, “Polynomial-time algorithms for energy games with special weight structures,” in Algorithms – ESA 2012, Ljubljana, Slovenia, 2012, vol. 7501, pp. 301–312."},"page":"301-312","abstract":[{"lang":"eng","text":"Energy games belong to a class of turn-based two-player infinite-duration games played on a weighted directed graph. It is one of the rare and intriguing combinatorial problems that lie in NP ∩ co−NP, but are not known to be in P. While the existence of polynomial-time algorithms has been a major open problem for decades, there is no algorithm that solves any non-trivial subclass in polynomial time.\r\nIn this paper, we give several results based on the weight structures of the graph. First, we identify a notion of penalty and present a polynomial-time algorithm when the penalty is large. Our algorithm is the first polynomial-time algorithm on a large class of weighted graphs. It includes several counter examples that show that many previous algorithms, such as value iteration and random facet algorithms, require at least sub-exponential time. Our main technique is developing the first non-trivial approximation algorithm and showing how to convert it to an exact algorithm. Moreover, we show that in a practical case in verification where weights are clustered around a constant number of values, the energy game problem can be solved in polynomial time. We also show that the problem is still as hard as in general when the clique-width is bounded or the graph is strongly ergodic, suggesting that restricting graph structures need not help."}],"type":"conference","alternative_title":["LNCS"],"oa_version":"Preprint","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","_id":"10905","title":"Polynomial-time algorithms for energy games with special weight structures","status":"public","intvolume":" 7501"},{"language":[{"iso":"eng"}],"conference":{"name":"TACAS: Tools and Algorithms for the Construction and Analysis of Systems","start_date":"2012-03-24","location":"Tallinn, Estonia","end_date":"2012-04-01"},"doi":"10.1007/978-3-642-28756-5_46","quality_controlled":"1","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1007/978-3-642-28756-5_46"}],"oa":1,"month":"04","publication_identifier":{"eissn":["1611-3349"],"isbn":["9783642287558"],"issn":["0302-9743"],"eisbn":["9783642287565"]},"date_created":"2022-03-21T08:03:30Z","date_updated":"2023-09-05T14:09:54Z","volume":7214,"author":[{"full_name":"Grebenshchikov, Sergey","first_name":"Sergey","last_name":"Grebenshchikov"},{"id":"335E5684-F248-11E8-B48F-1D18A9856A87","first_name":"Ashutosh","last_name":"Gupta","full_name":"Gupta, Ashutosh"},{"full_name":"Lopes, Nuno P.","last_name":"Lopes","first_name":"Nuno P."},{"last_name":"Popeea","first_name":"Corneliu","full_name":"Popeea, Corneliu"},{"first_name":"Andrey","last_name":"Rybalchenko","full_name":"Rybalchenko, Andrey"}],"publication_status":"published","department":[{"_id":"ToHe"}],"publisher":"Springer","editor":[{"last_name":"Flanagan","first_name":"Cormac","full_name":"Flanagan, Cormac"},{"full_name":"König, Barbara","last_name":"König","first_name":"Barbara"}],"year":"2012","place":"Berlin, Heidelberg","date_published":"2012-04-01T00:00:00Z","page":"549-551","publication":"Tools and Algorithms for the Construction and Analysis of Systems","citation":{"chicago":"Grebenshchikov, Sergey, Ashutosh Gupta, Nuno P. Lopes, Corneliu Popeea, and Andrey Rybalchenko. “HSF(C): A Software Verifier Based on Horn Clauses.” In Tools and Algorithms for the Construction and Analysis of Systems, edited by Cormac Flanagan and Barbara König, 7214:549–51. LNCS. Berlin, Heidelberg: Springer, 2012. https://doi.org/10.1007/978-3-642-28756-5_46.","mla":"Grebenshchikov, Sergey, et al. “HSF(C): A Software Verifier Based on Horn Clauses.” Tools and Algorithms for the Construction and Analysis of Systems, edited by Cormac Flanagan and Barbara König, vol. 7214, Springer, 2012, pp. 549–51, doi:10.1007/978-3-642-28756-5_46.","short":"S. Grebenshchikov, A. Gupta, N.P. Lopes, C. Popeea, A. Rybalchenko, in:, C. Flanagan, B. König (Eds.), Tools and Algorithms for the Construction and Analysis of Systems, Springer, Berlin, Heidelberg, 2012, pp. 549–551.","ista":"Grebenshchikov S, Gupta A, Lopes NP, Popeea C, Rybalchenko A. 2012. HSF(C): A software verifier based on Horn clauses. Tools and Algorithms for the Construction and Analysis of Systems. TACAS: Tools and Algorithms for the Construction and Analysis of SystemsLNCS, LNCS, vol. 7214, 549–551.","apa":"Grebenshchikov, S., Gupta, A., Lopes, N. P., Popeea, C., & Rybalchenko, A. (2012). HSF(C): A software verifier based on Horn clauses. In C. Flanagan & B. König (Eds.), Tools and Algorithms for the Construction and Analysis of Systems (Vol. 7214, pp. 549–551). Berlin, Heidelberg: Springer. https://doi.org/10.1007/978-3-642-28756-5_46","ieee":"S. Grebenshchikov, A. Gupta, N. P. Lopes, C. Popeea, and A. Rybalchenko, “HSF(C): A software verifier based on Horn clauses,” in Tools and Algorithms for the Construction and Analysis of Systems, Tallinn, Estonia, 2012, vol. 7214, pp. 549–551.","ama":"Grebenshchikov S, Gupta A, Lopes NP, Popeea C, Rybalchenko A. HSF(C): A software verifier based on Horn clauses. In: Flanagan C, König B, eds. Tools and Algorithms for the Construction and Analysis of Systems. Vol 7214. LNCS. Berlin, Heidelberg: Springer; 2012:549-551. doi:10.1007/978-3-642-28756-5_46"},"day":"01","article_processing_charge":"No","series_title":"LNCS","scopus_import":"1","oa_version":"Published Version","title":"HSF(C): A software verifier based on Horn clauses","status":"public","intvolume":" 7214","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","_id":"10906","abstract":[{"lang":"eng","text":"HSF(C) is a tool that automates verification of safety and liveness properties for C programs. This paper describes the verification approach taken by HSF(C) and provides instructions on how to install and use the tool."}],"alternative_title":["LNCS"],"type":"conference"},{"page":"107-121","citation":{"chicago":"Gupta, Ashutosh. “Improved Single Pass Algorithms for Resolution Proof Reduction.” In Automated Technology for Verification and Analysis, 7561:107–21. LNCS. Berlin, Heidelberg: Springer Berlin Heidelberg, 2012. https://doi.org/10.1007/978-3-642-33386-6_10.","mla":"Gupta, Ashutosh. “Improved Single Pass Algorithms for Resolution Proof Reduction.” Automated Technology for Verification and Analysis, vol. 7561, Springer Berlin Heidelberg, 2012, pp. 107–21, doi:10.1007/978-3-642-33386-6_10.","short":"A. Gupta, in:, Automated Technology for Verification and Analysis, Springer Berlin Heidelberg, Berlin, Heidelberg, 2012, pp. 107–121.","ista":"Gupta A. 2012.Improved Single Pass Algorithms for Resolution Proof Reduction. In: Automated Technology for Verification and Analysis. vol. 7561, 107–121.","ieee":"A. Gupta, “Improved Single Pass Algorithms for Resolution Proof Reduction,” in Automated Technology for Verification and Analysis, vol. 7561, Berlin, Heidelberg: Springer Berlin Heidelberg, 2012, pp. 107–121.","apa":"Gupta, A. (2012). Improved Single Pass Algorithms for Resolution Proof Reduction. In Automated Technology for Verification and Analysis (Vol. 7561, pp. 107–121). Berlin, Heidelberg: Springer Berlin Heidelberg. https://doi.org/10.1007/978-3-642-33386-6_10","ama":"Gupta A. Improved Single Pass Algorithms for Resolution Proof Reduction. In: Automated Technology for Verification and Analysis. Vol 7561. LNCS. Berlin, Heidelberg: Springer Berlin Heidelberg; 2012:107-121. doi:10.1007/978-3-642-33386-6_10"},"publication":"Automated Technology for Verification and Analysis","date_published":"2012-01-01T00:00:00Z","series_title":"LNCS","has_accepted_license":"1","article_processing_charge":"No","intvolume":" 7561","title":"Improved Single Pass Algorithms for Resolution Proof Reduction","ddc":["005"],"status":"public","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","_id":"5745","file":[{"file_size":465502,"content_type":"application/pdf","creator":"dernst","access_level":"open_access","file_name":"2012_ATVA_Gupta.pdf","checksum":"68415837a315de3cc4d120f6019d752c","date_updated":"2020-07-14T12:47:10Z","date_created":"2018-12-18T13:07:35Z","relation":"main_file","file_id":"5746"}],"oa_version":"None","pubrep_id":"180","type":"book_chapter","project":[{"call_identifier":"FP7","name":"Quantitative Reactive Modeling","_id":"25EE3708-B435-11E9-9278-68D0E5697425","grant_number":"267989"}],"quality_controlled":"1","oa":1,"language":[{"iso":"eng"}],"doi":"10.1007/978-3-642-33386-6_10","conference":{"name":"ATVA 2012","location":"Thiruvananthapuram, Kerala, India","start_date":"2012-10-03","end_date":"2012-10-06"},"publication_identifier":{"isbn":["9783642333859","9783642333866"],"eissn":["1611-3349"],"issn":["0302-9743"]},"publisher":"Springer Berlin Heidelberg","department":[{"_id":"ToHe"}],"publication_status":"published","year":"2012","volume":7561,"date_created":"2018-12-18T13:01:46Z","date_updated":"2023-09-05T14:15:29Z","author":[{"first_name":"Ashutosh","last_name":"Gupta","full_name":"Gupta, Ashutosh"}],"place":"Berlin, Heidelberg","ec_funded":1,"file_date_updated":"2020-07-14T12:47:10Z"},{"day":"01","has_accepted_license":"1","date_published":"2012-01-01T00:00:00Z","page":"445 - 460","citation":{"ista":"Zufferey D, Wies T, Henzinger TA. 2012. Ideal abstractions for well structured transition systems. VMCAI: Verification, Model Checking and Abstract Interpretation, LNCS, vol. 7148, 445–460.","apa":"Zufferey, D., Wies, T., & Henzinger, T. A. (2012). Ideal abstractions for well structured transition systems (Vol. 7148, pp. 445–460). Presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Philadelphia, PA, USA: Springer. https://doi.org/10.1007/978-3-642-27940-9_29","ieee":"D. Zufferey, T. Wies, and T. A. Henzinger, “Ideal abstractions for well structured transition systems,” presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Philadelphia, PA, USA, 2012, vol. 7148, pp. 445–460.","ama":"Zufferey D, Wies T, Henzinger TA. Ideal abstractions for well structured transition systems. In: Vol 7148. Springer; 2012:445-460. doi:10.1007/978-3-642-27940-9_29","chicago":"Zufferey, Damien, Thomas Wies, and Thomas A Henzinger. “Ideal Abstractions for Well Structured Transition Systems,” 7148:445–60. Springer, 2012. https://doi.org/10.1007/978-3-642-27940-9_29.","mla":"Zufferey, Damien, et al. Ideal Abstractions for Well Structured Transition Systems. Vol. 7148, Springer, 2012, pp. 445–60, doi:10.1007/978-3-642-27940-9_29.","short":"D. Zufferey, T. Wies, T.A. Henzinger, in:, Springer, 2012, pp. 445–460."},"abstract":[{"lang":"eng","text":"Many infinite state systems can be seen as well-structured transition systems (WSTS), i.e., systems equipped with a well-quasi-ordering on states that is also a simulation relation. WSTS are an attractive target for formal analysis because there exist generic algorithms that decide interesting verification problems for this class. Among the most popular algorithms are acceleration-based forward analyses for computing the covering set. Termination of these algorithms can only be guaranteed for flattable WSTS. Yet, many WSTS of practical interest are not flattable and the question whether any given WSTS is flattable is itself undecidable. We therefore propose an analysis that computes the covering set and captures the essence of acceleration-based algorithms, but sacrifices precision for guaranteed termination. Our analysis is an abstract interpretation whose abstract domain builds on the ideal completion of the well-quasi-ordered state space, and a widening operator that mimics acceleration and controls the loss of precision of the analysis. We present instances of our framework for various classes of WSTS. Our experience with a prototype implementation indicates that, despite the inherent precision loss, our analysis often computes the precise covering set of the analyzed system."}],"alternative_title":["LNCS"],"type":"conference","file":[{"date_created":"2018-12-12T10:09:35Z","date_updated":"2020-07-14T12:46:05Z","checksum":"f2f0d55efa32309ad1fe65a5fcaad90c","file_id":"4759","relation":"main_file","creator":"system","file_size":217104,"content_type":"application/pdf","file_name":"IST-2012-100-v1+1_Ideal_abstractions_for_well-structured_transition_systems.pdf","access_level":"open_access"}],"oa_version":"Submitted Version","pubrep_id":"100","ddc":["000","005"],"status":"public","title":"Ideal abstractions for well structured transition systems","intvolume":" 7148","_id":"3251","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","month":"01","language":[{"iso":"eng"}],"conference":{"name":"VMCAI: Verification, Model Checking and Abstract Interpretation","location":"Philadelphia, PA, USA","start_date":"2012-01-22","end_date":"2012-01-24"},"doi":"10.1007/978-3-642-27940-9_29","quality_controlled":"1","project":[{"_id":"25EE3708-B435-11E9-9278-68D0E5697425","grant_number":"267989","call_identifier":"FP7","name":"Quantitative Reactive Modeling"},{"name":"Rigorous Systems Engineering","call_identifier":"FWF","_id":"25832EC2-B435-11E9-9278-68D0E5697425","grant_number":"S 11407_N23"}],"oa":1,"file_date_updated":"2020-07-14T12:46:05Z","publist_id":"3406","ec_funded":1,"date_updated":"2023-09-07T11:36:36Z","date_created":"2018-12-11T12:02:16Z","volume":7148,"author":[{"orcid":"0000-0002-3197-8736","id":"4397AC76-F248-11E8-B48F-1D18A9856A87","last_name":"Zufferey","first_name":"Damien","full_name":"Zufferey, Damien"},{"full_name":"Wies, Thomas","first_name":"Thomas","last_name":"Wies","id":"447BFB88-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Henzinger","first_name":"Thomas A","orcid":"0000−0002−2985−7724","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","full_name":"Henzinger, Thomas A"}],"related_material":{"record":[{"status":"public","relation":"dissertation_contains","id":"1405"}]},"publication_status":"published","publisher":"Springer","department":[{"_id":"ToHe"}],"acknowledgement":"This research was supported in part by the European Research Council (ERC) Advanced Investigator Grant QUAREM and by the Austrian Science Fund (FWF) project S11402-N23.","year":"2012"},{"date_published":"2012-06-28T00:00:00Z","publication":"Nature","citation":{"mla":"Diaz Jr, Luis, et al. “The Molecular Evolution of Acquired Resistance to Targeted EGFR Blockade in Colorectal Cancers.” Nature, vol. 486, no. 7404, Nature Publishing Group, 2012, pp. 537–40, doi:10.1038/nature11219.","short":"L. Diaz Jr, R. Williams, J. Wu, I. Kinde, J. Hecht, J. Berlin, B. Allen, I. Božić, J. Reiter, M. Nowak, K. Kinzler, K. Oliner, B. Vogelstein, Nature 486 (2012) 537–540.","chicago":"Diaz Jr, Luis, Richard Williams, Jian Wu, Isaac Kinde, Joel Hecht, Jordan Berlin, Benjamin Allen, et al. “The Molecular Evolution of Acquired Resistance to Targeted EGFR Blockade in Colorectal Cancers.” Nature. Nature Publishing Group, 2012. https://doi.org/10.1038/nature11219.","ama":"Diaz Jr L, Williams R, Wu J, et al. The molecular evolution of acquired resistance to targeted EGFR blockade in colorectal cancers. Nature. 2012;486(7404):537-540. doi:10.1038/nature11219","ista":"Diaz Jr L, Williams R, Wu J, Kinde I, Hecht J, Berlin J, Allen B, Božić I, Reiter J, Nowak M, Kinzler K, Oliner K, Vogelstein B. 2012. The molecular evolution of acquired resistance to targeted EGFR blockade in colorectal cancers. Nature. 486(7404), 537–540.","apa":"Diaz Jr, L., Williams, R., Wu, J., Kinde, I., Hecht, J., Berlin, J., … Vogelstein, B. (2012). The molecular evolution of acquired resistance to targeted EGFR blockade in colorectal cancers. Nature. Nature Publishing Group. https://doi.org/10.1038/nature11219","ieee":"L. Diaz Jr et al., “The molecular evolution of acquired resistance to targeted EGFR blockade in colorectal cancers,” Nature, vol. 486, no. 7404. Nature Publishing Group, pp. 537–540, 2012."},"page":"537 - 540","day":"28","scopus_import":1,"oa_version":"Submitted Version","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","_id":"3157","status":"public","title":"The molecular evolution of acquired resistance to targeted EGFR blockade in colorectal cancers","intvolume":" 486","abstract":[{"lang":"eng","text":"Colorectal tumours that are wild type for KRAS are often sensitive to EGFR blockade, but almost always develop resistance within several months of initiating therapy. The mechanisms underlying this acquired resistance to anti-EGFR antibodies are largely unknown. This situation is in marked contrast to that of small-molecule targeted agents, such as inhibitors of ABL, EGFR, BRAF and MEK, in which mutations in the genes encoding the protein targets render the tumours resistant to the effects of the drugs. The simplest hypothesis to account for the development of resistance to EGFR blockade is that rare cells with KRAS mutations pre-exist at low levels in tumours with ostensibly wild-type KRAS genes. Although this hypothesis would seem readily testable, there is no evidence in pre-clinical models to support it, nor is there data from patients. To test this hypothesis, we determined whether mutant KRAS DNA could be detected in the circulation of 28 patients receiving monotherapy with panitumumab, a therapeutic anti-EGFR antibody. We found that 9 out of 24 (38%) patients whose tumours were initially KRAS wild type developed detectable mutations in KRAS in their sera, three of which developed multiple different KRAS mutations. The appearance of these mutations was very consistent, generally occurring between 5 and 6months following treatment. Mathematical modelling indicated that the mutations were present in expanded subclones before the initiation of panitumumab treatment. These results suggest that the emergence of KRAS mutations is a mediator of acquired resistance to EGFR blockade and that these mutations can be detected in a non-invasive manner. They explain why solid tumours develop resistance to targeted therapies in a highly reproducible fashion."}],"issue":"7404","type":"journal_article","doi":"10.1038/nature11219","language":[{"iso":"eng"}],"main_file_link":[{"open_access":"1","url":"http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3436069/"}],"external_id":{"pmid":["22722843"]},"oa":1,"quality_controlled":"1","project":[{"name":"Quantitative Graph Games: Theory and Applications","call_identifier":"FP7","grant_number":"279307","_id":"2581B60A-B435-11E9-9278-68D0E5697425"},{"name":"Rigorous Systems Engineering","call_identifier":"FWF","_id":"25832EC2-B435-11E9-9278-68D0E5697425","grant_number":"S 11407_N23"}],"month":"06","author":[{"full_name":"Diaz Jr, Luis","last_name":"Diaz Jr","first_name":"Luis"},{"full_name":"Williams, Richard","first_name":"Richard","last_name":"Williams"},{"first_name":"Jian","last_name":"Wu","full_name":"Wu, Jian"},{"first_name":"Isaac","last_name":"Kinde","full_name":"Kinde, Isaac"},{"full_name":"Hecht, Joel","last_name":"Hecht","first_name":"Joel"},{"first_name":"Jordan","last_name":"Berlin","full_name":"Berlin, Jordan"},{"last_name":"Allen","first_name":"Benjamin","full_name":"Allen, Benjamin"},{"first_name":"Ivana","last_name":"Božić","full_name":"Božić, Ivana"},{"full_name":"Reiter, Johannes","first_name":"Johannes","last_name":"Reiter","id":"4A918E98-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-0170-7353"},{"first_name":"Martin","last_name":"Nowak","full_name":"Nowak, Martin"},{"full_name":"Kinzler, Kenneth","first_name":"Kenneth","last_name":"Kinzler"},{"full_name":"Oliner, Kelly","last_name":"Oliner","first_name":"Kelly"},{"last_name":"Vogelstein","first_name":"Bert","full_name":"Vogelstein, Bert"}],"related_material":{"record":[{"id":"1400","status":"public","relation":"dissertation_contains"}]},"date_created":"2018-12-11T12:01:43Z","date_updated":"2023-09-07T11:40:43Z","volume":486,"year":"2012","pmid":1,"publication_status":"published","department":[{"_id":"KrCh"}],"publisher":"Nature Publishing Group","publist_id":"3537","ec_funded":1},{"oa_version":"Submitted Version","intvolume":" 81","title":"Evolutionary dynamics of biological auctions","status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"3260","issue":"1","abstract":[{"lang":"eng","text":"Many scenarios in the living world, where individual organisms compete for winning positions (or resources), have properties of auctions. Here we study the evolution of bids in biological auctions. For each auction, n individuals are drawn at random from a population of size N. Each individual makes a bid which entails a cost. The winner obtains a benefit of a certain value. Costs and benefits are translated into reproductive success (fitness). Therefore, successful bidding strategies spread in the population. We compare two types of auctions. In “biological all-pay auctions”, the costs are the bid for every participating individual. In “biological second price all-pay auctions”, the cost for everyone other than the winner is the bid, but the cost for the winner is the second highest bid. Second price all-pay auctions are generalizations of the “war of attrition” introduced by Maynard Smith. We study evolutionary dynamics in both types of auctions. We calculate pairwise invasion plots and evolutionarily stable distributions over the continuous strategy space. We find that the average bid in second price all-pay auctions is higher than in all-pay auctions, but the average cost for the winner is similar in both auctions. In both cases, the average bid is a declining function of the number of participants, n. The more individuals participate in an auction the smaller is the chance of winning, and thus expensive bids must be avoided.\r\n"}],"type":"journal_article","date_published":"2012-02-01T00:00:00Z","page":"69 - 80","citation":{"ista":"Chatterjee K, Reiter J, Nowak M. 2012. Evolutionary dynamics of biological auctions. Theoretical Population Biology. 81(1), 69–80.","apa":"Chatterjee, K., Reiter, J., & Nowak, M. (2012). Evolutionary dynamics of biological auctions. Theoretical Population Biology. Academic Press. https://doi.org/10.1016/j.tpb.2011.11.003","ieee":"K. Chatterjee, J. Reiter, and M. Nowak, “Evolutionary dynamics of biological auctions,” Theoretical Population Biology, vol. 81, no. 1. Academic Press, pp. 69–80, 2012.","ama":"Chatterjee K, Reiter J, Nowak M. Evolutionary dynamics of biological auctions. Theoretical Population Biology. 2012;81(1):69-80. doi:10.1016/j.tpb.2011.11.003","chicago":"Chatterjee, Krishnendu, Johannes Reiter, and Martin Nowak. “Evolutionary Dynamics of Biological Auctions.” Theoretical Population Biology. Academic Press, 2012. https://doi.org/10.1016/j.tpb.2011.11.003.","mla":"Chatterjee, Krishnendu, et al. “Evolutionary Dynamics of Biological Auctions.” Theoretical Population Biology, vol. 81, no. 1, Academic Press, 2012, pp. 69–80, doi:10.1016/j.tpb.2011.11.003.","short":"K. Chatterjee, J. Reiter, M. Nowak, Theoretical Population Biology 81 (2012) 69–80."},"publication":"Theoretical Population Biology","day":"01","scopus_import":1,"volume":81,"date_updated":"2023-09-07T11:40:43Z","date_created":"2018-12-11T12:02:19Z","related_material":{"record":[{"relation":"dissertation_contains","status":"public","id":"1400"}]},"author":[{"full_name":"Chatterjee, Krishnendu","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-4561-241X","first_name":"Krishnendu","last_name":"Chatterjee"},{"orcid":"0000-0002-0170-7353","id":"4A918E98-F248-11E8-B48F-1D18A9856A87","last_name":"Reiter","first_name":"Johannes","full_name":"Reiter, Johannes"},{"full_name":"Nowak, Martin","first_name":"Martin","last_name":"Nowak"}],"department":[{"_id":"KrCh"}],"publisher":"Academic Press","publication_status":"published","pmid":1,"year":"2012","ec_funded":1,"publist_id":"3388","language":[{"iso":"eng"}],"doi":"10.1016/j.tpb.2011.11.003","project":[{"_id":"2581B60A-B435-11E9-9278-68D0E5697425","grant_number":"279307","call_identifier":"FP7","name":"Quantitative Graph Games: Theory and Applications"},{"_id":"25832EC2-B435-11E9-9278-68D0E5697425","grant_number":"S 11407_N23","name":"Rigorous Systems Engineering","call_identifier":"FWF"},{"_id":"2584A770-B435-11E9-9278-68D0E5697425","grant_number":"P 23499-N23","call_identifier":"FWF","name":"Modern Graph Algorithmic Techniques in Formal Verification"},{"_id":"2587B514-B435-11E9-9278-68D0E5697425","name":"Microsoft Research Faculty Fellowship"}],"quality_controlled":"1","oa":1,"main_file_link":[{"open_access":"1","url":"http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3279759/ "}],"external_id":{"pmid":["22120126"]},"month":"02"},{"oa_version":"Published Version","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","_id":"3258","title":"Active dendrites support efficient initiation of dendritic spikes in hippocampal CA3 pyramidal neurons","status":"public","intvolume":" 15","abstract":[{"text":"CA3 pyramidal neurons are important for memory formation and pattern completion in the hippocampal network. It is generally thought that proximal synapses from the mossy fibers activate these neurons most efficiently, whereas distal inputs from the perforant path have a weaker modulatory influence. We used confocally targeted patch-clamp recording from dendrites and axons to map the activation of rat CA3 pyramidal neurons at the subcellular level. Our results reveal two distinct dendritic domains. In the proximal domain, action potentials initiated in the axon backpropagate actively with large amplitude and fast time course. In the distal domain, Na+ channel–mediated dendritic spikes are efficiently initiated by waveforms mimicking synaptic events. CA3 pyramidal neuron dendrites showed a high Na+-to-K+ conductance density ratio, providing ideal conditions for active backpropagation and dendritic spike initiation. Dendritic spikes may enhance the computational power of CA3 pyramidal neurons in the hippocampal network.","lang":"eng"}],"issue":"4","type":"journal_article","date_published":"2012-04-01T00:00:00Z","publication":"Nature Neuroscience","citation":{"chicago":"Kim, Sooyun, José Guzmán, Hua Hu, and Peter M Jonas. “Active Dendrites Support Efficient Initiation of Dendritic Spikes in Hippocampal CA3 Pyramidal Neurons.” Nature Neuroscience. Nature Publishing Group, 2012. https://doi.org/10.1038/nn.3060.","short":"S. Kim, J. Guzmán, H. Hu, P.M. Jonas, Nature Neuroscience 15 (2012) 600–606.","mla":"Kim, Sooyun, et al. “Active Dendrites Support Efficient Initiation of Dendritic Spikes in Hippocampal CA3 Pyramidal Neurons.” Nature Neuroscience, vol. 15, no. 4, Nature Publishing Group, 2012, pp. 600–06, doi:10.1038/nn.3060.","apa":"Kim, S., Guzmán, J., Hu, H., & Jonas, P. M. (2012). Active dendrites support efficient initiation of dendritic spikes in hippocampal CA3 pyramidal neurons. Nature Neuroscience. Nature Publishing Group. https://doi.org/10.1038/nn.3060","ieee":"S. Kim, J. Guzmán, H. Hu, and P. M. Jonas, “Active dendrites support efficient initiation of dendritic spikes in hippocampal CA3 pyramidal neurons,” Nature Neuroscience, vol. 15, no. 4. Nature Publishing Group, pp. 600–606, 2012.","ista":"Kim S, Guzmán J, Hu H, Jonas PM. 2012. Active dendrites support efficient initiation of dendritic spikes in hippocampal CA3 pyramidal neurons. Nature Neuroscience. 15(4), 600–606.","ama":"Kim S, Guzmán J, Hu H, Jonas PM. Active dendrites support efficient initiation of dendritic spikes in hippocampal CA3 pyramidal neurons. Nature Neuroscience. 2012;15(4):600-606. doi:10.1038/nn.3060"},"article_type":"original","page":"600 - 606","day":"01","article_processing_charge":"No","scopus_import":"1","author":[{"full_name":"Kim, Sooyun","first_name":"Sooyun","last_name":"Kim","id":"394AB1C8-F248-11E8-B48F-1D18A9856A87"},{"id":"30CC5506-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-2209-5242","first_name":"José","last_name":"Guzmán","full_name":"Guzmán, José"},{"full_name":"Hu, Hua","id":"4AC0145C-F248-11E8-B48F-1D18A9856A87","last_name":"Hu","first_name":"Hua"},{"full_name":"Jonas, Peter M","orcid":"0000-0001-5001-4804","id":"353C1B58-F248-11E8-B48F-1D18A9856A87","last_name":"Jonas","first_name":"Peter M"}],"related_material":{"record":[{"id":"2964","status":"public","relation":"dissertation_contains"}]},"date_updated":"2023-09-07T11:43:52Z","date_created":"2018-12-11T12:02:18Z","volume":15,"acknowledgement":"This work was supported by the Deutsche Forschungsgemeinschaft (TR 3/B10) and the European Union (European Research Council Advanced grant to P.J.).","year":"2012","pmid":1,"publication_status":"published","publisher":"Nature Publishing Group","department":[{"_id":"PeJo"}],"publist_id":"3390","doi":"10.1038/nn.3060","language":[{"iso":"eng"}],"main_file_link":[{"url":"http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3617474/","open_access":"1"}],"oa":1,"external_id":{"pmid":["22388958"]},"quality_controlled":"1","project":[{"name":"Glutamaterge synaptische Übertragung und Plastizität in hippocampalen Mikroschaltkreisen","_id":"25BDE9A4-B435-11E9-9278-68D0E5697425","grant_number":"SFB-TR3-TP10B"}],"month":"04","publication_identifier":{"issn":["1546-1726"]}},{"month":"06","day":"01","article_processing_charge":"No","publication_identifier":{"issn":["2663-337X"]},"date_published":"2012-06-01T00:00:00Z","degree_awarded":"PhD","supervisor":[{"id":"353C1B58-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5001-4804","first_name":"Peter M","last_name":"Jonas","full_name":"Jonas, Peter M"}],"language":[{"iso":"eng"}],"citation":{"mla":"Kim, Sooyun. Active Properties of Hippocampal CA3 Pyramidal Neuron Dendrites. Institute of Science and Technology Austria, 2012.","short":"S. Kim, Active Properties of Hippocampal CA3 Pyramidal Neuron Dendrites, Institute of Science and Technology Austria, 2012.","chicago":"Kim, Sooyun. “Active Properties of Hippocampal CA3 Pyramidal Neuron Dendrites.” Institute of Science and Technology Austria, 2012.","ama":"Kim S. Active properties of hippocampal CA3 pyramidal neuron dendrites. 2012.","ista":"Kim S. 2012. Active properties of hippocampal CA3 pyramidal neuron dendrites. Institute of Science and Technology Austria.","apa":"Kim, S. (2012). Active properties of hippocampal CA3 pyramidal neuron dendrites. Institute of Science and Technology Austria.","ieee":"S. Kim, “Active properties of hippocampal CA3 pyramidal neuron dendrites,” Institute of Science and Technology Austria, 2012."},"page":"65","abstract":[{"lang":"eng","text":"CA3 pyramidal neurons are important for memory formation and pattern completion in the hippocampal network. These neurons receive multiple excitatory inputs from numerous sources. Therefore, the rules of spatiotemporal integration of multiple synaptic inputs and propagation of action potentials are important to understand how CA3 neurons contribute to higher brain functions at cellular level. By using confocally targeted patch-clamp recording techniques, we investigated the biophysical properties of rat CA3 pyramidal neuron dendrites. We found two distinct dendritic domains critical for action potential initiation and propagation: In the proximal domain, action potentials initiated in the axon backpropagate actively with large amplitude and fast time course. In the distal domain, Na+-channel mediated dendritic spikes are efficiently evoked by local dendritic depolarization or waveforms mimicking synaptic events. These findings can be explained by a high Na+-to-K+ conductance density ratio of CA3 pyramidal neuron dendrites. The results challenge the prevailing view that proximal mossy fiber inputs activate CA3 pyramidal neurons more efficiently than distal perforant inputs by showing that the distal synapses trigger a different form of activity represented by dendritic spikes. The high probability of dendritic spike initiation in the distal area may enhance the computational power of CA3 pyramidal neurons in the hippocampal network. "}],"publist_id":"3755","type":"dissertation","alternative_title":["ISTA Thesis"],"author":[{"full_name":"Kim, Sooyun","id":"394AB1C8-F248-11E8-B48F-1D18A9856A87","last_name":"Kim","first_name":"Sooyun"}],"related_material":{"record":[{"relation":"part_of_dissertation","status":"public","id":"3258"}]},"date_updated":"2023-09-07T11:43:51Z","date_created":"2018-12-11T12:00:35Z","oa_version":"None","_id":"2964","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","year":"2012","title":"Active properties of hippocampal CA3 pyramidal neuron dendrites","publication_status":"published","status":"public","department":[{"_id":"PeJo"},{"_id":"GradSch"}],"publisher":"Institute of Science and Technology Austria"},{"volume":24,"oa_version":"None","date_created":"2018-12-11T12:02:14Z","date_updated":"2023-09-07T12:05:08Z","related_material":{"record":[{"relation":"dissertation_contains","status":"public","id":"961"}]},"author":[{"id":"419EECCC-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-2676-3367","first_name":"Vanessa","last_name":"Barone","full_name":"Barone, Vanessa"},{"last_name":"Heisenberg","first_name":"Carl-Philipp J","orcid":"0000-0002-0912-4566","id":"39427864-F248-11E8-B48F-1D18A9856A87","full_name":"Heisenberg, Carl-Philipp J"}],"department":[{"_id":"CaHe"}],"intvolume":" 24","publisher":"Elsevier","title":"Cell adhesion in embryo morphogenesis","publication_status":"published","status":"public","_id":"3246","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","year":"2012","acknowledgement":"This review comes from a themed issue on Cell structure and dynamics Edited by Jason Swedlow and Gaudenz Danuser","issue":"1","publist_id":"3423","abstract":[{"text":"Visualizing and analyzing shape changes at various scales, ranging from single molecules to whole organisms, are essential for understanding complex morphogenetic processes, such as early embryonic development. Embryo morphogenesis relies on the interplay between different tissues, the properties of which are again determined by the interaction between their constituent cells. Cell interactions, on the other hand, are controlled by various molecules, such as signaling and adhesion molecules, which in order to exert their functions need to be spatiotemporally organized within and between the interacting cells. In this review, we will focus on the role of cell adhesion functioning at different scales to organize cell, tissue and embryo morphogenesis. We will specifically ask how the subcellular distribution of adhesion molecules controls the formation of cell-cell contacts, how cell-cell contacts determine tissue shape, and how tissue interactions regulate embryo morphogenesis.","lang":"eng"}],"type":"journal_article","language":[{"iso":"eng"}],"doi":"10.1016/j.ceb.2011.11.006","date_published":"2012-02-01T00:00:00Z","page":"148 - 153","quality_controlled":"1","citation":{"ama":"Barone V, Heisenberg C-PJ. Cell adhesion in embryo morphogenesis. Current Opinion in Cell Biology. 2012;24(1):148-153. doi:10.1016/j.ceb.2011.11.006","ieee":"V. Barone and C.-P. J. Heisenberg, “Cell adhesion in embryo morphogenesis,” Current Opinion in Cell Biology, vol. 24, no. 1. Elsevier, pp. 148–153, 2012.","apa":"Barone, V., & Heisenberg, C.-P. J. (2012). Cell adhesion in embryo morphogenesis. Current Opinion in Cell Biology. Elsevier. https://doi.org/10.1016/j.ceb.2011.11.006","ista":"Barone V, Heisenberg C-PJ. 2012. Cell adhesion in embryo morphogenesis. Current Opinion in Cell Biology. 24(1), 148–153.","short":"V. Barone, C.-P.J. Heisenberg, Current Opinion in Cell Biology 24 (2012) 148–153.","mla":"Barone, Vanessa, and Carl-Philipp J. Heisenberg. “Cell Adhesion in Embryo Morphogenesis.” Current Opinion in Cell Biology, vol. 24, no. 1, Elsevier, 2012, pp. 148–53, doi:10.1016/j.ceb.2011.11.006.","chicago":"Barone, Vanessa, and Carl-Philipp J Heisenberg. “Cell Adhesion in Embryo Morphogenesis.” Current Opinion in Cell Biology. Elsevier, 2012. https://doi.org/10.1016/j.ceb.2011.11.006."},"publication":"Current Opinion in Cell Biology","day":"01","month":"02","scopus_import":1},{"article_type":"original","page":"1360-1364","publication":"Science","citation":{"chicago":"Ibarra, Christian A., Xiaoqi Feng, Vera K. Schoft, Tzung-Fu Hsieh, Rie Uzawa, Jessica A. Rodrigues, Assaf Zemach, et al. “Active DNA Demethylation in Plant Companion Cells Reinforces Transposon Methylation in Gametes.” Science. American Association for the Advancement of Science, 2012. https://doi.org/10.1126/science.1224839.","mla":"Ibarra, Christian A., et al. “Active DNA Demethylation in Plant Companion Cells Reinforces Transposon Methylation in Gametes.” Science, vol. 337, no. 6100, American Association for the Advancement of Science, 2012, pp. 1360–64, doi:10.1126/science.1224839.","short":"C.A. Ibarra, X. Feng, V.K. Schoft, T.-F. Hsieh, R. Uzawa, J.A. Rodrigues, A. Zemach, N. Chumak, A. Machlicova, T. Nishimura, D. Rojas, R.L. Fischer, H. Tamaru, D. Zilberman, Science 337 (2012) 1360–1364.","ista":"Ibarra CA, Feng X, Schoft VK, Hsieh T-F, Uzawa R, Rodrigues JA, Zemach A, Chumak N, Machlicova A, Nishimura T, Rojas D, Fischer RL, Tamaru H, Zilberman D. 2012. Active DNA demethylation in plant companion cells reinforces transposon methylation in gametes. Science. 337(6100), 1360–1364.","apa":"Ibarra, C. A., Feng, X., Schoft, V. K., Hsieh, T.-F., Uzawa, R., Rodrigues, J. A., … Zilberman, D. (2012). Active DNA demethylation in plant companion cells reinforces transposon methylation in gametes. Science. American Association for the Advancement of Science. https://doi.org/10.1126/science.1224839","ieee":"C. A. Ibarra et al., “Active DNA demethylation in plant companion cells reinforces transposon methylation in gametes,” Science, vol. 337, no. 6100. American Association for the Advancement of Science, pp. 1360–1364, 2012.","ama":"Ibarra CA, Feng X, Schoft VK, et al. Active DNA demethylation in plant companion cells reinforces transposon methylation in gametes. Science. 2012;337(6100):1360-1364. doi:10.1126/science.1224839"},"date_published":"2012-09-14T00:00:00Z","keyword":["Multidisciplinary"],"scopus_import":"1","day":"14","article_processing_charge":"No","title":"Active DNA demethylation in plant companion cells reinforces transposon methylation in gametes","status":"public","intvolume":" 337","_id":"12198","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","type":"journal_article","abstract":[{"lang":"eng","text":"The Arabidopsis thaliana central cell, the companion cell of the egg, undergoes DNA demethylation before fertilization, but the targeting preferences, mechanism, and biological significance of this process remain unclear. Here, we show that active DNA demethylation mediated by the DEMETER DNA glycosylase accounts for all of the demethylation in the central cell and preferentially targets small, AT-rich, and nucleosome-depleted euchromatic transposable elements. The vegetative cell, the companion cell of sperm, also undergoes DEMETER-dependent demethylation of similar sequences, and lack of DEMETER in vegetative cells causes reduced small RNA–directed DNA methylation of transposons in sperm. Our results demonstrate that demethylation in companion cells reinforces transposon methylation in plant gametes and likely contributes to stable silencing of transposable elements across generations."}],"issue":"6100","quality_controlled":"1","oa":1,"main_file_link":[{"open_access":"1","url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4034762/"}],"external_id":{"pmid":["22984074"]},"language":[{"iso":"eng"}],"doi":"10.1126/science.1224839","month":"09","publication_identifier":{"eissn":["1095-9203"],"issn":["0036-8075"]},"publication_status":"published","publisher":"American Association for the Advancement of Science","department":[{"_id":"XiFe"}],"acknowledgement":"We thank S. Harmer for assistance with the analysis of histone modifications, the BioOptics team at the Vienna Biocenter Campus for sorting sperm and vegetative cell nuclei, K. Slotkin for the LAT52p-amiRNA=GFP plasmid, and G. Drews for the DD45p-GFP transgenic line. This work was partially funded by an NIH grant (GM69415) to R.L.F., NSF grants (MCB-0918821 and IOS-1025890) to R.L.F. and D.Z., a Young Investigator Grant from the Arnold and Mabel Beckman Foundation to D.Z., an Austrian Science Fund (FWF) grant P21389-B03 to H.T., a Ruth L. Kirschstein NIH Predoctoral Fellowship (GM093633) to C.A.I., a Fulbright Scholarship to J.A.R., a fellowship from the Jane Coffin Childs Memorial Fund to A.Z., and a Robert and Colleen Haas Scholarship to D.R. Sequencing data are deposited in GEO (GSE38935).","year":"2012","pmid":1,"date_updated":"2023-10-16T09:27:26Z","date_created":"2023-01-16T09:21:24Z","volume":337,"author":[{"full_name":"Ibarra, Christian A.","last_name":"Ibarra","first_name":"Christian A."},{"full_name":"Feng, Xiaoqi","last_name":"Feng","first_name":"Xiaoqi","orcid":"0000-0002-4008-1234","id":"e0164712-22ee-11ed-b12a-d80fcdf35958"},{"full_name":"Schoft, Vera K.","last_name":"Schoft","first_name":"Vera K."},{"first_name":"Tzung-Fu","last_name":"Hsieh","full_name":"Hsieh, Tzung-Fu"},{"full_name":"Uzawa, Rie","last_name":"Uzawa","first_name":"Rie"},{"last_name":"Rodrigues","first_name":"Jessica A.","full_name":"Rodrigues, Jessica A."},{"full_name":"Zemach, Assaf","first_name":"Assaf","last_name":"Zemach"},{"full_name":"Chumak, Nina","last_name":"Chumak","first_name":"Nina"},{"full_name":"Machlicova, Adriana","first_name":"Adriana","last_name":"Machlicova"},{"last_name":"Nishimura","first_name":"Toshiro","full_name":"Nishimura, Toshiro"},{"full_name":"Rojas, Denisse","last_name":"Rojas","first_name":"Denisse"},{"last_name":"Fischer","first_name":"Robert L.","full_name":"Fischer, Robert L."},{"full_name":"Tamaru, Hisashi","first_name":"Hisashi","last_name":"Tamaru"},{"full_name":"Zilberman, Daniel","first_name":"Daniel","last_name":"Zilberman"}]},{"issue":"1","abstract":[{"text":"First we note that the best polynomial approximation to vertical bar x vertical bar on the set, which consists of an interval on the positive half-axis and a point on the negative half-axis, can be given by means of the classical Chebyshev polynomials. Then we explore the cases when a solution of the related problem on two intervals can be given in elementary functions.","lang":"eng"}],"type":"journal_article","oa_version":"Published Version","intvolume":" 8","title":"Elementary solutions of the Bernstein problem on two intervals","status":"public","_id":"6588","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","day":"01","scopus_import":"1","date_published":"2012-01-01T00:00:00Z","page":"63-78","article_type":"original","citation":{"short":"F. Pausinger, Journal of Mathematical Physics, Analysis, Geometry 8 (2012) 63–78.","mla":"Pausinger, Florian. “Elementary Solutions of the Bernstein Problem on Two Intervals.” Journal of Mathematical Physics, Analysis, Geometry, vol. 8, no. 1, B. Verkin Institute for Low Temperature Physics and Engineering, 2012, pp. 63–78.","chicago":"Pausinger, Florian. “Elementary Solutions of the Bernstein Problem on Two Intervals.” Journal of Mathematical Physics, Analysis, Geometry. B. Verkin Institute for Low Temperature Physics and Engineering, 2012.","ama":"Pausinger F. Elementary solutions of the Bernstein problem on two intervals. Journal of Mathematical Physics, Analysis, Geometry. 2012;8(1):63-78.","ieee":"F. Pausinger, “Elementary solutions of the Bernstein problem on two intervals,” Journal of Mathematical Physics, Analysis, Geometry, vol. 8, no. 1. B. Verkin Institute for Low Temperature Physics and Engineering, pp. 63–78, 2012.","apa":"Pausinger, F. (2012). Elementary solutions of the Bernstein problem on two intervals. Journal of Mathematical Physics, Analysis, Geometry. B. Verkin Institute for Low Temperature Physics and Engineering.","ista":"Pausinger F. 2012. Elementary solutions of the Bernstein problem on two intervals. Journal of Mathematical Physics, Analysis, Geometry. 8(1), 63–78."},"publication":"Journal of Mathematical Physics, Analysis, Geometry","volume":8,"date_created":"2019-06-27T08:16:56Z","date_updated":"2023-10-16T09:41:31Z","author":[{"full_name":"Pausinger, Florian","id":"2A77D7A2-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8379-3768","first_name":"Florian","last_name":"Pausinger"}],"department":[{"_id":"HeEd"}],"publisher":"B. Verkin Institute for Low Temperature Physics and Engineering","publication_status":"published","year":"2012","acknowledgement":"This work is supported by the Austrian Science Fund (FWF), Project P22025-N18.\r\n","publication_identifier":{"issn":["1812-9471"]},"month":"01","language":[{"iso":"eng"}],"isi":1,"quality_controlled":"1","oa":1,"main_file_link":[{"url":"http://mi.mathnet.ru/eng/jmag525","open_access":"1"}],"external_id":{"isi":["000301173600004"]}},{"volume":31,"date_updated":"2023-10-16T09:54:40Z","date_created":"2018-12-11T12:01:31Z","author":[{"first_name":"Jihun","last_name":"Yu","full_name":"Yu, Jihun"},{"full_name":"Wojtan, Christopher J","orcid":"0000-0001-6646-5546","id":"3C61F1D2-F248-11E8-B48F-1D18A9856A87","last_name":"Wojtan","first_name":"Christopher J"},{"last_name":"Turk","first_name":"Greg","full_name":"Turk, Greg"},{"last_name":"Yap","first_name":"Chee","full_name":"Yap, Chee"}],"publisher":"Wiley","department":[{"_id":"ChWo"}],"publication_status":"published","year":"2012","acknowledgement":"This work was funded by NSF grant IIS-1017014 and CCF- 0917093.","publist_id":"3576","file_date_updated":"2020-07-14T12:46:00Z","language":[{"iso":"eng"}],"doi":"10.1111/j.1467-8659.2012.03062.x","conference":{"name":"EUROGRAPHICS: Conference on European Association for Computer Graphics","end_date":"2012-05-18","start_date":"2012-05-13","location":"Cagliari, Sardinia, Italy"},"quality_controlled":"1","oa":1,"publication_identifier":{"issn":["0167-7055"],"eissn":["1467-8659"]},"month":"05","file":[{"checksum":"acb325dd1e31859bedd30e013f61d0b9","date_created":"2018-12-12T10:14:39Z","date_updated":"2020-07-14T12:46:00Z","file_id":"5092","relation":"main_file","creator":"system","content_type":"application/pdf","file_size":5740527,"access_level":"open_access","file_name":"IST-2016-601-v1+1_meshSPH.pdf"}],"oa_version":"Submitted Version","pubrep_id":"601","intvolume":" 31","status":"public","title":"Explicit mesh surfaces for particle based fluids","ddc":["000"],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"3123","issue":"2","abstract":[{"lang":"eng","text":"We introduce the idea of using an explicit triangle mesh to track the air/fluid interface in a smoothed particle hydrodynamics (SPH) simulator. Once an initial surface mesh is created, this mesh is carried forward in time using nearby particle velocities to advect the mesh vertices. The mesh connectivity remains mostly unchanged across time-steps; it is only modified locally for topology change events or for the improvement of triangle quality. In order to ensure that the surface mesh does not diverge from the underlying particle simulation, we periodically project the mesh surface onto an implicit surface defined by the physics simulation. The mesh surface gives us several advantages over previous SPH surface tracking techniques. We demonstrate a new method for surface tension calculations that clearly outperforms the state of the art in SPH surface tension for computer graphics. We also demonstrate a method for tracking detailed surface information (like colors) that is less susceptible to numerical diffusion than competing techniques. Finally, our temporally-coherent surface mesh allows us to simulate high-resolution surface wave dynamics without being limited by the particle resolution of the SPH simulation."}],"alternative_title":["Eurographics"],"type":"conference","date_published":"2012-05-01T00:00:00Z","page":"815 - 824","citation":{"short":"J. Yu, C. Wojtan, G. Turk, C. Yap, in:, Computer Graphics Forum, Wiley, 2012, pp. 815–824.","mla":"Yu, Jihun, et al. “Explicit Mesh Surfaces for Particle Based Fluids.” Computer Graphics Forum, vol. 31, no. 2, Wiley, 2012, pp. 815–24, doi:10.1111/j.1467-8659.2012.03062.x.","chicago":"Yu, Jihun, Chris Wojtan, Greg Turk, and Chee Yap. “Explicit Mesh Surfaces for Particle Based Fluids.” In Computer Graphics Forum, 31:815–24. Wiley, 2012. https://doi.org/10.1111/j.1467-8659.2012.03062.x.","ama":"Yu J, Wojtan C, Turk G, Yap C. Explicit mesh surfaces for particle based fluids. In: Computer Graphics Forum. Vol 31. Wiley; 2012:815-824. doi:10.1111/j.1467-8659.2012.03062.x","apa":"Yu, J., Wojtan, C., Turk, G., & Yap, C. (2012). Explicit mesh surfaces for particle based fluids. In Computer Graphics Forum (Vol. 31, pp. 815–824). Cagliari, Sardinia, Italy: Wiley. https://doi.org/10.1111/j.1467-8659.2012.03062.x","ieee":"J. Yu, C. Wojtan, G. Turk, and C. Yap, “Explicit mesh surfaces for particle based fluids,” in Computer Graphics Forum, Cagliari, Sardinia, Italy, 2012, vol. 31, no. 2, pp. 815–824.","ista":"Yu J, Wojtan C, Turk G, Yap C. 2012. Explicit mesh surfaces for particle based fluids. Computer Graphics Forum. EUROGRAPHICS: Conference on European Association for Computer Graphics, Eurographics, vol. 31, 815–824."},"publication":"Computer Graphics Forum","has_accepted_license":"1","article_processing_charge":"No","day":"01","scopus_import":"1"},{"article_processing_charge":"No","day":"15","page":"284","article_type":"letter_note","citation":{"ista":"Danowski P. 2012. Die Zeit des Abwartens ist vorbei! BuB - Forum Bibliothek und Information. 64(4), 284.","ieee":"P. Danowski, “Die Zeit des Abwartens ist vorbei!,” BuB - Forum Bibliothek und Information, vol. 64, no. 4. Fachzeitschrift des BIB – Berufsverband Information Bibliothek, p. 284, 2012.","apa":"Danowski, P. (2012). Die Zeit des Abwartens ist vorbei! BuB - Forum Bibliothek und Information. Fachzeitschrift des BIB – Berufsverband Information Bibliothek.","ama":"Danowski P. Die Zeit des Abwartens ist vorbei! BuB - Forum Bibliothek und Information. 2012;64(4):284.","chicago":"Danowski, Patrick. “Die Zeit des Abwartens ist vorbei!” BuB - Forum Bibliothek und Information. Fachzeitschrift des BIB – Berufsverband Information Bibliothek, 2012.","mla":"Danowski, Patrick. “Die Zeit des Abwartens ist vorbei!” BuB - Forum Bibliothek und Information, vol. 64, no. 4, Fachzeitschrift des BIB – Berufsverband Information Bibliothek, 2012, p. 284.","short":"P. Danowski, BuB - Forum Bibliothek und Information 64 (2012) 284."},"publication":"BuB - Forum Bibliothek und Information","date_published":"2012-04-15T00:00:00Z","type":"journal_article","issue":"4","abstract":[{"text":"Bibliothekare haben die Aufgabe, sich mit neuen Medienformen auseinanderzusetzen.\r\n","lang":"eng"}],"intvolume":" 64","status":"public","title":"Die Zeit des Abwartens ist vorbei!","_id":"3244","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","popular_science":"1","publication_identifier":{"issn":["1869 -1137"]},"month":"04","oa":1,"main_file_link":[{"url":"https://www.b-u-b.de/fileadmin/archiv/imports/pdf_files/2012/bub_2012_04_284.pdf","open_access":"1"}],"language":[{"iso":"ger"}],"publist_id":"3432","publisher":"Fachzeitschrift des BIB – Berufsverband Information Bibliothek","department":[{"_id":"E-Lib"}],"publication_status":"published","year":"2012","volume":64,"date_created":"2018-12-11T12:02:13Z","date_updated":"2023-10-16T10:19:14Z","author":[{"full_name":"Danowski, Patrick","last_name":"Danowski","first_name":"Patrick","orcid":"0000-0002-6026-4409","id":"2EBD1598-F248-11E8-B48F-1D18A9856A87"}]},{"oa":1,"main_file_link":[{"url":"https://www.bvoe.at/sites/default/files/2022-07/BP_1_12.pdf","open_access":"1"}],"language":[{"iso":"ger"}],"month":"03","publication_identifier":{"issn":["1607-7172"]},"publication_status":"published","department":[{"_id":"E-Lib"}],"publisher":"Büchereiverband Österreichs","year":"2012","date_created":"2018-12-11T12:02:13Z","date_updated":"2023-10-16T10:40:18Z","volume":2012,"author":[{"first_name":"Patrick","last_name":"Danowski","id":"2EBD1598-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6026-4409","full_name":"Danowski, Patrick"}],"publist_id":"3433","article_type":"letter_note","page":"11","publication":"Büchereiperspektiven","citation":{"mla":"Danowski, Patrick. “Zwischen Technologie und Information.” Büchereiperspektiven, vol. 2012, no. 1, Büchereiverband Österreichs, 2012, p. 11.","short":"P. Danowski, Büchereiperspektiven 2012 (2012) 11.","chicago":"Danowski, Patrick. “Zwischen Technologie und Information.” Büchereiperspektiven. Büchereiverband Österreichs, 2012.","ama":"Danowski P. Zwischen Technologie und Information. Büchereiperspektiven. 2012;2012(1):11.","ista":"Danowski P. 2012. Zwischen Technologie und Information. Büchereiperspektiven. 2012(1), 11.","apa":"Danowski, P. (2012). Zwischen Technologie und Information. Büchereiperspektiven. Büchereiverband Österreichs.","ieee":"P. Danowski, “Zwischen Technologie und Information,” Büchereiperspektiven, vol. 2012, no. 1. Büchereiverband Österreichs, p. 11, 2012."},"date_published":"2012-03-01T00:00:00Z","day":"01","article_processing_charge":"No","status":"public","title":"Zwischen Technologie und Information","intvolume":" 2012","_id":"3243","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","popular_science":"1","type":"journal_article","abstract":[{"lang":"eng","text":"Wie wandelt sich das Berufsbild in Wissenschaftlichen Bibliotheken? Patrick Danowski gibt seine Einschätzung ab. "}],"issue":"1"},{"publist_id":"3828","type":"conference","author":[{"full_name":"Kroemer, Oliver","first_name":"Oliver","last_name":"Kroemer"},{"full_name":"Lampert, Christoph","orcid":"0000-0001-8622-7887","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87","last_name":"Lampert","first_name":"Christoph"},{"last_name":"Peters","first_name":"Jan","full_name":"Peters, Jan"}],"oa_version":"None","date_created":"2018-12-11T12:00:19Z","date_updated":"2023-10-17T07:58:59Z","_id":"2915","year":"2012","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","acknowledgement":"The project receives funding from the European Community’s Seventh Framework Programme under grant agreement\r\nno. ICT- 248273 GeRT.","department":[{"_id":"ChLa"}],"publisher":"Deutsches Zentrum für Luft und Raumfahrt","publication_status":"published","status":"public","title":"Multi-modal learning for dynamic tactile sensing","article_processing_charge":"No","day":"11","month":"10","date_published":"2012-10-11T00:00:00Z","language":[{"iso":"eng"}],"citation":{"ista":"Kroemer O, Lampert C, Peters J. 2012. Multi-modal learning for dynamic tactile sensing","apa":"Kroemer, O., Lampert, C., & Peters, J. (2012). Multi-modal learning for dynamic tactile sensing. Deutsches Zentrum für Luft und Raumfahrt.","ieee":"O. Kroemer, C. Lampert, and J. Peters, “Multi-modal learning for dynamic tactile sensing,” 2012.","ama":"Kroemer O, Lampert C, Peters J. Multi-modal learning for dynamic tactile sensing. In: Deutsches Zentrum für Luft und Raumfahrt; 2012.","chicago":"Kroemer, Oliver, Christoph Lampert, and Jan Peters. “Multi-Modal Learning for Dynamic Tactile Sensing.” Deutsches Zentrum für Luft und Raumfahrt, 2012.","mla":"Kroemer, Oliver, et al. Multi-Modal Learning for Dynamic Tactile Sensing. Deutsches Zentrum für Luft und Raumfahrt, 2012.","short":"O. Kroemer, C. Lampert, J. Peters, in:, Deutsches Zentrum für Luft und Raumfahrt, 2012."},"quality_controlled":"1"},{"_id":"2912","year":"2012","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","title":"On the configuration space for the shortest networks","status":"public","publication_status":"published","publisher":"Russian Academy of Sciences","intvolume":" 67","department":[{"_id":"HeEd"}],"author":[{"full_name":"Edelsbrunner, Herbert","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-9823-6833","first_name":"Herbert","last_name":"Edelsbrunner"},{"full_name":"Strelkova, Nataliya","last_name":"Strelkova","first_name":"Nataliya"}],"date_created":"2018-12-11T12:00:18Z","date_updated":"2023-10-17T11:40:39Z","oa_version":"None","volume":67,"type":"journal_article","publist_id":"3831","issue":"6","publication":"Russian Mathematical Surveys","citation":{"chicago":"Edelsbrunner, Herbert, and Nataliya Strelkova. “On the Configuration Space for the Shortest Networks.” Russian Mathematical Surveys. Russian Academy of Sciences, 2012. https://doi.org/10.4213/rm9503.","mla":"Edelsbrunner, Herbert, and Nataliya Strelkova. “On the Configuration Space for the Shortest Networks.” Russian Mathematical Surveys, vol. 67, no. 6, Russian Academy of Sciences, 2012, pp. 1167–1168, doi:10.4213/rm9503.","short":"H. Edelsbrunner, N. Strelkova, Russian Mathematical Surveys 67 (2012) 1167–1168.","ista":"Edelsbrunner H, Strelkova N. 2012. On the configuration space for the shortest networks. Russian Mathematical Surveys. 67(6), 1167–1168.","ieee":"H. Edelsbrunner and N. Strelkova, “On the configuration space for the shortest networks,” Russian Mathematical Surveys, vol. 67, no. 6. Russian Academy of Sciences, pp. 1167–1168, 2012.","apa":"Edelsbrunner, H., & Strelkova, N. (2012). On the configuration space for the shortest networks. Russian Mathematical Surveys. Russian Academy of Sciences. https://doi.org/10.4213/rm9503","ama":"Edelsbrunner H, Strelkova N. On the configuration space for the shortest networks. Russian Mathematical Surveys. 2012;67(6):1167–1168. doi:10.4213/rm9503"},"quality_controlled":"1","page":"1167–1168","doi":"10.4213/rm9503","date_published":"2012-10-01T00:00:00Z","language":[{"iso":"eng"}],"day":"01","month":"10","article_processing_charge":"No"},{"quality_controlled":"1","page":"211-218","publication":"Proceedings of the 29th International Conference on Machine Learning","citation":{"ama":"Quadrianto N, Lampert C, Chen C. The most persistent soft-clique in a set of sampled graphs. In: Proceedings of the 29th International Conference on Machine Learning. ML Research Press; 2012:211-218.","ista":"Quadrianto N, Lampert C, Chen C. 2012. The most persistent soft-clique in a set of sampled graphs. Proceedings of the 29th International Conference on Machine Learning. ICML: International Conference on Machine Learning, 211–218.","apa":"Quadrianto, N., Lampert, C., & Chen, C. (2012). The most persistent soft-clique in a set of sampled graphs. In Proceedings of the 29th International Conference on Machine Learning (pp. 211–218). Edinburgh, United Kingdom: ML Research Press.","ieee":"N. Quadrianto, C. Lampert, and C. Chen, “The most persistent soft-clique in a set of sampled graphs,” in Proceedings of the 29th International Conference on Machine Learning, Edinburgh, United Kingdom, 2012, pp. 211–218.","mla":"Quadrianto, Novi, et al. “The Most Persistent Soft-Clique in a Set of Sampled Graphs.” Proceedings of the 29th International Conference on Machine Learning, ML Research Press, 2012, pp. 211–18.","short":"N. Quadrianto, C. Lampert, C. Chen, in:, Proceedings of the 29th International Conference on Machine Learning, ML Research Press, 2012, pp. 211–218.","chicago":"Quadrianto, Novi, Christoph Lampert, and Chao Chen. “The Most Persistent Soft-Clique in a Set of Sampled Graphs.” In Proceedings of the 29th International Conference on Machine Learning, 211–18. ML Research Press, 2012."},"oa":1,"main_file_link":[{"open_access":"1","url":"http://arxiv.org/abs/1206.4652"}],"language":[{"iso":"eng"}],"conference":{"start_date":"2012-06-26","location":"Edinburgh, United Kingdom","end_date":"2012-07-01","name":"ICML: International Conference on Machine Learning"},"date_published":"2012-06-01T00:00:00Z","scopus_import":"1","day":"01","month":"06","article_processing_charge":"No","publication_status":"published","title":"The most persistent soft-clique in a set of sampled graphs","status":"public","publisher":"ML Research Press","department":[{"_id":"ChLa"},{"_id":"HeEd"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"3127","year":"2012","date_created":"2018-12-11T12:01:33Z","date_updated":"2023-10-17T11:55:06Z","oa_version":"Preprint","author":[{"last_name":"Quadrianto","first_name":"Novi","full_name":"Quadrianto, Novi"},{"first_name":"Christoph","last_name":"Lampert","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-8622-7887","full_name":"Lampert, Christoph"},{"full_name":"Chen, Chao","id":"3E92416E-F248-11E8-B48F-1D18A9856A87","last_name":"Chen","first_name":"Chao"}],"type":"conference","abstract":[{"lang":"eng","text":"When searching for characteristic subpatterns in potentially noisy graph data, it appears self-evident that having multiple observations would be better than having just one. However, it turns out that the inconsistencies introduced when different graph instances have different edge sets pose a serious challenge. In this work we address this challenge for the problem of finding maximum weighted cliques.\r\n We introduce the concept of most persistent soft-clique. This is subset of vertices, that 1) is almost fully or at least densely connected, 2) occurs in all or almost all graph instances, and 3) has the maximum weight. We present a measure of clique-ness, that essentially counts the number of edge missing to make a subset of vertices into a clique. With this measure, we show that the problem of finding the most persistent soft-clique problem can be cast either as: a) a max-min two person game optimization problem, or b) a min-min soft margin optimization problem. Both formulations lead to the same solution when using a partial Lagrangian method to solve the optimization problems. By experiments on synthetic data and on real social network data, we show that the proposed method is able to reliably find soft cliques in graph data, even if that is distorted by random noise or unreliable observations."}],"publist_id":"3572"},{"quality_controlled":"1","oa":1,"language":[{"iso":"eng"}],"doi":"10.5802/jtnb.819","month":"01","publication_identifier":{"eissn":["2118-8572"],"issn":["1246-7405"]},"publication_status":"published","department":[{"_id":"HeEd"}],"publisher":"Université de Bordeaux","year":"2012","date_created":"2018-12-11T12:00:15Z","date_updated":"2023-10-18T07:53:47Z","volume":24,"author":[{"orcid":"0000-0002-8379-3768","id":"2A77D7A2-F248-11E8-B48F-1D18A9856A87","last_name":"Pausinger","first_name":"Florian","full_name":"Pausinger, Florian"}],"file_date_updated":"2020-07-14T12:45:52Z","publist_id":"3843","article_type":"original","page":"729 - 749","publication":"Journal de Theorie des Nombres des Bordeaux","citation":{"ama":"Pausinger F. Weak multipliers for generalized van der Corput sequences. Journal de Theorie des Nombres des Bordeaux. 2012;24(3):729-749. doi:10.5802/jtnb.819","ista":"Pausinger F. 2012. Weak multipliers for generalized van der Corput sequences. Journal de Theorie des Nombres des Bordeaux. 24(3), 729–749.","ieee":"F. Pausinger, “Weak multipliers for generalized van der Corput sequences,” Journal de Theorie des Nombres des Bordeaux, vol. 24, no. 3. Université de Bordeaux, pp. 729–749, 2012.","apa":"Pausinger, F. (2012). Weak multipliers for generalized van der Corput sequences. Journal de Theorie Des Nombres Des Bordeaux. Université de Bordeaux. https://doi.org/10.5802/jtnb.819","mla":"Pausinger, Florian. “Weak Multipliers for Generalized van Der Corput Sequences.” Journal de Theorie Des Nombres Des Bordeaux, vol. 24, no. 3, Université de Bordeaux, 2012, pp. 729–49, doi:10.5802/jtnb.819.","short":"F. Pausinger, Journal de Theorie Des Nombres Des Bordeaux 24 (2012) 729–749.","chicago":"Pausinger, Florian. “Weak Multipliers for Generalized van Der Corput Sequences.” Journal de Theorie Des Nombres Des Bordeaux. Université de Bordeaux, 2012. https://doi.org/10.5802/jtnb.819."},"date_published":"2012-01-01T00:00:00Z","scopus_import":"1","day":"01","article_processing_charge":"No","has_accepted_license":"1","ddc":["510"],"status":"public","title":"Weak multipliers for generalized van der Corput sequences","intvolume":" 24","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"2904","file":[{"date_created":"2020-05-11T12:40:39Z","date_updated":"2020-07-14T12:45:52Z","checksum":"6954bfe9d7f4119fbdda7a11cf0f5c67","relation":"main_file","file_id":"7819","content_type":"application/pdf","file_size":819275,"creator":"dernst","file_name":"JTNB_2012__24_3_729_0.pdf","access_level":"open_access"}],"oa_version":"Published Version","type":"journal_article","abstract":[{"text":"Generalized van der Corput sequences are onedimensional, infinite sequences in the unit interval. They are generated from permutations in integer base b and are the building blocks of the multi-dimensional Halton sequences. Motivated by recent progress of Atanassov on the uniform distribution behavior of Halton sequences, we study, among others, permutations of the form P(i) = ai (mod b) for coprime integers a and b. We show that multipliers a that either divide b - 1 or b + 1 generate van der Corput sequences with weak distribution properties. We give explicit lower bounds for the asymptotic distribution behavior of these sequences and relate them to sequences generated from the identity permutation in smaller bases, which are, due to Faure, the weakest distributed generalized van der Corput sequences.","lang":"eng"},{"lang":"fre","text":"Les suites de Van der Corput généralisées sont dessuites unidimensionnelles et infinies dans l’intervalle de l’unité.Elles sont générées par permutations des entiers de la basebetsont les éléments constitutifs des suites multi-dimensionnelles deHalton. Suites aux progrès récents d’Atanassov concernant le com-portement de distribution uniforme des suites de Halton nous nousintéressons aux permutations de la formuleP(i) =ai(modb)pour les entiers premiers entre euxaetb. Dans cet article nousidentifions des multiplicateursagénérant des suites de Van derCorput ayant une mauvaise distribution. Nous donnons les bornesinférieures explicites pour cette distribution asymptotique asso-ciée à ces suites et relions ces dernières aux suites générées parpermutation d’identité, qui sont, selon Faure, les moins bien dis-tribuées des suites généralisées de Van der Corput dans une basedonnée."}],"issue":"3"},{"type":"journal_article","publist_id":"3845","issue":"6","abstract":[{"lang":"eng","text":"We present an algorithm for simplifying linear cartographic objects and results obtained with a computer program implementing this algorithm. "}],"publisher":"Russian Academy of Sciences","department":[{"_id":"HeEd"}],"intvolume":" 19","publication_status":"published","status":"public","title":"Fractal and computational geometry for generalizing cartographic objects","_id":"2902","year":"2012","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","volume":19,"date_created":"2018-12-11T12:00:15Z","date_updated":"2023-10-18T07:34:45Z","author":[{"orcid":"0000-0002-9823-6833","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87","last_name":"Edelsbrunner","first_name":"Herbert","full_name":"Edelsbrunner, Herbert"},{"full_name":"Musin, Oleg","first_name":"Oleg","last_name":"Musin"},{"first_name":"Alexey","last_name":"Ukhalov","full_name":"Ukhalov, Alexey"},{"first_name":"Olga","last_name":"Yakimova","full_name":"Yakimova, Olga"},{"full_name":"Alexeev, Vladislav","last_name":"Alexeev","first_name":"Vladislav"},{"last_name":"Bogaevskaya","first_name":"Victoriya","full_name":"Bogaevskaya, Victoriya"},{"last_name":"Gorohov","first_name":"Andrey","full_name":"Gorohov, Andrey"},{"full_name":"Preobrazhenskaya, Margarita","last_name":"Preobrazhenskaya","first_name":"Margarita"}],"article_processing_charge":"No","month":"12","day":"01","page":"152 - 160","quality_controlled":"1","article_type":"original","oa":1,"citation":{"ista":"Edelsbrunner H, Musin O, Ukhalov A, Yakimova O, Alexeev V, Bogaevskaya V, Gorohov A, Preobrazhenskaya M. 2012. Fractal and computational geometry for generalizing cartographic objects. Modeling and Analysis of Information Systems. 19(6), 152–160.","apa":"Edelsbrunner, H., Musin, O., Ukhalov, A., Yakimova, O., Alexeev, V., Bogaevskaya, V., … Preobrazhenskaya, M. (2012). Fractal and computational geometry for generalizing cartographic objects. Modeling and Analysis of Information Systems. Russian Academy of Sciences.","ieee":"H. Edelsbrunner et al., “Fractal and computational geometry for generalizing cartographic objects,” Modeling and Analysis of Information Systems, vol. 19, no. 6. Russian Academy of Sciences, pp. 152–160, 2012.","ama":"Edelsbrunner H, Musin O, Ukhalov A, et al. Fractal and computational geometry for generalizing cartographic objects. Modeling and Analysis of Information Systems. 2012;19(6):152-160.","chicago":"Edelsbrunner, Herbert, Oleg Musin, Alexey Ukhalov, Olga Yakimova, Vladislav Alexeev, Victoriya Bogaevskaya, Andrey Gorohov, and Margarita Preobrazhenskaya. “Fractal and computational geometry for generalizing cartographic objects.” Modeling and Analysis of Information Systems. Russian Academy of Sciences, 2012.","mla":"Edelsbrunner, Herbert, et al. “Fractal and computational geometry for generalizing cartographic objects.” Modeling and Analysis of Information Systems, vol. 19, no. 6, Russian Academy of Sciences, 2012, pp. 152–60.","short":"H. Edelsbrunner, O. Musin, A. Ukhalov, O. Yakimova, V. Alexeev, V. Bogaevskaya, A. Gorohov, M. Preobrazhenskaya, Modeling and Analysis of Information Systems 19 (2012) 152–160."},"main_file_link":[{"url":"http://mi.mathnet.ru/eng/mais280","open_access":"1"}],"publication":"Modeling and Analysis of Information Systems","language":[{"iso":"rus"}],"date_published":"2012-12-01T00:00:00Z"}]