[{"language":[{"iso":"eng"}],"article_type":"original","day":"21","extern":"1","author":[{"full_name":"Thimmappa, Ravikumar","last_name":"Thimmappa","first_name":"Ravikumar"},{"last_name":"Chattanahalli Devendrachari","full_name":"Chattanahalli Devendrachari, Mruthyunjayachari","first_name":"Mruthyunjayachari"},{"first_name":"Shahid","last_name":"Shafi","full_name":"Shafi, Shahid"},{"last_name":"Freunberger","full_name":"Freunberger, Stefan Alexander","first_name":"Stefan Alexander","id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","orcid":"0000-0003-2902-5319"},{"first_name":"Musthafa","full_name":"Ottakam Thotiyl, Musthafa","last_name":"Ottakam Thotiyl"}],"citation":{"ieee":"R. Thimmappa, M. Chattanahalli Devendrachari, S. Shafi, S. A. Freunberger, and M. Ottakam Thotiyl, “Proton conducting hollow graphene oxide cylinder as molecular fuel barrier for tubular H2-air fuel cell,” <i>International Journal of Hydrogen Energy</i>, vol. 41, no. 47. Elsevier, pp. 22305–22315, 2016.","apa":"Thimmappa, R., Chattanahalli Devendrachari, M., Shafi, S., Freunberger, S. A., &#38; Ottakam Thotiyl, M. (2016). Proton conducting hollow graphene oxide cylinder as molecular fuel barrier for tubular H2-air fuel cell. <i>International Journal of Hydrogen Energy</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.ijhydene.2016.08.057\">https://doi.org/10.1016/j.ijhydene.2016.08.057</a>","mla":"Thimmappa, Ravikumar, et al. “Proton Conducting Hollow Graphene Oxide Cylinder as Molecular Fuel Barrier for Tubular H2-Air Fuel Cell.” <i>International Journal of Hydrogen Energy</i>, vol. 41, no. 47, Elsevier, 2016, pp. 22305–15, doi:<a href=\"https://doi.org/10.1016/j.ijhydene.2016.08.057\">10.1016/j.ijhydene.2016.08.057</a>.","short":"R. Thimmappa, M. Chattanahalli Devendrachari, S. Shafi, S.A. Freunberger, M. Ottakam Thotiyl, International Journal of Hydrogen Energy 41 (2016) 22305–22315.","ista":"Thimmappa R, Chattanahalli Devendrachari M, Shafi S, Freunberger SA, Ottakam Thotiyl M. 2016. Proton conducting hollow graphene oxide cylinder as molecular fuel barrier for tubular H2-air fuel cell. International Journal of Hydrogen Energy. 41(47), 22305–22315.","chicago":"Thimmappa, Ravikumar, Mruthyunjayachari Chattanahalli Devendrachari, Shahid Shafi, Stefan Alexander Freunberger, and Musthafa Ottakam Thotiyl. “Proton Conducting Hollow Graphene Oxide Cylinder as Molecular Fuel Barrier for Tubular H2-Air Fuel Cell.” <i>International Journal of Hydrogen Energy</i>. Elsevier, 2016. <a href=\"https://doi.org/10.1016/j.ijhydene.2016.08.057\">https://doi.org/10.1016/j.ijhydene.2016.08.057</a>.","ama":"Thimmappa R, Chattanahalli Devendrachari M, Shafi S, Freunberger SA, Ottakam Thotiyl M. Proton conducting hollow graphene oxide cylinder as molecular fuel barrier for tubular H2-air fuel cell. <i>International Journal of Hydrogen Energy</i>. 2016;41(47):22305-22315. doi:<a href=\"https://doi.org/10.1016/j.ijhydene.2016.08.057\">10.1016/j.ijhydene.2016.08.057</a>"},"publication":"International Journal of Hydrogen Energy","title":"Proton conducting hollow graphene oxide cylinder as molecular fuel barrier for tubular H2-air fuel cell","publication_status":"published","publisher":"Elsevier","intvolume":"        41","page":"22305-22315","date_created":"2020-01-15T12:15:57Z","volume":41,"publication_identifier":{"issn":["0360-3199"]},"abstract":[{"lang":"eng","text":"If proton exchange membrane fuel cells (PEMFC) are ever to succeed in sustainable energy landscape as a potential zero emission technology, it is inevitable to reduce electricity production cost associated mainly with its MEAs, cell hardware and gas storage units. We demonstrate a diverse strategy for achieving this target with a concomitant amplification of its specific energy and power, by rolling a thin graphene oxide (GO) based MEA alone into a tubular and air breathing architecture with internal fuel storage. The unique properties of GO being a barrier for molecular fuels and proton conducting to construct a GO based cylindrical MEA. This makes the tubular PEMFC ∼75 times lighter, featuring ∼37 and ∼92 times respectively, the power and energy per overall weight, making it a potential candidate for portable applications. The intrinsic electrochemical kinetics at the three-phase boundary are somewhat affected by the bending of the MEA, albeit at overall reduction in power production cost."}],"year":"2016","date_published":"2016-12-21T00:00:00Z","type":"journal_article","status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","issue":"47","doi":"10.1016/j.ijhydene.2016.08.057","month":"12","oa_version":"None","date_updated":"2021-01-12T08:12:49Z","quality_controlled":"1","_id":"7293"},{"citation":{"apa":"Escamilla-Pérez, A. M., Louvain, N., Kaschowitz, M., Freunberger, S. A., Fontaine, O., Boury, B., … Mutin, P. H. (2016). Lithium insertion properties of mesoporous nanocrystalline TiO2 and TiO2–V2O5 microspheres prepared by non-hydrolytic sol–gel. <i>Journal of Sol-Gel Science and Technology</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s10971-016-4037-9\">https://doi.org/10.1007/s10971-016-4037-9</a>","ieee":"A. M. Escamilla-Pérez <i>et al.</i>, “Lithium insertion properties of mesoporous nanocrystalline TiO2 and TiO2–V2O5 microspheres prepared by non-hydrolytic sol–gel,” <i>Journal of Sol-Gel Science and Technology</i>, vol. 79, no. 2. Springer Nature, pp. 270–278, 2016.","ama":"Escamilla-Pérez AM, Louvain N, Kaschowitz M, et al. Lithium insertion properties of mesoporous nanocrystalline TiO2 and TiO2–V2O5 microspheres prepared by non-hydrolytic sol–gel. <i>Journal of Sol-Gel Science and Technology</i>. 2016;79(2):270-278. doi:<a href=\"https://doi.org/10.1007/s10971-016-4037-9\">10.1007/s10971-016-4037-9</a>","chicago":"Escamilla-Pérez, A. M., N. Louvain, M. Kaschowitz, Stefan Alexander Freunberger, O. Fontaine, B. Boury, N. Brun, and P. H. Mutin. “Lithium Insertion Properties of Mesoporous Nanocrystalline TiO2 and TiO2–V2O5 Microspheres Prepared by Non-Hydrolytic Sol–Gel.” <i>Journal of Sol-Gel Science and Technology</i>. Springer Nature, 2016. <a href=\"https://doi.org/10.1007/s10971-016-4037-9\">https://doi.org/10.1007/s10971-016-4037-9</a>.","short":"A.M. Escamilla-Pérez, N. Louvain, M. Kaschowitz, S.A. Freunberger, O. Fontaine, B. Boury, N. Brun, P.H. Mutin, Journal of Sol-Gel Science and Technology 79 (2016) 270–278.","ista":"Escamilla-Pérez AM, Louvain N, Kaschowitz M, Freunberger SA, Fontaine O, Boury B, Brun N, Mutin PH. 2016. Lithium insertion properties of mesoporous nanocrystalline TiO2 and TiO2–V2O5 microspheres prepared by non-hydrolytic sol–gel. Journal of Sol-Gel Science and Technology. 79(2), 270–278.","mla":"Escamilla-Pérez, A. M., et al. “Lithium Insertion Properties of Mesoporous Nanocrystalline TiO2 and TiO2–V2O5 Microspheres Prepared by Non-Hydrolytic Sol–Gel.” <i>Journal of Sol-Gel Science and Technology</i>, vol. 79, no. 2, Springer Nature, 2016, pp. 270–78, doi:<a href=\"https://doi.org/10.1007/s10971-016-4037-9\">10.1007/s10971-016-4037-9</a>."},"publication":"Journal of Sol-Gel Science and Technology","author":[{"first_name":"A. M.","last_name":"Escamilla-Pérez","full_name":"Escamilla-Pérez, A. M."},{"last_name":"Louvain","full_name":"Louvain, N.","first_name":"N."},{"first_name":"M.","full_name":"Kaschowitz, M.","last_name":"Kaschowitz"},{"orcid":"0000-0003-2902-5319","first_name":"Stefan Alexander","id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","full_name":"Freunberger, Stefan Alexander","last_name":"Freunberger"},{"full_name":"Fontaine, O.","last_name":"Fontaine","first_name":"O."},{"first_name":"B.","full_name":"Boury, B.","last_name":"Boury"},{"full_name":"Brun, N.","last_name":"Brun","first_name":"N."},{"last_name":"Mutin","full_name":"Mutin, P. H.","first_name":"P. H."}],"title":"Lithium insertion properties of mesoporous nanocrystalline TiO2 and TiO2–V2O5 microspheres prepared by non-hydrolytic sol–gel","publication_status":"published","language":[{"iso":"eng"}],"article_type":"original","extern":"1","day":"08","date_created":"2020-01-15T12:16:08Z","abstract":[{"text":"Mesoporous nanocrystalline TiO2 and TiO2–V2O5 microspheres were prepared by non-hydrolytic sol–gel from TiCl4, VOCl3, and iPr2O at 110 °C without any solvent or additives. The samples were characterized by elemental analysis, X-ray diffraction, Raman spectroscopy, scanning electron microscopy, nitrogen physisorption, and impedance measurements. At low vanadium loadings, only TiO2 anatase was detected, and V2O5 scherbinaite was also detected at high vanadium loadings. The texture of the samples depended on the V loading, but all the samples appeared built of primary nanoparticles (≈10–20 nm in size) that aggregate to form mesoporous micron-sized spheres. The lithium insertion properties of these materials were evaluated by galvanostatic measurements taken using coin-type cells, in view of their application as electrode for rechargeable Li-ion batteries. The mesoporous TiO2 microspheres showed good performances, with a specific reversible capacity of 145 and 128 mAh g−1 at C/2 and C, respectively (C = 335.6 mA g−1), good coulombic efficiency, and a moderate capacity fade (6 %) from the 2nd to the 20th cycle at C/20. Although the addition of V effectively increased the electronic conductivity of the powders, the specific reversible capacity and cycling performances of the TiO2–V2O5 samples were only minimally improved for a 5 at% V loading and were lower at higher V loading.","lang":"eng"}],"volume":79,"publication_identifier":{"issn":["0928-0707","1573-4846"]},"page":"270-278","intvolume":"        79","publisher":"Springer Nature","article_processing_charge":"No","year":"2016","date_published":"2016-04-08T00:00:00Z","type":"journal_article","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","oa_version":"None","date_updated":"2021-01-12T08:12:49Z","quality_controlled":"1","_id":"7294","issue":"2","doi":"10.1007/s10971-016-4037-9","month":"04"},{"page":"513-523","publisher":"Elsevier","intvolume":"       206","date_created":"2020-01-15T12:16:17Z","publication_identifier":{"issn":["0013-4686"]},"abstract":[{"text":"Redox ionic liquids consisting of ions bearing redox moieties are receiving increasing interest in electrochemical applications, as they associate electroactive properties with the classical properties of ionic liquids. Here, biredox ionic liquid electrolytes are described in which both anion and cation are functionalized with anthraquinone and 2,2,6,6-tetramethylpiperidinyl-1-oxyl (TEMPO) groups, respectively. In-depth investigations based on crossed experimental and theoretical studies were carried out to elucidate how the bulkiness of ions bearing a redox moiety impacted electron and mass transfers, and accordingly the efficiency of electrochemical devices. The values of solvated radii of different redox ions, as well as the related kinetic constants, were extracted from cyclic voltammetry experiments. Reformulating the basic relations of electron transfer theory (based on Marcus-Hush theory) evidenced that in such redox species, with an unsymmetrical located redox centre, the electron transfer was not governed by the overall size of the solvated redox species, but rather by the radius of the redox active subunit, which takes preferential orientation towards the surface, thus allowing higher kinetic constants than what classical theory would predict. This vision opens ample opportunities for biredox ILs as electrolytes in electrochemical devices.","lang":"eng"}],"volume":206,"day":"10","extern":"1","language":[{"iso":"eng"}],"article_type":"original","publication_status":"published","title":"Biredox ionic liquids: Electrochemical investigation and impact of ion size on electron transfer","author":[{"first_name":"Eléonore","full_name":"Mourad, Eléonore","last_name":"Mourad"},{"full_name":"Coustan, Laura","last_name":"Coustan","first_name":"Laura"},{"first_name":"Stefan Alexander","id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","orcid":"0000-0003-2902-5319","last_name":"Freunberger","full_name":"Freunberger, Stefan Alexander"},{"full_name":"Mehdi, Ahmad","last_name":"Mehdi","first_name":"Ahmad"},{"full_name":"Vioux, André","last_name":"Vioux","first_name":"André"},{"last_name":"Favier","full_name":"Favier, Frédérique","first_name":"Frédérique"},{"last_name":"Fontaine","full_name":"Fontaine, Olivier","first_name":"Olivier"}],"citation":{"mla":"Mourad, Eléonore, et al. “Biredox Ionic Liquids: Electrochemical Investigation and Impact of Ion Size on Electron Transfer.” <i>Electrochimica Acta</i>, vol. 206, no. 7, Elsevier, 2016, pp. 513–23, doi:<a href=\"https://doi.org/10.1016/j.electacta.2016.02.211\">10.1016/j.electacta.2016.02.211</a>.","ista":"Mourad E, Coustan L, Freunberger SA, Mehdi A, Vioux A, Favier F, Fontaine O. 2016. Biredox ionic liquids: Electrochemical investigation and impact of ion size on electron transfer. Electrochimica Acta. 206(7), 513–523.","short":"E. Mourad, L. Coustan, S.A. Freunberger, A. Mehdi, A. Vioux, F. Favier, O. Fontaine, Electrochimica Acta 206 (2016) 513–523.","chicago":"Mourad, Eléonore, Laura Coustan, Stefan Alexander Freunberger, Ahmad Mehdi, André Vioux, Frédérique Favier, and Olivier Fontaine. “Biredox Ionic Liquids: Electrochemical Investigation and Impact of Ion Size on Electron Transfer.” <i>Electrochimica Acta</i>. Elsevier, 2016. <a href=\"https://doi.org/10.1016/j.electacta.2016.02.211\">https://doi.org/10.1016/j.electacta.2016.02.211</a>.","ama":"Mourad E, Coustan L, Freunberger SA, et al. Biredox ionic liquids: Electrochemical investigation and impact of ion size on electron transfer. <i>Electrochimica Acta</i>. 2016;206(7):513-523. doi:<a href=\"https://doi.org/10.1016/j.electacta.2016.02.211\">10.1016/j.electacta.2016.02.211</a>","ieee":"E. Mourad <i>et al.</i>, “Biredox ionic liquids: Electrochemical investigation and impact of ion size on electron transfer,” <i>Electrochimica Acta</i>, vol. 206, no. 7. Elsevier, pp. 513–523, 2016.","apa":"Mourad, E., Coustan, L., Freunberger, S. A., Mehdi, A., Vioux, A., Favier, F., &#38; Fontaine, O. (2016). Biredox ionic liquids: Electrochemical investigation and impact of ion size on electron transfer. <i>Electrochimica Acta</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.electacta.2016.02.211\">https://doi.org/10.1016/j.electacta.2016.02.211</a>"},"publication":"Electrochimica Acta","doi":"10.1016/j.electacta.2016.02.211","month":"07","issue":"7","quality_controlled":"1","date_updated":"2021-01-12T08:12:50Z","_id":"7295","oa_version":"None","type":"journal_article","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","date_published":"2016-07-10T00:00:00Z","year":"2016","article_processing_charge":"No"},{"license":"https://creativecommons.org/licenses/by/4.0/","date_created":"2020-01-15T12:16:31Z","abstract":[{"text":"Within the scope of developing a multi-physical model describing battery behavior during and after the mechanical load (accelerations, intrusions) of a vehicle’s high voltage battery, an internal short circuit model is of deep interest for a virtual hazard assessment. The internal short resistance and the size of the affected area must be known as a minimum for determining the released heat and, in consequence, the temperatures. The internal short resistance of purpose-built dummy pouch cells, filled with electrolyte-like solvent without conductive salt, has thus been measured in a given short area under various compressive loads. The resistances for different short scenarios obtained are analyzed and described in a mathematical form. Short circuit experiments with dummy cells using an external power source have also been carried out. This set-up allows the measurement of the temperature evolution at a known current and a determination of the actual short resistance. The post-mortem analysis of the samples shows a correlation between the maximum temperatures, released short heat and the separator melt diameter.","lang":"eng"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"article_type":"original","extern":"1","citation":{"mla":"Volck, Theo, et al. “Method for Determination of the Internal Short Resistance and Heat Evolution at Different Mechanical Loads of a Lithium Ion Battery Cell Based on Dummy Pouch Cells.” <i>Batteries</i>, vol. 2, no. 2, 8, MDPI AG, 2016, doi:<a href=\"https://doi.org/10.3390/batteries2020008\">10.3390/batteries2020008</a>.","chicago":"Volck, Theo, Wolfgang Sinz, Gregor Gstrein, Christoph Breitfuss, Simon Heindl, Hermann Steffan, Stefan Alexander Freunberger, et al. “Method for Determination of the Internal Short Resistance and Heat Evolution at Different Mechanical Loads of a Lithium Ion Battery Cell Based on Dummy Pouch Cells.” <i>Batteries</i>. MDPI AG, 2016. <a href=\"https://doi.org/10.3390/batteries2020008\">https://doi.org/10.3390/batteries2020008</a>.","ama":"Volck T, Sinz W, Gstrein G, et al. Method for determination of the internal short resistance and heat evolution at different mechanical loads of a Lithium ion battery cell based on dummy pouch cells. <i>Batteries</i>. 2016;2(2). doi:<a href=\"https://doi.org/10.3390/batteries2020008\">10.3390/batteries2020008</a>","ista":"Volck T, Sinz W, Gstrein G, Breitfuss C, Heindl S, Steffan H, Freunberger SA, Wilkening M, Uitz M, Fink C, Geier A. 2016. Method for determination of the internal short resistance and heat evolution at different mechanical loads of a Lithium ion battery cell based on dummy pouch cells. Batteries. 2(2), 8.","short":"T. Volck, W. Sinz, G. Gstrein, C. Breitfuss, S. Heindl, H. Steffan, S.A. Freunberger, M. Wilkening, M. Uitz, C. Fink, A. Geier, Batteries 2 (2016).","ieee":"T. Volck <i>et al.</i>, “Method for determination of the internal short resistance and heat evolution at different mechanical loads of a Lithium ion battery cell based on dummy pouch cells,” <i>Batteries</i>, vol. 2, no. 2. MDPI AG, 2016.","apa":"Volck, T., Sinz, W., Gstrein, G., Breitfuss, C., Heindl, S., Steffan, H., … Geier, A. (2016). Method for determination of the internal short resistance and heat evolution at different mechanical loads of a Lithium ion battery cell based on dummy pouch cells. <i>Batteries</i>. MDPI AG. <a href=\"https://doi.org/10.3390/batteries2020008\">https://doi.org/10.3390/batteries2020008</a>"},"author":[{"first_name":"Theo","full_name":"Volck, Theo","last_name":"Volck"},{"last_name":"Sinz","full_name":"Sinz, Wolfgang","first_name":"Wolfgang"},{"first_name":"Gregor","full_name":"Gstrein, Gregor","last_name":"Gstrein"},{"last_name":"Breitfuss","full_name":"Breitfuss, Christoph","first_name":"Christoph"},{"last_name":"Heindl","full_name":"Heindl, Simon","first_name":"Simon"},{"last_name":"Steffan","full_name":"Steffan, Hermann","first_name":"Hermann"},{"orcid":"0000-0003-2902-5319","id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","first_name":"Stefan Alexander","full_name":"Freunberger, Stefan Alexander","last_name":"Freunberger"},{"last_name":"Wilkening","full_name":"Wilkening, Martin","first_name":"Martin"},{"first_name":"Marlena","full_name":"Uitz, Marlena","last_name":"Uitz"},{"first_name":"Clemens","last_name":"Fink","full_name":"Fink, Clemens"},{"first_name":"Alexander","full_name":"Geier, Alexander","last_name":"Geier"}],"title":"Method for determination of the internal short resistance and heat evolution at different mechanical loads of a Lithium ion battery cell based on dummy pouch cells","oa":1,"oa_version":"Published Version","year":"2016","OA_place":"publisher","article_number":"8","publisher":"MDPI AG","intvolume":"         2","publication_identifier":{"issn":["2313-0105"]},"volume":2,"language":[{"iso":"eng"}],"day":"07","publication":"Batteries","publication_status":"published","ddc":["540"],"issue":"2","month":"04","doi":"10.3390/batteries2020008","date_updated":"2025-05-20T06:19:52Z","quality_controlled":"1","_id":"7296","OA_type":"gold","date_published":"2016-04-07T00:00:00Z","type":"journal_article","main_file_link":[{"open_access":"1","url":"https://doi.org/10.3390/batteries2020008"}],"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"Yes"},{"date_created":"2020-01-15T12:16:40Z","file_date_updated":"2020-07-14T12:47:55Z","abstract":[{"text":"Redox mediators facilitate the oxidation of the highly insulating discharge product in metal–oxygen batteries during recharge and offer opportunities to achieve high reversible capacities. Now a design principle for selecting redox mediators that can recharge the batteries more efficiently is suggested.","lang":"eng"}],"title":"Batteries: Charging ahead rationally","author":[{"orcid":"0000-0003-2902-5319","first_name":"Stefan Alexander","id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","full_name":"Freunberger, Stefan Alexander","last_name":"Freunberger"}],"citation":{"chicago":"Freunberger, Stefan Alexander. “Batteries: Charging Ahead Rationally.” <i>Nature Energy</i>. Springer Nature, 2016. <a href=\"https://doi.org/10.1038/nenergy.2016.74\">https://doi.org/10.1038/nenergy.2016.74</a>.","ama":"Freunberger SA. Batteries: Charging ahead rationally. <i>Nature Energy</i>. 2016;1(6). doi:<a href=\"https://doi.org/10.1038/nenergy.2016.74\">10.1038/nenergy.2016.74</a>","short":"S.A. Freunberger, Nature Energy 1 (2016).","ista":"Freunberger SA. 2016. Batteries: Charging ahead rationally. Nature Energy. 1(6), 16074.","mla":"Freunberger, Stefan Alexander. “Batteries: Charging Ahead Rationally.” <i>Nature Energy</i>, vol. 1, no. 6, 16074, Springer Nature, 2016, doi:<a href=\"https://doi.org/10.1038/nenergy.2016.74\">10.1038/nenergy.2016.74</a>.","apa":"Freunberger, S. A. (2016). Batteries: Charging ahead rationally. <i>Nature Energy</i>. Springer Nature. <a href=\"https://doi.org/10.1038/nenergy.2016.74\">https://doi.org/10.1038/nenergy.2016.74</a>","ieee":"S. A. Freunberger, “Batteries: Charging ahead rationally,” <i>Nature Energy</i>, vol. 1, no. 6. Springer Nature, 2016."},"extern":"1","file":[{"file_name":"N&V Freunberger final.pdf","relation":"main_file","date_updated":"2020-07-14T12:47:55Z","file_size":197375,"checksum":"d90d675947262f7437b483b251918df2","access_level":"open_access","date_created":"2020-06-29T13:41:56Z","file_id":"8047","creator":"sfreunbe","content_type":"application/pdf"}],"article_type":"original","oa_version":"Submitted Version","oa":1,"has_accepted_license":"1","article_number":"16074","year":"2016","publication_identifier":{"issn":["2058-7546"]},"volume":1,"publisher":"Springer Nature","intvolume":"         1","publication_status":"published","publication":"Nature Energy","day":"23","language":[{"iso":"eng"}],"date_updated":"2021-01-12T08:12:51Z","quality_controlled":"1","_id":"7297","month":"05","doi":"10.1038/nenergy.2016.74","issue":"6","ddc":["540","541","547","546"],"article_processing_charge":"No","type":"journal_article","status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2016-05-23T00:00:00Z"},{"year":"2016","date_published":"2016-02-29T00:00:00Z","status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","type":"journal_article","article_processing_charge":"No","issue":"2","doi":"10.1016/j.jpowsour.2015.12.047","month":"02","oa_version":"None","_id":"7298","quality_controlled":"1","date_updated":"2021-01-12T08:12:51Z","article_type":"original","language":[{"iso":"eng"}],"extern":"1","day":"29","publication":"Journal of Power Sources","citation":{"chicago":"Plaimer, Martin, Christoph Breitfuß, Wolfgang Sinz, Simon F. Heindl, Christian Ellersdorfer, Hermann Steffan, Martin Wilkening, et al. “Evaluating the Trade-off between Mechanical and Electrochemical Performance of Separators for Lithium-Ion Batteries: Methodology and Application.” <i>Journal of Power Sources</i>. Elsevier, 2016. <a href=\"https://doi.org/10.1016/j.jpowsour.2015.12.047\">https://doi.org/10.1016/j.jpowsour.2015.12.047</a>.","ama":"Plaimer M, Breitfuß C, Sinz W, et al. Evaluating the trade-off between mechanical and electrochemical performance of separators for lithium-ion batteries: Methodology and application. <i>Journal of Power Sources</i>. 2016;306(2):702-710. doi:<a href=\"https://doi.org/10.1016/j.jpowsour.2015.12.047\">10.1016/j.jpowsour.2015.12.047</a>","ista":"Plaimer M, Breitfuß C, Sinz W, Heindl SF, Ellersdorfer C, Steffan H, Wilkening M, Hennige V, Tatschl R, Geier A, Schramm C, Freunberger SA. 2016. Evaluating the trade-off between mechanical and electrochemical performance of separators for lithium-ion batteries: Methodology and application. Journal of Power Sources. 306(2), 702–710.","short":"M. Plaimer, C. Breitfuß, W. Sinz, S.F. Heindl, C. Ellersdorfer, H. Steffan, M. Wilkening, V. Hennige, R. Tatschl, A. Geier, C. Schramm, S.A. Freunberger, Journal of Power Sources 306 (2016) 702–710.","mla":"Plaimer, Martin, et al. “Evaluating the Trade-off between Mechanical and Electrochemical Performance of Separators for Lithium-Ion Batteries: Methodology and Application.” <i>Journal of Power Sources</i>, vol. 306, no. 2, Elsevier, 2016, pp. 702–10, doi:<a href=\"https://doi.org/10.1016/j.jpowsour.2015.12.047\">10.1016/j.jpowsour.2015.12.047</a>.","apa":"Plaimer, M., Breitfuß, C., Sinz, W., Heindl, S. F., Ellersdorfer, C., Steffan, H., … Freunberger, S. A. (2016). Evaluating the trade-off between mechanical and electrochemical performance of separators for lithium-ion batteries: Methodology and application. <i>Journal of Power Sources</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jpowsour.2015.12.047\">https://doi.org/10.1016/j.jpowsour.2015.12.047</a>","ieee":"M. Plaimer <i>et al.</i>, “Evaluating the trade-off between mechanical and electrochemical performance of separators for lithium-ion batteries: Methodology and application,” <i>Journal of Power Sources</i>, vol. 306, no. 2. Elsevier, pp. 702–710, 2016."},"author":[{"last_name":"Plaimer","full_name":"Plaimer, Martin","first_name":"Martin"},{"full_name":"Breitfuß, Christoph","last_name":"Breitfuß","first_name":"Christoph"},{"full_name":"Sinz, Wolfgang","last_name":"Sinz","first_name":"Wolfgang"},{"full_name":"Heindl, Simon F.","last_name":"Heindl","first_name":"Simon F."},{"last_name":"Ellersdorfer","full_name":"Ellersdorfer, Christian","first_name":"Christian"},{"full_name":"Steffan, Hermann","last_name":"Steffan","first_name":"Hermann"},{"first_name":"Martin","full_name":"Wilkening, Martin","last_name":"Wilkening"},{"first_name":"Volker","full_name":"Hennige, Volker","last_name":"Hennige"},{"first_name":"Reinhard","full_name":"Tatschl, Reinhard","last_name":"Tatschl"},{"full_name":"Geier, Alexander","last_name":"Geier","first_name":"Alexander"},{"first_name":"Christian","last_name":"Schramm","full_name":"Schramm, Christian"},{"last_name":"Freunberger","full_name":"Freunberger, Stefan Alexander","first_name":"Stefan Alexander","id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","orcid":"0000-0003-2902-5319"}],"publication_status":"published","title":"Evaluating the trade-off between mechanical and electrochemical performance of separators for lithium-ion batteries: Methodology and application","publisher":"Elsevier","intvolume":"       306","page":"702-710","publication_identifier":{"issn":["0378-7753"]},"volume":306,"abstract":[{"text":"Lithium-ion batteries are in widespread use in electric vehicles and hybrid vehicles. Besides features like energy density, cost, lifetime, and recyclability the safety of a battery system is of prime importance. The separator material impacts all these properties and requires therefore an informed selection. The interplay between the mechanical and electrochemical properties as key selection criteria is investigated. Mechanical properties were investigated using tensile and puncture penetration tests at abuse relevant conditions. To investigate the electrochemical performance in terms of effective conductivity a method based on impedance spectroscopy was introduced. This methodology is applied to evaluate ten commercial separators which allows for a trade-off analysis of mechanical versus electrochemical performance. Based on the results, and in combination with other factors, this offers an effective approach to select suitable separators for automotive applications.","lang":"eng"}],"date_created":"2020-01-15T12:16:51Z"},{"date_updated":"2021-01-12T08:14:25Z","quality_controlled":"1","_id":"7599","issue":"8","ddc":["580"],"month":"08","doi":"10.1371/journal.pgen.1006252","article_processing_charge":"No","date_published":"2016-08-16T00:00:00Z","type":"journal_article","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","volume":12,"publication_identifier":{"issn":["1553-7404"]},"intvolume":"        12","publisher":"Public Library of Science","publication":"PLOS Genetics","publication_status":"published","language":[{"iso":"eng"}],"day":"16","oa_version":"Published Version","oa":1,"has_accepted_license":"1","year":"2016","article_number":"e1006252","date_created":"2020-03-21T16:08:33Z","abstract":[{"text":"Normal leaf margin development is important for leaf morphogenesis and contributes to diverse leaf shapes in higher plants. We here show the crucial roles of an atypical type II phosphatidylinositol 4-kinase, PI4Kγ5, in Arabidopsis leaf margin development. PI4Kγ5 presents a dynamics expression pattern along with leaf development and a T-DNA mutant lacking PI4Kγ5, pi4kγ5–1, presents serrated leaves, which is resulted from the accelerated cell division and increased auxin concentration at serration tips. Studies revealed that PI4Kγ5 interacts with and phosphorylates a membrane-bound NAC transcription factor, ANAC078. Previous studies demonstrated that membrane-bound transcription factors regulate gene transcription by undergoing proteolytic process to translocate into nucleus, and ANAC078 undergoes proteolysis by cleaving off the transmembrane region and carboxyl terminal. Western blot analysis indeed showed that ANAC078 deleting of carboxyl terminal is significantly reduced in pi4kγ5–1, indicating that PI4Kγ5 is important for the cleavage of ANAC078. This is consistent with the subcellular localization observation showing that fluorescence by GFP-ANAC078 is detected at plasma membrane but not nucleus in pi4kγ5–1 mutant and that expression of ANAC078 deleting of carboxyl terminal, driven by PI4Kγ5 promoter, could rescue the leaf serration defects of pi4kγ5–1. Further analysis showed that ANAC078 suppresses the auxin synthesis by directly binding and regulating the expression of auxin synthesis-related genes. These results indicate that PI4Kγ5 interacts with ANAC078 to negatively regulate auxin synthesis and hence influences cell proliferation and leaf development, providing informative clues for the regulation of in situ auxin synthesis and cell division, as well as the cleavage and functional mechanism of membrane-bound transcription factors.","lang":"eng"}],"file_date_updated":"2020-07-14T12:48:01Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"author":[{"full_name":"Tang, Yong","last_name":"Tang","first_name":"Yong"},{"full_name":"Zhao, Chun-Yan","last_name":"Zhao","first_name":"Chun-Yan"},{"last_name":"Tan","full_name":"Tan, Shutang","id":"2DE75584-F248-11E8-B48F-1D18A9856A87","first_name":"Shutang","orcid":"0000-0002-0471-8285"},{"first_name":"Hong-Wei","full_name":"Xue, Hong-Wei","last_name":"Xue"}],"citation":{"apa":"Tang, Y., Zhao, C.-Y., Tan, S., &#38; Xue, H.-W. (2016). Arabidopsis type II phosphatidylinositol 4-kinase PI4Kγ5 regulates auxin biosynthesis and leaf margin development through interacting with membrane-bound transcription factor ANAC078. <i>PLOS Genetics</i>. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pgen.1006252\">https://doi.org/10.1371/journal.pgen.1006252</a>","ieee":"Y. Tang, C.-Y. Zhao, S. Tan, and H.-W. Xue, “Arabidopsis type II phosphatidylinositol 4-kinase PI4Kγ5 regulates auxin biosynthesis and leaf margin development through interacting with membrane-bound transcription factor ANAC078,” <i>PLOS Genetics</i>, vol. 12, no. 8. Public Library of Science, 2016.","short":"Y. Tang, C.-Y. Zhao, S. Tan, H.-W. Xue, PLOS Genetics 12 (2016).","ista":"Tang Y, Zhao C-Y, Tan S, Xue H-W. 2016. Arabidopsis type II phosphatidylinositol 4-kinase PI4Kγ5 regulates auxin biosynthesis and leaf margin development through interacting with membrane-bound transcription factor ANAC078. PLOS Genetics. 12(8), e1006252.","chicago":"Tang, Yong, Chun-Yan Zhao, Shutang Tan, and Hong-Wei Xue. “Arabidopsis Type II Phosphatidylinositol 4-Kinase PI4Kγ5 Regulates Auxin Biosynthesis and Leaf Margin Development through Interacting with Membrane-Bound Transcription Factor ANAC078.” <i>PLOS Genetics</i>. Public Library of Science, 2016. <a href=\"https://doi.org/10.1371/journal.pgen.1006252\">https://doi.org/10.1371/journal.pgen.1006252</a>.","ama":"Tang Y, Zhao C-Y, Tan S, Xue H-W. Arabidopsis type II phosphatidylinositol 4-kinase PI4Kγ5 regulates auxin biosynthesis and leaf margin development through interacting with membrane-bound transcription factor ANAC078. <i>PLOS Genetics</i>. 2016;12(8). doi:<a href=\"https://doi.org/10.1371/journal.pgen.1006252\">10.1371/journal.pgen.1006252</a>","mla":"Tang, Yong, et al. “Arabidopsis Type II Phosphatidylinositol 4-Kinase PI4Kγ5 Regulates Auxin Biosynthesis and Leaf Margin Development through Interacting with Membrane-Bound Transcription Factor ANAC078.” <i>PLOS Genetics</i>, vol. 12, no. 8, e1006252, Public Library of Science, 2016, doi:<a href=\"https://doi.org/10.1371/journal.pgen.1006252\">10.1371/journal.pgen.1006252</a>."},"title":"Arabidopsis type II phosphatidylinositol 4-kinase PI4Kγ5 regulates auxin biosynthesis and leaf margin development through interacting with membrane-bound transcription factor ANAC078","file":[{"file_name":"2016_PlosGenetics_Tang.PDF","file_size":3266119,"access_level":"open_access","checksum":"ff0ab9a6bed11cda800a6e59820866a0","date_created":"2020-03-23T12:15:31Z","date_updated":"2020-07-14T12:48:01Z","relation":"main_file","creator":"dernst","file_id":"7612","content_type":"application/pdf"}],"article_type":"original","extern":"1"},{"related_material":{"record":[{"id":"1158","status":"public","relation":"used_in_publication"}]},"date_created":"2021-08-10T08:20:17Z","publisher":"Public Library of Science","department":[{"_id":"BeVi"},{"_id":"NiBa"}],"title":"Simulation study to test the robustness of ABC in face of recent times of divergence","citation":{"short":"C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, (2016).","ista":"Roux C, Fraisse C, Romiguier J, Anciaux Y, Galtier N, Bierne N. 2016. Simulation study to test the robustness of ABC in face of recent times of divergence, Public Library of Science, <a href=\"https://doi.org/10.1371/journal.pbio.2000234.s016\">10.1371/journal.pbio.2000234.s016</a>.","ama":"Roux C, Fraisse C, Romiguier J, Anciaux Y, Galtier N, Bierne N. Simulation study to test the robustness of ABC in face of recent times of divergence. 2016. doi:<a href=\"https://doi.org/10.1371/journal.pbio.2000234.s016\">10.1371/journal.pbio.2000234.s016</a>","chicago":"Roux, Camille, Christelle Fraisse, Jonathan Romiguier, Youann Anciaux, Nicolas Galtier, and Nicolas Bierne. “Simulation Study to Test the Robustness of ABC in Face of Recent Times of Divergence.” Public Library of Science, 2016. <a href=\"https://doi.org/10.1371/journal.pbio.2000234.s016\">https://doi.org/10.1371/journal.pbio.2000234.s016</a>.","mla":"Roux, Camille, et al. <i>Simulation Study to Test the Robustness of ABC in Face of Recent Times of Divergence</i>. Public Library of Science, 2016, doi:<a href=\"https://doi.org/10.1371/journal.pbio.2000234.s016\">10.1371/journal.pbio.2000234.s016</a>.","apa":"Roux, C., Fraisse, C., Romiguier, J., Anciaux, Y., Galtier, N., &#38; Bierne, N. (2016). Simulation study to test the robustness of ABC in face of recent times of divergence. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pbio.2000234.s016\">https://doi.org/10.1371/journal.pbio.2000234.s016</a>","ieee":"C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, and N. Bierne, “Simulation study to test the robustness of ABC in face of recent times of divergence.” Public Library of Science, 2016."},"author":[{"last_name":"Roux","full_name":"Roux, Camille","first_name":"Camille"},{"orcid":"0000-0001-8441-5075","first_name":"Christelle","id":"32DF5794-F248-11E8-B48F-1D18A9856A87","full_name":"Fraisse, Christelle","last_name":"Fraisse"},{"first_name":"Jonathan","full_name":"Romiguier, Jonathan","last_name":"Romiguier"},{"full_name":"Anciaux, Youann","last_name":"Anciaux","first_name":"Youann"},{"first_name":"Nicolas","last_name":"Galtier","full_name":"Galtier, Nicolas"},{"full_name":"Bierne, Nicolas","last_name":"Bierne","first_name":"Nicolas"}],"day":"27","date_updated":"2025-09-22T09:55:08Z","_id":"9862","oa_version":"Published Version","month":"12","doi":"10.1371/journal.pbio.2000234.s016","article_processing_charge":"No","type":"research_data_reference","status":"public","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","year":"2016"},{"date_created":"2021-08-10T08:22:52Z","related_material":{"record":[{"status":"public","id":"1158","relation":"used_in_publication"}]},"department":[{"_id":"BeVi"},{"_id":"NiBa"}],"publisher":"Public Library of Science","author":[{"first_name":"Camille","last_name":"Roux","full_name":"Roux, Camille"},{"last_name":"Fraisse","full_name":"Fraisse, Christelle","id":"32DF5794-F248-11E8-B48F-1D18A9856A87","first_name":"Christelle","orcid":"0000-0001-8441-5075"},{"first_name":"Jonathan","full_name":"Romiguier, Jonathan","last_name":"Romiguier"},{"full_name":"Anciaux, Youann","last_name":"Anciaux","first_name":"Youann"},{"first_name":"Nicolas","full_name":"Galtier, Nicolas","last_name":"Galtier"},{"first_name":"Nicolas","last_name":"Bierne","full_name":"Bierne, Nicolas"}],"citation":{"ieee":"C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, and N. Bierne, “Accessions of surveyed individuals, geographic locations and summary statistics.” Public Library of Science, 2016.","apa":"Roux, C., Fraisse, C., Romiguier, J., Anciaux, Y., Galtier, N., &#38; Bierne, N. (2016). Accessions of surveyed individuals, geographic locations and summary statistics. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pbio.2000234.s017\">https://doi.org/10.1371/journal.pbio.2000234.s017</a>","mla":"Roux, Camille, et al. <i>Accessions of Surveyed Individuals, Geographic Locations and Summary Statistics</i>. Public Library of Science, 2016, doi:<a href=\"https://doi.org/10.1371/journal.pbio.2000234.s017\">10.1371/journal.pbio.2000234.s017</a>.","short":"C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, (2016).","ista":"Roux C, Fraisse C, Romiguier J, Anciaux Y, Galtier N, Bierne N. 2016. Accessions of surveyed individuals, geographic locations and summary statistics, Public Library of Science, <a href=\"https://doi.org/10.1371/journal.pbio.2000234.s017\">10.1371/journal.pbio.2000234.s017</a>.","ama":"Roux C, Fraisse C, Romiguier J, Anciaux Y, Galtier N, Bierne N. Accessions of surveyed individuals, geographic locations and summary statistics. 2016. doi:<a href=\"https://doi.org/10.1371/journal.pbio.2000234.s017\">10.1371/journal.pbio.2000234.s017</a>","chicago":"Roux, Camille, Christelle Fraisse, Jonathan Romiguier, Youann Anciaux, Nicolas Galtier, and Nicolas Bierne. “Accessions of Surveyed Individuals, Geographic Locations and Summary Statistics.” Public Library of Science, 2016. <a href=\"https://doi.org/10.1371/journal.pbio.2000234.s017\">https://doi.org/10.1371/journal.pbio.2000234.s017</a>."},"title":"Accessions of surveyed individuals, geographic locations and summary statistics","day":"27","oa_version":"Published Version","_id":"9863","date_updated":"2025-09-22T09:55:09Z","doi":"10.1371/journal.pbio.2000234.s017","month":"12","article_processing_charge":"No","year":"2016","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","status":"public","type":"research_data_reference"},{"date_created":"2021-08-10T08:29:47Z","abstract":[{"text":"Viral capsids are structurally constrained by interactions among the amino acids (AAs) of their constituent proteins. Therefore, epistasis is expected to evolve among physically interacting sites and to influence the rates of substitution. To study the evolution of epistasis, we focused on the major structural protein of the ϕX174 phage family by, first, reconstructing the ancestral protein sequences of 18 species using a Bayesian statistical framework. The inferred ancestral reconstruction differed at eight AAs, for a total of 256 possible ancestral haplotypes. For each ancestral haplotype and the extant species, we estimated, in silico, the distribution of free energies and epistasis of the capsid structure. We found that free energy has not significantly increased but epistasis has. We decomposed epistasis up to fifth order and found that higher-order epistasis sometimes compensates pairwise interactions making the free energy seem additive. The dN/dS ratio is low, suggesting strong purifying selection, and that structure is under stabilizing selection. We synthesized phages carrying ancestral haplotypes of the coat protein gene and measured their fitness experimentally. Our findings indicate that stabilizing mutations can have higher fitness, and that fitness optima do not necessarily coincide with energy minima.","lang":"eng"}],"related_material":{"record":[{"id":"1077","status":"public","relation":"used_in_publication"}]},"department":[{"_id":"NiBa"},{"_id":"JoBo"}],"publisher":"The Royal Society","author":[{"full_name":"Fernandes Redondo, Rodrigo A","last_name":"Fernandes Redondo","orcid":"0000-0002-5837-2793","first_name":"Rodrigo A","id":"409D5C96-F248-11E8-B48F-1D18A9856A87"},{"orcid":"0000-0002-5985-7653","first_name":"Harold","id":"2A181218-F248-11E8-B48F-1D18A9856A87","full_name":"de Vladar, Harold","last_name":"de Vladar"},{"first_name":"Tomasz","full_name":"Włodarski, Tomasz","last_name":"Włodarski"},{"full_name":"Bollback, Jonathan P","last_name":"Bollback","orcid":"0000-0002-4624-4612","first_name":"Jonathan P","id":"2C6FA9CC-F248-11E8-B48F-1D18A9856A87"}],"citation":{"ieee":"R. A. Fernandes Redondo, H. de Vladar, T. Włodarski, and J. P. Bollback, “Data from evolutionary interplay between structure, energy and epistasis in the coat protein of the ϕX174 phage family.” The Royal Society, 2016.","apa":"Fernandes Redondo, R. A., de Vladar, H., Włodarski, T., &#38; Bollback, J. P. (2016). Data from evolutionary interplay between structure, energy and epistasis in the coat protein of the ϕX174 phage family. The Royal Society. <a href=\"https://doi.org/10.6084/m9.figshare.4315652.v1\">https://doi.org/10.6084/m9.figshare.4315652.v1</a>","mla":"Fernandes Redondo, Rodrigo A., et al. <i>Data from Evolutionary Interplay between Structure, Energy and Epistasis in the Coat Protein of the ΦX174 Phage Family</i>. The Royal Society, 2016, doi:<a href=\"https://doi.org/10.6084/m9.figshare.4315652.v1\">10.6084/m9.figshare.4315652.v1</a>.","ista":"Fernandes Redondo RA, de Vladar H, Włodarski T, Bollback JP. 2016. Data from evolutionary interplay between structure, energy and epistasis in the coat protein of the ϕX174 phage family, The Royal Society, <a href=\"https://doi.org/10.6084/m9.figshare.4315652.v1\">10.6084/m9.figshare.4315652.v1</a>.","short":"R.A. Fernandes Redondo, H. de Vladar, T. Włodarski, J.P. Bollback, (2016).","ama":"Fernandes Redondo RA, de Vladar H, Włodarski T, Bollback JP. Data from evolutionary interplay between structure, energy and epistasis in the coat protein of the ϕX174 phage family. 2016. doi:<a href=\"https://doi.org/10.6084/m9.figshare.4315652.v1\">10.6084/m9.figshare.4315652.v1</a>","chicago":"Fernandes Redondo, Rodrigo A, Harold de Vladar, Tomasz Włodarski, and Jonathan P Bollback. “Data from Evolutionary Interplay between Structure, Energy and Epistasis in the Coat Protein of the ΦX174 Phage Family.” The Royal Society, 2016. <a href=\"https://doi.org/10.6084/m9.figshare.4315652.v1\">https://doi.org/10.6084/m9.figshare.4315652.v1</a>."},"title":"Data from evolutionary interplay between structure, energy and epistasis in the coat protein of the ϕX174 phage family","day":"14","oa_version":"Published Version","date_updated":"2025-07-10T11:49:59Z","_id":"9864","oa":1,"doi":"10.6084/m9.figshare.4315652.v1","month":"12","article_processing_charge":"No","date_published":"2016-12-14T00:00:00Z","year":"2016","type":"research_data_reference","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","main_file_link":[{"open_access":"1","url":"https://doi.org/10.6084/m9.figshare.4315652.v1"}],"status":"public"},{"title":"ZIP-archived directory containing all data and computer programs","citation":{"apa":"Zagórski, M. P., Burda, Z., &#38; Wacław, B. (2016). ZIP-archived directory containing all data and computer programs. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pcbi.1005218.s009\">https://doi.org/10.1371/journal.pcbi.1005218.s009</a>","ieee":"M. P. Zagórski, Z. Burda, and B. Wacław, “ZIP-archived directory containing all data and computer programs.” Public Library of Science, 2016.","ama":"Zagórski MP, Burda Z, Wacław B. ZIP-archived directory containing all data and computer programs. 2016. doi:<a href=\"https://doi.org/10.1371/journal.pcbi.1005218.s009\">10.1371/journal.pcbi.1005218.s009</a>","chicago":"Zagórski, Marcin P, Zdzisław Burda, and Bartłomiej Wacław. “ZIP-Archived Directory Containing All Data and Computer Programs.” Public Library of Science, 2016. <a href=\"https://doi.org/10.1371/journal.pcbi.1005218.s009\">https://doi.org/10.1371/journal.pcbi.1005218.s009</a>.","short":"M.P. Zagórski, Z. Burda, B. Wacław, (2016).","ista":"Zagórski MP, Burda Z, Wacław B. 2016. ZIP-archived directory containing all data and computer programs, Public Library of Science, <a href=\"https://doi.org/10.1371/journal.pcbi.1005218.s009\">10.1371/journal.pcbi.1005218.s009</a>.","mla":"Zagórski, Marcin P., et al. <i>ZIP-Archived Directory Containing All Data and Computer Programs</i>. Public Library of Science, 2016, doi:<a href=\"https://doi.org/10.1371/journal.pcbi.1005218.s009\">10.1371/journal.pcbi.1005218.s009</a>."},"author":[{"full_name":"Zagórski, Marcin P","last_name":"Zagórski","orcid":"0000-0001-7896-7762","first_name":"Marcin P","id":"343DA0DC-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Zdzisław","last_name":"Burda","full_name":"Burda, Zdzisław"},{"last_name":"Wacław","full_name":"Wacław, Bartłomiej","first_name":"Bartłomiej"}],"day":"09","related_material":{"record":[{"id":"1167","status":"public","relation":"used_in_publication"}]},"date_created":"2021-08-10T08:37:20Z","publisher":"Public Library of Science","department":[{"_id":"AnKi"}],"article_processing_charge":"No","type":"research_data_reference","status":"public","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","year":"2016","date_published":"2016-12-09T00:00:00Z","date_updated":"2025-09-22T09:53:16Z","_id":"9866","oa_version":"Published Version","month":"12","doi":"10.1371/journal.pcbi.1005218.s009"},{"year":"2016","type":"research_data_reference","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","status":"public","article_processing_charge":"No","doi":"10.1371/journal.pone.0163867.s008","month":"10","oa_version":"Published Version","date_updated":"2025-09-22T08:27:00Z","_id":"9867","day":"04","citation":{"ieee":"C. Hilbe, K. Hagel, and M. Milinski, “Experimental game instructions.” Public Library of Science, 2016.","apa":"Hilbe, C., Hagel, K., &#38; Milinski, M. (2016). Experimental game instructions. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pone.0163867.s008\">https://doi.org/10.1371/journal.pone.0163867.s008</a>","mla":"Hilbe, Christian, et al. <i>Experimental Game Instructions</i>. Public Library of Science, 2016, doi:<a href=\"https://doi.org/10.1371/journal.pone.0163867.s008\">10.1371/journal.pone.0163867.s008</a>.","ista":"Hilbe C, Hagel K, Milinski M. 2016. Experimental game instructions, Public Library of Science, <a href=\"https://doi.org/10.1371/journal.pone.0163867.s008\">10.1371/journal.pone.0163867.s008</a>.","short":"C. Hilbe, K. Hagel, M. Milinski, (2016).","ama":"Hilbe C, Hagel K, Milinski M. Experimental game instructions. 2016. doi:<a href=\"https://doi.org/10.1371/journal.pone.0163867.s008\">10.1371/journal.pone.0163867.s008</a>","chicago":"Hilbe, Christian, Kristin Hagel, and Manfred Milinski. “Experimental Game Instructions.” Public Library of Science, 2016. <a href=\"https://doi.org/10.1371/journal.pone.0163867.s008\">https://doi.org/10.1371/journal.pone.0163867.s008</a>."},"author":[{"orcid":"0000-0001-5116-955X","first_name":"Christian","id":"2FDF8F3C-F248-11E8-B48F-1D18A9856A87","full_name":"Hilbe, Christian","last_name":"Hilbe"},{"first_name":"Kristin","last_name":"Hagel","full_name":"Hagel, Kristin"},{"first_name":"Manfred","full_name":"Milinski, Manfred","last_name":"Milinski"}],"title":"Experimental game instructions","department":[{"_id":"KrCh"}],"publisher":"Public Library of Science","date_created":"2021-08-10T08:42:00Z","abstract":[{"lang":"eng","text":"In the beginning of our experiment, subjects were asked to read a few pages on their computer screens that would explain the rules of the subsequent game. Here, we provide these instructions, translated from German."}],"related_material":{"record":[{"status":"public","id":"1322","relation":"used_in_publication"}]}},{"month":"10","doi":"10.1371/journal.pone.0163867.s009","oa_version":"Published Version","date_updated":"2025-09-22T08:27:00Z","_id":"9868","year":"2016","date_published":"2016-10-04T00:00:00Z","type":"research_data_reference","status":"public","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","article_processing_charge":"No","department":[{"_id":"KrCh"}],"publisher":"Public Library of Science","date_created":"2021-08-10T08:45:00Z","abstract":[{"text":"The raw data file containing the experimental decisions of all our study subjects.","lang":"eng"}],"related_material":{"record":[{"status":"public","id":"1322","relation":"used_in_publication"}]},"day":"04","citation":{"ama":"Hilbe C, Hagel K, Milinski M. Experimental data. 2016. doi:<a href=\"https://doi.org/10.1371/journal.pone.0163867.s009\">10.1371/journal.pone.0163867.s009</a>","chicago":"Hilbe, Christian, Kristin Hagel, and Manfred Milinski. “Experimental Data.” Public Library of Science, 2016. <a href=\"https://doi.org/10.1371/journal.pone.0163867.s009\">https://doi.org/10.1371/journal.pone.0163867.s009</a>.","ista":"Hilbe C, Hagel K, Milinski M. 2016. Experimental data, Public Library of Science, <a href=\"https://doi.org/10.1371/journal.pone.0163867.s009\">10.1371/journal.pone.0163867.s009</a>.","short":"C. Hilbe, K. Hagel, M. Milinski, (2016).","mla":"Hilbe, Christian, et al. <i>Experimental Data</i>. Public Library of Science, 2016, doi:<a href=\"https://doi.org/10.1371/journal.pone.0163867.s009\">10.1371/journal.pone.0163867.s009</a>.","apa":"Hilbe, C., Hagel, K., &#38; Milinski, M. (2016). Experimental data. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pone.0163867.s009\">https://doi.org/10.1371/journal.pone.0163867.s009</a>","ieee":"C. Hilbe, K. Hagel, and M. Milinski, “Experimental data.” Public Library of Science, 2016."},"author":[{"last_name":"Hilbe","full_name":"Hilbe, Christian","id":"2FDF8F3C-F248-11E8-B48F-1D18A9856A87","first_name":"Christian","orcid":"0000-0001-5116-955X"},{"full_name":"Hagel, Kristin","last_name":"Hagel","first_name":"Kristin"},{"first_name":"Manfred","last_name":"Milinski","full_name":"Milinski, Manfred"}],"title":"Experimental data"},{"article_processing_charge":"No","date_published":"2016-09-27T00:00:00Z","year":"2016","type":"research_data_reference","status":"public","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","oa_version":"Published Version","date_updated":"2025-09-22T08:46:14Z","_id":"9869","doi":"10.1371/journal.pone.0163628.s001","month":"09","citation":{"mla":"Hillenbrand, Patrick, et al. <i>Error Bound on an Estimator of Position</i>. Public Library of Science, 2016, doi:<a href=\"https://doi.org/10.1371/journal.pone.0163628.s001\">10.1371/journal.pone.0163628.s001</a>.","short":"P. Hillenbrand, U. Gerland, G. Tkačik, (2016).","ista":"Hillenbrand P, Gerland U, Tkačik G. 2016. Error bound on an estimator of position, Public Library of Science, <a href=\"https://doi.org/10.1371/journal.pone.0163628.s001\">10.1371/journal.pone.0163628.s001</a>.","chicago":"Hillenbrand, Patrick, Ulrich Gerland, and Gašper Tkačik. “Error Bound on an Estimator of Position.” Public Library of Science, 2016. <a href=\"https://doi.org/10.1371/journal.pone.0163628.s001\">https://doi.org/10.1371/journal.pone.0163628.s001</a>.","ama":"Hillenbrand P, Gerland U, Tkačik G. Error bound on an estimator of position. 2016. doi:<a href=\"https://doi.org/10.1371/journal.pone.0163628.s001\">10.1371/journal.pone.0163628.s001</a>","ieee":"P. Hillenbrand, U. Gerland, and G. Tkačik, “Error bound on an estimator of position.” Public Library of Science, 2016.","apa":"Hillenbrand, P., Gerland, U., &#38; Tkačik, G. (2016). Error bound on an estimator of position. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pone.0163628.s001\">https://doi.org/10.1371/journal.pone.0163628.s001</a>"},"author":[{"last_name":"Hillenbrand","full_name":"Hillenbrand, Patrick","first_name":"Patrick"},{"full_name":"Gerland, Ulrich","last_name":"Gerland","first_name":"Ulrich"},{"full_name":"Tkačik, Gašper","last_name":"Tkačik","orcid":"0000-0002-6699-1455","id":"3D494DCA-F248-11E8-B48F-1D18A9856A87","first_name":"Gašper"}],"title":"Error bound on an estimator of position","day":"27","date_created":"2021-08-10T08:53:48Z","abstract":[{"text":"A lower bound on the error of a positional estimator with limited positional information is derived.","lang":"eng"}],"related_material":{"record":[{"id":"1270","status":"public","relation":"used_in_publication"}]},"department":[{"_id":"GaTk"}],"publisher":"Public Library of Science"},{"day":"27","author":[{"first_name":"Patrick","full_name":"Hillenbrand, Patrick","last_name":"Hillenbrand"},{"first_name":"Ulrich","full_name":"Gerland, Ulrich","last_name":"Gerland"},{"last_name":"Tkačik","full_name":"Tkačik, Gašper","id":"3D494DCA-F248-11E8-B48F-1D18A9856A87","first_name":"Gašper","orcid":"0000-0002-6699-1455"}],"citation":{"apa":"Hillenbrand, P., Gerland, U., &#38; Tkačik, G. (2016). Computation of positional information in an Ising model. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pone.0163628.s002\">https://doi.org/10.1371/journal.pone.0163628.s002</a>","ieee":"P. Hillenbrand, U. Gerland, and G. Tkačik, “Computation of positional information in an Ising model.” Public Library of Science, 2016.","short":"P. Hillenbrand, U. Gerland, G. Tkačik, (2016).","ista":"Hillenbrand P, Gerland U, Tkačik G. 2016. Computation of positional information in an Ising model, Public Library of Science, <a href=\"https://doi.org/10.1371/journal.pone.0163628.s002\">10.1371/journal.pone.0163628.s002</a>.","chicago":"Hillenbrand, Patrick, Ulrich Gerland, and Gašper Tkačik. “Computation of Positional Information in an Ising Model.” Public Library of Science, 2016. <a href=\"https://doi.org/10.1371/journal.pone.0163628.s002\">https://doi.org/10.1371/journal.pone.0163628.s002</a>.","ama":"Hillenbrand P, Gerland U, Tkačik G. Computation of positional information in an Ising model. 2016. doi:<a href=\"https://doi.org/10.1371/journal.pone.0163628.s002\">10.1371/journal.pone.0163628.s002</a>","mla":"Hillenbrand, Patrick, et al. <i>Computation of Positional Information in an Ising Model</i>. Public Library of Science, 2016, doi:<a href=\"https://doi.org/10.1371/journal.pone.0163628.s002\">10.1371/journal.pone.0163628.s002</a>."},"title":"Computation of positional information in an Ising model","department":[{"_id":"GaTk"}],"publisher":"Public Library of Science","abstract":[{"lang":"eng","text":"The effect of noise in the input field on an Ising model is approximated. Furthermore, methods to compute positional information in an Ising model by transfer matrices and Monte Carlo sampling are outlined."}],"date_created":"2021-08-10T09:23:45Z","related_material":{"record":[{"relation":"used_in_publication","status":"public","id":"1270"}]},"date_published":"2016-09-27T00:00:00Z","year":"2016","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","status":"public","type":"research_data_reference","article_processing_charge":"No","doi":"10.1371/journal.pone.0163628.s002","month":"09","oa_version":"Published Version","_id":"9870","date_updated":"2025-09-22T08:46:14Z"},{"doi":"10.1371/journal.pone.0163628.s003","month":"09","oa_version":"Published Version","_id":"9871","date_updated":"2025-09-22T08:46:14Z","year":"2016","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","status":"public","type":"research_data_reference","article_processing_charge":"No","department":[{"_id":"GaTk"}],"publisher":"Public Library of Science","abstract":[{"text":"The positional information in a discrete morphogen field with Gaussian noise is computed.","lang":"eng"}],"date_created":"2021-08-10T09:27:35Z","related_material":{"record":[{"relation":"used_in_publication","status":"public","id":"1270"}]},"day":"27","citation":{"short":"P. Hillenbrand, U. Gerland, G. Tkačik, (2016).","ista":"Hillenbrand P, Gerland U, Tkačik G. 2016. Computation of positional information in a discrete morphogen field, Public Library of Science, <a href=\"https://doi.org/10.1371/journal.pone.0163628.s003\">10.1371/journal.pone.0163628.s003</a>.","ama":"Hillenbrand P, Gerland U, Tkačik G. Computation of positional information in a discrete morphogen field. 2016. doi:<a href=\"https://doi.org/10.1371/journal.pone.0163628.s003\">10.1371/journal.pone.0163628.s003</a>","chicago":"Hillenbrand, Patrick, Ulrich Gerland, and Gašper Tkačik. “Computation of Positional Information in a Discrete Morphogen Field.” Public Library of Science, 2016. <a href=\"https://doi.org/10.1371/journal.pone.0163628.s003\">https://doi.org/10.1371/journal.pone.0163628.s003</a>.","mla":"Hillenbrand, Patrick, et al. <i>Computation of Positional Information in a Discrete Morphogen Field</i>. Public Library of Science, 2016, doi:<a href=\"https://doi.org/10.1371/journal.pone.0163628.s003\">10.1371/journal.pone.0163628.s003</a>.","apa":"Hillenbrand, P., Gerland, U., &#38; Tkačik, G. (2016). Computation of positional information in a discrete morphogen field. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pone.0163628.s003\">https://doi.org/10.1371/journal.pone.0163628.s003</a>","ieee":"P. Hillenbrand, U. Gerland, and G. Tkačik, “Computation of positional information in a discrete morphogen field.” Public Library of Science, 2016."},"author":[{"first_name":"Patrick","last_name":"Hillenbrand","full_name":"Hillenbrand, Patrick"},{"first_name":"Ulrich","last_name":"Gerland","full_name":"Gerland, Ulrich"},{"full_name":"Tkačik, Gašper","last_name":"Tkačik","orcid":"0000-0002-6699-1455","first_name":"Gašper","id":"3D494DCA-F248-11E8-B48F-1D18A9856A87"}],"title":"Computation of positional information in a discrete morphogen field"},{"day":"19","title":"Quantification of the growth rate reduction as a consequence of age-specific mortality","author":[{"last_name":"Boehm","full_name":"Boehm, Alex","first_name":"Alex"},{"full_name":"Arnoldini, Markus","last_name":"Arnoldini","first_name":"Markus"},{"last_name":"Bergmiller","full_name":"Bergmiller, Tobias","id":"2C471CFA-F248-11E8-B48F-1D18A9856A87","first_name":"Tobias","orcid":"0000-0001-5396-4346"},{"last_name":"Röösli","full_name":"Röösli, Thomas","first_name":"Thomas"},{"last_name":"Bigosch","full_name":"Bigosch, Colette","first_name":"Colette"},{"first_name":"Martin","full_name":"Ackermann, Martin","last_name":"Ackermann"}],"citation":{"apa":"Boehm, A., Arnoldini, M., Bergmiller, T., Röösli, T., Bigosch, C., &#38; Ackermann, M. (2016). Quantification of the growth rate reduction as a consequence of age-specific mortality. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pgen.1005974.s015\">https://doi.org/10.1371/journal.pgen.1005974.s015</a>","ieee":"A. Boehm, M. Arnoldini, T. Bergmiller, T. Röösli, C. Bigosch, and M. Ackermann, “Quantification of the growth rate reduction as a consequence of age-specific mortality.” Public Library of Science, 2016.","short":"A. Boehm, M. Arnoldini, T. Bergmiller, T. Röösli, C. Bigosch, M. Ackermann, (2016).","ista":"Boehm A, Arnoldini M, Bergmiller T, Röösli T, Bigosch C, Ackermann M. 2016. Quantification of the growth rate reduction as a consequence of age-specific mortality, Public Library of Science, <a href=\"https://doi.org/10.1371/journal.pgen.1005974.s015\">10.1371/journal.pgen.1005974.s015</a>.","chicago":"Boehm, Alex, Markus Arnoldini, Tobias Bergmiller, Thomas Röösli, Colette Bigosch, and Martin Ackermann. “Quantification of the Growth Rate Reduction as a Consequence of Age-Specific Mortality.” Public Library of Science, 2016. <a href=\"https://doi.org/10.1371/journal.pgen.1005974.s015\">https://doi.org/10.1371/journal.pgen.1005974.s015</a>.","ama":"Boehm A, Arnoldini M, Bergmiller T, Röösli T, Bigosch C, Ackermann M. Quantification of the growth rate reduction as a consequence of age-specific mortality. 2016. doi:<a href=\"https://doi.org/10.1371/journal.pgen.1005974.s015\">10.1371/journal.pgen.1005974.s015</a>","mla":"Boehm, Alex, et al. <i>Quantification of the Growth Rate Reduction as a Consequence of Age-Specific Mortality</i>. Public Library of Science, 2016, doi:<a href=\"https://doi.org/10.1371/journal.pgen.1005974.s015\">10.1371/journal.pgen.1005974.s015</a>."},"publisher":"Public Library of Science","department":[{"_id":"CaGu"}],"related_material":{"record":[{"status":"public","id":"1250","relation":"used_in_publication"}]},"date_created":"2021-08-10T09:42:34Z","type":"research_data_reference","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","status":"public","year":"2016","article_processing_charge":"No","doi":"10.1371/journal.pgen.1005974.s015","month":"04","date_updated":"2025-09-22T09:10:03Z","_id":"9873","oa_version":"Published Version"},{"oa_version":"None","_id":"19990","date_updated":"2026-04-07T08:32:03Z","quality_controlled":"1","month":"02","doi":"10.1007/978-1-4939-3064-7_17","article_processing_charge":"No","date_published":"2016-02-02T00:00:00Z","year":"2016","OA_type":"closed access","status":"public","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","type":"book_chapter","publication_identifier":{"issn":["0893-2336"],"eissn":["1940-6045"],"isbn":["9781493930630"],"eisbn":["9781493930647"]},"abstract":[{"lang":"eng","text":"Visualizing molecular localization at high resolution contributes to understanding of their functions and roles in physiological and pathological conditions. Sodium dodecyl sulfate-digested freeze-fracture replica labeling (SDS-FRL) is a powerful electron microscopy method to study high-resolution two-dimensional distribution of transmembrane proteins and their tightly associated proteins on platinum-carbon replica. During treatment with SDS, unfixed proteins and intracellular organelle are dissolved and integral membrane proteins captured and stabilized by carbon and platinum deposition are denatured, retaining most of their antigenicity, and exposed on exoplasmic and protoplasmic surfaces of lipid monolayers. The exposure of these antigens on the surface of replica facilitates the accessibility of antibodies and therefore provides higher labeling efficiency than those obtained with other immunoelectron microscopy techniques. In this chapter, we describe the protocols of SDS-FRL adapted for mammalian brain samples and an additional procedure for fluorescence-guided electron microscopy for replica immunolabeling."}],"date_created":"2025-07-10T13:56:06Z","department":[{"_id":"RySh"}],"series_title":"Neuromethods","acknowledgement":"We thank Mitsuru Ikeda for preparing replica images used in Fig. 2.","page":"233-245","publisher":"Springer Nature","author":[{"last_name":"Harada","full_name":"Harada, Harumi","id":"2E55CDF2-F248-11E8-B48F-1D18A9856A87","first_name":"Harumi","orcid":"0000-0001-7429-7896"},{"full_name":"Shigemoto, Ryuichi","last_name":"Shigemoto","orcid":"0000-0001-8761-9444","id":"499F3ABC-F248-11E8-B48F-1D18A9856A87","first_name":"Ryuichi"}],"citation":{"mla":"Harada, Harumi, and Ryuichi Shigemoto. “High-Resolution Localization of Membrane Proteins by SDS-Digested Freeze-Fracture Replica Labeling (SDS-FRL).” <i>Receptor and Ion Channel Detection in the Brain</i>, Springer Nature, 2016, pp. 233–45, doi:<a href=\"https://doi.org/10.1007/978-1-4939-3064-7_17\">10.1007/978-1-4939-3064-7_17</a>.","ama":"Harada H, Shigemoto R. High-Resolution Localization of Membrane Proteins by SDS-Digested Freeze-Fracture Replica Labeling (SDS-FRL). In: <i>Receptor and Ion Channel Detection in the Brain</i>. Neuromethods. Springer Nature; 2016:233-245. doi:<a href=\"https://doi.org/10.1007/978-1-4939-3064-7_17\">10.1007/978-1-4939-3064-7_17</a>","chicago":"Harada, Harumi, and Ryuichi Shigemoto. “High-Resolution Localization of Membrane Proteins by SDS-Digested Freeze-Fracture Replica Labeling (SDS-FRL).” In <i>Receptor and Ion Channel Detection in the Brain</i>, 233–45. Neuromethods. Springer Nature, 2016. <a href=\"https://doi.org/10.1007/978-1-4939-3064-7_17\">https://doi.org/10.1007/978-1-4939-3064-7_17</a>.","ista":"Harada H, Shigemoto R. 2016.High-Resolution Localization of Membrane Proteins by SDS-Digested Freeze-Fracture Replica Labeling (SDS-FRL). In: Receptor and Ion Channel Detection in the Brain. , 233–245.","short":"H. Harada, R. Shigemoto, in:, Receptor and Ion Channel Detection in the Brain, Springer Nature, 2016, pp. 233–245.","ieee":"H. Harada and R. Shigemoto, “High-Resolution Localization of Membrane Proteins by SDS-Digested Freeze-Fracture Replica Labeling (SDS-FRL),” in <i>Receptor and Ion Channel Detection in the Brain</i>, Springer Nature, 2016, pp. 233–245.","apa":"Harada, H., &#38; Shigemoto, R. (2016). High-Resolution Localization of Membrane Proteins by SDS-Digested Freeze-Fracture Replica Labeling (SDS-FRL). In <i>Receptor and Ion Channel Detection in the Brain</i> (pp. 233–245). Springer Nature. <a href=\"https://doi.org/10.1007/978-1-4939-3064-7_17\">https://doi.org/10.1007/978-1-4939-3064-7_17</a>"},"publication":"Receptor and Ion Channel Detection in the Brain","corr_author":"1","title":"High-Resolution Localization of Membrane Proteins by SDS-Digested Freeze-Fracture Replica Labeling (SDS-FRL)","publication_status":"published","language":[{"iso":"eng"}],"day":"02"},{"ddc":["539"],"issue":"11","doi":"10.1021/acs.nanolett.6b02715","month":"09","_id":"1328","date_updated":"2026-04-08T07:27:13Z","quality_controlled":"1","date_published":"2016-09-22T00:00:00Z","status":"public","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","type":"journal_article","article_processing_charge":"No","isi":1,"ec_funded":1,"intvolume":"        16","publisher":"American Chemical Society","volume":16,"project":[{"_id":"25517E86-B435-11E9-9278-68D0E5697425","name":"Towards Spin qubits and Majorana fermions in Germanium self assembled hut-wires","grant_number":"335497","call_identifier":"FP7"}],"related_material":{"record":[{"id":"7977","relation":"popular_science"},{"id":"7996","status":"public","relation":"dissertation_contains"}]},"language":[{"iso":"eng"}],"day":"22","publication":"Nano Letters","external_id":{"isi":["000387625000025"]},"corr_author":"1","publication_status":"published","oa":1,"oa_version":"Published Version","scopus_import":"1","year":"2016","pubrep_id":"664","publist_id":"5941","has_accepted_license":"1","department":[{"_id":"GeKa"}],"acknowledgement":"The work was supported by the EC FP7 ICT project SiSPIN no. 323841, the EC FP7 ICT project PAMS no. 610446, the ERC Starting Grant no. 335497, the FWF-I-1190-N20 project, and the Swiss NSF. We acknowledge F. Schäffler for fruitful discussions related to the hut wire growth and for giving us access to the molecular beam epitaxy system, M. Schatzl for her support in electron beam lithography, and V. Jadris ̌ko for helping us with the COMSOL simulations. Finally, we thank G. Bauer for his continuous support. ","page":"6879 - 6885","abstract":[{"lang":"eng","text":"Hole spins have gained considerable interest in the past few years due to their potential for fast electrically controlled qubits. Here, we study holes confined in Ge hut wires, a so-far unexplored type of nanostructure. Low-temperature magnetotransport measurements reveal a large anisotropy between the in-plane and out-of-plane g-factors of up to 18. Numerical simulations verify that this large anisotropy originates from a confined wave function of heavy-hole character. A light-hole admixture of less than 1% is estimated for the states of lowest energy, leading to a surprisingly large reduction of the out-of-plane g-factors compared with those for pure heavy holes. Given this tiny light-hole contribution, the spin lifetimes are expected to be very long, even in isotopically nonpurified samples."}],"file_date_updated":"2020-07-14T12:44:44Z","date_created":"2018-12-11T11:51:24Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"file":[{"content_type":"application/pdf","file_id":"5053","creator":"system","file_size":535121,"access_level":"open_access","date_created":"2018-12-12T10:14:04Z","checksum":"b63feece90d7b620ece49ca632e34ff3","relation":"main_file","date_updated":"2020-07-14T12:44:44Z","file_name":"IST-2016-664-v1+1_acs.nanolett.6b02715.pdf"}],"citation":{"mla":"Watzinger, Hannes, et al. “Heavy-Hole States in Germanium Hut Wires.” <i>Nano Letters</i>, vol. 16, no. 11, American Chemical Society, 2016, pp. 6879–85, doi:<a href=\"https://doi.org/10.1021/acs.nanolett.6b02715\">10.1021/acs.nanolett.6b02715</a>.","short":"H. Watzinger, C. Kloeffel, L. Vukušić, M. Rossell, V. Sessi, J. Kukucka, R. Kirchschlager, E. Lausecker, A. Truhlar, M. Glaser, A. Rastelli, A. Fuhrer, D. Loss, G. Katsaros, Nano Letters 16 (2016) 6879–6885.","ista":"Watzinger H, Kloeffel C, Vukušić L, Rossell M, Sessi V, Kukucka J, Kirchschlager R, Lausecker E, Truhlar A, Glaser M, Rastelli A, Fuhrer A, Loss D, Katsaros G. 2016. Heavy-hole states in germanium hut wires. Nano Letters. 16(11), 6879–6885.","chicago":"Watzinger, Hannes, Christoph Kloeffel, Lada Vukušić, Marta Rossell, Violetta Sessi, Josip Kukucka, Raimund Kirchschlager, et al. “Heavy-Hole States in Germanium Hut Wires.” <i>Nano Letters</i>. American Chemical Society, 2016. <a href=\"https://doi.org/10.1021/acs.nanolett.6b02715\">https://doi.org/10.1021/acs.nanolett.6b02715</a>.","ama":"Watzinger H, Kloeffel C, Vukušić L, et al. Heavy-hole states in germanium hut wires. <i>Nano Letters</i>. 2016;16(11):6879-6885. doi:<a href=\"https://doi.org/10.1021/acs.nanolett.6b02715\">10.1021/acs.nanolett.6b02715</a>","ieee":"H. Watzinger <i>et al.</i>, “Heavy-hole states in germanium hut wires,” <i>Nano Letters</i>, vol. 16, no. 11. American Chemical Society, pp. 6879–6885, 2016.","apa":"Watzinger, H., Kloeffel, C., Vukušić, L., Rossell, M., Sessi, V., Kukucka, J., … Katsaros, G. (2016). Heavy-hole states in germanium hut wires. <i>Nano Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acs.nanolett.6b02715\">https://doi.org/10.1021/acs.nanolett.6b02715</a>"},"author":[{"first_name":"Hannes","id":"35DF8E50-F248-11E8-B48F-1D18A9856A87","last_name":"Watzinger","full_name":"Watzinger, Hannes"},{"first_name":"Christoph","last_name":"Kloeffel","full_name":"Kloeffel, Christoph"},{"orcid":"0000-0003-2424-8636","id":"31E9F056-F248-11E8-B48F-1D18A9856A87","first_name":"Lada","full_name":"Vukusic, Lada","last_name":"Vukusic"},{"full_name":"Rossell, Marta","last_name":"Rossell","first_name":"Marta"},{"full_name":"Sessi, Violetta","last_name":"Sessi","first_name":"Violetta"},{"last_name":"Kukucka","full_name":"Kukucka, Josip","id":"3F5D8856-F248-11E8-B48F-1D18A9856A87","first_name":"Josip"},{"last_name":"Kirchschlager","full_name":"Kirchschlager, Raimund","first_name":"Raimund"},{"last_name":"Lausecker","full_name":"Lausecker, Elisabeth","id":"33662F76-F248-11E8-B48F-1D18A9856A87","first_name":"Elisabeth"},{"first_name":"Alisha","id":"49CBC780-F248-11E8-B48F-1D18A9856A87","last_name":"Truhlar","full_name":"Truhlar, Alisha"},{"first_name":"Martin","last_name":"Glaser","full_name":"Glaser, Martin"},{"first_name":"Armando","full_name":"Rastelli, Armando","last_name":"Rastelli"},{"full_name":"Fuhrer, Andreas","last_name":"Fuhrer","first_name":"Andreas"},{"last_name":"Loss","full_name":"Loss, Daniel","first_name":"Daniel"},{"full_name":"Katsaros, Georgios","last_name":"Katsaros","orcid":"0000-0001-8342-202X","first_name":"Georgios","id":"38DB5788-F248-11E8-B48F-1D18A9856A87"}],"title":"Heavy-hole states in germanium hut wires"},{"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"file_date_updated":"2020-07-14T12:44:45Z","abstract":[{"text":"ATP production requires the establishment of an electrochemical proton gradient across the inner mitochondrial membrane. Mitochondrial uncouplers dissipate this proton gradient and disrupt numerous cellular processes, including vesicular trafficking, mainly through energy depletion. Here we show that Endosidin9 (ES9), a novel mitochondrial uncoupler, is a potent inhibitor of clathrin-mediated endocytosis (CME) in different systems and that ES9 induces inhibition of CME not because of its effect on cellular ATP, but rather due to its protonophore activity that leads to cytoplasm acidification. We show that the known tyrosine kinase inhibitor tyrphostinA23, which is routinely used to block CME, displays similar properties, thus questioning its use as a specific inhibitor of cargo recognition by the AP-2 adaptor complex via tyrosine motif-based endocytosis signals. Furthermore, we show that cytoplasm acidification dramatically affects the dynamics and recruitment of clathrin and associated adaptors, and leads to reduction of phosphatidylinositol 4,5-biphosphate from the plasma membrane.","lang":"eng"}],"date_created":"2018-12-11T11:51:30Z","department":[{"_id":"JiFr"}],"acknowledgement":"We thank Yvon Jaillais, Ikuko Hara-Nishimura, Akihiko Nakano, Takashi Ueda and Jinxing Lin for providing materials, Natasha Raikhel, Glenn Hicks, Steffen Vanneste, and Ricardo Tejos for useful suggestions, Patrick Callaerts for providing S2 Drosophila cell cultures, Michael Sixt for providing HeLa cells, Annick Bleys for literature searches, VIB Bio Imaging Core for help with imaging conditions and Martine De Cock for help in preparing the article. This work was supported by the Agency for Innovation by Science\r\nand Technology for a pre-doctoral fellowship to W.D.; the Research fund KU Leuven\r\n(GOA), a Methusalem grant of the Flemish government and VIB to S.K., J.K. and P.V.;\r\nby the Netherlands Organisation for Scientific Research (NWO) for ALW grants\r\n846.11.002 (C.T.) and 867.15.020 (T.M.); the European Research Council (project\r\nERC-2011-StG-20101109 PSDP) (to J.F.); a European Research Council (ERC) Starting\r\nGrant (grant 260678) (to P.V.), the Research Foundation-Flanders (grants G.0747.09,\r\nG094011 and G095511) (to P.V.), the Hercules Foundation, an Interuniversity Attraction\r\nPoles Poles Program, initiated by the Belgian State, Science Policy Office (to P.V.),\r\nthe Swedish VetenskapsRådet grant to O.K., the Ghent University ‘Bijzonder\r\nOnderzoek Fonds’ (BOF) for a predoctoral fellowship to F.A.O.-M., the Research\r\nFoundation-Flanders (FWO) to K.M. and E.R.","title":"Mitochondrial uncouplers inhibit clathrin-mediated endocytosis largely through cytoplasmic acidification","author":[{"last_name":"Dejonghe","full_name":"Dejonghe, Wim","first_name":"Wim"},{"full_name":"Kuenen, Sabine","last_name":"Kuenen","first_name":"Sabine"},{"full_name":"Mylle, Evelien","last_name":"Mylle","first_name":"Evelien"},{"first_name":"Mina K","id":"3407EB18-F248-11E8-B48F-1D18A9856A87","last_name":"Vasileva","full_name":"Vasileva, Mina K"},{"full_name":"Keech, Olivier","last_name":"Keech","first_name":"Olivier"},{"last_name":"Viotti","full_name":"Viotti, Corrado","first_name":"Corrado"},{"full_name":"Swerts, Jef","last_name":"Swerts","first_name":"Jef"},{"last_name":"Fendrych","full_name":"Fendrych, Matyas","first_name":"Matyas","id":"43905548-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-9767-8699"},{"full_name":"Ortiz Morea, Fausto","last_name":"Ortiz Morea","first_name":"Fausto"},{"first_name":"Kiril","full_name":"Mishev, Kiril","last_name":"Mishev"},{"first_name":"Simon","full_name":"Delang, Simon","last_name":"Delang"},{"first_name":"Stefan","full_name":"Scholl, Stefan","last_name":"Scholl"},{"first_name":"Xavier","full_name":"Zarza, Xavier","last_name":"Zarza"},{"last_name":"Heilmann","full_name":"Heilmann, Mareike","first_name":"Mareike"},{"first_name":"Jiorgos","full_name":"Kourelis, Jiorgos","last_name":"Kourelis"},{"last_name":"Kasprowicz","full_name":"Kasprowicz, Jaroslaw","first_name":"Jaroslaw"},{"first_name":"Le","last_name":"Nguyen","full_name":"Nguyen, Le"},{"last_name":"Drozdzecki","full_name":"Drozdzecki, Andrzej","first_name":"Andrzej"},{"full_name":"Van Houtte, Isabelle","last_name":"Van Houtte","first_name":"Isabelle"},{"first_name":"Anna","full_name":"Szatmári, Anna","last_name":"Szatmári"},{"last_name":"Majda","full_name":"Majda, Mateusz","first_name":"Mateusz"},{"full_name":"Baisa, Gary","last_name":"Baisa","first_name":"Gary"},{"first_name":"Sebastian","last_name":"Bednarek","full_name":"Bednarek, Sebastian"},{"first_name":"Stéphanie","full_name":"Robert, Stéphanie","last_name":"Robert"},{"last_name":"Audenaert","full_name":"Audenaert, Dominique","first_name":"Dominique"},{"first_name":"Christa","full_name":"Testerink, Christa","last_name":"Testerink"},{"first_name":"Teun","last_name":"Munnik","full_name":"Munnik, Teun"},{"first_name":"Daniël","last_name":"Van Damme","full_name":"Van Damme, Daniël"},{"last_name":"Heilmann","full_name":"Heilmann, Ingo","first_name":"Ingo"},{"last_name":"Schumacher","full_name":"Schumacher, Karin","first_name":"Karin"},{"last_name":"Winne","full_name":"Winne, Johan","first_name":"Johan"},{"orcid":"0000-0002-8302-7596","first_name":"Jirí","id":"4159519E-F248-11E8-B48F-1D18A9856A87","full_name":"Friml, Jirí","last_name":"Friml"},{"first_name":"Patrik","last_name":"Verstreken","full_name":"Verstreken, Patrik"},{"first_name":"Eugenia","full_name":"Russinova, Eugenia","last_name":"Russinova"}],"citation":{"mla":"Dejonghe, Wim, et al. “Mitochondrial Uncouplers Inhibit Clathrin-Mediated Endocytosis Largely through Cytoplasmic Acidification.” <i>Nature Communications</i>, vol. 7, 11710, Nature Publishing Group, 2016, doi:<a href=\"https://doi.org/10.1038/ncomms11710\">10.1038/ncomms11710</a>.","short":"W. Dejonghe, S. Kuenen, E. Mylle, M.K. Vasileva, O. Keech, C. Viotti, J. Swerts, M. Fendrych, F. Ortiz Morea, K. Mishev, S. Delang, S. Scholl, X. Zarza, M. Heilmann, J. Kourelis, J. Kasprowicz, L. Nguyen, A. Drozdzecki, I. Van Houtte, A. Szatmári, M. Majda, G. Baisa, S. Bednarek, S. Robert, D. Audenaert, C. Testerink, T. Munnik, D. Van Damme, I. Heilmann, K. Schumacher, J. Winne, J. Friml, P. Verstreken, E. Russinova, Nature Communications 7 (2016).","ista":"Dejonghe W, Kuenen S, Mylle E, Vasileva MK, Keech O, Viotti C, Swerts J, Fendrych M, Ortiz Morea F, Mishev K, Delang S, Scholl S, Zarza X, Heilmann M, Kourelis J, Kasprowicz J, Nguyen L, Drozdzecki A, Van Houtte I, Szatmári A, Majda M, Baisa G, Bednarek S, Robert S, Audenaert D, Testerink C, Munnik T, Van Damme D, Heilmann I, Schumacher K, Winne J, Friml J, Verstreken P, Russinova E. 2016. Mitochondrial uncouplers inhibit clathrin-mediated endocytosis largely through cytoplasmic acidification. Nature Communications. 7, 11710.","chicago":"Dejonghe, Wim, Sabine Kuenen, Evelien Mylle, Mina K Vasileva, Olivier Keech, Corrado Viotti, Jef Swerts, et al. “Mitochondrial Uncouplers Inhibit Clathrin-Mediated Endocytosis Largely through Cytoplasmic Acidification.” <i>Nature Communications</i>. Nature Publishing Group, 2016. <a href=\"https://doi.org/10.1038/ncomms11710\">https://doi.org/10.1038/ncomms11710</a>.","ama":"Dejonghe W, Kuenen S, Mylle E, et al. Mitochondrial uncouplers inhibit clathrin-mediated endocytosis largely through cytoplasmic acidification. <i>Nature Communications</i>. 2016;7. doi:<a href=\"https://doi.org/10.1038/ncomms11710\">10.1038/ncomms11710</a>","ieee":"W. Dejonghe <i>et al.</i>, “Mitochondrial uncouplers inhibit clathrin-mediated endocytosis largely through cytoplasmic acidification,” <i>Nature Communications</i>, vol. 7. Nature Publishing Group, 2016.","apa":"Dejonghe, W., Kuenen, S., Mylle, E., Vasileva, M. K., Keech, O., Viotti, C., … Russinova, E. (2016). Mitochondrial uncouplers inhibit clathrin-mediated endocytosis largely through cytoplasmic acidification. <i>Nature Communications</i>. Nature Publishing Group. <a href=\"https://doi.org/10.1038/ncomms11710\">https://doi.org/10.1038/ncomms11710</a>"},"file":[{"date_updated":"2020-07-14T12:44:45Z","relation":"main_file","date_created":"2018-12-12T10:18:47Z","access_level":"open_access","checksum":"e8dc81b3e44db5a7718d7f1501ce1aa7","file_size":3532505,"file_name":"IST-2016-653-v1+1_ncomms11710_1_.pdf","content_type":"application/pdf","creator":"system","file_id":"5369"}],"scopus_import":"1","oa_version":"Published Version","oa":1,"has_accepted_license":"1","article_number":"11710","year":"2016","pubrep_id":"653","publist_id":"5906","related_material":{"record":[{"id":"7172","status":"public","relation":"dissertation_contains"}]},"volume":7,"project":[{"name":"Polarity and subcellular dynamics in plants","call_identifier":"FP7","grant_number":"282300","_id":"25716A02-B435-11E9-9278-68D0E5697425"}],"ec_funded":1,"publisher":"Nature Publishing Group","intvolume":"         7","isi":1,"publication_status":"published","external_id":{"isi":["000377899800001"]},"publication":"Nature Communications","day":"08","language":[{"iso":"eng"}],"_id":"1346","quality_controlled":"1","date_updated":"2026-04-08T13:54:44Z","month":"06","doi":"10.1038/ncomms11710","ddc":["570"],"article_processing_charge":"No","status":"public","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","type":"journal_article","date_published":"2016-06-08T00:00:00Z"}]