@inbook{748,
  abstract     = {The essay focuses on individual and collective forms of liminality in John Marlyn’s Under the Ribs of Death. Set in early twentieth-century Winnipeg, the 1957 immigrant novel explores liminal experiences related to ethnic identity, male sexuality, social class, urban spaces and turbulent economic times. As the son of a poor working-class family from Hungary, Sandor Hunyadi makes every effort to become a true Canadian and a successful businessman, but, no matter how hard he tries to overcome contemporary ethnic prejudices and economic hardships, his personal and professional life remains in liminality. In other words, the protagonist undergoes separation, fails at incorporation, and becomes stuck in transition.},
  author       = {Wenzl, Bernhard},
  booktitle    = {In-Between - Liminal Spaces in Canadian Literature and Culture},
  editor       = {Brandt, Stefan},
  isbn         = { 9783631735695},
  pages        = {91 -- 100},
  publisher    = {Peter Lang GmbH},
  title        = {{'...beyond the invisible barrier at Portage and Main': Liminality in John Marlyn's Under the Ribs of Death}},
  doi          = {10.3726/b11899},
  year         = {2017},
}

@article{749,
  abstract     = {Synaptotagmin 7 (Syt7) is thought to be a Ca2+ sensor that mediates asynchronous transmitter release and facilitation at synapses. However, Syt7 is strongly expressed in fast-spiking, parvalbumin-expressing GABAergic interneurons, and the output synapses of these neurons produce only minimal asynchronous release and show depression rather than facilitation. To resolve this apparent contradiction, we examined the effects of genetic elimination of Syt7 on synaptic transmission at the GABAergic basket cell (BC)-Purkinje cell (PC) synapse in cerebellum. Our results indicate that at the BC-PC synapse, Syt7 contributes to asynchronous release, pool replenishment, and facilitation. In combination, these three effects ensure efficient transmitter release during high-frequency activity and guarantee frequency independence of inhibition. Our results identify a distinct function of Syt7: ensuring the efficiency of high-frequency inhibitory synaptic transmission},
  author       = {Chen, Chong and Satterfield, Rachel and Young, Samuel and Jonas, Peter M},
  issn         = {2211-1247},
  journal      = {Cell Reports},
  number       = {8},
  pages        = {2082 -- 2089},
  publisher    = {Cell Press},
  title        = {{Triple function of Synaptotagmin 7 ensures efficiency of high-frequency transmission at central GABAergic synapses}},
  doi          = {10.1016/j.celrep.2017.10.122},
  volume       = {21},
  year         = {2017},
}

@inproceedings{750,
  abstract     = {Modern communication technologies allow first responders to contact thousands of potential volunteers simultaneously for support during a crisis or disaster event. However, such volunteer efforts must be well coordinated and monitored, in order to offer an effective relief to the professionals. In this paper we extend earlier work on optimally assigning volunteers to selected landmark locations. In particular, we emphasize the aspect that obtaining good assignments requires not only advanced computational tools, but also a realistic measure of distance between volunteers and landmarks. Specifically, we propose the use of the Open Street Map (OSM) driving distance instead of he previously used flight distance. We find the OSM driving distance to be better aligned with the interests of volunteers and first responders. Furthermore, we show that relying on the flying distance leads to a substantial underestimation of the number of required volunteers, causing negative side effects in case of an actual crisis situation.},
  author       = {Pielorz, Jasmin and Prandtstetter, Matthias and Straub, Markus and Lampert, Christoph},
  booktitle    = {2017 IEEE International Conference on Big Data},
  isbn         = {978-153862714-3},
  location     = {Boston, MA, United States},
  pages        = {3760 -- 3763},
  publisher    = {IEEE},
  title        = {{Optimal geospatial volunteer allocation needs realistic distances}},
  doi          = {10.1109/BigData.2017.8258375},
  year         = {2017},
}

@article{751,
  abstract     = {The basement membrane (BM) is a thin layer of extracellular matrix (ECM) beneath nearly all epithelial cell types that is critical for cellular and tissue function. It is composed of numerous components conserved among all bilaterians [1]; however, it is unknown how all of these components are generated and subsequently constructed to form a fully mature BM in the living animal. Although BM formation is thought to simply involve a process of self-assembly [2], this concept suffers from a number of logistical issues when considering its construction in vivo. First, incorporation of BM components appears to be hierarchical [3-5], yet it is unclear whether their production during embryogenesis must also be regulated in a temporal fashion. Second, many BM proteins are produced not only by the cells residing on the BM but also by surrounding cell types [6-9], and it is unclear how large, possibly insoluble protein complexes [10] are delivered into the matrix. Here we exploit our ability to live image and genetically dissect de novo BM formation during Drosophila development. This reveals that there is a temporal hierarchy of BM protein production that is essential for proper component incorporation. Furthermore, we show that BM components require secretion by migrating macrophages (hemocytes) during their developmental dispersal, which is critical for embryogenesis. Indeed, hemocyte migration is essential to deliver a subset of ECM components evenly throughout the embryo. This reveals that de novo BM construction requires a combination of both production and distribution logistics allowing for the timely delivery of core components.},
  author       = {Matsubayashi, Yutaka and Louani, Adam and Dragu, Anca and Sanchez Sanchez, Besaiz and Serna Morales, Eduardo and Yolland, Lawrence and György, Attila and Vizcay, Gema and Fleck, Roland and Heddleston, John and Chew, Teng and Siekhaus, Daria E and Stramer, Brian},
  issn         = {09609822},
  journal      = {Current Biology},
  number       = {22},
  pages        = {3526 -- 3534e.4},
  publisher    = {Cell Press},
  title        = {{A moving source of matrix components is essential for De Novo basement membrane formation}},
  doi          = {10.1016/j.cub.2017.10.001},
  volume       = {27},
  year         = {2017},
}

@misc{9844,
  author       = {Nikolic, Nela and Schreiber, Frank and Dal Co, Alma and Kiviet, Daniel and Bergmiller, Tobias and Littmann, Sten and Kuypers, Marcel and Ackermann, Martin},
  publisher    = {Public Library of Science},
  title        = {{Source data for figures and tables}},
  doi          = {10.1371/journal.pgen.1007122.s018},
  year         = {2017},
}

@misc{9845,
  abstract     = {Estimates of 13 C-arabinose and 2 H-glucose uptake from the fractions of heavy isotopes measured	in single cells},
  author       = {Nikolic, Nela and Schreiber, Frank and Dal Co, Alma and Kiviet, Daniel and Bergmiller, Tobias and Littmann, Sten and Kuypers, Marcel and Ackermann, Martin},
  publisher    = {Public Library of Science},
  title        = {{Mathematical model}},
  doi          = {10.1371/journal.pgen.1007122.s017},
  year         = {2017},
}

@misc{9846,
  author       = {Nikolic, Nela and Schreiber, Frank and Dal Co, Alma and Kiviet, Daniel and Bergmiller, Tobias and Littmann, Sten and Kuypers, Marcel and Ackermann, Martin},
  publisher    = {Public Library of Science},
  title        = {{Supplementary methods}},
  doi          = {10.1371/journal.pgen.1007122.s016},
  year         = {2017},
}

@misc{9847,
  abstract     = {information on culture conditions, phage mutagenesis, verification and lysate preparation; Raw data},
  author       = {Pleska, Maros and Guet, Calin C},
  publisher    = {The Royal Society},
  title        = {{Supplementary materials and methods; Full data set from effects of mutations in phage restriction sites during escape from restriction–modification}},
  doi          = {10.6084/m9.figshare.5633917.v1},
  year         = {2017},
}

@misc{9849,
  abstract     = {This text provides additional information about the model, a derivation of the analytic results in Eq (4), and details about simulations of an additional parameter set.},
  author       = {Lukacisinova, Marta and Novak, Sebastian and Paixao, Tiago},
  publisher    = {Public Library of Science},
  title        = {{Modelling and simulation details}},
  doi          = {10.1371/journal.pcbi.1005609.s001},
  year         = {2017},
}

@misc{9850,
  abstract     = {In this text, we discuss how a cost of resistance and the possibility of lethal mutations impact our model.},
  author       = {Lukacisinova, Marta and Novak, Sebastian and Paixao, Tiago},
  publisher    = {Public Library of Science},
  title        = {{Extensions of the model}},
  doi          = {10.1371/journal.pcbi.1005609.s002},
  year         = {2017},
}

@misc{9851,
  abstract     = {Based on the intuitive derivation of the dynamics of SIM allele frequency pM in the main text, we present a heuristic prediction for the long-term SIM allele frequencies with χ > 1 stresses and compare it to numerical simulations.},
  author       = {Lukacisinova, Marta and Novak, Sebastian and Paixao, Tiago},
  publisher    = {Public Library of Science},
  title        = {{Heuristic prediction for multiple stresses}},
  doi          = {10.1371/journal.pcbi.1005609.s003},
  year         = {2017},
}

@misc{9852,
  abstract     = {We show how different combination strategies affect the fraction of individuals that are multi-resistant.},
  author       = {Lukacisinova, Marta and Novak, Sebastian and Paixao, Tiago},
  publisher    = {Public Library of Science},
  title        = {{Resistance frequencies for different combination strategies}},
  doi          = {10.1371/journal.pcbi.1005609.s004},
  year         = {2017},
}

@misc{9855,
  abstract     = {Includes derivation of optimal estimation algorithm, generalisation to non-poisson noise statistics, correlated input noise, and implementation of in a multi-layer neural network.},
  author       = {Chalk, Matthew J and Masset, Paul and Gutkin, Boris and Denève, Sophie},
  publisher    = {Public Library of Science},
  title        = {{Supplementary appendix}},
  doi          = {10.1371/journal.pcbi.1005582.s001},
  year         = {2017},
}

@misc{9856,
  author       = {Schmidt, Tom and Barton, Nicholas H and Rasic, Gordana and Turley, Andrew and Montgomery, Brian and Iturbe Ormaetxe, Inaki and Cook, Peter and Ryan, Peter and Ritchie, Scott and Hoffmann, Ary and O’Neill, Scott and Turelli, Michael},
  publisher    = {Public Library of Science},
  title        = {{Supporting Information concerning additional likelihood analyses and results}},
  doi          = {10.1371/journal.pbio.2001894.s014},
  year         = {2017},
}

@misc{9858,
  author       = {Schmidt, Tom and Barton, Nicholas H and Rasic, Gordana and Turley, Andrew and Montgomery, Brian and Iturbe Ormaetxe, Inaki and Cook, Peter and Ryan, Peter and Ritchie, Scott and Hoffmann, Ary and O’Neill, Scott and Turelli, Michael},
  publisher    = {Public Library of Science},
  title        = {{Excel file with data on mosquito densities, Wolbachia infection status and housing characteristics}},
  doi          = {10.1371/journal.pbio.2001894.s016},
  year         = {2017},
}

@misc{9859,
  abstract     = {Lists of all differentially expressed genes in the different priming-challenge treatments (compared to the fully naïve control; xlsx file). Relevant columns include the following: sample_1 and sample_2 – treatment groups being compared; Normalised FPKM sample_1 and sample_2 – FPKM of samples being compared; log2(fold_change) – log2(FPKM sample 2/FPKM sample 1), i.e. negative means sample 1 upregulated compared with sample 2, positive means sample 2 upregulated compared with sample 1; cuffdiff test_statistic – test statistic of differential expression test; p_value – p-value of differential expression test; q_value (FDR correction) – adjusted P-value of differential expression test. (XLSX 598 kb)},
  author       = {Greenwood, Jenny and Milutinovic, Barbara and Peuß, Robert and Behrens, Sarah and Essar, Daniela and Rosenstiel, Philip and Schulenburg, Hinrich and Kurtz, Joachim},
  publisher    = {Springer Nature},
  title        = {{Additional file 1: Table S1. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae}},
  doi          = {10.6084/m9.figshare.c.3756974_d1.v1},
  year         = {2017},
}

@misc{9860,
  author       = {Greenwood, Jenny and Milutinovic, Barbara and Peuß, Robert and Behrens, Sarah and Essar, Daniela and Rosenstiel, Philip and Schulenburg, Hinrich and Kurtz, Joachim},
  publisher    = {Springer Nature},
  title        = {{Additional file 5: Table S3. of Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae}},
  doi          = {10.6084/m9.figshare.c.3756974_d5.v1},
  year         = {2017},
}

@misc{9861,
  abstract     = {As a consequence of its difference in copy number between males and females, the X chromosome is subject to unique evolutionary forces and gene regulatory mechanisms. Previous studies of Drosophila melanogaster have shown that the expression of X-linked, testis-specific reporter genes is suppressed in the male germline. However, it is not known whether this phenomenon is restricted to testis-expressed genes or if it is a more general property of genes with tissue-specific expression, which are also underrepresented on the X chromosome. To test this, we compared the expression of three tissue-specific reporter genes (ovary, accessory gland and Malpighian tubule) inserted at various autosomal and X-chromosomal locations. In contrast to testis-specific reporter genes, we found no reduction of X-linked expression in any of the other tissues. In accessory gland and Malpighian tubule, we detected higher expression of the X-linked reporter genes, which suggests that they are at least partially dosage compensated. We found no difference in the tissue-specificity of X-linked and autosomal reporter genes. These findings indicate that, in general, the X chromosome is not a detrimental environment for tissue-specific gene expression and that the suppression of X-linked expression is limited to the male germline.},
  author       = {Argyridou, Eliza and Huylmans, Ann K and Königer, Annabella and Parsch, John},
  publisher    = {Dryad},
  title        = {{Data from: X-linkage is not a general inhibitor of tissue-specific gene expression in Drosophila melanogaster}},
  doi          = {10.5061/dryad.02f6r},
  year         = {2017},
}

@article{988,
  abstract     = {The current-phase relation (CPR) of a Josephson junction (JJ) determines how the supercurrent evolves with the superconducting phase difference across the junction. Knowledge of the CPR is essential in order to understand the response of a JJ to various external parameters. Despite the rising interest in ultraclean encapsulated graphene JJs, the CPR of such junctions remains unknown. Here, we use a fully gate-tunable graphene superconducting quantum intereference device (SQUID) to determine the CPR of ballistic graphene JJs. Each of the two JJs in the SQUID is made with graphene encapsulated in hexagonal boron nitride. By independently controlling the critical current of the JJs, we can operate the SQUID either in a symmetric or asymmetric configuration. The highly asymmetric SQUID allows us to phase-bias one of the JJs and thereby directly obtain its CPR. The CPR is found to be skewed, deviating significantly from a sinusoidal form. The skewness can be tuned with the gate voltage and oscillates in antiphase with Fabry-Pérot resistance oscillations of the ballistic graphene cavity. We compare our experiments with tight-binding calculations that include realistic graphene-superconductor interfaces and find a good qualitative agreement.},
  author       = {Nanda, Gaurav and Aguilera Servin, Juan L and Rakyta, Péter and Kormányos, Andor and Kleiner, Reinhold and Koelle, Dieter and Watanabe, Kazuo and Taniguchi, Takashi and Vandersypen, Lieven and Goswami, Srijit},
  issn         = {1530-6984},
  journal      = {Nano Letters},
  number       = {6},
  pages        = {3396 -- 3401},
  publisher    = {American Chemical Society},
  title        = {{Current-phase relation of ballistic graphene Josephson junctions}},
  doi          = {10.1021/acs.nanolett.7b00097},
  volume       = {17},
  year         = {2017},
}

@inproceedings{989,
  abstract     = {We present a generalized optimal transport model in which the mass-preserving constraint for the L2-Wasserstein distance is relaxed by introducing a source term in the continuity equation. The source term is also incorporated in the path energy by means of its squared L2-norm in time of a functional with linear growth in space. This extension of the original transport model enables local density modulations, which is a desirable feature in applications such as image warping and blending. A key advantage of the use of a functional with linear growth in space is that it allows for singular sources and sinks, which can be supported on points or lines. On a technical level, the L2-norm in time ensures a disintegration of the source in time, which we use to obtain the well-posedness of the model and the existence of geodesic paths. The numerical discretization is based on the proximal splitting approach [18] and selected numerical test cases show the potential of the proposed approach. Furthermore, the approach is applied to the warping and blending of textures.},
  author       = {Maas, Jan and Rumpf, Martin and Simon, Stefan},
  editor       = {Lauze, François and Dong, Yiqiu and Bjorholm Dahl, Anders},
  issn         = {0302-9743},
  location     = {Kolding, Denmark},
  pages        = {563 -- 577},
  publisher    = {Springer},
  title        = {{Transport based image morphing with intensity modulation}},
  doi          = {10.1007/978-3-319-58771-4_45},
  volume       = {10302},
  year         = {2017},
}