---
OA_place: publisher
_id: '9962'
abstract:
- lang: eng
  text: The brain is one of the largest and most complex organs and it is composed
    of billions of neurons that communicate together enabling e.g. consciousness.
    The cerebral cortex is the largest site of neural integration in the central nervous
    system. Concerted radial migration of newly born cortical projection neurons,
    from their birthplace to their final position, is a key step in the assembly of
    the cerebral cortex. The cellular and molecular mechanisms regulating radial neuronal
    migration in vivo are however still unclear. Recent evidence suggests that distinct
    signaling cues act cell-autonomously but differentially at certain steps during
    the overall migration process. Moreover, functional analysis of genetic mosaics
    (mutant neurons present in wild-type/heterozygote environment) using the MADM
    (Mosaic Analysis with Double Markers) analyses in comparison to global knockout
    also indicate a significant degree of non-cell-autonomous and/or community effects
    in the control of cortical neuron migration. The interactions of cell-intrinsic
    (cell-autonomous) and cell-extrinsic (non-cell-autonomous) components are largely
    unknown. In part of this thesis work we established a MADM-based experimental
    strategy for the quantitative analysis of cell-autonomous gene function versus
    non-cell-autonomous and/or community effects. The direct comparison of mutant
    neurons from the genetic mosaic (cell-autonomous) to mutant neurons in the conditional
    and/or global knockout (cell-autonomous + non-cell-autonomous) allows to quantitatively
    analyze non-cell-autonomous effects. Such analysis enable the high-resolution
    analysis of projection neuron migration dynamics in distinct environments with
    concomitant isolation of genomic and proteomic profiles. Using these experimental
    paradigms and in combination with computational modeling we show and characterize
    the nature of non-cell-autonomous effects to coordinate radial neuron migration.
    Furthermore, this thesis discusses recent developments in neurodevelopment with
    focus on neuronal polarization and non-cell-autonomous mechanisms in neuronal
    migration.
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Andi H
  full_name: Hansen, Andi H
  id: 38853E16-F248-11E8-B48F-1D18A9856A87
  last_name: Hansen
citation:
  ama: Hansen AH. Cell-autonomous gene function and non-cell-autonomous effects in
    radial projection neuron migration. 2021. doi:<a href="https://doi.org/10.15479/at:ista:9962">10.15479/at:ista:9962</a>
  apa: Hansen, A. H. (2021). <i>Cell-autonomous gene function and non-cell-autonomous
    effects in radial projection neuron migration</i>. Institute of Science and Technology
    Austria. <a href="https://doi.org/10.15479/at:ista:9962">https://doi.org/10.15479/at:ista:9962</a>
  chicago: Hansen, Andi H. “Cell-Autonomous Gene Function and Non-Cell-Autonomous
    Effects in Radial Projection Neuron Migration.” Institute of Science and Technology
    Austria, 2021. <a href="https://doi.org/10.15479/at:ista:9962">https://doi.org/10.15479/at:ista:9962</a>.
  ieee: A. H. Hansen, “Cell-autonomous gene function and non-cell-autonomous effects
    in radial projection neuron migration,” Institute of Science and Technology Austria,
    2021.
  ista: Hansen AH. 2021. Cell-autonomous gene function and non-cell-autonomous effects
    in radial projection neuron migration. Institute of Science and Technology Austria.
  mla: Hansen, Andi H. <i>Cell-Autonomous Gene Function and Non-Cell-Autonomous Effects
    in Radial Projection Neuron Migration</i>. Institute of Science and Technology
    Austria, 2021, doi:<a href="https://doi.org/10.15479/at:ista:9962">10.15479/at:ista:9962</a>.
  short: A.H. Hansen, Cell-Autonomous Gene Function and Non-Cell-Autonomous Effects
    in Radial Projection Neuron Migration, Institute of Science and Technology Austria,
    2021.
corr_author: '1'
date_created: 2021-08-29T12:36:50Z
date_published: 2021-09-02T00:00:00Z
date_updated: 2026-04-08T07:19:09Z
day: '02'
ddc:
- '570'
degree_awarded: PhD
department:
- _id: GradSch
- _id: SiHi
doi: 10.15479/at:ista:9962
file:
- access_level: closed
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  creator: ahansen
  date_created: 2021-08-30T09:17:39Z
  date_updated: 2022-09-03T22:30:04Z
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  file_size: 10629190
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  file_size: 13457469
  relation: main_file
file_date_updated: 2022-09-03T22:30:04Z
has_accepted_license: '1'
keyword:
- Neuronal migration
- Non-cell-autonomous
- Cell-autonomous
- Neurodevelopmental disease
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
page: '182'
project:
- _id: 2625A13E-B435-11E9-9278-68D0E5697425
  grant_number: '24812'
  name: Molecular mechanisms of radial neuronal migration
publication_identifier:
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '8569'
    relation: part_of_dissertation
    status: public
  - id: '960'
    relation: part_of_dissertation
    status: public
status: public
supervisor:
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
title: Cell-autonomous gene function and non-cell-autonomous effects in radial projection
  neuron migration
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: dissertation
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2021'
...
---
_id: '9437'
abstract:
- lang: eng
  text: The synaptic connection from medial habenula (MHb) to interpeduncular nucleus
    (IPN) is critical for emotion-related behaviors and uniquely expresses R-type
    Ca2+ channels (Cav2.3) and auxiliary GABAB receptor (GBR) subunits, the K+-channel
    tetramerization domain-containing proteins (KCTDs). Activation of GBRs facilitates
    or inhibits transmitter release from MHb terminals depending on the IPN subnucleus,
    but the role of KCTDs is unknown. We therefore examined the localization and function
    of Cav2.3, GBRs, and KCTDs in this pathway in mice. We show in heterologous cells
    that KCTD8 and KCTD12b directly bind to Cav2.3 and that KCTD8 potentiates Cav2.3
    currents in the absence of GBRs. In the rostral IPN, KCTD8, KCTD12b, and Cav2.3
    co-localize at the presynaptic active zone. Genetic deletion indicated a bidirectional
    modulation of Cav2.3-mediated release by these KCTDs with a compensatory increase
    of KCTD8 in the active zone in KCTD12b-deficient mice. The interaction of Cav2.3
    with KCTDs therefore scales synaptic strength independent of GBR activation.
acknowledgement: We are grateful to Akari Hagiwara and Toshihisa Ohtsuka for CAST
  antibody, and Masahiko Watanabe for neurexin antibody. We thank David Adams for
  kindly providing the stable Cav2.3 cell line. Cav2.3 KO mice were kindly provided
  by Tsutomu Tanabe. This project has received funding from the European Research
  Council (ERC) and European Commission (EC), under the European Union’s Horizon 2020
  research and innovation programme (ERC grant agreement no. 694539 to Ryuichi Shigemoto,
  no. 692692 to Peter Jonas, and the Marie Skłodowska-Curie grant agreement no. 665385
  to Cihan Önal), the Swiss National Science Foundation Grant 31003A-172881 to Bernhard
  Bettler and Deutsche Forschungsgemeinschaft (For 2143) and BIOSS-2 to Akos Kulik.
article_number: e68274
article_processing_charge: No
article_type: original
author:
- first_name: Pradeep
  full_name: Bhandari, Pradeep
  id: 45EDD1BC-F248-11E8-B48F-1D18A9856A87
  last_name: Bhandari
  orcid: 0000-0003-0863-4481
- first_name: David H
  full_name: Vandael, David H
  id: 3AE48E0A-F248-11E8-B48F-1D18A9856A87
  last_name: Vandael
  orcid: 0000-0001-7577-1676
- first_name: Diego
  full_name: Fernández-Fernández, Diego
  last_name: Fernández-Fernández
- first_name: Thorsten
  full_name: Fritzius, Thorsten
  last_name: Fritzius
- first_name: David
  full_name: Kleindienst, David
  id: 42E121A4-F248-11E8-B48F-1D18A9856A87
  last_name: Kleindienst
- first_name: Hüseyin C
  full_name: Önal, Hüseyin C
  id: 4659D740-F248-11E8-B48F-1D18A9856A87
  last_name: Önal
  orcid: 0000-0002-2771-2011
- first_name: Jacqueline-Claire
  full_name: Montanaro-Punzengruber, Jacqueline-Claire
  id: 3786AB44-F248-11E8-B48F-1D18A9856A87
  last_name: Montanaro-Punzengruber
- first_name: Martin
  full_name: Gassmann, Martin
  last_name: Gassmann
- first_name: Peter M
  full_name: Jonas, Peter M
  id: 353C1B58-F248-11E8-B48F-1D18A9856A87
  last_name: Jonas
  orcid: 0000-0001-5001-4804
- first_name: Akos
  full_name: Kulik, Akos
  last_name: Kulik
- first_name: Bernhard
  full_name: Bettler, Bernhard
  last_name: Bettler
- first_name: Ryuichi
  full_name: Shigemoto, Ryuichi
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Peter
  full_name: Koppensteiner, Peter
  id: 3B8B25A8-F248-11E8-B48F-1D18A9856A87
  last_name: Koppensteiner
  orcid: 0000-0002-3509-1948
citation:
  ama: Bhandari P, Vandael DH, Fernández-Fernández D, et al. GABAB receptor auxiliary
    subunits modulate Cav2.3-mediated release from medial habenula terminals. <i>eLife</i>.
    2021;10. doi:<a href="https://doi.org/10.7554/ELIFE.68274">10.7554/ELIFE.68274</a>
  apa: Bhandari, P., Vandael, D. H., Fernández-Fernández, D., Fritzius, T., Kleindienst,
    D., Önal, C., … Koppensteiner, P. (2021). GABAB receptor auxiliary subunits modulate
    Cav2.3-mediated release from medial habenula terminals. <i>ELife</i>. eLife Sciences
    Publications. <a href="https://doi.org/10.7554/ELIFE.68274">https://doi.org/10.7554/ELIFE.68274</a>
  chicago: Bhandari, Pradeep, David H Vandael, Diego Fernández-Fernández, Thorsten
    Fritzius, David Kleindienst, Cihan Önal, Jacqueline-Claire Montanaro-Punzengruber,
    et al. “GABAB Receptor Auxiliary Subunits Modulate Cav2.3-Mediated Release from
    Medial Habenula Terminals.” <i>ELife</i>. eLife Sciences Publications, 2021. <a
    href="https://doi.org/10.7554/ELIFE.68274">https://doi.org/10.7554/ELIFE.68274</a>.
  ieee: P. Bhandari <i>et al.</i>, “GABAB receptor auxiliary subunits modulate Cav2.3-mediated
    release from medial habenula terminals,” <i>eLife</i>, vol. 10. eLife Sciences
    Publications, 2021.
  ista: Bhandari P, Vandael DH, Fernández-Fernández D, Fritzius T, Kleindienst D,
    Önal C, Montanaro-Punzengruber J-C, Gassmann M, Jonas PM, Kulik A, Bettler B,
    Shigemoto R, Koppensteiner P. 2021. GABAB receptor auxiliary subunits modulate
    Cav2.3-mediated release from medial habenula terminals. eLife. 10, e68274.
  mla: Bhandari, Pradeep, et al. “GABAB Receptor Auxiliary Subunits Modulate Cav2.3-Mediated
    Release from Medial Habenula Terminals.” <i>ELife</i>, vol. 10, e68274, eLife
    Sciences Publications, 2021, doi:<a href="https://doi.org/10.7554/ELIFE.68274">10.7554/ELIFE.68274</a>.
  short: P. Bhandari, D.H. Vandael, D. Fernández-Fernández, T. Fritzius, D. Kleindienst,
    C. Önal, J.-C. Montanaro-Punzengruber, M. Gassmann, P.M. Jonas, A. Kulik, B. Bettler,
    R. Shigemoto, P. Koppensteiner, ELife 10 (2021).
date_created: 2021-05-30T22:01:23Z
date_published: 2021-04-29T00:00:00Z
date_updated: 2026-08-12T22:31:01Z
day: '29'
ddc:
- '570'
department:
- _id: RySh
- _id: PeJo
doi: 10.7554/ELIFE.68274
ec_funded: 1
external_id:
  isi:
  - '000651761700001'
  pmid:
  - '33913808'
file:
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  date_updated: 2021-05-31T09:43:09Z
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  success: 1
file_date_updated: 2021-05-31T09:43:09Z
has_accepted_license: '1'
intvolume: '        10'
isi: 1
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 25CA28EA-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '694539'
  name: 'In situ analysis of single channel subunit composition in neurons: physiological
    implication in synaptic plasticity and behaviour'
- _id: 25B7EB9E-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '692692'
  name: Biophysics and circuit function of a giant cortical glutamatergic synapse
- _id: 2564DBCA-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '665385'
  name: International IST Doctoral Program
publication: eLife
publication_identifier:
  eissn:
  - 2050-084X
publication_status: published
publisher: eLife Sciences Publications
quality_controlled: '1'
related_material:
  link:
  - relation: earlier_version
    url: https://doi.org/10.1101/2020.04.16.045112
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    relation: dissertation_contains
    status: public
  - id: '9562'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: GABAB receptor auxiliary subunits modulate Cav2.3-mediated release from medial
  habenula terminals
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 10
year: '2021'
...
---
OA_place: publisher
_id: '9562'
abstract:
- lang: eng
  text: Left-right asymmetries can be considered a fundamental organizational principle
    of the vertebrate central nervous system. The hippocampal CA3-CA1 pyramidal cell
    synaptic connection shows an input-side dependent asymmetry where the hemispheric
    location of the presynaptic CA3 neuron determines the synaptic properties. Left-input
    synapses terminating on apical dendrites in stratum radiatum have a higher density
    of NMDA receptor subunit GluN2B, a lower density of AMPA receptor subunit GluA1
    and smaller areas with less often perforated PSDs. On the other hand, left-input
    synapses terminating on basal dendrites in stratum oriens have lower GluN2B densities
    than right-input ones. Apical and basal synapses further employ different signaling
    pathways involved in LTP. SDS-digested freeze-fracture replica labeling can visualize
    synaptic membrane proteins with high sensitivity and resolution, and has been
    used to reveal the asymmetry at the electron microscopic level. However, it requires
    time-consuming manual demarcation of the synaptic surface for quantitative measurements.
    To facilitate the analysis of replica labeling, I first developed a software named
    Darea, which utilizes deep-learning to automatize this demarcation. With Darea
    I characterized the synaptic distribution of NMDA and AMPA receptors as well as
    the voltage-gated Ca2+ channels in CA1 stratum radiatum and oriens. Second, I
    explored the role of GluN2B and its carboxy-terminus in the establishment of input-side
    dependent hippocampal asymmetry. In conditional knock-out mice lacking GluN2B
    expression in CA1 and GluN2B-2A swap mice, where GluN2B carboxy-terminus was exchanged
    to that of GluN2A, no significant asymmetries of GluN2B, GluA1 and PSD area were
    detected. We further discovered a previously unknown functional asymmetry of GluN2A,
    which was also lost in the swap mouse. These results demonstrate that GluN2B carboxy-terminus
    plays a critical role in normal formation of input-side dependent asymmetry.
acknowledged_ssus:
- _id: EM-Fac
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: David
  full_name: Kleindienst, David
  id: 42E121A4-F248-11E8-B48F-1D18A9856A87
  last_name: Kleindienst
citation:
  ama: 'Kleindienst D. 2B or not 2B: Hippocampal asymmetries mediated by NMDA receptor
    subunit GluN2B C-terminus and high-throughput image analysis by Deep-Learning.
    2021. doi:<a href="https://doi.org/10.15479/at:ista:9562">10.15479/at:ista:9562</a>'
  apa: 'Kleindienst, D. (2021). <i>2B or not 2B: Hippocampal asymmetries mediated
    by NMDA receptor subunit GluN2B C-terminus and high-throughput image analysis
    by Deep-Learning</i>. Institute of Science and Technology Austria. <a href="https://doi.org/10.15479/at:ista:9562">https://doi.org/10.15479/at:ista:9562</a>'
  chicago: 'Kleindienst, David. “2B or Not 2B: Hippocampal Asymmetries Mediated by
    NMDA Receptor Subunit GluN2B C-Terminus and High-Throughput Image Analysis by
    Deep-Learning.” Institute of Science and Technology Austria, 2021. <a href="https://doi.org/10.15479/at:ista:9562">https://doi.org/10.15479/at:ista:9562</a>.'
  ieee: 'D. Kleindienst, “2B or not 2B: Hippocampal asymmetries mediated by NMDA receptor
    subunit GluN2B C-terminus and high-throughput image analysis by Deep-Learning,”
    Institute of Science and Technology Austria, 2021.'
  ista: 'Kleindienst D. 2021. 2B or not 2B: Hippocampal asymmetries mediated by NMDA
    receptor subunit GluN2B C-terminus and high-throughput image analysis by Deep-Learning.
    Institute of Science and Technology Austria.'
  mla: 'Kleindienst, David. <i>2B or Not 2B: Hippocampal Asymmetries Mediated by NMDA
    Receptor Subunit GluN2B C-Terminus and High-Throughput Image Analysis by Deep-Learning</i>.
    Institute of Science and Technology Austria, 2021, doi:<a href="https://doi.org/10.15479/at:ista:9562">10.15479/at:ista:9562</a>.'
  short: 'D. Kleindienst, 2B or Not 2B: Hippocampal Asymmetries Mediated by NMDA Receptor
    Subunit GluN2B C-Terminus and High-Throughput Image Analysis by Deep-Learning,
    Institute of Science and Technology Austria, 2021.'
corr_author: '1'
date_created: 2021-06-17T14:10:47Z
date_published: 2021-06-01T00:00:00Z
date_updated: 2026-07-06T13:11:44Z
day: '01'
ddc:
- '570'
degree_awarded: PhD
department:
- _id: GradSch
- _id: RySh
doi: 10.15479/at:ista:9562
file:
- access_level: open_access
  checksum: 659df5518db495f679cb1df9e9bd1d94
  content_type: application/pdf
  creator: dkleindienst
  date_created: 2021-06-17T14:03:14Z
  date_updated: 2022-07-02T22:30:04Z
  embargo: 2022-07-01
  file_id: '9563'
  file_name: Thesis.pdf
  file_size: 77299142
  relation: main_file
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  date_updated: 2022-07-02T22:30:04Z
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  file_name: Thesis_source.zip
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  relation: source_file
file_date_updated: 2022-07-02T22:30:04Z
has_accepted_license: '1'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: '124'
publication_identifier:
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '9437'
    relation: part_of_dissertation
    status: public
  - id: '612'
    relation: part_of_dissertation
    status: public
  - id: '8532'
    relation: part_of_dissertation
    status: public
  - id: '9756'
    relation: part_of_dissertation
    status: public
status: public
supervisor:
- first_name: Ryuichi
  full_name: Shigemoto, Ryuichi
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
title: '2B or not 2B: Hippocampal asymmetries mediated by NMDA receptor subunit GluN2B
  C-terminus and high-throughput image analysis by Deep-Learning'
type: dissertation
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2021'
...
---
_id: '9756'
abstract:
- lang: eng
  text: High-resolution visualization and quantification of membrane proteins contribute
    to the understanding of their functions and the roles they play in physiological
    and pathological conditions. Sodium dodecyl sulfate-digested freeze-fracture replica
    labeling (SDS-FRL) is a powerful electron microscopy method to study quantitatively
    the two-dimensional distribution of transmembrane proteins and their tightly associated
    proteins. During treatment with SDS, intracellular organelles and proteins not
    anchored to the replica are dissolved, whereas integral membrane proteins captured
    and stabilized by carbon/platinum deposition remain on the replica. Their intra-
    and extracellular domains become exposed on the surface of the replica, facilitating
    the accessibility of antibodies and, therefore, providing higher labeling efficiency
    than those obtained with other immunoelectron microscopy techniques. In this chapter,
    we describe the protocols of SDS-FRL adapted for mammalian brain samples, and
    optimization of the SDS treatment to increase the labeling efficiency for quantification
    of Cav2.1, the alpha subunit of P/Q-type voltage-dependent calcium channels utilizing
    deep learning algorithms.
acknowledgement: This work was supported by the European Union (European Research
  Council Advanced grant no. 694539 and Human Brain Project Ref. 720270 to R. S.)
  and the Austrian Academy of Sciences (DOC fellowship to D.K.).
alternative_title:
- Neuromethods
article_processing_charge: No
author:
- first_name: Walter
  full_name: Kaufmann, Walter
  id: 3F99E422-F248-11E8-B48F-1D18A9856A87
  last_name: Kaufmann
  orcid: 0000-0001-9735-5315
- first_name: David
  full_name: Kleindienst, David
  id: 42E121A4-F248-11E8-B48F-1D18A9856A87
  last_name: Kleindienst
- first_name: Harumi
  full_name: Harada, Harumi
  id: 2E55CDF2-F248-11E8-B48F-1D18A9856A87
  last_name: Harada
  orcid: 0000-0001-7429-7896
- first_name: Ryuichi
  full_name: Shigemoto, Ryuichi
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
citation:
  ama: 'Kaufmann W, Kleindienst D, Harada H, Shigemoto R. High-Resolution localization
    and quantitation of membrane proteins by SDS-digested freeze-fracture replica
    labeling (SDS-FRL). In: <i>Receptor and Ion Channel Detection in the Brain</i>.
    Vol 169. Neuromethods. New York: Humana Press; 2021:267-283. doi:<a href="https://doi.org/10.1007/978-1-0716-1522-5_19">10.1007/978-1-0716-1522-5_19</a>'
  apa: 'Kaufmann, W., Kleindienst, D., Harada, H., &#38; Shigemoto, R. (2021). High-Resolution
    localization and quantitation of membrane proteins by SDS-digested freeze-fracture
    replica labeling (SDS-FRL). In <i>Receptor and Ion Channel Detection in the Brain</i>
    (Vol. 169, pp. 267–283). New York: Humana Press. <a href="https://doi.org/10.1007/978-1-0716-1522-5_19">https://doi.org/10.1007/978-1-0716-1522-5_19</a>'
  chicago: 'Kaufmann, Walter, David Kleindienst, Harumi Harada, and Ryuichi Shigemoto.
    “High-Resolution Localization and Quantitation of Membrane Proteins by SDS-Digested
    Freeze-Fracture Replica Labeling (SDS-FRL).” In <i>Receptor and Ion Channel Detection
    in the Brain</i>, 169:267–83. Neuromethods. New York: Humana Press, 2021. <a href="https://doi.org/10.1007/978-1-0716-1522-5_19">https://doi.org/10.1007/978-1-0716-1522-5_19</a>.'
  ieee: 'W. Kaufmann, D. Kleindienst, H. Harada, and R. Shigemoto, “High-Resolution
    localization and quantitation of membrane proteins by SDS-digested freeze-fracture
    replica labeling (SDS-FRL),” in <i>Receptor and Ion Channel Detection in the Brain</i>,
    vol. 169, New York: Humana Press, 2021, pp. 267–283.'
  ista: 'Kaufmann W, Kleindienst D, Harada H, Shigemoto R. 2021.High-Resolution localization
    and quantitation of membrane proteins by SDS-digested freeze-fracture replica
    labeling (SDS-FRL). In: Receptor and Ion Channel Detection in the Brain. Neuromethods,
    vol. 169, 267–283.'
  mla: Kaufmann, Walter, et al. “High-Resolution Localization and Quantitation of
    Membrane Proteins by SDS-Digested Freeze-Fracture Replica Labeling (SDS-FRL).”
    <i>Receptor and Ion Channel Detection in the Brain</i>, vol. 169, Humana Press,
    2021, pp. 267–83, doi:<a href="https://doi.org/10.1007/978-1-0716-1522-5_19">10.1007/978-1-0716-1522-5_19</a>.
  short: W. Kaufmann, D. Kleindienst, H. Harada, R. Shigemoto, in:, Receptor and Ion
    Channel Detection in the Brain, Humana Press, New York, 2021, pp. 267–283.
corr_author: '1'
das_tickbox: '1'
date_created: 2021-07-30T09:34:56Z
date_published: 2021-07-27T00:00:00Z
date_updated: 2026-08-12T22:31:01Z
day: '27'
ddc:
- '573'
department:
- _id: RySh
- _id: EM-Fac
doi: 10.1007/978-1-0716-1522-5_19
ec_funded: 1
has_accepted_license: '1'
intvolume: '       169'
keyword:
- 'Freeze-fracture replica: Deep learning'
- Immunogold labeling
- Integral membrane protein
- Electron microscopy
language:
- iso: eng
month: '07'
oa_version: None
page: 267-283
place: New York
project:
- _id: 25CA28EA-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '694539'
  name: 'In situ analysis of single channel subunit composition in neurons: physiological
    implication in synaptic plasticity and behaviour'
- _id: 25CBA828-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '720270'
  name: Human Brain Project Specific Grant Agreement 1
publication: Receptor and Ion Channel Detection in the Brain
publication_identifier:
  eisbn:
  - '9781071615225'
  isbn:
  - '9781071615218'
publication_status: published
publisher: Humana Press
quality_controlled: '1'
related_material:
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    status: public
scopus_import: '1'
series_title: Neuromethods
status: public
title: High-Resolution localization and quantitation of membrane proteins by SDS-digested
  freeze-fracture replica labeling (SDS-FRL)
type: book_chapter
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 169
year: '2021'
...
---
OA_place: repository
OA_type: green
_id: '10816'
abstract:
- lang: eng
  text: Pattern separation is a fundamental brain computation that converts small
    differences in input patterns into large differences in output patterns. Several
    synaptic mechanisms of pattern separation have been proposed, including code expansion,
    inhibition and plasticity; however, which of these mechanisms play a role in the
    entorhinal cortex (EC)–dentate gyrus (DG)–CA3 circuit, a classical pattern separation
    circuit, remains unclear. Here we show that a biologically realistic, full-scale
    EC–DG–CA3 circuit model, including granule cells (GCs) and parvalbumin-positive
    inhibitory interneurons (PV+-INs) in the DG, is an efficient pattern separator.
    Both external gamma-modulated inhibition and internal lateral inhibition mediated
    by PV+-INs substantially contributed to pattern separation. Both local connectivity
    and fast signaling at GC–PV+-IN synapses were important for maximum effectiveness.
    Similarly, mossy fiber synapses with conditional detonator properties contributed
    to pattern separation. By contrast, perforant path synapses with Hebbian synaptic
    plasticity and direct EC–CA3 connection shifted the network towards pattern completion.
    Our results demonstrate that the specific properties of cells and synapses optimize
    higher-order computations in biological networks and might be useful to improve
    the deep learning capabilities of technical networks.
acknowledged_ssus:
- _id: SSU
acknowledgement: We thank A. Aertsen, N. Kopell, W. Maass, A. Roth, F. Stella and
  T. Vogels for critically reading earlier versions of the manuscript. We are grateful
  to F. Marr and C. Altmutter for excellent technical assistance, E. Kralli-Beller
  for manuscript editing, and the Scientific Service Units of IST Austria for efficient
  support. Finally, we thank T. Carnevale, L. Erdös, M. Hines, D. Nykamp and D. Schröder
  for useful discussions, and R. Friedrich and S. Wiechert for sharing unpublished
  data. This project received funding from the European Research Council (ERC) under
  the European Union’s Horizon 2020 research and innovation programme (grant agreement
  no. 692692, P.J.) and the Fond zur Förderung der Wissenschaftlichen Forschung (Z
  312-B27, Wittgenstein award to P.J. and P 31815 to S.J.G.).
article_processing_charge: No
article_type: original
author:
- first_name: José
  full_name: Guzmán, José
  id: 30CC5506-F248-11E8-B48F-1D18A9856A87
  last_name: Guzmán
  orcid: 0000-0003-2209-5242
- first_name: Alois
  full_name: Schlögl, Alois
  id: 45BF87EE-F248-11E8-B48F-1D18A9856A87
  last_name: Schlögl
  orcid: 0000-0002-5621-8100
- first_name: 'Claudia '
  full_name: 'Espinoza Martinez, Claudia '
  id: 31FFEE2E-F248-11E8-B48F-1D18A9856A87
  last_name: Espinoza Martinez
  orcid: 0000-0003-4710-2082
- first_name: Xiaomin
  full_name: Zhang, Xiaomin
  id: 423EC9C2-F248-11E8-B48F-1D18A9856A87
  last_name: Zhang
  orcid: 0000-0003-0256-6529
- first_name: Benjamin
  full_name: Suter, Benjamin
  id: 4952F31E-F248-11E8-B48F-1D18A9856A87
  last_name: Suter
  orcid: 0000-0002-9885-6936
- first_name: Peter M
  full_name: Jonas, Peter M
  id: 353C1B58-F248-11E8-B48F-1D18A9856A87
  last_name: Jonas
  orcid: 0000-0001-5001-4804
biorxivid: 1
citation:
  ama: Guzmán J, Schlögl A, Espinoza Martinez C, Zhang X, Suter B, Jonas PM. How connectivity
    rules and synaptic properties shape the efficacy of pattern separation in the
    entorhinal cortex–dentate gyrus–CA3 network. <i>Nature Computational Science</i>.
    2021;1(12):830-842. doi:<a href="https://doi.org/10.1038/s43588-021-00157-1">10.1038/s43588-021-00157-1</a>
  apa: Guzmán, J., Schlögl, A., Espinoza Martinez, C., Zhang, X., Suter, B., &#38;
    Jonas, P. M. (2021). How connectivity rules and synaptic properties shape the
    efficacy of pattern separation in the entorhinal cortex–dentate gyrus–CA3 network.
    <i>Nature Computational Science</i>. Springer Nature. <a href="https://doi.org/10.1038/s43588-021-00157-1">https://doi.org/10.1038/s43588-021-00157-1</a>
  chicago: Guzmán, José, Alois Schlögl, Claudia  Espinoza Martinez, Xiaomin Zhang,
    Benjamin Suter, and Peter M Jonas. “How Connectivity Rules and Synaptic Properties
    Shape the Efficacy of Pattern Separation in the Entorhinal Cortex–Dentate Gyrus–CA3
    Network.” <i>Nature Computational Science</i>. Springer Nature, 2021. <a href="https://doi.org/10.1038/s43588-021-00157-1">https://doi.org/10.1038/s43588-021-00157-1</a>.
  ieee: J. Guzmán, A. Schlögl, C. Espinoza Martinez, X. Zhang, B. Suter, and P. M.
    Jonas, “How connectivity rules and synaptic properties shape the efficacy of pattern
    separation in the entorhinal cortex–dentate gyrus–CA3 network,” <i>Nature Computational
    Science</i>, vol. 1, no. 12. Springer Nature, pp. 830–842, 2021.
  ista: Guzmán J, Schlögl A, Espinoza Martinez C, Zhang X, Suter B, Jonas PM. 2021.
    How connectivity rules and synaptic properties shape the efficacy of pattern separation
    in the entorhinal cortex–dentate gyrus–CA3 network. Nature Computational Science.
    1(12), 830–842.
  mla: Guzmán, José, et al. “How Connectivity Rules and Synaptic Properties Shape
    the Efficacy of Pattern Separation in the Entorhinal Cortex–Dentate Gyrus–CA3
    Network.” <i>Nature Computational Science</i>, vol. 1, no. 12, Springer Nature,
    2021, pp. 830–42, doi:<a href="https://doi.org/10.1038/s43588-021-00157-1">10.1038/s43588-021-00157-1</a>.
  short: J. Guzmán, A. Schlögl, C. Espinoza Martinez, X. Zhang, B. Suter, P.M. Jonas,
    Nature Computational Science 1 (2021) 830–842.
corr_author: '1'
date_created: 2022-03-04T08:32:36Z
date_published: 2021-12-16T00:00:00Z
date_updated: 2026-07-28T12:15:17Z
day: '16'
ddc:
- '610'
department:
- _id: PeJo
doi: 10.1038/s43588-021-00157-1
ec_funded: 1
external_id:
  biorxivid:
  - 10.1101/647800
  isi:
  - '000888567500015'
file:
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intvolume: '         1'
isi: 1
issue: '12'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Submitted Version
page: 830-842
project:
- _id: 25B7EB9E-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '692692'
  name: Biophysics and circuit function of a giant cortical glutamatergic synapse
- _id: 25C5A090-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: Z00312
  name: Synaptic communication in neuronal microcircuits
publication: Nature Computational Science
publication_identifier:
  issn:
  - 2662-8457
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA Website
    relation: press_release
    url: https://ista.ac.at/en/news/spot-the-difference/
  record:
  - id: '10110'
    relation: software
    status: public
scopus_import: '1'
status: public
title: How connectivity rules and synaptic properties shape the efficacy of pattern
  separation in the entorhinal cortex–dentate gyrus–CA3 network
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 1
year: '2021'
...
---
_id: '10110'
abstract:
- lang: eng
  text: Pattern separation is a fundamental brain computation that converts small
    differences in input patterns into large differences in output patterns. Several
    synaptic mechanisms of pattern separation have been proposed, including code expansion,
    inhibition and plasticity; however, which of these mechanisms play a role in the
    entorhinal cortex (EC)–dentate gyrus (DG)–CA3 circuit, a classical pattern separation
    circuit, remains unclear. Here we show that a biologically realistic, full-scale
    EC–DG–CA3 circuit model, including granule cells (GCs) and parvalbumin-positive
    inhibitory interneurons (PV+-INs) in the DG, is an efficient pattern separator.
    Both external gamma-modulated inhibition and internal lateral inhibition mediated
    by PV+-INs substantially contributed to pattern separation. Both local connectivity
    and fast signaling at GC–PV+-IN synapses were important for maximum effectiveness.
    Similarly, mossy fiber synapses with conditional detonator properties contributed
    to pattern separation. By contrast, perforant path synapses with Hebbian synaptic
    plasticity and direct EC–CA3 connection shifted the network towards pattern completion.
    Our results demonstrate that the specific properties of cells and synapses optimize
    higher-order computations in biological networks and might be useful to improve
    the deep learning capabilities of technical networks.
author:
- first_name: José
  full_name: Guzmán, José
  id: 30CC5506-F248-11E8-B48F-1D18A9856A87
  last_name: Guzmán
  orcid: 0000-0003-2209-5242
- first_name: Alois
  full_name: Schlögl, Alois
  id: 45BF87EE-F248-11E8-B48F-1D18A9856A87
  last_name: Schlögl
  orcid: 0000-0002-5621-8100
- first_name: 'Claudia '
  full_name: 'Espinoza Martinez, Claudia '
  id: 31FFEE2E-F248-11E8-B48F-1D18A9856A87
  last_name: Espinoza Martinez
  orcid: 0000-0003-4710-2082
- first_name: Xiaomin
  full_name: Zhang, Xiaomin
  id: 423EC9C2-F248-11E8-B48F-1D18A9856A87
  last_name: Zhang
  orcid: 0000-0003-0256-6529
- first_name: Benjamin
  full_name: Suter, Benjamin
  id: 4952F31E-F248-11E8-B48F-1D18A9856A87
  last_name: Suter
  orcid: 0000-0002-9885-6936
- first_name: Peter M
  full_name: Jonas, Peter M
  id: 353C1B58-F248-11E8-B48F-1D18A9856A87
  last_name: Jonas
  orcid: 0000-0001-5001-4804
citation:
  ama: Guzmán J, Schlögl A, Espinoza Martinez C, Zhang X, Suter B, Jonas PM. How connectivity
    rules and synaptic properties shape the efficacy of pattern separation in the
    entorhinal cortex–dentate gyrus–CA3 network. 2021. doi:<a href="https://doi.org/10.15479/AT:ISTA:10110">10.15479/AT:ISTA:10110</a>
  apa: Guzmán, J., Schlögl, A., Espinoza Martinez, C., Zhang, X., Suter, B., &#38;
    Jonas, P. M. (2021). How connectivity rules and synaptic properties shape the
    efficacy of pattern separation in the entorhinal cortex–dentate gyrus–CA3 network.
    IST Austria. <a href="https://doi.org/10.15479/AT:ISTA:10110">https://doi.org/10.15479/AT:ISTA:10110</a>
  chicago: Guzmán, José, Alois Schlögl, Claudia  Espinoza Martinez, Xiaomin Zhang,
    Benjamin Suter, and Peter M Jonas. “How Connectivity Rules and Synaptic Properties
    Shape the Efficacy of Pattern Separation in the Entorhinal Cortex–Dentate Gyrus–CA3
    Network.” IST Austria, 2021. <a href="https://doi.org/10.15479/AT:ISTA:10110">https://doi.org/10.15479/AT:ISTA:10110</a>.
  ieee: J. Guzmán, A. Schlögl, C. Espinoza Martinez, X. Zhang, B. Suter, and P. M.
    Jonas, “How connectivity rules and synaptic properties shape the efficacy of pattern
    separation in the entorhinal cortex–dentate gyrus–CA3 network.” IST Austria, 2021.
  ista: Guzmán J, Schlögl A, Espinoza Martinez C, Zhang X, Suter B, Jonas PM. 2021.
    How connectivity rules and synaptic properties shape the efficacy of pattern separation
    in the entorhinal cortex–dentate gyrus–CA3 network, IST Austria, <a href="https://doi.org/10.15479/AT:ISTA:10110">10.15479/AT:ISTA:10110</a>.
  mla: Guzmán, José, et al. <i>How Connectivity Rules and Synaptic Properties Shape
    the Efficacy of Pattern Separation in the Entorhinal Cortex–Dentate Gyrus–CA3
    Network</i>. IST Austria, 2021, doi:<a href="https://doi.org/10.15479/AT:ISTA:10110">10.15479/AT:ISTA:10110</a>.
  short: J. Guzmán, A. Schlögl, C. Espinoza Martinez, X. Zhang, B. Suter, P.M. Jonas,
    (2021).
date_created: 2021-10-08T06:44:22Z
date_published: 2021-12-16T00:00:00Z
date_updated: 2026-08-12T22:31:02Z
day: '16'
ddc:
- '005'
department:
- _id: PeJo
- _id: ScienComp
doi: 10.15479/AT:ISTA:10110
file:
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has_accepted_license: '1'
license: https://opensource.org/licenses/GPL-3.0
month: '12'
oa: 1
publisher: IST Austria
related_material:
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    relation: press_release
    url: https://ist.ac.at/en/news/spot-the-difference/
  record:
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    status: public
status: public
title: How connectivity rules and synaptic properties shape the efficacy of pattern
  separation in the entorhinal cortex–dentate gyrus–CA3 network
tmp:
  legal_code_url: https://www.gnu.org/licenses/gpl-3.0.en.html
  name: GNU General Public License 3.0
  short: GPL 3.0
type: software
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2021'
...
---
_id: '10299'
abstract:
- lang: eng
  text: Turbulence generally arises in shear flows if velocities and hence, inertial
    forces are sufficiently large. In striking contrast, viscoelastic fluids can exhibit
    disordered motion even at vanishing inertia. Intermediate between these cases,
    a state of chaotic motion, “elastoinertial turbulence” (EIT), has been observed
    in a narrow Reynolds number interval. We here determine the origin of EIT in experiments
    and show that characteristic EIT structures can be detected across an unexpectedly
    wide range of parameters. Close to onset, a pattern of chevron-shaped streaks
    emerges in qualitative agreement with linear and weakly nonlinear theory. However,
    in experiments, the dynamics remain weakly chaotic, and the instability can be
    traced to far lower Reynolds numbers than permitted by theory. For increasing
    inertia, the flow undergoes a transformation to a wall mode composed of inclined
    near-wall streaks and shear layers. This mode persists to what is known as the
    “maximum drag reduction limit,” and overall EIT is found to dominate viscoelastic
    flows across more than three orders of magnitude in Reynolds number.
acknowledgement: We thank Y. Dubief, R. Kerswell, E. Marensi, V. Shankar, V. Steinberg,
  and V. Terrapon for discussions and helpful comments. A.V. and B.H. acknowledge
  funding from the Austrian Science Fund, grant I4188-N30, within the Deutsche Forschungsgemeinschaft
  research unit FOR 2688.
article_number: e2102350118
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: George H
  full_name: Choueiri, George H
  id: 448BD5BC-F248-11E8-B48F-1D18A9856A87
  last_name: Choueiri
- first_name: Jose M
  full_name: Lopez Alonso, Jose M
  id: 40770848-F248-11E8-B48F-1D18A9856A87
  last_name: Lopez Alonso
  orcid: 0000-0002-0384-2022
- first_name: Atul
  full_name: Varshney, Atul
  id: 2A2006B2-F248-11E8-B48F-1D18A9856A87
  last_name: Varshney
  orcid: 0000-0002-3072-5999
- first_name: Sarath
  full_name: Sankar, Sarath
  last_name: Sankar
- first_name: Björn
  full_name: Hof, Björn
  id: 3A374330-F248-11E8-B48F-1D18A9856A87
  last_name: Hof
  orcid: 0000-0003-2057-2754
citation:
  ama: Choueiri GH, Lopez Alonso JM, Varshney A, Sankar S, Hof B. Experimental observation
    of the origin and structure of elastoinertial turbulence. <i>Proceedings of the
    National Academy of Sciences of the United States of America</i>. 2021;118(45).
    doi:<a href="https://doi.org/10.1073/pnas.2102350118">10.1073/pnas.2102350118</a>
  apa: Choueiri, G. H., Lopez Alonso, J. M., Varshney, A., Sankar, S., &#38; Hof,
    B. (2021). Experimental observation of the origin and structure of elastoinertial
    turbulence. <i>Proceedings of the National Academy of Sciences of the United States
    of America</i>. National Academy of Sciences. <a href="https://doi.org/10.1073/pnas.2102350118">https://doi.org/10.1073/pnas.2102350118</a>
  chicago: Choueiri, George H, Jose M Lopez Alonso, Atul Varshney, Sarath Sankar,
    and Björn Hof. “Experimental Observation of the Origin and Structure of Elastoinertial
    Turbulence.” <i>Proceedings of the National Academy of Sciences of the United
    States of America</i>. National Academy of Sciences, 2021. <a href="https://doi.org/10.1073/pnas.2102350118">https://doi.org/10.1073/pnas.2102350118</a>.
  ieee: G. H. Choueiri, J. M. Lopez Alonso, A. Varshney, S. Sankar, and B. Hof, “Experimental
    observation of the origin and structure of elastoinertial turbulence,” <i>Proceedings
    of the National Academy of Sciences of the United States of America</i>, vol.
    118, no. 45. National Academy of Sciences, 2021.
  ista: Choueiri GH, Lopez Alonso JM, Varshney A, Sankar S, Hof B. 2021. Experimental
    observation of the origin and structure of elastoinertial turbulence. Proceedings
    of the National Academy of Sciences of the United States of America. 118(45),
    e2102350118.
  mla: Choueiri, George H., et al. “Experimental Observation of the Origin and Structure
    of Elastoinertial Turbulence.” <i>Proceedings of the National Academy of Sciences
    of the United States of America</i>, vol. 118, no. 45, e2102350118, National Academy
    of Sciences, 2021, doi:<a href="https://doi.org/10.1073/pnas.2102350118">10.1073/pnas.2102350118</a>.
  short: G.H. Choueiri, J.M. Lopez Alonso, A. Varshney, S. Sankar, B. Hof, Proceedings
    of the National Academy of Sciences of the United States of America 118 (2021).
corr_author: '1'
date_created: 2021-11-17T13:24:24Z
date_published: 2021-11-03T00:00:00Z
date_updated: 2026-08-12T22:31:04Z
day: '03'
department:
- _id: BjHo
doi: 10.1073/pnas.2102350118
external_id:
  arxiv:
  - '2103.00023'
  isi:
  - '000720926900019'
  pmid:
  - ' 34732570'
intvolume: '       118'
isi: 1
issue: '45'
keyword:
- multidisciplinary
- elastoinertial turbulence
- viscoelastic flows
- elastic instability
- drag reduction
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2103.00023
month: '11'
oa: 1
oa_version: Preprint
pmid: 1
project:
- _id: 238B8092-32DE-11EA-91FC-C7463DDC885E
  call_identifier: FWF
  grant_number: I04188
  name: Instabilities in pulsating pipe flow in complex fluids
publication: Proceedings of the National Academy of Sciences of the United States
  of America
publication_identifier:
  eissn:
  - 1091-6490
  issn:
  - 0027-8424
publication_status: published
publisher: National Academy of Sciences
quality_controlled: '1'
related_material:
  record:
  - id: '19906'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Experimental observation of the origin and structure of elastoinertial turbulence
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 118
year: '2021'
...
---
_id: '9760'
abstract:
- lang: eng
  text: "The quantum approximate optimization algorithm (QAOA) is a prospective near-term
    quantum algorithm due to its modest circuit depth and promising benchmarks. However,
    an external parameter optimization required in the QAOA could become a performance
    bottleneck. This motivates studies of the optimization landscape and search for
    heuristic ways of parameter initialization. In this work we visualize the optimization
    landscape of the QAOA applied to the MaxCut problem on random graphs, demonstrating
    that random initialization of the QAOA is prone to converging to local minima
    with suboptimal performance. We introduce the initialization of QAOA parameters
    based on the Trotterized quantum annealing (TQA) protocol, parameterized by the
    Trotter time step. We find that the TQA initialization allows to circumvent\r\nthe
    issue of false minima for a broad range of time steps, yielding the same performance
    as the best result out of an exponentially scaling number of random initializations.
    Moreover, we demonstrate that the optimal value of the time step coincides with
    the point of proliferation of Trotter errors in quantum annealing. Our results
    suggest practical ways of initializing QAOA protocols on near-term quantum devices
    and reveal new connections between QAOA and quantum annealing."
acknowledgement: We would like to thank D. Abanin and R. Medina for fruitful discussions
  and A. Smith and I. Kim for valuable feedback on the manuscript. We acknowledge
  support by the European Research Council (ERC) under the European Union’s Horizon
  2020 research and innovation program (Grant Agreement No. 850899).
article_number: '491'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Stefan
  full_name: Sack, Stefan
  id: dd622248-f6e0-11ea-865d-ce382a1c81a5
  last_name: Sack
  orcid: 0000-0001-5400-8508
- first_name: Maksym
  full_name: Serbyn, Maksym
  id: 47809E7E-F248-11E8-B48F-1D18A9856A87
  last_name: Serbyn
  orcid: 0000-0002-2399-5827
citation:
  ama: Sack S, Serbyn M. Quantum annealing initialization of the quantum approximate
    optimization algorithm. <i>Quantum</i>. 2021;5. doi:<a href="https://doi.org/10.22331/Q-2021-07-01-491">10.22331/Q-2021-07-01-491</a>
  apa: Sack, S., &#38; Serbyn, M. (2021). Quantum annealing initialization of the
    quantum approximate optimization algorithm. <i>Quantum</i>. Verein zur Förderung
    des Open Access Publizierens in den Quantenwissenschaften. <a href="https://doi.org/10.22331/Q-2021-07-01-491">https://doi.org/10.22331/Q-2021-07-01-491</a>
  chicago: Sack, Stefan, and Maksym Serbyn. “Quantum Annealing Initialization of the
    Quantum Approximate Optimization Algorithm.” <i>Quantum</i>. Verein zur Förderung
    des Open Access Publizierens in den Quantenwissenschaften, 2021. <a href="https://doi.org/10.22331/Q-2021-07-01-491">https://doi.org/10.22331/Q-2021-07-01-491</a>.
  ieee: S. Sack and M. Serbyn, “Quantum annealing initialization of the quantum approximate
    optimization algorithm,” <i>Quantum</i>, vol. 5. Verein zur Förderung des Open
    Access Publizierens in den Quantenwissenschaften, 2021.
  ista: Sack S, Serbyn M. 2021. Quantum annealing initialization of the quantum approximate
    optimization algorithm. Quantum. 5, 491.
  mla: Sack, Stefan, and Maksym Serbyn. “Quantum Annealing Initialization of the Quantum
    Approximate Optimization Algorithm.” <i>Quantum</i>, vol. 5, 491, Verein zur Förderung
    des Open Access Publizierens in den Quantenwissenschaften, 2021, doi:<a href="https://doi.org/10.22331/Q-2021-07-01-491">10.22331/Q-2021-07-01-491</a>.
  short: S. Sack, M. Serbyn, Quantum 5 (2021).
corr_author: '1'
date_created: 2021-08-01T22:01:21Z
date_published: 2021-07-01T00:00:00Z
date_updated: 2026-08-12T22:31:05Z
day: '01'
ddc:
- '530'
department:
- _id: GradSch
- _id: MaSe
doi: 10.22331/Q-2021-07-01-491
ec_funded: 1
external_id:
  arxiv:
  - '2101.05742'
  isi:
  - '000669830600001'
file:
- access_level: open_access
  checksum: 9706c2bb8e748e9b5b138381995a7f6f
  content_type: application/pdf
  creator: cchlebak
  date_created: 2021-08-06T06:44:31Z
  date_updated: 2021-08-06T06:44:31Z
  file_id: '9774'
  file_name: 2021_Quantum_Sack.pdf
  file_size: 2312482
  relation: main_file
file_date_updated: 2021-08-06T06:44:31Z
has_accepted_license: '1'
intvolume: '         5'
isi: 1
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: 23841C26-32DE-11EA-91FC-C7463DDC885E
  call_identifier: H2020
  grant_number: '850899'
  name: 'Non-Ergodic Quantum Matter: Universality, Dynamics and Control'
publication: Quantum
publication_identifier:
  eissn:
  - 2521-327X
publication_status: published
publisher: Verein zur Förderung des Open Access Publizierens in den Quantenwissenschaften
quality_controlled: '1'
related_material:
  record:
  - id: '14622'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Quantum annealing initialization of the quantum approximate optimization algorithm
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 5
year: '2021'
...
