[{"status":"public","has_accepted_license":"1","acknowledgement":"Open Access is funded by the Austrian Science Fund (FWF). We thank Generalitat de Catalunya AGAUR─2021 SGR 01581 for financial support. B.F.N., K.X., and L.L.Y. thank the China Scholarship Council (CSC) for the scholarship support. C.C. acknowledges funding from the FWF “Lise Meitner Fellowship” grant agreement M 2889-N. J.S.L is grateful to the Science and Technology Department of Sichuan Province for the project no. 22NSFSC0966. K.H.L. was supported by the Institute of Zhejiang University-Quzhou (IZQ2021RCZX003). M.I. acknowledges the financial support from IST Austria.","issue":"19","isi":1,"doi":"10.1021/acsami.3c00625","intvolume":"        15","author":[{"last_name":"Nan","first_name":"Bingfei","full_name":"Nan, Bingfei"},{"last_name":"Song","full_name":"Song, Xuan","first_name":"Xuan"},{"last_name":"Chang","first_name":"Cheng","id":"9E331C2E-9F27-11E9-AE48-5033E6697425","orcid":"0000-0002-9515-4277","full_name":"Chang, Cheng"},{"first_name":"Ke","full_name":"Xiao, Ke","last_name":"Xiao"},{"last_name":"Zhang","first_name":"Yu","full_name":"Zhang, Yu"},{"first_name":"Linlin","full_name":"Yang, Linlin","last_name":"Yang"},{"last_name":"Horta","id":"03a7e858-01b1-11ec-8b71-99ae6c4a05bc","first_name":"Sharona","full_name":"Horta, Sharona"},{"last_name":"Li","full_name":"Li, Junshan","first_name":"Junshan"},{"full_name":"Lim, Khak Ho","first_name":"Khak Ho","last_name":"Lim"},{"id":"43C61214-F248-11E8-B48F-1D18A9856A87","first_name":"Maria","full_name":"Ibáñez, Maria","orcid":"0000-0001-5013-2843","last_name":"Ibáñez"},{"last_name":"Cabot","first_name":"Andreu","full_name":"Cabot, Andreu"}],"publication_status":"published","type":"journal_article","pmid":1,"quality_controlled":"1","article_processing_charge":"No","project":[{"_id":"9B8804FC-BA93-11EA-9121-9846C619BF3A","grant_number":"M02889","name":"Bottom-up Engineering for Thermoelectric Applications"}],"citation":{"mla":"Nan, Bingfei, et al. “Bottom-up Synthesis of SnTe-Based Thermoelectric Composites.” <i>ACS Applied Materials and Interfaces</i>, vol. 15, no. 19, American Chemical Society, 2023, pp. 23380–23389, doi:<a href=\"https://doi.org/10.1021/acsami.3c00625\">10.1021/acsami.3c00625</a>.","ista":"Nan B, Song X, Chang C, Xiao K, Zhang Y, Yang L, Horta S, Li J, Lim KH, Ibáñez M, Cabot A. 2023. Bottom-up synthesis of SnTe-based thermoelectric composites. ACS Applied Materials and Interfaces. 15(19), 23380–23389.","ieee":"B. Nan <i>et al.</i>, “Bottom-up synthesis of SnTe-based thermoelectric composites,” <i>ACS Applied Materials and Interfaces</i>, vol. 15, no. 19. American Chemical Society, pp. 23380–23389, 2023.","chicago":"Nan, Bingfei, Xuan Song, Cheng Chang, Ke Xiao, Yu Zhang, Linlin Yang, Sharona Horta, et al. “Bottom-up Synthesis of SnTe-Based Thermoelectric Composites.” <i>ACS Applied Materials and Interfaces</i>. American Chemical Society, 2023. <a href=\"https://doi.org/10.1021/acsami.3c00625\">https://doi.org/10.1021/acsami.3c00625</a>.","short":"B. Nan, X. Song, C. Chang, K. Xiao, Y. Zhang, L. Yang, S. Horta, J. Li, K.H. Lim, M. Ibáñez, A. Cabot, ACS Applied Materials and Interfaces 15 (2023) 23380–23389.","ama":"Nan B, Song X, Chang C, et al. Bottom-up synthesis of SnTe-based thermoelectric composites. <i>ACS Applied Materials and Interfaces</i>. 2023;15(19):23380–23389. doi:<a href=\"https://doi.org/10.1021/acsami.3c00625\">10.1021/acsami.3c00625</a>","apa":"Nan, B., Song, X., Chang, C., Xiao, K., Zhang, Y., Yang, L., … Cabot, A. (2023). Bottom-up synthesis of SnTe-based thermoelectric composites. <i>ACS Applied Materials and Interfaces</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acsami.3c00625\">https://doi.org/10.1021/acsami.3c00625</a>"},"department":[{"_id":"MaIb"}],"volume":15,"file_date_updated":"2023-05-30T07:38:44Z","_id":"13092","oa":1,"oa_version":"Published Version","external_id":{"isi":["000985497900001"],"pmid":["37141543"]},"publisher":"American Chemical Society","title":"Bottom-up synthesis of SnTe-based thermoelectric composites","day":"04","year":"2023","scopus_import":"1","article_type":"original","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","date_published":"2023-05-04T00:00:00Z","month":"05","page":"23380–23389","ddc":["540"],"publication":"ACS Applied Materials and Interfaces","date_updated":"2025-04-14T09:29:33Z","date_created":"2023-05-28T22:01:03Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"file":[{"file_id":"13099","success":1,"content_type":"application/pdf","file_name":"2023_ACSAppliedMaterials_Nan.pdf","creator":"dernst","checksum":"23893be46763c4c78daacddd019de821","date_created":"2023-05-30T07:38:44Z","access_level":"open_access","date_updated":"2023-05-30T07:38:44Z","file_size":5640829,"relation":"main_file"}],"publication_identifier":{"issn":["1944-8244"],"eissn":["1944-8252"]},"abstract":[{"lang":"eng","text":"There is a need for the development of lead-free thermoelectric materials for medium-/high-temperature applications. Here, we report a thiol-free tin telluride (SnTe) precursor that can be thermally decomposed to produce SnTe crystals with sizes ranging from tens to several hundreds of nanometers. We further engineer SnTe–Cu2SnTe3 nanocomposites with a homogeneous phase distribution by decomposing the liquid SnTe precursor containing a dispersion of Cu1.5Te colloidal nanoparticles. The presence of Cu within the SnTe and the segregated semimetallic Cu2SnTe3 phase effectively improves the electrical conductivity of SnTe while simultaneously reducing the lattice thermal conductivity without compromising the Seebeck coefficient. Overall, power factors up to 3.63 mW m–1 K–2 and thermoelectric figures of merit up to 1.04 are obtained at 823 K, which represent a 167% enhancement compared with pristine SnTe."}],"language":[{"iso":"eng"}],"corr_author":"1"},{"publisher":"American Chemical Society","external_id":{"pmid":["37141427"],"isi":["000985481400001"]},"volume":23,"file_date_updated":"2023-05-30T07:55:31Z","_id":"13094","oa":1,"oa_version":"Published Version","department":[{"_id":"AnSa"}],"citation":{"apa":"Azadbakht, A., Meadowcroft, B., Varkevisser, T., Šarić, A., &#38; Kraft, D. J. (2023). Wrapping pathways of anisotropic dumbbell particles by Giant Unilamellar Vesicles. <i>Nano Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acs.nanolett.3c00375\">https://doi.org/10.1021/acs.nanolett.3c00375</a>","short":"A. Azadbakht, B. Meadowcroft, T. Varkevisser, A. Šarić, D.J. Kraft, Nano Letters 23 (2023) 4267–4273.","ama":"Azadbakht A, Meadowcroft B, Varkevisser T, Šarić A, Kraft DJ. Wrapping pathways of anisotropic dumbbell particles by Giant Unilamellar Vesicles. <i>Nano Letters</i>. 2023;23(10):4267–4273. doi:<a href=\"https://doi.org/10.1021/acs.nanolett.3c00375\">10.1021/acs.nanolett.3c00375</a>","chicago":"Azadbakht, Ali, Billie Meadowcroft, Thijs Varkevisser, Anđela Šarić, and Daniela J. Kraft. “Wrapping Pathways of Anisotropic Dumbbell Particles by Giant Unilamellar Vesicles.” <i>Nano Letters</i>. American Chemical Society, 2023. <a href=\"https://doi.org/10.1021/acs.nanolett.3c00375\">https://doi.org/10.1021/acs.nanolett.3c00375</a>.","ieee":"A. Azadbakht, B. Meadowcroft, T. Varkevisser, A. Šarić, and D. J. Kraft, “Wrapping pathways of anisotropic dumbbell particles by Giant Unilamellar Vesicles,” <i>Nano Letters</i>, vol. 23, no. 10. American Chemical Society, pp. 4267–4273, 2023.","mla":"Azadbakht, Ali, et al. “Wrapping Pathways of Anisotropic Dumbbell Particles by Giant Unilamellar Vesicles.” <i>Nano Letters</i>, vol. 23, no. 10, American Chemical Society, 2023, pp. 4267–4273, doi:<a href=\"https://doi.org/10.1021/acs.nanolett.3c00375\">10.1021/acs.nanolett.3c00375</a>.","ista":"Azadbakht A, Meadowcroft B, Varkevisser T, Šarić A, Kraft DJ. 2023. Wrapping pathways of anisotropic dumbbell particles by Giant Unilamellar Vesicles. Nano Letters. 23(10), 4267–4273."},"project":[{"grant_number":"802960","_id":"eba2549b-77a9-11ec-83b8-a81e493eae4e","call_identifier":"H2020","name":"Non-Equilibrium Protein Assembly: from Building Blocks to Biological Machines"}],"article_processing_charge":"No","quality_controlled":"1","pmid":1,"author":[{"full_name":"Azadbakht, Ali","first_name":"Ali","last_name":"Azadbakht"},{"full_name":"Meadowcroft, Billie","orcid":"0000-0003-3441-1337","id":"a4725fd6-932b-11ed-81e2-c098c7f37ae1","first_name":"Billie","last_name":"Meadowcroft"},{"last_name":"Varkevisser","first_name":"Thijs","full_name":"Varkevisser, Thijs"},{"last_name":"Šarić","full_name":"Šarić, Anđela","orcid":"0000-0002-7854-2139","id":"bf63d406-f056-11eb-b41d-f263a6566d8b","first_name":"Anđela"},{"last_name":"Kraft","first_name":"Daniela J.","full_name":"Kraft, Daniela J."}],"publication_status":"published","type":"journal_article","isi":1,"intvolume":"        23","doi":"10.1021/acs.nanolett.3c00375","acknowledgement":"We sincerely thank Casper van der Wel for providing open-source packages for tracking, as well as Yogesh Shelke for his assistance with PAA coverslip preparation and Rachel Doherty for her assistance with particle functionalization. We are grateful to Felix Frey for useful discussions on the theory of membrane wrapping. B.M. and A.Š. acknowledge funding by the European Union’s Horizon 2020 research and innovation programme (ERC Starting Grant No. 802960).","issue":"10","status":"public","has_accepted_license":"1","language":[{"iso":"eng"}],"file":[{"checksum":"9734d4c617bab3578ef62916b764547a","creator":"dernst","file_name":"2023_NanoLetters_Azadbakht.pdf","content_type":"application/pdf","success":1,"file_id":"13100","date_updated":"2023-05-30T07:55:31Z","file_size":3654910,"relation":"main_file","access_level":"open_access","date_created":"2023-05-30T07:55:31Z"}],"publication_identifier":{"eissn":["1530-6992"],"issn":["1530-6984"]},"abstract":[{"lang":"eng","text":"Endocytosis is a key cellular process involved in the uptake of nutrients, pathogens, or the therapy of diseases. Most studies have focused on spherical objects, whereas biologically relevant shapes can be highly anisotropic. In this letter, we use an experimental model system based on Giant Unilamellar Vesicles (GUVs) and dumbbell-shaped colloidal particles to mimic and investigate the first stage of the passive endocytic process: engulfment of an anisotropic object by the membrane. Our model has specific ligand–receptor interactions realized by mobile receptors on the vesicles and immobile ligands on the particles. Through a series of experiments, theory, and molecular dynamics simulations, we quantify the wrapping process of anisotropic dumbbells by GUVs and identify distinct stages of the wrapping pathway. We find that the strong curvature variation in the neck of the dumbbell as well as membrane tension are crucial in determining both the speed of wrapping and the final states."}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"ddc":["540"],"page":"4267–4273","date_created":"2023-05-28T22:01:03Z","date_updated":"2025-04-14T07:59:30Z","publication":"Nano Letters","date_published":"2023-05-04T00:00:00Z","ec_funded":1,"month":"05","year":"2023","article_type":"letter_note","scopus_import":"1","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","title":"Wrapping pathways of anisotropic dumbbell particles by Giant Unilamellar Vesicles","day":"04"},{"publisher":"American Chemical Society","external_id":{"isi":["000985907400001"],"pmid":["37140345"]},"_id":"13095","oa":1,"oa_version":"Published Version","volume":145,"file_date_updated":"2023-05-30T07:05:28Z","department":[{"_id":"PaSc"}],"citation":{"apa":"Troussicot, L., Vallet, A., Molin, M., Burmann, B. M., &#38; Schanda, P. (2023). Disulfide-bond-induced structural frustration and dynamic disorder in a peroxiredoxin from MAS NMR. <i>Journal of the American Chemical Society</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/jacs.3c01200\">https://doi.org/10.1021/jacs.3c01200</a>","short":"L. Troussicot, A. Vallet, M. Molin, B.M. Burmann, P. Schanda, Journal of the American Chemical Society 145 (2023) 10700–10711.","ama":"Troussicot L, Vallet A, Molin M, Burmann BM, Schanda P. Disulfide-bond-induced structural frustration and dynamic disorder in a peroxiredoxin from MAS NMR. <i>Journal of the American Chemical Society</i>. 2023;145(19):10700–10711. doi:<a href=\"https://doi.org/10.1021/jacs.3c01200\">10.1021/jacs.3c01200</a>","chicago":"Troussicot, Laura, Alicia Vallet, Mikael Molin, Björn M. Burmann, and Paul Schanda. “Disulfide-Bond-Induced Structural Frustration and Dynamic Disorder in a Peroxiredoxin from MAS NMR.” <i>Journal of the American Chemical Society</i>. American Chemical Society, 2023. <a href=\"https://doi.org/10.1021/jacs.3c01200\">https://doi.org/10.1021/jacs.3c01200</a>.","ieee":"L. Troussicot, A. Vallet, M. Molin, B. M. Burmann, and P. Schanda, “Disulfide-bond-induced structural frustration and dynamic disorder in a peroxiredoxin from MAS NMR,” <i>Journal of the American Chemical Society</i>, vol. 145, no. 19. American Chemical Society, pp. 10700–10711, 2023.","ista":"Troussicot L, Vallet A, Molin M, Burmann BM, Schanda P. 2023. Disulfide-bond-induced structural frustration and dynamic disorder in a peroxiredoxin from MAS NMR. Journal of the American Chemical Society. 145(19), 10700–10711.","mla":"Troussicot, Laura, et al. “Disulfide-Bond-Induced Structural Frustration and Dynamic Disorder in a Peroxiredoxin from MAS NMR.” <i>Journal of the American Chemical Society</i>, vol. 145, no. 19, American Chemical Society, 2023, pp. 10700–10711, doi:<a href=\"https://doi.org/10.1021/jacs.3c01200\">10.1021/jacs.3c01200</a>."},"quality_controlled":"1","article_processing_charge":"No","pmid":1,"related_material":{"record":[{"relation":"research_data","id":"12820","status":"public"}]},"type":"journal_article","author":[{"id":"3d9cac31-413c-11eb-9514-d1ec2a7fb7f3","first_name":"Laura","full_name":"Troussicot, Laura","orcid":"0000-0001-8297-8886","last_name":"Troussicot"},{"full_name":"Vallet, Alicia","first_name":"Alicia","last_name":"Vallet"},{"full_name":"Molin, Mikael","first_name":"Mikael","last_name":"Molin"},{"last_name":"Burmann","first_name":"Björn M.","full_name":"Burmann, Björn M."},{"last_name":"Schanda","full_name":"Schanda, Paul","orcid":"0000-0002-9350-7606","first_name":"Paul","id":"7B541462-FAF6-11E9-A490-E8DFE5697425"}],"publication_status":"published","intvolume":"       145","doi":"10.1021/jacs.3c01200","isi":1,"issue":"19","has_accepted_license":"1","acknowledgement":"We thank Albert A. Smith (Univ. Leipzig) for discussions and help with detectors analyses, Undina Guillerm (IST Austria) for gel electrophoresis experiments (Figure S7), and Jens\r\nLidman (Univ. Gothenburg) for a 3Q relaxation analysis script. Intramural funding from Institute of Science and Technology Austria is acknowledged. This work also used the platforms of\r\nthe Grenoble Instruct-ERIC center (ISBG; UMS 3518 CNRSCEA-UJF-EMBL) within the Grenoble Partnership for Structural Biology (PSB), as well as the Swedish NMR Centre\r\nof the University of Gothenburg. Both platforms provided excellent research infrastructures. B.M.B. gratefully acknowledges funding from the Swedish Research Council (Starting grant 2016-04721), the Swedish Cancer Foundation (2019-0415), and the Knut och Alice Wallenberg Foundation through a Wallenberg Academy Fellowship (2016.0163) as well as through the Wallenberg Centre for Molecular and Translational Medicine, University of Gothenburg, Sweden. ","status":"public","corr_author":"1","language":[{"iso":"eng"}],"abstract":[{"text":"Disulfide bond formation is fundamentally important for protein structure and constitutes a key mechanism by which cells regulate the intracellular oxidation state. Peroxiredoxins (PRDXs) eliminate reactive oxygen species such as hydrogen peroxide through a catalytic cycle of Cys oxidation and reduction. Additionally, upon Cys oxidation PRDXs undergo extensive conformational rearrangements that may underlie their presently structurally poorly defined functions as molecular chaperones. Rearrangements include high molecular-weight oligomerization, the dynamics of which are, however, poorly understood, as is the impact of disulfide bond formation on these properties. Here we show that formation of disulfide bonds along the catalytic cycle induces extensive μs time scale dynamics, as monitored by magic-angle spinning NMR of the 216 kDa-large Tsa1 decameric assembly and solution-NMR of a designed dimeric mutant. We ascribe the conformational dynamics to structural frustration, resulting from conflicts between the disulfide-constrained reduction of mobility and the desire to fulfill other favorable contacts.","lang":"eng"}],"publication_identifier":{"eissn":["1520-5126"],"issn":["0002-7863"]},"file":[{"file_id":"13098","success":1,"content_type":"application/pdf","creator":"dernst","checksum":"0758a930ef21c62fc91b14e657479f83","file_name":"2023_JACS_Troussicot.pdf","access_level":"open_access","date_created":"2023-05-30T07:05:28Z","relation":"main_file","file_size":6719299,"date_updated":"2023-05-30T07:05:28Z"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"date_created":"2023-05-28T22:01:04Z","publication":"Journal of the American Chemical Society","date_updated":"2024-10-09T21:05:30Z","ddc":["540"],"page":"10700–10711","month":"05","date_published":"2023-05-04T00:00:00Z","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","year":"2023","article_type":"original","scopus_import":"1","day":"04","title":"Disulfide-bond-induced structural frustration and dynamic disorder in a peroxiredoxin from MAS NMR"},{"date_published":"2023-06-29T00:00:00Z","month":"06","page":"1065-1071","ddc":["570"],"publication":"Nature","date_updated":"2025-04-23T08:57:12Z","date_created":"2023-05-28T22:01:04Z","title":"Structural basis of NINJ1-mediated plasma membrane rupture in cell death","day":"29","article_type":"original","year":"2023","scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file":[{"date_created":"2023-11-14T11:48:18Z","access_level":"open_access","file_size":12292188,"date_updated":"2023-11-14T11:48:18Z","relation":"main_file","creator":"dernst","checksum":"0fab69252453bff1de7f0e2eceb76d34","file_name":"2023_Nature_Degen.pdf","success":1,"file_id":"14533","content_type":"application/pdf"}],"publication_identifier":{"eissn":["1476-4687"],"issn":["0028-0836"]},"abstract":[{"text":"Eukaryotic cells can undergo different forms of programmed cell death, many of which culminate in plasma membrane rupture as the defining terminal event1,2,3,4,5,6,7. Plasma membrane rupture was long thought to be driven by osmotic pressure, but it has recently been shown to be in many cases an active process, mediated by the protein ninjurin-18 (NINJ1). Here we resolve the structure of NINJ1 and the mechanism by which it ruptures membranes. Super-resolution microscopy reveals that NINJ1 clusters into structurally diverse assemblies in the membranes of dying cells, in particular large, filamentous assemblies with branched morphology. A cryo-electron microscopy structure of NINJ1 filaments shows a tightly packed fence-like array of transmembrane α-helices. Filament directionality and stability is defined by two amphipathic α-helices that interlink adjacent filament subunits. The NINJ1 filament features a hydrophilic side and a hydrophobic side, and molecular dynamics simulations show that it can stably cap membrane edges. The function of the resulting supramolecular arrangement was validated by site-directed mutagenesis. Our data thus suggest that, during lytic cell death, the extracellular α-helices of NINJ1 insert into the plasma membrane to polymerize NINJ1 monomers into amphipathic filaments that rupture the plasma membrane. The membrane protein NINJ1 is therefore an interactive component of the eukaryotic cell membrane that functions as an in-built breaking point in response to activation of cell death.","lang":"eng"}],"language":[{"iso":"eng"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"publication_status":"published","author":[{"last_name":"Degen","first_name":"Morris","full_name":"Degen, Morris"},{"last_name":"Santos","full_name":"Santos, José Carlos","first_name":"José Carlos"},{"full_name":"Pluhackova, Kristyna","first_name":"Kristyna","last_name":"Pluhackova"},{"last_name":"Cebrero","first_name":"Gonzalo","full_name":"Cebrero, Gonzalo"},{"full_name":"Ramos, Saray","first_name":"Saray","last_name":"Ramos"},{"first_name":"Gytis","full_name":"Jankevicius, Gytis","last_name":"Jankevicius"},{"full_name":"Hartenian, Ella","first_name":"Ella","last_name":"Hartenian"},{"last_name":"Guillerm","first_name":"Undina","id":"bb74f472-ae54-11eb-9835-bc9c22fb1183","full_name":"Guillerm, Undina"},{"full_name":"Mari, Stefania A.","first_name":"Stefania A.","last_name":"Mari"},{"first_name":"Bastian","full_name":"Kohl, Bastian","last_name":"Kohl"},{"last_name":"Müller","first_name":"Daniel J.","full_name":"Müller, Daniel J."},{"last_name":"Schanda","full_name":"Schanda, Paul","orcid":"0000-0002-9350-7606","first_name":"Paul","id":"7B541462-FAF6-11E9-A490-E8DFE5697425"},{"last_name":"Maier","full_name":"Maier, Timm","first_name":"Timm"},{"full_name":"Perez, Camilo","first_name":"Camilo","last_name":"Perez"},{"first_name":"Christian","full_name":"Sieben, Christian","last_name":"Sieben"},{"full_name":"Broz, Petr","first_name":"Petr","last_name":"Broz"},{"first_name":"Sebastian","full_name":"Hiller, Sebastian","last_name":"Hiller"}],"type":"journal_article","pmid":1,"article_processing_charge":"Yes (via OA deal)","quality_controlled":"1","status":"public","has_accepted_license":"1","acknowledgement":"This work was supported by the Deutsche Forschungsgemeinschaft under Germany’s Excellence Strategy EXC 2075–390740016 and the Stuttgart Center for Simulation Science (SC SimTech) to K.P., by ERC-CoG 770988 (InflamCellDeath) and SNF Project funding (310030B_198005, 310030B_192523) to P.B., by the Swiss Nanoscience Institute and the Swiss National Science Foundation via the NCCR AntiResist (180541) to S.H. and the NCCR Molecular Systems Engineering (51NF40-205608) to D.J.M., by the Helmholtz Young Investigator Program of the Helmholtz Association to C.S., by the SNF Professorship funding (PP00P3_198903) to C.P., EMBO postdoctoral fellowship ALTF 27-2022 to E.H. and by the Scientific Service Units of IST Austria through resources provided by the NMR and Life Science Facilities to P.S. Molecular dynamics simulations were performed on the HoreKa supercomputer funded by the Ministry of Science, Research and the Arts Baden-Württemberg and by the Federal Ministry of Education and Research. The authors thank the BioEM Lab of the Biozentrum, University of Basel for support; V. Mack, K. Shkarina and J. Fricke for technical support; D. Ricklin and S. Vogt for peptide synthesis; P. Pelczar for support with animals; S.-J. Marrink and P. Telles de Souza for supply with Martini3 parameters and scripts; and P. Radler und M. Loose for help with QCM. Fig. 4g and Extended Data Fig. 1a were in part created with BioRender.com.\r\nOpen access funding provided by University of Basel.","isi":1,"doi":"10.1038/s41586-023-05991-z","intvolume":"       618","external_id":{"pmid":["37198476"],"isi":["000991386800011"]},"publisher":"Springer Nature","acknowledged_ssus":[{"_id":"NMR"},{"_id":"LifeSc"}],"citation":{"ama":"Degen M, Santos JC, Pluhackova K, et al. Structural basis of NINJ1-mediated plasma membrane rupture in cell death. <i>Nature</i>. 2023;618:1065-1071. doi:<a href=\"https://doi.org/10.1038/s41586-023-05991-z\">10.1038/s41586-023-05991-z</a>","short":"M. Degen, J.C. Santos, K. Pluhackova, G. Cebrero, S. Ramos, G. Jankevicius, E. Hartenian, U. Guillerm, S.A. Mari, B. Kohl, D.J. Müller, P. Schanda, T. Maier, C. Perez, C. Sieben, P. Broz, S. Hiller, Nature 618 (2023) 1065–1071.","apa":"Degen, M., Santos, J. C., Pluhackova, K., Cebrero, G., Ramos, S., Jankevicius, G., … Hiller, S. (2023). Structural basis of NINJ1-mediated plasma membrane rupture in cell death. <i>Nature</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41586-023-05991-z\">https://doi.org/10.1038/s41586-023-05991-z</a>","chicago":"Degen, Morris, José Carlos Santos, Kristyna Pluhackova, Gonzalo Cebrero, Saray Ramos, Gytis Jankevicius, Ella Hartenian, et al. “Structural Basis of NINJ1-Mediated Plasma Membrane Rupture in Cell Death.” <i>Nature</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1038/s41586-023-05991-z\">https://doi.org/10.1038/s41586-023-05991-z</a>.","ieee":"M. Degen <i>et al.</i>, “Structural basis of NINJ1-mediated plasma membrane rupture in cell death,” <i>Nature</i>, vol. 618. Springer Nature, pp. 1065–1071, 2023.","mla":"Degen, Morris, et al. “Structural Basis of NINJ1-Mediated Plasma Membrane Rupture in Cell Death.” <i>Nature</i>, vol. 618, Springer Nature, 2023, pp. 1065–71, doi:<a href=\"https://doi.org/10.1038/s41586-023-05991-z\">10.1038/s41586-023-05991-z</a>.","ista":"Degen M, Santos JC, Pluhackova K, Cebrero G, Ramos S, Jankevicius G, Hartenian E, Guillerm U, Mari SA, Kohl B, Müller DJ, Schanda P, Maier T, Perez C, Sieben C, Broz P, Hiller S. 2023. Structural basis of NINJ1-mediated plasma membrane rupture in cell death. Nature. 618, 1065–1071."},"department":[{"_id":"PaSc"}],"volume":618,"file_date_updated":"2023-11-14T11:48:18Z","oa_version":"Published Version","_id":"13096","oa":1},{"year":"2023","article_type":"original","scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","title":"Melting curve of superionic ammonia at planetary interior conditions","day":"01","page":"1280-1285","date_updated":"2024-08-20T05:59:32Z","publication":"Nature Physics","date_created":"2023-06-04T22:01:02Z","date_published":"2023-09-01T00:00:00Z","month":"09","language":[{"iso":"eng"}],"publication_identifier":{"eissn":["1745-2481"],"issn":["1745-2473"]},"abstract":[{"lang":"eng","text":"Under high pressures and temperatures, molecular systems with substantial polarization charges, such as ammonia and water, are predicted to form superionic phases and dense fluid states with dissociating molecules and high electrical conductivity. This behaviour potentially plays a role in explaining the origin of the multipolar magnetic fields of Uranus and Neptune, whose mantles are thought to result from a mixture of H2O, NH3 and CH4 ices. Determining the stability domain, melting curve and electrical conductivity of these superionic phases is therefore crucial for modelling planetary interiors and dynamos. Here we report the melting curve of superionic ammonia up to 300 GPa from laser-driven shock compression of pre-compressed samples and atomistic calculations. We show that ammonia melts at lower temperatures than water above 100 GPa and that fluid ammonia’s electrical conductivity exceeds that of water at conditions predicted by hot, super-adiabatic models for Uranus and Neptune, and enhances the conductivity in their fluid water-rich dynamo layers."}],"isi":1,"doi":"10.1038/s41567-023-02074-8","intvolume":"        19","status":"public","acknowledgement":"We acknowledge the crucial contribution of the LULI2000 laser and support teams to the success of the experiments. We also thank S. Brygoo and P. Loubeyre for useful discussions. This research was supported by the French National Research Agency (ANR) through the projects POMPEI (grant no. ANR-16-CE31-0008) and SUPER-ICES (grant ANR-15-CE30-008-01), and by the PLAS@PAR Federation. M.F. and R.R. gratefully acknowledge support by the DFG within the Research Unit FOR 2440. M.B. was supported by the European Union within the Marie Skłodowska-Curie actions (xICE grant 894725) and the NOMIS foundation. The DFT-MD calculations were performed at the North-German Supercomputing Alliance facilities.","related_material":{"link":[{"url":"https://doi.org/10.1038/s41567-023-02130-3","relation":"erratum"}]},"quality_controlled":"1","article_processing_charge":"No","author":[{"last_name":"Hernandez","full_name":"Hernandez, J.-A.","first_name":"J.-A."},{"full_name":"Bethkenhagen, Mandy","orcid":"0000-0002-1838-2129","first_name":"Mandy","id":"201939f4-803f-11ed-ab7e-d8da4bd1517f","last_name":"Bethkenhagen"},{"last_name":"Ninet","first_name":"S.","full_name":"Ninet, S."},{"last_name":"French","full_name":"French, M.","first_name":"M."},{"first_name":"A.","full_name":"Benuzzi-Mounaix, A.","last_name":"Benuzzi-Mounaix"},{"full_name":"Datchi, F.","first_name":"F.","last_name":"Datchi"},{"last_name":"Guarguaglini","first_name":"M.","full_name":"Guarguaglini, M."},{"last_name":"Lefevre","first_name":"F.","full_name":"Lefevre, F."},{"last_name":"Occelli","first_name":"F.","full_name":"Occelli, F."},{"first_name":"R.","full_name":"Redmer, R.","last_name":"Redmer"},{"last_name":"Vinci","first_name":"T.","full_name":"Vinci, T."},{"full_name":"Ravasio, A.","first_name":"A.","last_name":"Ravasio"}],"publication_status":"published","type":"journal_article","volume":19,"oa_version":"None","_id":"13118","citation":{"ieee":"J.-A. Hernandez <i>et al.</i>, “Melting curve of superionic ammonia at planetary interior conditions,” <i>Nature Physics</i>, vol. 19. Springer Nature, pp. 1280–1285, 2023.","mla":"Hernandez, J. A., et al. “Melting Curve of Superionic Ammonia at Planetary Interior Conditions.” <i>Nature Physics</i>, vol. 19, Springer Nature, 2023, pp. 1280–85, doi:<a href=\"https://doi.org/10.1038/s41567-023-02074-8\">10.1038/s41567-023-02074-8</a>.","ista":"Hernandez J-A, Bethkenhagen M, Ninet S, French M, Benuzzi-Mounaix A, Datchi F, Guarguaglini M, Lefevre F, Occelli F, Redmer R, Vinci T, Ravasio A. 2023. Melting curve of superionic ammonia at planetary interior conditions. Nature Physics. 19, 1280–1285.","short":"J.-A. Hernandez, M. Bethkenhagen, S. Ninet, M. French, A. Benuzzi-Mounaix, F. Datchi, M. Guarguaglini, F. Lefevre, F. Occelli, R. Redmer, T. Vinci, A. Ravasio, Nature Physics 19 (2023) 1280–1285.","ama":"Hernandez J-A, Bethkenhagen M, Ninet S, et al. Melting curve of superionic ammonia at planetary interior conditions. <i>Nature Physics</i>. 2023;19:1280-1285. doi:<a href=\"https://doi.org/10.1038/s41567-023-02074-8\">10.1038/s41567-023-02074-8</a>","apa":"Hernandez, J.-A., Bethkenhagen, M., Ninet, S., French, M., Benuzzi-Mounaix, A., Datchi, F., … Ravasio, A. (2023). Melting curve of superionic ammonia at planetary interior conditions. <i>Nature Physics</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41567-023-02074-8\">https://doi.org/10.1038/s41567-023-02074-8</a>","chicago":"Hernandez, J.-A., Mandy Bethkenhagen, S. Ninet, M. French, A. Benuzzi-Mounaix, F. Datchi, M. Guarguaglini, et al. “Melting Curve of Superionic Ammonia at Planetary Interior Conditions.” <i>Nature Physics</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1038/s41567-023-02074-8\">https://doi.org/10.1038/s41567-023-02074-8</a>."},"department":[{"_id":"BiCh"}],"external_id":{"isi":["000996921200001"]},"publisher":"Springer Nature"},{"isi":1,"doi":"10.1038/s41586-023-06018-3","intvolume":"       618","status":"public","has_accepted_license":"1","acknowledgement":"Open access funding provided by EPFL Lausanne.We acknowledge discussions with T. Donner and T. Esslinger. We thank G. del Pace and T. Bühler for their assistance in the final stages of the experiment. We acknowledge funding from the European Research Council under the European Union Horizon 2020 Research and Innovation Programme (Grant no. 714309) and the Swiss National Science Foundation (Grant no. 184654). F.M. acknowledges financial support from the Austrian Science Fund (Stand-Alone Project P 35891-N).","pmid":1,"quality_controlled":"1","article_processing_charge":"Yes (via OA deal)","publication_status":"published","author":[{"last_name":"Helson","full_name":"Helson, Victor","first_name":"Victor"},{"last_name":"Zwettler","full_name":"Zwettler, Timo","first_name":"Timo"},{"last_name":"Mivehvar","full_name":"Mivehvar, Farokh","first_name":"Farokh"},{"first_name":"Elvia","full_name":"Colella, Elvia","last_name":"Colella"},{"id":"53f93ea2-803f-11ed-ab7e-b283135794ef","first_name":"Kevin Etienne Robert","full_name":"Roux, Kevin Etienne Robert","last_name":"Roux"},{"last_name":"Konishi","full_name":"Konishi, Hideki","first_name":"Hideki"},{"first_name":"Helmut","full_name":"Ritsch, Helmut","last_name":"Ritsch"},{"first_name":"Jean Philippe","full_name":"Brantut, Jean Philippe","last_name":"Brantut"}],"type":"journal_article","volume":618,"file_date_updated":"2023-11-14T13:00:19Z","oa_version":"Published Version","_id":"13119","oa":1,"department":[{"_id":"GeKa"}],"citation":{"ista":"Helson V, Zwettler T, Mivehvar F, Colella E, Roux KER, Konishi H, Ritsch H, Brantut JP. 2023. Density-wave ordering in a unitary Fermi gas with photon-mediated interactions. Nature. 618, 716–720.","mla":"Helson, Victor, et al. “Density-Wave Ordering in a Unitary Fermi Gas with Photon-Mediated Interactions.” <i>Nature</i>, vol. 618, Springer Nature, 2023, pp. 716–20, doi:<a href=\"https://doi.org/10.1038/s41586-023-06018-3\">10.1038/s41586-023-06018-3</a>.","ieee":"V. Helson <i>et al.</i>, “Density-wave ordering in a unitary Fermi gas with photon-mediated interactions,” <i>Nature</i>, vol. 618. Springer Nature, pp. 716–720, 2023.","chicago":"Helson, Victor, Timo Zwettler, Farokh Mivehvar, Elvia Colella, Kevin Etienne Robert Roux, Hideki Konishi, Helmut Ritsch, and Jean Philippe Brantut. “Density-Wave Ordering in a Unitary Fermi Gas with Photon-Mediated Interactions.” <i>Nature</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1038/s41586-023-06018-3\">https://doi.org/10.1038/s41586-023-06018-3</a>.","short":"V. Helson, T. Zwettler, F. Mivehvar, E. Colella, K.E.R. Roux, H. Konishi, H. Ritsch, J.P. Brantut, Nature 618 (2023) 716–720.","ama":"Helson V, Zwettler T, Mivehvar F, et al. Density-wave ordering in a unitary Fermi gas with photon-mediated interactions. <i>Nature</i>. 2023;618:716-720. doi:<a href=\"https://doi.org/10.1038/s41586-023-06018-3\">10.1038/s41586-023-06018-3</a>","apa":"Helson, V., Zwettler, T., Mivehvar, F., Colella, E., Roux, K. E. R., Konishi, H., … Brantut, J. P. (2023). Density-wave ordering in a unitary Fermi gas with photon-mediated interactions. <i>Nature</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41586-023-06018-3\">https://doi.org/10.1038/s41586-023-06018-3</a>"},"external_id":{"pmid":["37225993"],"isi":["001001139300008"]},"publisher":"Springer Nature","scopus_import":"1","article_type":"original","year":"2023","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","title":"Density-wave ordering in a unitary Fermi gas with photon-mediated interactions","day":"22","page":"716-720","ddc":["530"],"publication":"Nature","date_updated":"2025-04-23T08:58:21Z","date_created":"2023-06-04T22:01:03Z","date_published":"2023-06-22T00:00:00Z","month":"06","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"language":[{"iso":"eng"}],"file":[{"creator":"dernst","checksum":"4887a296e3b6f54e8c0b946cbfd24f49","file_name":"2023_Nature_Helson.pdf","file_id":"14534","success":1,"content_type":"application/pdf","access_level":"open_access","date_created":"2023-11-14T13:00:19Z","file_size":8156497,"relation":"main_file","date_updated":"2023-11-14T13:00:19Z"}],"abstract":[{"text":"A density wave (DW) is a fundamental type of long-range order in quantum matter tied to self-organization into a crystalline structure. The interplay of DW order with superfluidity can lead to complex scenarios that pose a great challenge to theoretical analysis. In the past decades, tunable quantum Fermi gases have served as model systems for exploring the physics of strongly interacting fermions, including most notably magnetic ordering1, pairing and superfluidity2, and the crossover from a Bardeen–Cooper–Schrieffer superfluid to a Bose–Einstein condensate3. Here, we realize a Fermi gas featuring both strong, tunable contact interactions and photon-mediated, spatially structured long-range interactions in a transversely driven high-finesse optical cavity. Above a critical long-range interaction strength, DW order is stabilized in the system, which we identify via its superradiant light-scattering properties. We quantitatively measure the variation of the onset of DW order as the contact interaction is varied across the Bardeen–Cooper–Schrieffer superfluid and Bose–Einstein condensate crossover, in qualitative agreement with a mean-field theory. The atomic DW susceptibility varies over an order of magnitude upon tuning the strength and the sign of the long-range interactions below the self-ordering threshold, demonstrating independent and simultaneous control over the contact and long-range interactions. Therefore, our experimental setup provides a fully tunable and microscopically controllable platform for the experimental study of the interplay of superfluidity and DW order.","lang":"eng"}],"publication_identifier":{"eissn":["1476-4687"],"issn":["0028-0836"]}},{"acknowledged_ssus":[{"_id":"LifeSc"}],"publisher":"Springer Nature","external_id":{"isi":["001002562700005"],"pmid":["37270641"]},"oa":1,"_id":"13127","oa_version":"Published Version","file_date_updated":"2023-06-13T08:05:46Z","volume":14,"citation":{"short":"B.E. Casillas Perez, K. Bodova, A.V. Grasse, G. Tkačik, S. Cremer, Nature Communications 14 (2023).","apa":"Casillas Perez, B. E., Bodova, K., Grasse, A. V., Tkačik, G., &#38; Cremer, S. (2023). Dynamic pathogen detection and social feedback shape collective hygiene in ants. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-023-38947-y\">https://doi.org/10.1038/s41467-023-38947-y</a>","ama":"Casillas Perez BE, Bodova K, Grasse AV, Tkačik G, Cremer S. Dynamic pathogen detection and social feedback shape collective hygiene in ants. <i>Nature Communications</i>. 2023;14. doi:<a href=\"https://doi.org/10.1038/s41467-023-38947-y\">10.1038/s41467-023-38947-y</a>","chicago":"Casillas Perez, Barbara E, Katarina Bodova, Anna V Grasse, Gašper Tkačik, and Sylvia Cremer. “Dynamic Pathogen Detection and Social Feedback Shape Collective Hygiene in Ants.” <i>Nature Communications</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1038/s41467-023-38947-y\">https://doi.org/10.1038/s41467-023-38947-y</a>.","ieee":"B. E. Casillas Perez, K. Bodova, A. V. Grasse, G. Tkačik, and S. Cremer, “Dynamic pathogen detection and social feedback shape collective hygiene in ants,” <i>Nature Communications</i>, vol. 14. Springer Nature, 2023.","mla":"Casillas Perez, Barbara E., et al. “Dynamic Pathogen Detection and Social Feedback Shape Collective Hygiene in Ants.” <i>Nature Communications</i>, vol. 14, 3232, Springer Nature, 2023, doi:<a href=\"https://doi.org/10.1038/s41467-023-38947-y\">10.1038/s41467-023-38947-y</a>.","ista":"Casillas Perez BE, Bodova K, Grasse AV, Tkačik G, Cremer S. 2023. Dynamic pathogen detection and social feedback shape collective hygiene in ants. Nature Communications. 14, 3232."},"department":[{"_id":"SyCr"},{"_id":"GaTk"}],"project":[{"name":"Epidemics in ant societies on a chip","call_identifier":"H2020","grant_number":"771402","_id":"2649B4DE-B435-11E9-9278-68D0E5697425"},{"name":"Information processing and computation in fish groups","grant_number":"RGP0065/2012","_id":"255008E4-B435-11E9-9278-68D0E5697425"}],"quality_controlled":"1","article_processing_charge":"Yes","pmid":1,"related_material":{"record":[{"status":"public","id":"12945","relation":"research_data"}]},"article_number":"3232","type":"journal_article","publication_status":"published","author":[{"full_name":"Casillas Perez, Barbara E","first_name":"Barbara E","id":"351ED2AA-F248-11E8-B48F-1D18A9856A87","last_name":"Casillas Perez"},{"last_name":"Bod'Ová","first_name":"Katarína","id":"2BA24EA0-F248-11E8-B48F-1D18A9856A87","full_name":"Bod'Ová, Katarína","orcid":"0000-0002-7214-0171"},{"last_name":"Grasse","first_name":"Anna V","id":"406F989C-F248-11E8-B48F-1D18A9856A87","full_name":"Grasse, Anna V"},{"last_name":"Tkačik","id":"3D494DCA-F248-11E8-B48F-1D18A9856A87","first_name":"Gašper","orcid":"0000-0002-6699-1455","full_name":"Tkačik, Gašper"},{"first_name":"Sylvia","id":"2F64EC8C-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-2193-3868","full_name":"Cremer, Sylvia","last_name":"Cremer"}],"intvolume":"        14","doi":"10.1038/s41467-023-38947-y","isi":1,"acknowledgement":"We thank Mike Bidochka for the fungal strains, the ISTA Social Immunity Team for ant collection, Hanna Leitner for experimental and molecular support, Jennifer Robb and Lukas Lindorfer for microscopy, and the LabSupport Facility at ISTA for general laboratory support. We further thank Victor Mireles, Iain Couzin, Fabian Theis and the Social Immunity Team for continued feedback throughout, and Michael Sixt, Yuko Ulrich, Koos Boomsma, Erika Dawson, Megan Kutzer and Hinrich Schulenburg for comments on the manuscript. This project has received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation program (Grant No. 771402; EPIDEMICSonCHIP) to SC, from the Scientific Grant Agency of the Slovak Republic (Grant No. 1/0521/20) to KB, and the Human Frontier Science Program (Grant No. RGP0065/2012) to GT.","status":"public","has_accepted_license":"1","corr_author":"1","language":[{"iso":"eng"}],"publication_identifier":{"eissn":["2041-1723"]},"abstract":[{"text":"Cooperative disease defense emerges as group-level collective behavior, yet how group members make the underlying individual decisions is poorly understood. Using garden ants and fungal pathogens as an experimental model, we derive the rules governing individual ant grooming choices and show how they produce colony-level hygiene. Time-resolved behavioral analysis, pathogen quantification, and probabilistic modeling reveal that ants increase grooming and preferentially target highly-infectious individuals when perceiving high pathogen load, but transiently suppress grooming after having been groomed by nestmates. Ants thus react to both, the infectivity of others and the social feedback they receive on their own contagiousness. While inferred solely from momentary ant decisions, these behavioral rules quantitatively predict hour-long experimental dynamics, and synergistically combine into efficient colony-wide pathogen removal. Our analyses show that noisy individual decisions based on only local, incomplete, yet dynamically-updated information on pathogen threat and social feedback can lead to potent collective disease defense.","lang":"eng"}],"file":[{"content_type":"application/pdf","success":1,"file_id":"13132","checksum":"4af0393e3ed47b3fc46e68b81c3c1007","creator":"dernst","file_name":"2023_NatureComm_CasillasPerez.pdf","relation":"main_file","date_updated":"2023-06-13T08:05:46Z","file_size":2358167,"date_created":"2023-06-13T08:05:46Z","access_level":"open_access"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"date_created":"2023-06-11T22:00:40Z","publication":"Nature Communications","date_updated":"2025-04-14T07:47:53Z","ddc":["570"],"ec_funded":1,"month":"06","date_published":"2023-06-03T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","year":"2023","article_type":"original","scopus_import":"1","day":"03","title":"Dynamic pathogen detection and social feedback shape collective hygiene in ants"},{"publication_identifier":{"issn":["0031-3203"]},"abstract":[{"text":"We propose a characterization of discrete analytical spheres, planes and lines in the body-centered cubic (BCC) grid, both in the Cartesian and in the recently proposed alternative compact coordinate system, in which each integer triplet addresses some voxel in the grid. We define spheres and planes through double Diophantine inequalities and investigate their relevant topological features, such as functionality or the interrelation between the thickness of the objects and their connectivity and separation properties. We define lines as the intersection of planes. The number of the planes (up to six) is equal to the number of the pairs of faces of a BCC voxel that are parallel to the line.","lang":"eng"}],"language":[{"iso":"eng"}],"corr_author":"1","date_published":"2023-10-01T00:00:00Z","month":"10","date_updated":"2025-04-15T07:45:32Z","publication":"Pattern Recognition","date_created":"2023-06-18T22:00:45Z","title":"Discrete analytical objects in the body-centered cubic grid","day":"01","year":"2023","article_type":"original","scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","external_id":{"isi":["001013526000001"]},"publisher":"Elsevier","project":[{"name":"Persistence and stability of geometric complexes","call_identifier":"FWF","grant_number":"I02979-N35","_id":"2561EBF4-B435-11E9-9278-68D0E5697425"},{"grant_number":"I4887","_id":"0aa4bc98-070f-11eb-9043-e6fff9c6a316","name":"Persistent Homology, Algorithms and Stochastic Geometry"}],"department":[{"_id":"HeEd"}],"citation":{"chicago":"Čomić, Lidija, Gaëlle Largeteau-Skapin, Rita Zrour, Ranita Biswas, and Eric Andres. “Discrete Analytical Objects in the Body-Centered Cubic Grid.” <i>Pattern Recognition</i>. Elsevier, 2023. <a href=\"https://doi.org/10.1016/j.patcog.2023.109693\">https://doi.org/10.1016/j.patcog.2023.109693</a>.","short":"L. Čomić, G. Largeteau-Skapin, R. Zrour, R. Biswas, E. Andres, Pattern Recognition 142 (2023).","apa":"Čomić, L., Largeteau-Skapin, G., Zrour, R., Biswas, R., &#38; Andres, E. (2023). Discrete analytical objects in the body-centered cubic grid. <i>Pattern Recognition</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.patcog.2023.109693\">https://doi.org/10.1016/j.patcog.2023.109693</a>","ama":"Čomić L, Largeteau-Skapin G, Zrour R, Biswas R, Andres E. Discrete analytical objects in the body-centered cubic grid. <i>Pattern Recognition</i>. 2023;142(10). doi:<a href=\"https://doi.org/10.1016/j.patcog.2023.109693\">10.1016/j.patcog.2023.109693</a>","mla":"Čomić, Lidija, et al. “Discrete Analytical Objects in the Body-Centered Cubic Grid.” <i>Pattern Recognition</i>, vol. 142, no. 10, 109693, Elsevier, 2023, doi:<a href=\"https://doi.org/10.1016/j.patcog.2023.109693\">10.1016/j.patcog.2023.109693</a>.","ista":"Čomić L, Largeteau-Skapin G, Zrour R, Biswas R, Andres E. 2023. Discrete analytical objects in the body-centered cubic grid. Pattern Recognition. 142(10), 109693.","ieee":"L. Čomić, G. Largeteau-Skapin, R. Zrour, R. Biswas, and E. Andres, “Discrete analytical objects in the body-centered cubic grid,” <i>Pattern Recognition</i>, vol. 142, no. 10. Elsevier, 2023."},"volume":142,"_id":"13134","oa_version":"None","author":[{"last_name":"Čomić","first_name":"Lidija","full_name":"Čomić, Lidija"},{"first_name":"Gaëlle","full_name":"Largeteau-Skapin, Gaëlle","last_name":"Largeteau-Skapin"},{"last_name":"Zrour","full_name":"Zrour, Rita","first_name":"Rita"},{"last_name":"Biswas","full_name":"Biswas, Ranita","orcid":"0000-0002-5372-7890","first_name":"Ranita","id":"3C2B033E-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Andres","first_name":"Eric","full_name":"Andres, Eric"}],"publication_status":"published","type":"journal_article","article_number":"109693","article_processing_charge":"No","quality_controlled":"1","issue":"10","acknowledgement":"The first author has been partially supported by the Ministry of Science, Technological Development and Innovation of the Republic of Serbia through the project no. 451-03-47/2023-01/200156. The fourth author is funded by the DFG Collaborative Research Center TRR 109, ‘Discretization in Geometry and Dynamics’, Austrian Science Fund (FWF), grant no. I 02979-N35.","status":"public","isi":1,"doi":"10.1016/j.patcog.2023.109693","intvolume":"       142"},{"external_id":{"isi":["001019018700001"]},"publisher":"Elsevier","volume":368,"file_date_updated":"2024-01-29T11:03:09Z","_id":"13135","oa":1,"oa_version":"Published Version","project":[{"grant_number":"948819","_id":"0aa76401-070f-11eb-9043-b5bb049fa26d","call_identifier":"H2020","name":"Bridging Scales in Random Materials"}],"citation":{"chicago":"Agresti, Antonio, and Mark Veraar. “Reaction-Diffusion Equations with Transport Noise and Critical Superlinear Diffusion: Local Well-Posedness and Positivity.” <i>Journal of Differential Equations</i>. Elsevier, 2023. <a href=\"https://doi.org/10.1016/j.jde.2023.05.038\">https://doi.org/10.1016/j.jde.2023.05.038</a>.","ama":"Agresti A, Veraar M. Reaction-diffusion equations with transport noise and critical superlinear diffusion: Local well-posedness and positivity. <i>Journal of Differential Equations</i>. 2023;368(9):247-300. doi:<a href=\"https://doi.org/10.1016/j.jde.2023.05.038\">10.1016/j.jde.2023.05.038</a>","apa":"Agresti, A., &#38; Veraar, M. (2023). Reaction-diffusion equations with transport noise and critical superlinear diffusion: Local well-posedness and positivity. <i>Journal of Differential Equations</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jde.2023.05.038\">https://doi.org/10.1016/j.jde.2023.05.038</a>","short":"A. Agresti, M. Veraar, Journal of Differential Equations 368 (2023) 247–300.","ista":"Agresti A, Veraar M. 2023. Reaction-diffusion equations with transport noise and critical superlinear diffusion: Local well-posedness and positivity. Journal of Differential Equations. 368(9), 247–300.","mla":"Agresti, Antonio, and Mark Veraar. “Reaction-Diffusion Equations with Transport Noise and Critical Superlinear Diffusion: Local Well-Posedness and Positivity.” <i>Journal of Differential Equations</i>, vol. 368, no. 9, Elsevier, 2023, pp. 247–300, doi:<a href=\"https://doi.org/10.1016/j.jde.2023.05.038\">10.1016/j.jde.2023.05.038</a>.","ieee":"A. Agresti and M. Veraar, “Reaction-diffusion equations with transport noise and critical superlinear diffusion: Local well-posedness and positivity,” <i>Journal of Differential Equations</i>, vol. 368, no. 9. Elsevier, pp. 247–300, 2023."},"department":[{"_id":"JuFi"}],"article_processing_charge":"Yes (in subscription journal)","quality_controlled":"1","author":[{"last_name":"Agresti","first_name":"Antonio","id":"673cd0cc-9b9a-11eb-b144-88f30e1fbb72","full_name":"Agresti, Antonio","orcid":"0000-0002-9573-2962"},{"first_name":"Mark","full_name":"Veraar, Mark","last_name":"Veraar"}],"publication_status":"published","type":"journal_article","isi":1,"doi":"10.1016/j.jde.2023.05.038","intvolume":"       368","has_accepted_license":"1","status":"public","acknowledgement":"The first author has received funding from the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation programme (grant agreement No. 948819) Image 1. The second author is supported by the VICI subsidy VI.C.212.027 of the Netherlands Organisation for Scientific Research (NWO).","issue":"9","language":[{"iso":"eng"}],"corr_author":"1","file":[{"access_level":"open_access","date_created":"2024-01-29T11:03:09Z","date_updated":"2024-01-29T11:03:09Z","relation":"main_file","file_size":834638,"creator":"dernst","checksum":"246b703b091dfe047bfc79abf0891a63","file_name":"2023_JourDifferentialEquations_Agresti.pdf","file_id":"14895","success":1,"content_type":"application/pdf"}],"abstract":[{"text":"In this paper we consider a class of stochastic reaction-diffusion equations. We provide local well-posedness, regularity, blow-up criteria and positivity of solutions. The key novelties of this work are related to the use transport noise, critical spaces and the proof of higher order regularity of solutions – even in case of non-smooth initial data. Crucial tools are Lp(Lp)-theory, maximal regularity estimates and sharp blow-up criteria. We view the results of this paper as a general toolbox for establishing global well-posedness for a large class of reaction-diffusion systems of practical interest, of which many are completely open. In our follow-up work [8], the results of this paper are applied in the specific cases of the Lotka-Volterra equations and the Brusselator model.","lang":"eng"}],"publication_identifier":{"issn":["0022-0396"],"eissn":["1090-2732"]},"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"page":"247-300","ddc":["510"],"date_updated":"2025-04-14T07:53:59Z","publication":"Journal of Differential Equations","date_created":"2023-06-18T22:00:45Z","date_published":"2023-09-25T00:00:00Z","month":"09","ec_funded":1,"article_type":"original","year":"2023","scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","title":"Reaction-diffusion equations with transport noise and critical superlinear diffusion: Local well-posedness and positivity","day":"25"},{"_id":"13138","oa":1,"oa_version":"Preprint","volume":107,"department":[{"_id":"GradSch"}],"citation":{"ista":"Orlov P, Tiutiakina A, Sharipov R, Petrova E, Gritsev V, Kurlov DV. 2023. Adiabatic eigenstate deformations and weak integrability breaking of Heisenberg chain. Physical Review B. 107(18), 184312.","mla":"Orlov, Pavel, et al. “Adiabatic Eigenstate Deformations and Weak Integrability Breaking of Heisenberg Chain.” <i>Physical Review B</i>, vol. 107, no. 18, 184312, American Physical Society, 2023, doi:<a href=\"https://doi.org/10.1103/PhysRevB.107.184312\">10.1103/PhysRevB.107.184312</a>.","ieee":"P. Orlov, A. Tiutiakina, R. Sharipov, E. Petrova, V. Gritsev, and D. V. Kurlov, “Adiabatic eigenstate deformations and weak integrability breaking of Heisenberg chain,” <i>Physical Review B</i>, vol. 107, no. 18. American Physical Society, 2023.","chicago":"Orlov, Pavel, Anastasiia Tiutiakina, Rustem Sharipov, Elena Petrova, Vladimir Gritsev, and Denis V. Kurlov. “Adiabatic Eigenstate Deformations and Weak Integrability Breaking of Heisenberg Chain.” <i>Physical Review B</i>. American Physical Society, 2023. <a href=\"https://doi.org/10.1103/PhysRevB.107.184312\">https://doi.org/10.1103/PhysRevB.107.184312</a>.","short":"P. Orlov, A. Tiutiakina, R. Sharipov, E. Petrova, V. Gritsev, D.V. Kurlov, Physical Review B 107 (2023).","ama":"Orlov P, Tiutiakina A, Sharipov R, Petrova E, Gritsev V, Kurlov DV. Adiabatic eigenstate deformations and weak integrability breaking of Heisenberg chain. <i>Physical Review B</i>. 2023;107(18). doi:<a href=\"https://doi.org/10.1103/PhysRevB.107.184312\">10.1103/PhysRevB.107.184312</a>","apa":"Orlov, P., Tiutiakina, A., Sharipov, R., Petrova, E., Gritsev, V., &#38; Kurlov, D. V. (2023). Adiabatic eigenstate deformations and weak integrability breaking of Heisenberg chain. <i>Physical Review B</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevB.107.184312\">https://doi.org/10.1103/PhysRevB.107.184312</a>"},"arxiv":1,"publisher":"American Physical Society","external_id":{"arxiv":["2303.00729"],"isi":["001003686900004"]},"intvolume":"       107","doi":"10.1103/PhysRevB.107.184312","isi":1,"acknowledgement":"The numerical computations in this work were performed using QuSpin [83, 84]. We acknowledge useful discussions with Igor Aleiner, Boris Altshuler, Jacopo de Nardis, Anatoli Polkovnikov, and Gora Shlyapnikov. We thank Piotr Sierant and Dario Rosa for drawing our attention to Refs. [31, 42, 46] and Ref. [47], respectively. We are grateful to an anonymous referee for very useful comments and for drawing our attention to Refs. [80, 81]. The work of VG is part of the DeltaITP consortium, a program of the Netherlands Organization for Scientific\r\nResearch (NWO) funded by the Dutch Ministry of Education, Culture and Science (OCW). VG is also partially supported by RSF 19-71-10092. The work of AT was supported by the ERC Starting Grant 101042293 (HEPIQ). RS acknowledges support from Slovenian Research Agency (ARRS) - research programme P1-0402. ","issue":"18","status":"public","quality_controlled":"1","article_processing_charge":"No","article_number":"184312","type":"journal_article","publication_status":"published","author":[{"last_name":"Orlov","first_name":"Pavel","full_name":"Orlov, Pavel"},{"last_name":"Tiutiakina","first_name":"Anastasiia","full_name":"Tiutiakina, Anastasiia"},{"first_name":"Rustem","full_name":"Sharipov, Rustem","last_name":"Sharipov"},{"last_name":"Petrova","first_name":"Elena","id":"0ac84990-897b-11ed-a09c-f5abb56a4ede","full_name":"Petrova, Elena"},{"last_name":"Gritsev","first_name":"Vladimir","full_name":"Gritsev, Vladimir"},{"last_name":"Kurlov","first_name":"Denis V.","full_name":"Kurlov, Denis V."}],"language":[{"iso":"eng"}],"publication_identifier":{"issn":["2469-9950"],"eissn":["2469-9969"]},"abstract":[{"lang":"eng","text":"We consider the spin-\r\n1\r\n2\r\n Heisenberg chain (XXX model) weakly perturbed away from integrability by an isotropic next-to-nearest neighbor exchange interaction. Recently, it was conjectured that this model possesses an infinite tower of quasiconserved integrals of motion (charges) [D. Kurlov et al., Phys. Rev. B 105, 104302 (2022)]. In this work we first test this conjecture by investigating how the norm of the adiabatic gauge potential (AGP) scales with the system size, which is known to be a remarkably accurate measure of chaos. We find that for the perturbed XXX chain the behavior of the AGP norm corresponds to neither an integrable nor a chaotic regime, which supports the conjectured quasi-integrability of the model. We then prove the conjecture and explicitly construct the infinite set of quasiconserved charges. Our proof relies on the fact that the XXX chain perturbed by next-to-nearest exchange interaction can be viewed as a truncation of an integrable long-range deformation of the Heisenberg spin chain."}],"main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2303.00729","open_access":"1"}],"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","year":"2023","scopus_import":"1","article_type":"original","day":"01","title":"Adiabatic eigenstate deformations and weak integrability breaking of Heisenberg chain","date_created":"2023-06-18T22:00:46Z","publication":"Physical Review B","date_updated":"2023-08-02T06:16:02Z","month":"05","date_published":"2023-05-01T00:00:00Z"},{"corr_author":"1","alternative_title":["LNCS"],"language":[{"iso":"eng"}],"publication_identifier":{"issn":["0302-9743"],"eissn":["1611-3349"],"isbn":["9783031308222"]},"abstract":[{"lang":"eng","text":"A classical problem for Markov chains is determining their stationary (or steady-state) distribution. This problem has an equally classical solution based on eigenvectors and linear equation systems. However, this approach does not scale to large instances, and iterative solutions are desirable. It turns out that a naive approach, as used by current model checkers, may yield completely wrong results. We present a new approach, which utilizes recent advances in partial exploration and mean payoff computation to obtain a correct, converging approximation."}],"file":[{"file_size":521951,"relation":"main_file","date_updated":"2023-06-19T07:18:40Z","date_created":"2023-06-19T07:18:40Z","access_level":"open_access","file_name":"2023_LNCS_Meggendorfer.pdf","checksum":"59f707a3949c03793251b0d04c62542a","creator":"dernst","content_type":"application/pdf","file_id":"13148","success":1}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"date_updated":"2025-09-09T12:28:12Z","publication":"TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems","date_created":"2023-06-18T22:00:46Z","page":"489-507","ddc":["000"],"month":"04","date_published":"2023-04-22T00:00:00Z","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","scopus_import":"1","year":"2023","day":"22","title":"Correct approximation of stationary distributions","arxiv":1,"external_id":{"arxiv":["2301.08137"],"isi":["001288688000025"]},"publisher":"Springer Nature","_id":"13139","oa_version":"Published Version","oa":1,"conference":{"start_date":"2023-04-22","location":"Paris, France","name":"TACAS: Tools and Algorithms for the Construction and Analysis of Systems","end_date":"2023-04-27"},"file_date_updated":"2023-06-19T07:18:40Z","volume":13993,"department":[{"_id":"KrCh"}],"citation":{"short":"T. Meggendorfer, in:, TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems, Springer Nature, 2023, pp. 489–507.","ama":"Meggendorfer T. Correct approximation of stationary distributions. In: <i>TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems</i>. Vol 13993. Springer Nature; 2023:489-507. doi:<a href=\"https://doi.org/10.1007/978-3-031-30823-9_25\">10.1007/978-3-031-30823-9_25</a>","apa":"Meggendorfer, T. (2023). Correct approximation of stationary distributions. In <i>TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems</i> (Vol. 13993, pp. 489–507). Paris, France: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-031-30823-9_25\">https://doi.org/10.1007/978-3-031-30823-9_25</a>","chicago":"Meggendorfer, Tobias. “Correct Approximation of Stationary Distributions.” In <i>TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems</i>, 13993:489–507. Springer Nature, 2023. <a href=\"https://doi.org/10.1007/978-3-031-30823-9_25\">https://doi.org/10.1007/978-3-031-30823-9_25</a>.","ieee":"T. Meggendorfer, “Correct approximation of stationary distributions,” in <i>TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems</i>, Paris, France, 2023, vol. 13993, pp. 489–507.","ista":"Meggendorfer T. 2023. Correct approximation of stationary distributions. TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems. TACAS: Tools and Algorithms for the Construction and Analysis of Systems, LNCS, vol. 13993, 489–507.","mla":"Meggendorfer, Tobias. “Correct Approximation of Stationary Distributions.” <i>TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems</i>, vol. 13993, Springer Nature, 2023, pp. 489–507, doi:<a href=\"https://doi.org/10.1007/978-3-031-30823-9_25\">10.1007/978-3-031-30823-9_25</a>."},"quality_controlled":"1","article_processing_charge":"No","related_material":{"record":[{"id":"14990","status":"public","relation":"research_data"}]},"type":"conference","author":[{"id":"b21b0c15-30a2-11eb-80dc-f13ca25802e1","first_name":"Tobias","orcid":"0000-0002-1712-2165","full_name":"Meggendorfer, Tobias","last_name":"Meggendorfer"}],"publication_status":"published","doi":"10.1007/978-3-031-30823-9_25","intvolume":"     13993","isi":1,"status":"public","has_accepted_license":"1"},{"date_published":"2023-04-20T00:00:00Z","month":"04","page":"211-228","ddc":["000"],"publication":"TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems","date_updated":"2025-09-09T12:30:00Z","date_created":"2023-06-18T22:00:47Z","title":"Computing adequately permissive assumptions for synthesis","day":"20","scopus_import":"1","year":"2023","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","file":[{"checksum":"60dcafc1b4f6f070be43bad3fe877974","creator":"dernst","file_name":"2023_LNCS_Anand.pdf","content_type":"application/pdf","success":1,"file_id":"13151","relation":"main_file","file_size":521425,"date_updated":"2023-06-19T08:43:21Z","date_created":"2023-06-19T08:43:21Z","access_level":"open_access"}],"publication_identifier":{"eissn":["1611-3349"],"isbn":["9783031308192"],"issn":["0302-9743"]},"abstract":[{"lang":"eng","text":"We automatically compute a new class of environment assumptions in two-player turn-based finite graph games which characterize an “adequate cooperation” needed from the environment to allow the system player to win. Given an ω-regular winning condition Φ for the system player, we compute an ω-regular assumption Ψ for the environment player, such that (i) every environment strategy compliant with Ψ allows the system to fulfill Φ (sufficiency), (ii) Ψ\r\n can be fulfilled by the environment for every strategy of the system (implementability), and (iii) Ψ does not prevent any cooperative strategy choice (permissiveness).\r\nFor parity games, which are canonical representations of ω-regular games, we present a polynomial-time algorithm for the symbolic computation of adequately permissive assumptions and show that our algorithm runs faster and produces better assumptions than existing approaches—both theoretically and empirically. To the best of our knowledge, for ω\r\n-regular games, we provide the first algorithm to compute sufficient and implementable environment assumptions that are also permissive."}],"language":[{"iso":"eng"}],"alternative_title":["LNCS"],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"publication_status":"published","author":[{"full_name":"Anand, Ashwani","first_name":"Ashwani","last_name":"Anand"},{"first_name":"Kaushik","id":"0834ff3c-6d72-11ec-94e0-b5b0a4fb8598","full_name":"Mallik, Kaushik","orcid":"0000-0001-9864-7475","last_name":"Mallik"},{"last_name":"Nayak","full_name":"Nayak, Satya Prakash","first_name":"Satya Prakash"},{"last_name":"Schmuck","full_name":"Schmuck, Anne Kathrin","first_name":"Anne Kathrin"}],"type":"conference","quality_controlled":"1","article_processing_charge":"No","has_accepted_license":"1","status":"public","isi":1,"doi":"10.1007/978-3-031-30820-8_15","intvolume":"     13994","external_id":{"isi":["001288698100015"]},"publisher":"Springer Nature","department":[{"_id":"ToHe"}],"citation":{"short":"A. Anand, K. Mallik, S.P. Nayak, A.K. Schmuck, in:, TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems, Springer Nature, 2023, pp. 211–228.","apa":"Anand, A., Mallik, K., Nayak, S. P., &#38; Schmuck, A. K. (2023). Computing adequately permissive assumptions for synthesis. In <i>TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems</i> (Vol. 13994, pp. 211–228). Paris, France: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-031-30820-8_15\">https://doi.org/10.1007/978-3-031-30820-8_15</a>","ama":"Anand A, Mallik K, Nayak SP, Schmuck AK. Computing adequately permissive assumptions for synthesis. In: <i>TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems</i>. Vol 13994. Springer Nature; 2023:211-228. doi:<a href=\"https://doi.org/10.1007/978-3-031-30820-8_15\">10.1007/978-3-031-30820-8_15</a>","chicago":"Anand, Ashwani, Kaushik Mallik, Satya Prakash Nayak, and Anne Kathrin Schmuck. “Computing Adequately Permissive Assumptions for Synthesis.” In <i>TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems</i>, 13994:211–28. Springer Nature, 2023. <a href=\"https://doi.org/10.1007/978-3-031-30820-8_15\">https://doi.org/10.1007/978-3-031-30820-8_15</a>.","ieee":"A. Anand, K. Mallik, S. P. Nayak, and A. K. Schmuck, “Computing adequately permissive assumptions for synthesis,” in <i>TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems</i>, Paris, France, 2023, vol. 13994, pp. 211–228.","ista":"Anand A, Mallik K, Nayak SP, Schmuck AK. 2023. Computing adequately permissive assumptions for synthesis. TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems. TACAS: Tools and Algorithms for the Construction and Analysis of Systems, LNCS, vol. 13994, 211–228.","mla":"Anand, Ashwani, et al. “Computing Adequately Permissive Assumptions for Synthesis.” <i>TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems</i>, vol. 13994, Springer Nature, 2023, pp. 211–28, doi:<a href=\"https://doi.org/10.1007/978-3-031-30820-8_15\">10.1007/978-3-031-30820-8_15</a>."},"file_date_updated":"2023-06-19T08:43:21Z","volume":13994,"oa_version":"Published Version","_id":"13141","oa":1,"conference":{"name":"TACAS: Tools and Algorithms for the Construction and Analysis of Systems","location":"Paris, France","start_date":"2023-04-22","end_date":"2023-04-27"}},{"scopus_import":"1","year":"2023","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","title":"A learner-verifier framework for neural network controllers and certificates of stochastic systems","day":"22","page":"3-25","ddc":["000"],"date_updated":"2025-09-09T12:29:26Z","publication":"Tools and Algorithms for the Construction and Analysis of Systems ","date_created":"2023-06-18T22:00:47Z","date_published":"2023-04-22T00:00:00Z","month":"04","ec_funded":1,"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"alternative_title":["LNCS"],"language":[{"iso":"eng"}],"corr_author":"1","file":[{"content_type":"application/pdf","file_id":"13150","success":1,"checksum":"3d8a8bb24d211bc83360dfc2fd744307","creator":"dernst","file_name":"2023_LNCS_Chatterjee.pdf","date_updated":"2023-06-19T08:29:30Z","relation":"main_file","file_size":528455,"access_level":"open_access","date_created":"2023-06-19T08:29:30Z"}],"abstract":[{"text":"Reinforcement learning has received much attention for learning controllers of deterministic systems. We consider a learner-verifier framework for stochastic control systems and survey recent methods that formally guarantee a conjunction of reachability and safety properties. Given a property and a lower bound on the probability of the property being satisfied, our framework jointly learns a control policy and a formal certificate to ensure the satisfaction of the property with a desired probability threshold. Both the control policy and the formal certificate are continuous functions from states to reals, which are learned as parameterized neural networks. While in the deterministic case, the certificates are invariant and barrier functions for safety, or Lyapunov and ranking functions for liveness, in the stochastic case the certificates are supermartingales. For certificate verification, we use interval arithmetic abstract interpretation to bound the expected values of neural network functions.","lang":"eng"}],"publication_identifier":{"isbn":["9783031308222"],"eissn":["1611-3349"],"issn":["0302-9743"]},"isi":1,"doi":"10.1007/978-3-031-30823-9_1","intvolume":"     13993","acknowledgement":"This work was supported in part by the ERC-2020-AdG 101020093, ERC CoG 863818 (FoRM-SMArt) and the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 665385.","has_accepted_license":"1","status":"public","quality_controlled":"1","article_processing_charge":"No","author":[{"last_name":"Chatterjee","first_name":"Krishnendu","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-4561-241X","full_name":"Chatterjee, Krishnendu"},{"last_name":"Henzinger","orcid":"0000-0002-2985-7724","full_name":"Henzinger, Thomas A","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","first_name":"Thomas A"},{"full_name":"Lechner, Mathias","first_name":"Mathias","id":"3DC22916-F248-11E8-B48F-1D18A9856A87","last_name":"Lechner"},{"full_name":"Zikelic, Dorde","orcid":"0000-0002-4681-1699","first_name":"Dorde","id":"294AA7A6-F248-11E8-B48F-1D18A9856A87","last_name":"Zikelic"}],"publication_status":"published","type":"conference","file_date_updated":"2023-06-19T08:29:30Z","volume":13993,"oa_version":"Published Version","_id":"13142","oa":1,"conference":{"end_date":"2023-04-27","location":"Paris, France","name":"TACAS: Tools and Algorithms for the Construction and Analysis of Systems","start_date":"2023-04-22"},"project":[{"name":"Formal Methods for Stochastic Models: Algorithms and Applications","call_identifier":"H2020","_id":"0599E47C-7A3F-11EA-A408-12923DDC885E","grant_number":"863818"},{"name":"International IST Doctoral Program","call_identifier":"H2020","grant_number":"665385","_id":"2564DBCA-B435-11E9-9278-68D0E5697425"}],"citation":{"chicago":"Chatterjee, Krishnendu, Thomas A Henzinger, Mathias Lechner, and Dorde Zikelic. “A Learner-Verifier Framework for Neural Network Controllers and Certificates of Stochastic Systems.” In <i>Tools and Algorithms for the Construction and Analysis of Systems </i>, 13993:3–25. Springer Nature, 2023. <a href=\"https://doi.org/10.1007/978-3-031-30823-9_1\">https://doi.org/10.1007/978-3-031-30823-9_1</a>.","apa":"Chatterjee, K., Henzinger, T. A., Lechner, M., &#38; Zikelic, D. (2023). A learner-verifier framework for neural network controllers and certificates of stochastic systems. In <i>Tools and Algorithms for the Construction and Analysis of Systems </i> (Vol. 13993, pp. 3–25). Paris, France: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-031-30823-9_1\">https://doi.org/10.1007/978-3-031-30823-9_1</a>","short":"K. Chatterjee, T.A. Henzinger, M. Lechner, D. Zikelic, in:, Tools and Algorithms for the Construction and Analysis of Systems , Springer Nature, 2023, pp. 3–25.","ama":"Chatterjee K, Henzinger TA, Lechner M, Zikelic D. A learner-verifier framework for neural network controllers and certificates of stochastic systems. In: <i>Tools and Algorithms for the Construction and Analysis of Systems </i>. Vol 13993. Springer Nature; 2023:3-25. doi:<a href=\"https://doi.org/10.1007/978-3-031-30823-9_1\">10.1007/978-3-031-30823-9_1</a>","mla":"Chatterjee, Krishnendu, et al. “A Learner-Verifier Framework for Neural Network Controllers and Certificates of Stochastic Systems.” <i>Tools and Algorithms for the Construction and Analysis of Systems </i>, vol. 13993, Springer Nature, 2023, pp. 3–25, doi:<a href=\"https://doi.org/10.1007/978-3-031-30823-9_1\">10.1007/978-3-031-30823-9_1</a>.","ista":"Chatterjee K, Henzinger TA, Lechner M, Zikelic D. 2023. A learner-verifier framework for neural network controllers and certificates of stochastic systems. Tools and Algorithms for the Construction and Analysis of Systems . TACAS: Tools and Algorithms for the Construction and Analysis of Systems, LNCS, vol. 13993, 3–25.","ieee":"K. Chatterjee, T. A. Henzinger, M. Lechner, and D. Zikelic, “A learner-verifier framework for neural network controllers and certificates of stochastic systems,” in <i>Tools and Algorithms for the Construction and Analysis of Systems </i>, Paris, France, 2023, vol. 13993, pp. 3–25."},"department":[{"_id":"KrCh"},{"_id":"ToHe"}],"external_id":{"isi":["001288688000001"]},"publisher":"Springer Nature"},{"article_processing_charge":"No","quality_controlled":"1","author":[{"last_name":"Dello Schiavo","first_name":"Lorenzo","id":"ECEBF480-9E4F-11EA-B557-B0823DDC885E","orcid":"0000-0002-9881-6870","full_name":"Dello Schiavo, Lorenzo"},{"first_name":"Eugene","full_name":"Lytvynov, Eugene","last_name":"Lytvynov"}],"publication_status":"published","type":"journal_article","isi":1,"doi":"10.1214/23-ECP528","intvolume":"        28","acknowledgement":"Research supported by the Sfb 1060 The Mathematics of Emergent Effects (University of Bonn). L.D.S. gratefully acknowledges funding of his current position by the Austrian Science Fund (FWF) through project ESPRIT 208.","status":"public","has_accepted_license":"1","external_id":{"isi":["001042025400001"]},"publisher":"Institute of Mathematical Statistics","file_date_updated":"2023-06-19T09:37:40Z","volume":28,"oa_version":"Published Version","_id":"13145","oa":1,"project":[{"name":"Configuration Spaces over Non-Smooth Spaces","_id":"34dbf174-11ca-11ed-8bc3-afe9d43d4b9c","grant_number":"E208"}],"citation":{"mla":"Dello Schiavo, Lorenzo, and Eugene Lytvynov. “A Mecke-Type Characterization of the Dirichlet–Ferguson Measure.” <i>Electronic Communications in Probability</i>, vol. 28, Institute of Mathematical Statistics, 2023, pp. 1–12, doi:<a href=\"https://doi.org/10.1214/23-ECP528\">10.1214/23-ECP528</a>.","ista":"Dello Schiavo L, Lytvynov E. 2023. A Mecke-type characterization of the Dirichlet–Ferguson measure. Electronic Communications in Probability. 28, 1–12.","ieee":"L. Dello Schiavo and E. Lytvynov, “A Mecke-type characterization of the Dirichlet–Ferguson measure,” <i>Electronic Communications in Probability</i>, vol. 28. Institute of Mathematical Statistics, pp. 1–12, 2023.","chicago":"Dello Schiavo, Lorenzo, and Eugene Lytvynov. “A Mecke-Type Characterization of the Dirichlet–Ferguson Measure.” <i>Electronic Communications in Probability</i>. Institute of Mathematical Statistics, 2023. <a href=\"https://doi.org/10.1214/23-ECP528\">https://doi.org/10.1214/23-ECP528</a>.","ama":"Dello Schiavo L, Lytvynov E. A Mecke-type characterization of the Dirichlet–Ferguson measure. <i>Electronic Communications in Probability</i>. 2023;28:1-12. doi:<a href=\"https://doi.org/10.1214/23-ECP528\">10.1214/23-ECP528</a>","short":"L. Dello Schiavo, E. Lytvynov, Electronic Communications in Probability 28 (2023) 1–12.","apa":"Dello Schiavo, L., &#38; Lytvynov, E. (2023). A Mecke-type characterization of the Dirichlet–Ferguson measure. <i>Electronic Communications in Probability</i>. Institute of Mathematical Statistics. <a href=\"https://doi.org/10.1214/23-ECP528\">https://doi.org/10.1214/23-ECP528</a>"},"department":[{"_id":"JaMa"}],"page":"1-12","ddc":["510"],"publication":"Electronic Communications in Probability","date_updated":"2025-04-14T12:59:08Z","date_created":"2023-06-18T22:00:48Z","date_published":"2023-05-05T00:00:00Z","month":"05","scopus_import":"1","year":"2023","article_type":"original","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","title":"A Mecke-type characterization of the Dirichlet–Ferguson measure","day":"05","language":[{"iso":"eng"}],"corr_author":"1","file":[{"date_created":"2023-06-19T09:37:40Z","access_level":"open_access","file_size":271434,"relation":"main_file","date_updated":"2023-06-19T09:37:40Z","file_name":"2023_ElectronCommProbability_Schiavo.pdf","creator":"dernst","checksum":"4a543fe4b3f9e747cc52167c17bfb524","file_id":"13152","success":1,"content_type":"application/pdf"}],"publication_identifier":{"eissn":["1083-589X"]},"abstract":[{"text":"We prove a characterization of the Dirichlet–Ferguson measure over an arbitrary finite diffuse measure space. We provide an interpretation of this characterization in analogy with the Mecke identity for Poisson point processes.","lang":"eng"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"}},{"language":[{"iso":"eng"}],"corr_author":"1","file":[{"content_type":"application/pdf","file_id":"13249","success":1,"checksum":"ec8e4295d54171032cdd1b01423eb4a6","creator":"dernst","file_name":"2023_ASHPC_Schloegl.pdf","file_size":316959,"date_updated":"2023-07-18T09:18:55Z","relation":"main_file","access_level":"open_access","date_created":"2023-07-18T09:18:55Z"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"page":"59-59","ddc":["000"],"publication":"ASHPC23 - Austrian-Slovenian HPC Meeting 2023","date_updated":"2024-07-16T10:17:09Z","date_created":"2023-06-23T11:01:23Z","date_published":"2023-07-01T00:00:00Z","month":"07","year":"2023","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","title":"Running Windows-applications on a Linux HPC cluster using WINE","day":"01","publisher":"EuroCC","file_date_updated":"2023-07-18T09:18:55Z","_id":"13161","oa_version":"Submitted Version","oa":1,"conference":{"start_date":"2023-06-13","name":"ASHPC: Austrian-Slovenian HPC Meeting","location":"Maribor, Slovenia","end_date":"2023-06-15"},"department":[{"_id":"ScienComp"},{"_id":"EM-Fac"}],"citation":{"chicago":"Schlögl, Alois, Stefano Elefante, and Victor-Valentin Hodirnau. “Running Windows-Applications on a Linux HPC Cluster Using WINE.” In <i>ASHPC23 - Austrian-Slovenian HPC Meeting 2023</i>, 59–59. EuroCC, 2023.","short":"A. Schlögl, S. Elefante, V.-V. Hodirnau, in:, ASHPC23 - Austrian-Slovenian HPC Meeting 2023, EuroCC, 2023, pp. 59–59.","apa":"Schlögl, A., Elefante, S., &#38; Hodirnau, V.-V. (2023). Running Windows-applications on a Linux HPC cluster using WINE. In <i>ASHPC23 - Austrian-Slovenian HPC Meeting 2023</i> (pp. 59–59). Maribor, Slovenia: EuroCC.","ama":"Schlögl A, Elefante S, Hodirnau V-V. Running Windows-applications on a Linux HPC cluster using WINE. In: <i>ASHPC23 - Austrian-Slovenian HPC Meeting 2023</i>. EuroCC; 2023:59-59.","ista":"Schlögl A, Elefante S, Hodirnau V-V. 2023. Running Windows-applications on a Linux HPC cluster using WINE. ASHPC23 - Austrian-Slovenian HPC Meeting 2023. ASHPC: Austrian-Slovenian HPC Meeting, 59–59.","mla":"Schlögl, Alois, et al. “Running Windows-Applications on a Linux HPC Cluster Using WINE.” <i>ASHPC23 - Austrian-Slovenian HPC Meeting 2023</i>, EuroCC, 2023, pp. 59–59.","ieee":"A. Schlögl, S. Elefante, and V.-V. Hodirnau, “Running Windows-applications on a Linux HPC cluster using WINE,” in <i>ASHPC23 - Austrian-Slovenian HPC Meeting 2023</i>, Maribor, Slovenia, 2023, pp. 59–59."},"article_processing_charge":"No","quality_controlled":"1","publication_status":"published","author":[{"last_name":"Schlögl","first_name":"Alois","id":"45BF87EE-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-5621-8100","full_name":"Schlögl, Alois"},{"last_name":"Elefante","full_name":"Elefante, Stefano","first_name":"Stefano","id":"490F40CE-F248-11E8-B48F-1D18A9856A87"},{"id":"3661B498-F248-11E8-B48F-1D18A9856A87","first_name":"Victor-Valentin","full_name":"Hodirnau, Victor-Valentin","orcid":"0000-0003-3904-947X","last_name":"Hodirnau"}],"type":"conference_abstract","has_accepted_license":"1","status":"public","acknowledgement":"Thanks to Jesse Hansen for his suggestions on improving the abstract."},{"file_date_updated":"2023-07-18T09:28:30Z","_id":"13162","oa_version":"Submitted Version","oa":1,"conference":{"end_date":"2023-06-15","start_date":"2023-06-12","location":"Maribor, Slovenia","name":"ASHPC: Austrian-Slovenian HPC Meeting"},"department":[{"_id":"ScienComp"}],"citation":{"mla":"Elefante, Stefano, et al. “Cryo-EM Software Packages: A Sys-Admins Point of View.” <i>ASHPC23 - Austrian-Slovenian HPC Meeting 2023</i>, EuroCC, 2023, pp. 42–42.","ista":"Elefante S, Stadlbauer S, Alexander MF, Schlögl A. 2023. Cryo-EM software packages: A sys-admins point of view. ASHPC23 - Austrian-Slovenian HPC Meeting 2023. ASHPC: Austrian-Slovenian HPC Meeting, 42–42.","ieee":"S. Elefante, S. Stadlbauer, M. F. Alexander, and A. Schlögl, “Cryo-EM software packages: A sys-admins point of view,” in <i>ASHPC23 - Austrian-Slovenian HPC Meeting 2023</i>, Maribor, Slovenia, 2023, pp. 42–42.","chicago":"Elefante, Stefano, Stephan Stadlbauer, Michael F Alexander, and Alois Schlögl. “Cryo-EM Software Packages: A Sys-Admins Point of View.” In <i>ASHPC23 - Austrian-Slovenian HPC Meeting 2023</i>, 42–42. EuroCC, 2023.","apa":"Elefante, S., Stadlbauer, S., Alexander, M. F., &#38; Schlögl, A. (2023). Cryo-EM software packages: A sys-admins point of view. In <i>ASHPC23 - Austrian-Slovenian HPC Meeting 2023</i> (pp. 42–42). Maribor, Slovenia: EuroCC.","short":"S. Elefante, S. Stadlbauer, M.F. Alexander, A. Schlögl, in:, ASHPC23 - Austrian-Slovenian HPC Meeting 2023, EuroCC, 2023, pp. 42–42.","ama":"Elefante S, Stadlbauer S, Alexander MF, Schlögl A. Cryo-EM software packages: A sys-admins point of view. In: <i>ASHPC23 - Austrian-Slovenian HPC Meeting 2023</i>. EuroCC; 2023:42-42."},"publisher":"EuroCC","has_accepted_license":"1","status":"public","quality_controlled":"1","article_processing_charge":"No","author":[{"last_name":"Elefante","full_name":"Elefante, Stefano","first_name":"Stefano","id":"490F40CE-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Stadlbauer, Stephan","first_name":"Stephan","id":"4D0BC184-F248-11E8-B48F-1D18A9856A87","last_name":"Stadlbauer"},{"first_name":"Michael F","id":"3A02A8FA-F248-11E8-B48F-1D18A9856A87","full_name":"Alexander, Michael F","last_name":"Alexander"},{"id":"45BF87EE-F248-11E8-B48F-1D18A9856A87","first_name":"Alois","orcid":"0000-0002-5621-8100","full_name":"Schlögl, Alois","last_name":"Schlögl"}],"publication_status":"published","type":"conference_abstract","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"language":[{"iso":"eng"}],"corr_author":"1","file":[{"file_name":"2023_ASHPC_Elefante.pdf","creator":"dernst","checksum":"0ab6173cd5c5634ed773cd37ff012681","success":1,"file_id":"13250","content_type":"application/pdf","access_level":"open_access","date_created":"2023-07-18T09:28:30Z","date_updated":"2023-07-18T09:28:30Z","file_size":380354,"relation":"main_file"}],"year":"2023","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","title":"Cryo-EM software packages: A sys-admins point of view","day":"01","page":"42-42","ddc":["000"],"publication":"ASHPC23 - Austrian-Slovenian HPC Meeting 2023","date_updated":"2024-07-16T10:24:07Z","date_created":"2023-06-23T11:03:18Z","date_published":"2023-07-01T00:00:00Z","month":"07"},{"publication_identifier":{"eissn":["2041-1723"]},"abstract":[{"text":"Molecular compatibility between gametes is a prerequisite for successful fertilization. As long as a sperm and egg can recognize and bind each other via their surface proteins, gamete fusion may occur even between members of separate species, resulting in hybrids that can impact speciation. The egg membrane protein Bouncer confers species specificity to gamete interactions between medaka and zebrafish, preventing their cross-fertilization. Here, we leverage this specificity to uncover distinct amino acid residues and N-glycosylation patterns that differentially influence the function of medaka and zebrafish Bouncer and contribute to cross-species incompatibility. Curiously, in contrast to the specificity observed for medaka and zebrafish Bouncer, seahorse and fugu Bouncer are compatible with both zebrafish and medaka sperm, in line with the pervasive purifying selection that dominates Bouncer’s evolution. The Bouncer-sperm interaction is therefore the product of seemingly opposing evolutionary forces that, for some species, restrict fertilization to closely related fish, and for others, allow broad gamete compatibility that enables hybridization.","lang":"eng"}],"file":[{"access_level":"open_access","date_created":"2023-06-26T10:26:04Z","relation":"main_file","date_updated":"2023-06-26T10:26:04Z","file_size":1555006,"file_id":"13172","success":1,"content_type":"application/pdf","file_name":"2023_NatureComm_Gert.pdf","creator":"dernst","checksum":"d6165f41c7f1c2c04b04256ec9f003fb"}],"language":[{"iso":"eng"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"month":"06","date_published":"2023-06-14T00:00:00Z","publication":"Nature Communications","date_updated":"2025-04-23T08:59:40Z","date_created":"2023-06-25T22:00:45Z","ddc":["570"],"day":"14","title":"Divergent molecular signatures in fish Bouncer proteins define cross-fertilization boundaries","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","year":"2023","article_type":"original","scopus_import":"1","external_id":{"pmid":["37316475"],"isi":["001048208600023"]},"publisher":"Springer Nature","department":[{"_id":"FyKo"}],"citation":{"ieee":"K. R. B. Gert <i>et al.</i>, “Divergent molecular signatures in fish Bouncer proteins define cross-fertilization boundaries,” <i>Nature Communications</i>, vol. 14. Springer Nature, 2023.","ista":"Gert KRB, Panser K, Surm J, Steinmetz BS, Schleiffer A, Jovine L, Moran Y, Kondrashov F, Pauli A. 2023. Divergent molecular signatures in fish Bouncer proteins define cross-fertilization boundaries. Nature Communications. 14, 3506.","mla":"Gert, Krista R. B., et al. “Divergent Molecular Signatures in Fish Bouncer Proteins Define Cross-Fertilization Boundaries.” <i>Nature Communications</i>, vol. 14, 3506, Springer Nature, 2023, doi:<a href=\"https://doi.org/10.1038/s41467-023-39317-4\">10.1038/s41467-023-39317-4</a>.","ama":"Gert KRB, Panser K, Surm J, et al. Divergent molecular signatures in fish Bouncer proteins define cross-fertilization boundaries. <i>Nature Communications</i>. 2023;14. doi:<a href=\"https://doi.org/10.1038/s41467-023-39317-4\">10.1038/s41467-023-39317-4</a>","short":"K.R.B. Gert, K. Panser, J. Surm, B.S. Steinmetz, A. Schleiffer, L. Jovine, Y. Moran, F. Kondrashov, A. Pauli, Nature Communications 14 (2023).","apa":"Gert, K. R. B., Panser, K., Surm, J., Steinmetz, B. S., Schleiffer, A., Jovine, L., … Pauli, A. (2023). Divergent molecular signatures in fish Bouncer proteins define cross-fertilization boundaries. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-023-39317-4\">https://doi.org/10.1038/s41467-023-39317-4</a>","chicago":"Gert, Krista R.B., Karin Panser, Joachim Surm, Benjamin S. Steinmetz, Alexander Schleiffer, Luca Jovine, Yehu Moran, Fyodor Kondrashov, and Andrea Pauli. “Divergent Molecular Signatures in Fish Bouncer Proteins Define Cross-Fertilization Boundaries.” <i>Nature Communications</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1038/s41467-023-39317-4\">https://doi.org/10.1038/s41467-023-39317-4</a>."},"_id":"13164","oa_version":"Published Version","oa":1,"volume":14,"file_date_updated":"2023-06-26T10:26:04Z","type":"journal_article","author":[{"last_name":"Gert","first_name":"Krista R.B.","full_name":"Gert, Krista R.B."},{"full_name":"Panser, Karin","first_name":"Karin","last_name":"Panser"},{"last_name":"Surm","first_name":"Joachim","full_name":"Surm, Joachim"},{"last_name":"Steinmetz","full_name":"Steinmetz, Benjamin S.","first_name":"Benjamin S."},{"last_name":"Schleiffer","first_name":"Alexander","full_name":"Schleiffer, Alexander"},{"first_name":"Luca","full_name":"Jovine, Luca","last_name":"Jovine"},{"last_name":"Moran","full_name":"Moran, Yehu","first_name":"Yehu"},{"last_name":"Kondrashov","full_name":"Kondrashov, Fyodor","orcid":"0000-0001-8243-4694","id":"44FDEF62-F248-11E8-B48F-1D18A9856A87","first_name":"Fyodor"},{"first_name":"Andrea","full_name":"Pauli, Andrea","last_name":"Pauli"}],"publication_status":"published","pmid":1,"article_processing_charge":"No","quality_controlled":"1","article_number":"3506","acknowledgement":"We thank Manfred Schartl for sharing RNA-seq data from medaka ovaries and testes prior to publication; Maria Novatchkova for help with RNA-seq analysis; Katharina Lust for advice on medaka techniques; Milan Malinsky for input on Lake Malawi cichlid Bouncer sequences; Felicia Spitzer, Mirjam Binner, and Anna Bandura for help with genotyping; Friedrich Puhl, Kerstin Rattner, Julia Koenig, and Dijana Sunjic for taking care of zebrafish and medaka; and the Pauli lab for helpful discussions about the project and feedback on the manuscript. K.R.B.G. was supported by a DOC Fellowship from the Austrian Academy of Sciences. Work in the Pauli lab was supported by the FWF START program (Y 1031-B28 to A.P.), the ERC CoG 101044495/GaMe, the HFSP Career Development Award (CDA00066/2015 to A.P.), a HFSP Young Investigator Award (RGY0079/2020 to A.P.) and the FWF SFB RNA-Deco (project number F80). The IMP receives institutional funding from Boehringer Ingelheim and the Austrian Research Promotion Agency (Headquarter grant FFG-852936). Work by J.S. and Y.M. in this project was supported by the Israel Science Foundation grant 636/21 to Y.M. Work by L.J. was supported by the Swedish Research Council grant 2020-04936 and the Knut and Alice Wallenberg Foundation grant 2018.0042. For the purpose of Open Access, the author has applied a CC BY public copyright license to any Author Accepted Manuscript (AAM) version arising from this submission.","status":"public","has_accepted_license":"1","doi":"10.1038/s41467-023-39317-4","intvolume":"        14","isi":1},{"file_date_updated":"2024-01-30T12:03:10Z","volume":199,"_id":"13165","oa":1,"oa_version":"Published Version","department":[{"_id":"HeEd"}],"citation":{"short":"L. Fang, H. Huang, J. Pach, G. Tardos, J. Zuo, Journal of Combinatorial Theory. Series A 199 (2023).","ama":"Fang L, Huang H, Pach J, Tardos G, Zuo J. Successive vertex orderings of fully regular graphs. <i>Journal of Combinatorial Theory Series A</i>. 2023;199(10). doi:<a href=\"https://doi.org/10.1016/j.jcta.2023.105776\">10.1016/j.jcta.2023.105776</a>","apa":"Fang, L., Huang, H., Pach, J., Tardos, G., &#38; Zuo, J. (2023). Successive vertex orderings of fully regular graphs. <i>Journal of Combinatorial Theory. Series A</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jcta.2023.105776\">https://doi.org/10.1016/j.jcta.2023.105776</a>","chicago":"Fang, Lixing, Hao Huang, János Pach, Gábor Tardos, and Junchi Zuo. “Successive Vertex Orderings of Fully Regular Graphs.” <i>Journal of Combinatorial Theory. Series A</i>. Elsevier, 2023. <a href=\"https://doi.org/10.1016/j.jcta.2023.105776\">https://doi.org/10.1016/j.jcta.2023.105776</a>.","ieee":"L. Fang, H. Huang, J. Pach, G. Tardos, and J. Zuo, “Successive vertex orderings of fully regular graphs,” <i>Journal of Combinatorial Theory. Series A</i>, vol. 199, no. 10. Elsevier, 2023.","ista":"Fang L, Huang H, Pach J, Tardos G, Zuo J. 2023. Successive vertex orderings of fully regular graphs. Journal of Combinatorial Theory. Series A. 199(10), 105776.","mla":"Fang, Lixing, et al. “Successive Vertex Orderings of Fully Regular Graphs.” <i>Journal of Combinatorial Theory. Series A</i>, vol. 199, no. 10, 105776, Elsevier, 2023, doi:<a href=\"https://doi.org/10.1016/j.jcta.2023.105776\">10.1016/j.jcta.2023.105776</a>."},"arxiv":1,"external_id":{"isi":["001144487800001"],"arxiv":["2206.13592"]},"publisher":"Elsevier","isi":1,"doi":"10.1016/j.jcta.2023.105776","intvolume":"       199","status":"public","issue":"10","has_accepted_license":"1","article_number":"105776","quality_controlled":"1","article_processing_charge":"Yes (in subscription journal)","publication_status":"published","author":[{"first_name":"Lixing","full_name":"Fang, Lixing","last_name":"Fang"},{"full_name":"Huang, Hao","first_name":"Hao","last_name":"Huang"},{"first_name":"János","id":"E62E3130-B088-11EA-B919-BF823C25FEA4","full_name":"Pach, János","last_name":"Pach"},{"first_name":"Gábor","full_name":"Tardos, Gábor","last_name":"Tardos"},{"first_name":"Junchi","full_name":"Zuo, Junchi","last_name":"Zuo"}],"type":"journal_article","tmp":{"name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode","short":"CC BY-NC-SA (4.0)","image":"/images/cc_by_nc_sa.png"},"language":[{"iso":"eng"}],"corr_author":"1","file":[{"file_id":"14902","success":1,"content_type":"application/pdf","creator":"dernst","checksum":"9eebc213b4182a66063a99083ff5bd04","file_name":"2023_JourCombinatiorialTheory_Fang.pdf","date_created":"2024-01-30T12:03:10Z","access_level":"open_access","file_size":352555,"date_updated":"2024-01-30T12:03:10Z","relation":"main_file"}],"publication_identifier":{"eissn":["1096-0899"],"issn":["0097-3165"]},"abstract":[{"text":"A graph G=(V, E) is called fully regular if for every independent set I c V, the number of vertices in V\\I  that are not connected to any element of I depends only on the size of I. A linear ordering of the vertices of G is called successive if for every i, the first i vertices induce a connected subgraph of G. We give an explicit formula for the number of successive vertex orderings of a fully regular graph.\r\nAs an application of our results, we give alternative proofs of two theorems of Stanley and Gao & Peng, determining the number of linear edge orderings of complete graphs and complete bipartite graphs, respectively, with the property that the first i edges induce a connected subgraph.\r\nAs another application, we give a simple product formula for the number of linear orderings of the hyperedges of a complete 3-partite 3-uniform hypergraph such that, for every i, the first i hyperedges induce a connected subgraph. We found similar formulas for complete (non-partite) 3-uniform hypergraphs and in another closely related case, but we managed to verify them only when the number of vertices is small.","lang":"eng"}],"year":"2023","scopus_import":"1","article_type":"original","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","title":"Successive vertex orderings of fully regular graphs","day":"01","ddc":["510"],"publication":"Journal of Combinatorial Theory. Series A","date_updated":"2025-09-09T12:30:39Z","date_created":"2023-06-25T22:00:45Z","date_published":"2023-10-01T00:00:00Z","month":"10"},{"acknowledgement":"We thank N.A. Pertsov White Sea Biological Station of Moscow State University for the help and support in obtaining samples and providing access to all required facilities and equipment of the “Center of Microscopy WSBS MSU”. We are grateful to Dr. Amro Hamdoun for pCS2+8 plasmid (Addgene plasmid # 34931).\r\nWork in the Walentek lab is supported by the Deutsche Forschungsgemeinschaft (DFG) under the Emmy Noether Programme (grant WA3365/2-2) and under Germany’s Excellence Strategy (CIBSS-EXC-2189-Project ID 390939984). SK is supported by the project No. 0088-2021-0009 of the Koltzov Institute of Developmental Biology of the RAS. The study of molecular patterning of D. pumila colony was funded by RFBR, project number 20-04-00978a (to S.K.).","has_accepted_license":"1","status":"public","isi":1,"intvolume":"        13","doi":"10.1038/s41598-023-35979-8","author":[{"last_name":"Vetrova","first_name":"Alexandra A.","full_name":"Vetrova, Alexandra A."},{"full_name":"Kupaeva, Daria M.","first_name":"Daria M.","last_name":"Kupaeva"},{"full_name":"Kizenko, Alena","id":"a521c60b-0815-11ed-9b02-b8bd522477c8","first_name":"Alena","last_name":"Kizenko"},{"full_name":"Lebedeva, Tatiana S.","first_name":"Tatiana S.","last_name":"Lebedeva"},{"last_name":"Walentek","first_name":"Peter","full_name":"Walentek, Peter"},{"first_name":"Nikoloz","full_name":"Tsikolia, Nikoloz","last_name":"Tsikolia"},{"last_name":"Kremnyov","full_name":"Kremnyov, Stanislav V.","first_name":"Stanislav V."}],"publication_status":"published","type":"journal_article","article_number":"9382","article_processing_charge":"No","quality_controlled":"1","pmid":1,"citation":{"ista":"Vetrova AA, Kupaeva DM, Kizenko A, Lebedeva TS, Walentek P, Tsikolia N, Kremnyov SV. 2023. The evolutionary history of Brachyury genes in Hydrozoa involves duplications, divergence, and neofunctionalization. Scientific Reports. 13, 9382.","mla":"Vetrova, Alexandra A., et al. “The Evolutionary History of Brachyury Genes in Hydrozoa Involves Duplications, Divergence, and Neofunctionalization.” <i>Scientific Reports</i>, vol. 13, 9382, Springer Nature, 2023, doi:<a href=\"https://doi.org/10.1038/s41598-023-35979-8\">10.1038/s41598-023-35979-8</a>.","ieee":"A. A. Vetrova <i>et al.</i>, “The evolutionary history of Brachyury genes in Hydrozoa involves duplications, divergence, and neofunctionalization,” <i>Scientific Reports</i>, vol. 13. Springer Nature, 2023.","chicago":"Vetrova, Alexandra A., Daria M. Kupaeva, Alena Kizenko, Tatiana S. Lebedeva, Peter Walentek, Nikoloz Tsikolia, and Stanislav V. Kremnyov. “The Evolutionary History of Brachyury Genes in Hydrozoa Involves Duplications, Divergence, and Neofunctionalization.” <i>Scientific Reports</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1038/s41598-023-35979-8\">https://doi.org/10.1038/s41598-023-35979-8</a>.","short":"A.A. Vetrova, D.M. Kupaeva, A. Kizenko, T.S. Lebedeva, P. Walentek, N. Tsikolia, S.V. Kremnyov, Scientific Reports 13 (2023).","apa":"Vetrova, A. A., Kupaeva, D. M., Kizenko, A., Lebedeva, T. S., Walentek, P., Tsikolia, N., &#38; Kremnyov, S. V. (2023). The evolutionary history of Brachyury genes in Hydrozoa involves duplications, divergence, and neofunctionalization. <i>Scientific Reports</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41598-023-35979-8\">https://doi.org/10.1038/s41598-023-35979-8</a>","ama":"Vetrova AA, Kupaeva DM, Kizenko A, et al. The evolutionary history of Brachyury genes in Hydrozoa involves duplications, divergence, and neofunctionalization. <i>Scientific Reports</i>. 2023;13. doi:<a href=\"https://doi.org/10.1038/s41598-023-35979-8\">10.1038/s41598-023-35979-8</a>"},"department":[{"_id":"GradSch"}],"file_date_updated":"2023-06-26T09:58:53Z","volume":13,"_id":"13166","oa_version":"Published Version","oa":1,"publisher":"Springer Nature","external_id":{"pmid":["37296138"],"isi":["001006690200045"]},"title":"The evolutionary history of Brachyury genes in Hydrozoa involves duplications, divergence, and neofunctionalization","day":"09","year":"2023","scopus_import":"1","article_type":"original","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","date_published":"2023-06-09T00:00:00Z","month":"06","ddc":["570"],"date_created":"2023-06-25T22:00:46Z","date_updated":"2023-08-02T06:17:18Z","publication":"Scientific Reports","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"file":[{"access_level":"open_access","date_created":"2023-06-26T09:58:53Z","relation":"main_file","date_updated":"2023-06-26T09:58:53Z","file_size":4844149,"file_id":"13170","success":1,"content_type":"application/pdf","file_name":"2023_ScientificReports_Vetrova.pdf","creator":"dernst","checksum":"baddf6b2fa9adf88263d4a3b0998f0f2"}],"publication_identifier":{"eissn":["2045-2322"]},"abstract":[{"lang":"eng","text":"Brachyury, a member of T-box gene family, is widely known for its major role in mesoderm specification in bilaterians. It is also present in non-bilaterian metazoans, such as cnidarians, where it acts as a component of an axial patterning system. In this study, we present a phylogenetic analysis of Brachyury genes within phylum Cnidaria, investigate differential expression and address a functional framework of Brachyury paralogs in hydrozoan Dynamena pumila. Our analysis indicates two duplication events of Brachyury within the cnidarian lineage. The first duplication likely appeared in the medusozoan ancestor, resulting in two copies in medusozoans, while the second duplication arose in the hydrozoan ancestor, resulting in three copies in hydrozoans. Brachyury1 and 2 display a conservative expression pattern marking the oral pole of the body axis in D. pumila. On the contrary, Brachyury3 expression was detected in scattered presumably nerve cells of the D. pumila larva. Pharmacological modulations indicated that Brachyury3 is not under regulation of cWnt signaling in contrast to the other two Brachyury genes. Divergence in expression patterns and regulation suggest neofunctionalization of Brachyury3 in hydrozoans."}],"language":[{"iso":"eng"}]},{"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","year":"2023","article_type":"original","scopus_import":"1","day":"15","title":"Effects of urban living environments on mental health in adults","date_updated":"2023-12-13T11:25:55Z","publication":"Nature Medicine","date_created":"2023-06-25T22:00:46Z","page":"1456-1467","ddc":["570"],"month":"06","date_published":"2023-06-15T00:00:00Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"language":[{"iso":"eng"}],"abstract":[{"lang":"eng","text":"Urban-living individuals are exposed to many environmental factors that may combine and interact to influence mental health. While individual factors of an urban environment have been investigated in isolation, no attempt has been made to model how complex, real-life exposure to living in the city relates to brain and mental health, and how this is moderated by genetic factors. Using the data of 156,075 participants from the UK Biobank, we carried out sparse canonical correlation analyses to investigate the relationships between urban environments and psychiatric symptoms. We found an environmental profile of social deprivation, air pollution, street network and urban land-use density that was positively correlated with an affective symptom group (r = 0.22, Pperm < 0.001), mediated by brain volume differences consistent with reward processing, and moderated by genes enriched for stress response, including CRHR1, explaining 2.01% of the variance in brain volume differences. Protective factors such as greenness and generous destination accessibility were negatively correlated with an anxiety symptom group (r = 0.10, Pperm < 0.001), mediated by brain regions necessary for emotion regulation and moderated by EXD3, explaining 1.65% of the variance. The third urban environmental profile was correlated with an emotional instability symptom group (r = 0.03, Pperm < 0.001). Our findings suggest that different environmental profiles of urban living may influence specific psychiatric symptom groups through distinct neurobiological pathways."}],"publication_identifier":{"eissn":["1546-170X"],"issn":["1078-8956"]},"file":[{"file_name":"2023_NatureMedicine_Xu.pdf","checksum":"bcd3225b2731c3442fa98987fd3bd46d","creator":"dernst","content_type":"application/pdf","file_id":"13171","success":1,"date_updated":"2023-06-26T10:15:44Z","file_size":7365360,"relation":"main_file","date_created":"2023-06-26T10:15:44Z","access_level":"open_access"}],"doi":"10.1038/s41591-023-02365-w","intvolume":"        29","isi":1,"acknowledgement":"This work received support from the European Union-funded Horizon Europe project ‘environMENTAL’ (no. 101057429 to G.S., A.M. and M.M.N.) and cofunding by UK Research and Innovation under the UK Government’s Horizon Europe funding guarantee (nos. 10041392 and 10038599) for study design and data analysis; the Horizon 2020-funded European Research Council Advanced Grant ‘STRATIFY’ (no. 695313 to G.S. for study design and data analysis); the Human Brain Project (HBP SGA3, no. 945539 to G.S. for study design and data analysis); the National Institutes of Health (grant no. R01DA049238 to G.S. for study design and data analysis); the German Research Foundation (COPE; grant no. 675346 to G.S. for study design and data analysis); the National Natural Science Foundation of China (grant no. 82001797 to J.X., grant no. 82030053 to C.Y., grant no. 82202093 to J.T. and grant no. 82150710554 to G.S. for study design, data analysis and preparation of the manuscript); National Key Research and Development Program of China (grant no. 2018YFC1314301 to C.Y. for study design and data analysis); Tianjin Applied Basic Research Diversified Investment Foundation (grant no. 21JCYBJC01360 to J.X. for study design and data analysis); Tianjin Health Technology Project (grant no. TJWJ2021QN002 to J.X. for preparation of the manuscript); Science & Technology Development Fund of the Tianjin Education Commission for Higher Education (grant no. 2019KJ195 to J.X. for preparation of the manuscript); the Tianjin Medical University ‘Clinical Talent Training 123 Climbing Plan’ to J.X. for the preparation of the manuscript; Tianjin Key Medical Discipline (Specialty) Construction Project (grant no. TJYXZDXK-001A to C.Y. for preparation of the manuscript); the National Key R&D Program of China (grant no. 2022YFE0209400 to L.Y. for study design and data analysis); the Tsinghua University Initiative Scientific Research Program (grant no. 2021Z11GHX002 to L.Y. for study design and data analysis); the National Key Scientific and Technological Infrastructure Project ‘Earth System Science Numerical Simulator Facility’ (EarthLab to L.Y. for study design and data analysis); the Chinese National High-end Foreign Expert Recruitment Plan to G.S.; and the Alexander von Humboldt Foundation to G.S. for study design and data analysis.","status":"public","has_accepted_license":"1","quality_controlled":"1","article_processing_charge":"No","type":"journal_article","author":[{"last_name":"Xu","first_name":"Jiayuan","full_name":"Xu, Jiayuan"},{"full_name":"Liu, Nana","first_name":"Nana","last_name":"Liu"},{"last_name":"Polemiti","full_name":"Polemiti, Elli","first_name":"Elli"},{"full_name":"Garcia-Mondragon, Liliana","first_name":"Liliana","last_name":"Garcia-Mondragon"},{"last_name":"Tang","first_name":"Jie","full_name":"Tang, Jie"},{"first_name":"Xiaoxuan","full_name":"Liu, Xiaoxuan","last_name":"Liu"},{"full_name":"Lett, Tristram","first_name":"Tristram","last_name":"Lett"},{"first_name":"Le","full_name":"Yu, Le","last_name":"Yu"},{"first_name":"Markus M.","full_name":"Nöthen, Markus M.","last_name":"Nöthen"},{"last_name":"Feng","first_name":"Jianfeng","full_name":"Feng, Jianfeng"},{"first_name":"Chunshui","full_name":"Yu, Chunshui","last_name":"Yu"},{"first_name":"Andre","full_name":"Marquand, Andre","last_name":"Marquand"},{"last_name":"Schumann","full_name":"Schumann, Gunter","first_name":"Gunter"},{"full_name":"Walter, Henrik","first_name":"Henrik","last_name":"Walter"},{"first_name":"Andreas","full_name":"Heinz, Andreas","last_name":"Heinz"},{"last_name":"Ralser","full_name":"Ralser, Markus","first_name":"Markus"},{"last_name":"Twardziok","first_name":"Sven","full_name":"Twardziok, Sven"},{"last_name":"Vaidya","first_name":"Nilakshi","full_name":"Vaidya, Nilakshi"},{"first_name":"Emin","full_name":"Serin, Emin","last_name":"Serin"},{"first_name":"Marcel","full_name":"Jentsch, Marcel","last_name":"Jentsch"},{"last_name":"Hitchen","first_name":"Esther","full_name":"Hitchen, Esther"},{"last_name":"Eils","full_name":"Eils, Roland","first_name":"Roland"},{"last_name":"Taron","first_name":"Ulrike Helene","full_name":"Taron, Ulrike Helene"},{"full_name":"Schütz, Tatjana","first_name":"Tatjana","last_name":"Schütz"},{"last_name":"Schepanski","full_name":"Schepanski, Kerstin","first_name":"Kerstin"},{"first_name":"Jamie","full_name":"Banks, Jamie","last_name":"Banks"},{"last_name":"Banaschewski","full_name":"Banaschewski, Tobias","first_name":"Tobias"},{"last_name":"Jansone","full_name":"Jansone, Karina","first_name":"Karina"},{"full_name":"Christmann, Nina","first_name":"Nina","last_name":"Christmann"},{"full_name":"Meyer-Lindenberg, Andreas","first_name":"Andreas","last_name":"Meyer-Lindenberg"},{"last_name":"Tost","full_name":"Tost, Heike","first_name":"Heike"},{"first_name":"Nathalie","full_name":"Holz, Nathalie","last_name":"Holz"},{"last_name":"Schwarz","first_name":"Emanuel","full_name":"Schwarz, Emanuel"},{"last_name":"Stringaris","full_name":"Stringaris, Argyris","first_name":"Argyris"},{"full_name":"Neidhart, Maja","first_name":"Maja","last_name":"Neidhart"},{"last_name":"Nees","full_name":"Nees, Frauke","first_name":"Frauke"},{"full_name":"Siehl, Sebastian","first_name":"Sebastian","last_name":"Siehl"},{"last_name":"A. Andreassen","first_name":"Ole","full_name":"A. Andreassen, Ole"},{"first_name":"Lars","full_name":"T. Westlye, Lars","last_name":"T. 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Nöthen","full_name":"M. Nöthen, Markus","first_name":"Markus"},{"last_name":"J. Forstner","full_name":"J. 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Ogoh, Nature Medicine 29 (2023) 1456–1467."},"department":[{"_id":"GaNo"}],"external_id":{"isi":["001013172700001"]},"publisher":"Springer Nature"}]