--- OA_place: repository OA_type: green _id: '18629' abstract: - lang: eng text: We study a three-dimensional Gross-Pitaevskii equation that describes a static impurity in a dipolar Bose-Einstein condensate. Our focus is on the interplay between the shape of the impurity and the anisotropy of the medium manifested in the energy and the density of the system. Without external confinement, properties of the system are derived with basic analytical approaches. For a system in a harmonic trap, the model is investigated numerically, using the split-step Crank-Nicolson method. Our results demonstrate that the impurity self-energy is minimized when its shape more closely aligns with the anisotropic character of the bath; in particular a prolate deformed impurity aligned with the direction of the dipoles has the smallest self-energy for a repulsive impurity. Our work complements studies of impurities in Bose gases with zero-range interactions and paves the way for studies of dipolar polarons with a Gross-Pitaevskii equation. acknowledgement: 'The authors acknowledge that this material is based upon work supported by the National Science Foundation/EPSCoR RII Track-1: Emergent Quantum Materials and Technologies (EQUATE), Award No. OIA-2044049.' article_number: '053317' article_processing_charge: No article_type: original arxiv: 1 author: - first_name: Neelam full_name: Shukla, Neelam last_name: Shukla - first_name: Artem full_name: Volosniev, Artem id: 37D278BC-F248-11E8-B48F-1D18A9856A87 last_name: Volosniev orcid: 0000-0003-0393-5525 - first_name: Jeremy R. full_name: Armstrong, Jeremy R. last_name: Armstrong citation: ama: Shukla N, Volosniev A, Armstrong JR. Anisotropic potential immersed in a dipolar Bose-Einstein condensate. Physical Review A. 2024;110(5). doi:10.1103/PhysRevA.110.053317 apa: Shukla, N., Volosniev, A., & Armstrong, J. R. (2024). Anisotropic potential immersed in a dipolar Bose-Einstein condensate. Physical Review A. American Physical Society. https://doi.org/10.1103/PhysRevA.110.053317 chicago: Shukla, Neelam, Artem Volosniev, and Jeremy R. Armstrong. “Anisotropic Potential Immersed in a Dipolar Bose-Einstein Condensate.” Physical Review A. American Physical Society, 2024. https://doi.org/10.1103/PhysRevA.110.053317. ieee: N. Shukla, A. Volosniev, and J. R. Armstrong, “Anisotropic potential immersed in a dipolar Bose-Einstein condensate,” Physical Review A, vol. 110, no. 5. American Physical Society, 2024. ista: Shukla N, Volosniev A, Armstrong JR. 2024. Anisotropic potential immersed in a dipolar Bose-Einstein condensate. Physical Review A. 110(5), 053317. mla: Shukla, Neelam, et al. “Anisotropic Potential Immersed in a Dipolar Bose-Einstein Condensate.” Physical Review A, vol. 110, no. 5, 053317, American Physical Society, 2024, doi:10.1103/PhysRevA.110.053317. short: N. Shukla, A. Volosniev, J.R. Armstrong, Physical Review A 110 (2024). date_created: 2024-12-08T23:01:55Z date_published: 2024-11-18T00:00:00Z date_updated: 2025-09-08T14:56:22Z day: '18' department: - _id: MiLe doi: 10.1103/PhysRevA.110.053317 external_id: arxiv: - '2406.00217' isi: - '001362623400019' intvolume: ' 110' isi: 1 issue: '5' language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.48550/arXiv.2406.00217 month: '11' oa: 1 oa_version: Preprint publication: Physical Review A publication_identifier: eissn: - 2469-9934 issn: - 2469-9926 publication_status: published publisher: American Physical Society quality_controlled: '1' scopus_import: '1' status: public title: Anisotropic potential immersed in a dipolar Bose-Einstein condensate type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 110 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '18645' abstract: - lang: eng text: Gene expression during natural and induced reprogramming is controlled by pioneer transcription factors that initiate transcription from closed chromatin. Nr5a2 is a key pioneer factor that regulates zygotic genome activation in totipotent embryos, pluripotency in embryonic stem cells and metabolism in adult tissues, but the mechanism of its pioneer activity remains poorly understood. Here, we present a cryo-electron microscopy structure of human NR5A2 bound to a nucleosome. The structure shows that the conserved carboxy-terminal extension (CTE) loop of the NR5A2 DNA-binding domain competes with a DNA minor groove anchor of the nucleosome and releases entry-exit site DNA. Mutational analysis showed that NR5A2 D159 of the CTE is dispensable for DNA binding but required for stable nucleosome association and persistent DNA ‘unwrapping’. These findings suggest that NR5A2 belongs to an emerging class of pioneer factors that can use DNA minor groove anchor competition to destabilize nucleosomes and facilitate gene expression during reprogramming. acknowledgement: 'We are very grateful to K. Abe, L. G. Hernandez, C. Kobayashi, K. Straßer and M. Zaczek for their contributions and technical support. We thank N. Thomä for advice on SeEN-seq. We are grateful to A. Musacchio for insightful discussions. We thank J.-M. Peters for critical reading of the manuscript and all members of K.T.’s laboratory for discussions. We thank T. Schäfer at the cryo-EM facility for assistance in cryo-EM data collection, and R. H. Kim for sequencing at the NGS facility, MPIB. K.T. is an Honorary Professor at the Department of Biology, Ludwig-Maximilians-University, Munich. Funding: European Research Council grant ERC-CoG-818556 TotipotentZygotChrom (K.T.). European Research Council grant ERC-StG-804098 ReplisomeBypass (K.D.). Max Planck Society (K.T., K.D.).' article_processing_charge: Yes (in subscription journal) article_type: original author: - first_name: Wataru full_name: Kobayashi, Wataru last_name: Kobayashi - first_name: Anna H. full_name: Sappler, Anna H. last_name: Sappler - first_name: Daniel full_name: Bollschweiler, Daniel last_name: Bollschweiler - first_name: Maximilian full_name: Kümmecke, Maximilian last_name: Kümmecke - first_name: Jérôme full_name: Basquin, Jérôme last_name: Basquin - first_name: Eda Nur full_name: Arslantas, Eda Nur id: 36978b4e-2966-11ef-a72f-b3740ef1cd11 last_name: Arslantas - first_name: Siwat full_name: Ruangroengkulrith, Siwat last_name: Ruangroengkulrith - first_name: Renate full_name: Hornberger, Renate last_name: Hornberger - first_name: Karl full_name: Duderstadt, Karl last_name: Duderstadt - first_name: Kikuë full_name: Tachibana, Kikuë last_name: Tachibana citation: ama: Kobayashi W, Sappler AH, Bollschweiler D, et al. Nucleosome-bound NR5A2 structure reveals pioneer factor mechanism by DNA minor groove anchor competition. Nature Structural & Molecular Biology. 2024;31:757-766. doi:10.1038/s41594-024-01239-0 apa: Kobayashi, W., Sappler, A. H., Bollschweiler, D., Kümmecke, M., Basquin, J., Arslantas, E. N., … Tachibana, K. (2024). Nucleosome-bound NR5A2 structure reveals pioneer factor mechanism by DNA minor groove anchor competition. Nature Structural & Molecular Biology. Springer Nature. https://doi.org/10.1038/s41594-024-01239-0 chicago: Kobayashi, Wataru, Anna H. Sappler, Daniel Bollschweiler, Maximilian Kümmecke, Jérôme Basquin, Eda Nur Arslantas, Siwat Ruangroengkulrith, Renate Hornberger, Karl Duderstadt, and Kikuë Tachibana. “Nucleosome-Bound NR5A2 Structure Reveals Pioneer Factor Mechanism by DNA Minor Groove Anchor Competition.” Nature Structural & Molecular Biology. Springer Nature, 2024. https://doi.org/10.1038/s41594-024-01239-0. ieee: W. Kobayashi et al., “Nucleosome-bound NR5A2 structure reveals pioneer factor mechanism by DNA minor groove anchor competition,” Nature Structural & Molecular Biology, vol. 31. Springer Nature, pp. 757–766, 2024. ista: Kobayashi W, Sappler AH, Bollschweiler D, Kümmecke M, Basquin J, Arslantas EN, Ruangroengkulrith S, Hornberger R, Duderstadt K, Tachibana K. 2024. Nucleosome-bound NR5A2 structure reveals pioneer factor mechanism by DNA minor groove anchor competition. Nature Structural & Molecular Biology. 31, 757–766. mla: Kobayashi, Wataru, et al. “Nucleosome-Bound NR5A2 Structure Reveals Pioneer Factor Mechanism by DNA Minor Groove Anchor Competition.” Nature Structural & Molecular Biology, vol. 31, Springer Nature, 2024, pp. 757–66, doi:10.1038/s41594-024-01239-0. short: W. Kobayashi, A.H. Sappler, D. Bollschweiler, M. Kümmecke, J. Basquin, E.N. Arslantas, S. Ruangroengkulrith, R. Hornberger, K. Duderstadt, K. Tachibana, Nature Structural & Molecular Biology 31 (2024) 757–766. date_created: 2024-12-11T09:10:54Z date_published: 2024-05-01T00:00:00Z date_updated: 2024-12-11T10:56:35Z day: '01' doi: 10.1038/s41594-024-01239-0 extern: '1' intvolume: ' 31' language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.1038/s41594-024-01239-0 month: '05' oa: 1 oa_version: Published Version page: 757-766 publication: Nature Structural & Molecular Biology publication_identifier: eissn: - 1545-9985 issn: - 1545-9993 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: Nucleosome-bound NR5A2 structure reveals pioneer factor mechanism by DNA minor groove anchor competition type: journal_article user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 31 year: '2024' ... --- OA_type: closed access _id: '18651' abstract: - lang: eng text: Embryo axis formation begins with the localized expression of biochemical signals, which organize cell movements and determine cell fate. A quail study finds that tissue contraction and resulting long-range changes in tissue tension restrict the area where these biochemical signals are expressed. article_processing_charge: No article_type: letter_note author: - first_name: Naoya full_name: Hino, Naoya id: 5299a9ce-7679-11eb-a7bc-d1e62b936307 last_name: Hino - first_name: Carolina full_name: Santos Fernandes Lasbarrères Camelo, Carolina id: 6347dca5-074c-11ed-af92-a80f860d9d5b last_name: Santos Fernandes Lasbarrères Camelo - first_name: Carl-Philipp J full_name: Heisenberg, Carl-Philipp J id: 39427864-F248-11E8-B48F-1D18A9856A87 last_name: Heisenberg orcid: 0000-0002-0912-4566 citation: ama: 'Hino N, Santos Fernandes Lasbarrères Camelo C, Heisenberg C-PJ. Development: Turing mechanics. Current Biology. 2024;34(24):R1230-R1232. doi:10.1016/j.cub.2024.10.065' apa: 'Hino, N., Santos Fernandes Lasbarrères Camelo, C., & Heisenberg, C.-P. J. (2024). Development: Turing mechanics. Current Biology. Elsevier. https://doi.org/10.1016/j.cub.2024.10.065' chicago: 'Hino, Naoya, Carolina Santos Fernandes Lasbarrères Camelo, and Carl-Philipp J Heisenberg. “Development: Turing Mechanics.” Current Biology. Elsevier, 2024. https://doi.org/10.1016/j.cub.2024.10.065.' ieee: 'N. Hino, C. Santos Fernandes Lasbarrères Camelo, and C.-P. J. Heisenberg, “Development: Turing mechanics,” Current Biology, vol. 34, no. 24. Elsevier, pp. R1230–R1232, 2024.' ista: 'Hino N, Santos Fernandes Lasbarrères Camelo C, Heisenberg C-PJ. 2024. Development: Turing mechanics. Current Biology. 34(24), R1230–R1232.' mla: 'Hino, Naoya, et al. “Development: Turing Mechanics.” Current Biology, vol. 34, no. 24, Elsevier, 2024, pp. R1230–32, doi:10.1016/j.cub.2024.10.065.' short: N. Hino, C. Santos Fernandes Lasbarrères Camelo, C.-P.J. Heisenberg, Current Biology 34 (2024) R1230–R1232. corr_author: '1' date_created: 2024-12-15T23:01:49Z date_published: 2024-12-16T00:00:00Z date_updated: 2025-09-09T11:51:15Z day: '16' department: - _id: CaHe doi: 10.1016/j.cub.2024.10.065 external_id: isi: - '001392077000001' pmid: - '39689690' intvolume: ' 34' isi: 1 issue: '24' language: - iso: eng month: '12' oa_version: None page: R1230-R1232 pmid: 1 publication: Current Biology publication_identifier: eissn: - 1879-0445 issn: - 0960-9822 publication_status: published publisher: Elsevier quality_controlled: '1' scopus_import: '1' status: public title: 'Development: Turing mechanics' type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 34 year: '2024' ... --- OA_type: closed access _id: '18652' abstract: - lang: eng text: 'Over the last 70 years, information theory and coding has enabled communication technologies that have had an astounding impact on our lives. This is possible due to the match between encoding/decoding strategies and corresponding channel models. Traditional studies of channels have taken one of two extremes: Shannon-theoretic models are inherently average-case in which channel noise is governed by a memoryless stochastic process, whereas coding-theoretic (referred to as “Hamming”) models take a worst-case, adversarial, view of the noise. However, for several existing and emerging communication systems the Shannon/average-case view may be too optimistic, whereas the Hamming/worstcase view may be too pessimistic. This monograph takes up the challenge of studying adversarial channel models that lie between the Shannon and Hamming extremes.' article_processing_charge: No article_type: original author: - first_name: Bikash Kumar full_name: Dey, Bikash Kumar last_name: Dey - first_name: Sidharth full_name: Jaggi, Sidharth last_name: Jaggi - first_name: Michael full_name: Langberg, Michael last_name: Langberg - first_name: Anand D. full_name: Sarwate, Anand D. last_name: Sarwate - first_name: Yihan full_name: Zhang, Yihan id: 2ce5da42-b2ea-11eb-bba5-9f264e9d002c last_name: Zhang orcid: 0000-0002-6465-6258 citation: ama: 'Dey BK, Jaggi S, Langberg M, Sarwate AD, Zhang Y. Codes for adversaries: Between worst-case and average-case jamming. Foundations and Trends in Communications and Information Theory. 2024;21(3-4):300-588. doi:10.1561/0100000112' apa: 'Dey, B. K., Jaggi, S., Langberg, M., Sarwate, A. D., & Zhang, Y. (2024). Codes for adversaries: Between worst-case and average-case jamming. Foundations and Trends in Communications and Information Theory. Now Publishers. https://doi.org/10.1561/0100000112' chicago: 'Dey, Bikash Kumar, Sidharth Jaggi, Michael Langberg, Anand D. Sarwate, and Yihan Zhang. “Codes for Adversaries: Between Worst-Case and Average-Case Jamming.” Foundations and Trends in Communications and Information Theory. Now Publishers, 2024. https://doi.org/10.1561/0100000112.' ieee: 'B. K. Dey, S. Jaggi, M. Langberg, A. D. Sarwate, and Y. Zhang, “Codes for adversaries: Between worst-case and average-case jamming,” Foundations and Trends in Communications and Information Theory, vol. 21, no. 3–4. Now Publishers, pp. 300–588, 2024.' ista: 'Dey BK, Jaggi S, Langberg M, Sarwate AD, Zhang Y. 2024. Codes for adversaries: Between worst-case and average-case jamming. Foundations and Trends in Communications and Information Theory. 21(3–4), 300–588.' mla: 'Dey, Bikash Kumar, et al. “Codes for Adversaries: Between Worst-Case and Average-Case Jamming.” Foundations and Trends in Communications and Information Theory, vol. 21, no. 3–4, Now Publishers, 2024, pp. 300–588, doi:10.1561/0100000112.' short: B.K. Dey, S. Jaggi, M. Langberg, A.D. Sarwate, Y. Zhang, Foundations and Trends in Communications and Information Theory 21 (2024) 300–588. corr_author: '1' date_created: 2024-12-15T23:01:50Z date_published: 2024-12-03T00:00:00Z date_updated: 2024-12-16T10:38:44Z day: '03' department: - _id: MaMo doi: 10.1561/0100000112 intvolume: ' 21' issue: 3-4 language: - iso: eng month: '12' oa_version: None page: 300-588 publication: Foundations and Trends in Communications and Information Theory publication_identifier: eissn: - 1567-2328 issn: - 1567-2190 publication_status: published publisher: Now Publishers quality_controlled: '1' scopus_import: '1' status: public title: 'Codes for adversaries: Between worst-case and average-case jamming' type: journal_article user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 21 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '18653' abstract: - lang: eng text: Charge sensing is a sensitive technique for probing quantum devices, of particular importance for spin-qubit readout. To achieve good readout sensitivities, the proximity of the charge sensor to the device to be measured is a necessity. However, this proximity also means that the operation of the device affects, in turn, the sensor tuning and ultimately the readout sensitivity. We present an approach for compensating for this crosstalk effect allowing for the gate voltages of the measured device to be swept in a 1-V × 1-V window while maintaining a sensor configuration chosen by a Bayesian optimizer. Our algorithm will hopefully be a major contribution to the suite of fully automated solutions required for the operation of large quantum device architectures. acknowledged_ssus: - _id: NanoFab acknowledgement: We thank Nicholas Sim for providing help with the experiment and Sebastian Orbell for helpful discussions. This work was supported by the Royal Society, the Engineering and Physical Sciences Research Council (EPSRC) National Quantum Technology Hub in Networked Quantum Information Technology (Grant No. EP/M013243/1), Quantum Technology Capital (Grant No. EP/N014995/1), the EPSRC Platform Grant (Grant No. EP/R029229/1), the European Research Council (Grant Agreement No. 948932), the Scientific Service Units of the Institute of Science and Technology Austria through resources provided by the nanofabrication facility and, the FWF-I 05060 and HORIZON-RIA 101069515 projects. article_number: '064026' article_processing_charge: No article_type: original author: - first_name: Joseph full_name: Hickie, Joseph last_name: Hickie - first_name: Barnaby full_name: Van Straaten, Barnaby last_name: Van Straaten - first_name: Federico full_name: Fedele, Federico last_name: Fedele - first_name: Daniel full_name: Jirovec, Daniel id: 4C473F58-F248-11E8-B48F-1D18A9856A87 last_name: Jirovec orcid: 0000-0002-7197-4801 - first_name: Andrea full_name: Ballabio, Andrea last_name: Ballabio - first_name: Daniel full_name: Chrastina, Daniel last_name: Chrastina - first_name: Giovanni full_name: Isella, Giovanni last_name: Isella - first_name: Georgios full_name: Katsaros, Georgios id: 38DB5788-F248-11E8-B48F-1D18A9856A87 last_name: Katsaros orcid: 0000-0001-8342-202X - first_name: Natalia full_name: Ares, Natalia last_name: Ares citation: ama: Hickie J, Van Straaten B, Fedele F, et al. Automated long-range compensation of an rf quantum dot sensor. Physical Review Applied. 2024;22(6). doi:10.1103/PhysRevApplied.22.064026 apa: Hickie, J., Van Straaten, B., Fedele, F., Jirovec, D., Ballabio, A., Chrastina, D., … Ares, N. (2024). Automated long-range compensation of an rf quantum dot sensor. Physical Review Applied. American Physical Society. https://doi.org/10.1103/PhysRevApplied.22.064026 chicago: Hickie, Joseph, Barnaby Van Straaten, Federico Fedele, Daniel Jirovec, Andrea Ballabio, Daniel Chrastina, Giovanni Isella, Georgios Katsaros, and Natalia Ares. “Automated Long-Range Compensation of an Rf Quantum Dot Sensor.” Physical Review Applied. American Physical Society, 2024. https://doi.org/10.1103/PhysRevApplied.22.064026. ieee: J. Hickie et al., “Automated long-range compensation of an rf quantum dot sensor,” Physical Review Applied, vol. 22, no. 6. American Physical Society, 2024. ista: Hickie J, Van Straaten B, Fedele F, Jirovec D, Ballabio A, Chrastina D, Isella G, Katsaros G, Ares N. 2024. Automated long-range compensation of an rf quantum dot sensor. Physical Review Applied. 22(6), 064026. mla: Hickie, Joseph, et al. “Automated Long-Range Compensation of an Rf Quantum Dot Sensor.” Physical Review Applied, vol. 22, no. 6, 064026, American Physical Society, 2024, doi:10.1103/PhysRevApplied.22.064026. short: J. Hickie, B. Van Straaten, F. Fedele, D. Jirovec, A. Ballabio, D. Chrastina, G. Isella, G. Katsaros, N. Ares, Physical Review Applied 22 (2024). date_created: 2024-12-15T23:01:50Z date_published: 2024-12-01T00:00:00Z date_updated: 2025-09-09T11:47:52Z day: '01' ddc: - '530' department: - _id: GeKa doi: 10.1103/PhysRevApplied.22.064026 external_id: isi: - '001379155900003' file: - access_level: open_access checksum: bc29a40819abc4969867b6cd6563f7ad content_type: application/pdf creator: dernst date_created: 2024-12-16T11:13:48Z date_updated: 2024-12-16T11:13:48Z file_id: '18662' file_name: 2024_PhysicalReviewApplied_Hickie.pdf file_size: 3560132 relation: main_file success: 1 file_date_updated: 2024-12-16T11:13:48Z has_accepted_license: '1' intvolume: ' 22' isi: 1 issue: '6' language: - iso: eng month: '12' oa: 1 oa_version: Published Version project: - _id: c0977eea-5a5b-11eb-8a69-a862db0cf4d1 grant_number: I05060 name: High impedance circuit quantum electrodynamics with hole spins - _id: 34c0acea-11ca-11ed-8bc3-8775e10fd452 grant_number: '101069515' name: Integrated Germanium Quantum Technology publication: Physical Review Applied publication_identifier: eissn: - 2331-7019 publication_status: published publisher: American Physical Society quality_controlled: '1' scopus_import: '1' status: public title: Automated long-range compensation of an rf quantum dot sensor tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 22 year: '2024' ... --- OA_place: repository OA_type: green _id: '18654' abstract: - lang: eng text: "We compute the rotational anisotropy of the free energy of \U0001D6FC−RuCl3 in an external magnetic field. This quantity, known as the magnetotropic susceptibility, \U0001D458, relates to the second derivative of the free energy with respect to the angle of rotation. We have used approximation-free, auxiliary-field quantum Monte Carlo simulations for a realistic model of \U0001D6FC−RuCl3 and optimized the path integral to alleviate the negative sign problem. This allows us to reach temperatures down to 30K—an energy scale below the dominant Kitaev coupling. We demonstrate that the magnetotropic spin susceptibility in this model of \U0001D6FC−RuCl3 displays scaling behavior \U0001D458=\U0001D447⁢\U0001D453⁡(\U0001D435/\U0001D447) at high temperatures. Once the uniform susceptibility departs from the Curie law (i.e., at the energy scale of the exchange interactions), it appears to transition to an emergent scalinglike behavior, characterized by a different function \U0001D453 at lower temperatures, stemming from the locality of torque fluctuations. We observe a remarkable numerical match between experiment and simulations and we also find qualitative agreement with the pure Kitaev model. In comparison, for the XXZ Heisenberg Hamiltonian, the scaling \U0001D458=\U0001D447⁢\U0001D453⁡(\U0001D435/\U0001D447) breaks down at a temperature scale where the uniform spin susceptibility deviates from the Curie law and never reemerges at low temperatures." acknowledgement: We gratefully acknowledge the Gauss Centre for Supercomputing e.V. for funding this project by providing computing time on the GCS Supercomputer SUPERMUC-NG at the Leibniz Supercomputing Centre (Project No. pn73xu) as well as the scientific support and HPC resources provided by the Erlangen National High Performance Computing Center (NHR@FAU) of the Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU) under the NHR Project b133ae. NHR funding is provided by federal and Bavarian state authorities. NHR@FAU hardware is partially funded by the German Research Foundation (DFG) – 440719683. T.S. thanks funding from the Deutsche Forschungsgemeinschaft under Grant No. SA 3986/1-1 as well as the Würzburg-Dresden Cluster of Excellence on Complexity and Topology in Quantum Matter ct.qmat (EXC 2147, Project ID 390858490). F.F.A. acknowledges financial support from the German Research Foundation (DFG) under the Grant AS 120/16-1 (Project No. 493886309) that is part of the collaborative research project SFB Q-M&S funded by the Austrian Science Fund (FWF) F 86. K.A.M. thanks financial support from the Austrian Science Fund, SFB F 86, Q-M&S. article_number: L201114 article_processing_charge: No article_type: letter_note arxiv: 1 author: - first_name: Toshihiro full_name: Sato, Toshihiro last_name: Sato - first_name: B. J. full_name: Ramshaw, B. J. last_name: Ramshaw - first_name: Kimberly A full_name: Modic, Kimberly A id: 13C26AC0-EB69-11E9-87C6-5F3BE6697425 last_name: Modic orcid: 0000-0001-9760-3147 - first_name: Fakher F. full_name: Assaad, Fakher F. last_name: Assaad citation: ama: 'Sato T, Ramshaw BJ, Modic KA, Assaad FF. Scale-invariant magnetic anisotropy in α-RuCl3: A quantum Monte Carlo study. Physical Review B. 2024;110(20). doi:10.1103/PhysRevB.110.L201114' apa: 'Sato, T., Ramshaw, B. J., Modic, K. A., & Assaad, F. F. (2024). Scale-invariant magnetic anisotropy in α-RuCl3: A quantum Monte Carlo study. Physical Review B. American Physical Society. https://doi.org/10.1103/PhysRevB.110.L201114' chicago: 'Sato, Toshihiro, B. J. Ramshaw, Kimberly A Modic, and Fakher F. Assaad. “Scale-Invariant Magnetic Anisotropy in α-RuCl3: A Quantum Monte Carlo Study.” Physical Review B. American Physical Society, 2024. https://doi.org/10.1103/PhysRevB.110.L201114.' ieee: 'T. Sato, B. J. Ramshaw, K. A. Modic, and F. F. Assaad, “Scale-invariant magnetic anisotropy in α-RuCl3: A quantum Monte Carlo study,” Physical Review B, vol. 110, no. 20. American Physical Society, 2024.' ista: 'Sato T, Ramshaw BJ, Modic KA, Assaad FF. 2024. Scale-invariant magnetic anisotropy in α-RuCl3: A quantum Monte Carlo study. Physical Review B. 110(20), L201114.' mla: 'Sato, Toshihiro, et al. “Scale-Invariant Magnetic Anisotropy in α-RuCl3: A Quantum Monte Carlo Study.” Physical Review B, vol. 110, no. 20, L201114, American Physical Society, 2024, doi:10.1103/PhysRevB.110.L201114.' short: T. Sato, B.J. Ramshaw, K.A. Modic, F.F. Assaad, Physical Review B 110 (2024). date_created: 2024-12-15T23:01:50Z date_published: 2024-11-15T00:00:00Z date_updated: 2025-09-09T11:48:35Z day: '15' department: - _id: KiMo doi: 10.1103/PhysRevB.110.L201114 external_id: arxiv: - '2312.03080' isi: - '001447562900001' intvolume: ' 110' isi: 1 issue: '20' language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.48550/arXiv.2312.03080 month: '11' oa: 1 oa_version: Preprint project: - _id: 34ac8b51-11ca-11ed-8bc3-86c15daa9f8f grant_number: F8607 name: 'Center for Correlated Quantum Materials and Solid State Quantum Systems: Scale- invariance in entangled quantum spin systems' publication: Physical Review B publication_identifier: eissn: - 2469-9969 issn: - 2469-9950 publication_status: published publisher: American Physical Society quality_controlled: '1' scopus_import: '1' status: public title: 'Scale-invariant magnetic anisotropy in α-RuCl3: A quantum Monte Carlo study' type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 110 year: '2024' ... --- DOAJ_listed: '1' OA_place: repository OA_type: gold _id: '18655' abstract: - lang: eng text: "Let Qd be the d-dimensional binary hypercube. We say that P={v1,…,vk} is an increasing path of length k−1 in Qd, if for every i∈[k−1] the edge vivi+1 is obtained by switching some zero coordinate in vi to a one coordinate in vi+1.\r\nForm a random subgraph Qdp by retaining each edge in E(Qd) independently with probability p. We show that there is a phase transition with respect to the length of a longest increasing path around p=ed. Let α be a constant and let p=αd. When αe, whp there is a path of length d−2 in Qdp, and in fact, whether it is of length d−2,d−1, or d depends on whether the all-zero and all-one vertices percolate or not." acknowledgement: "Research supported by the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No. 101034413.\r\nThe authors wish to thank Ross Pinsky for his comments on an earlier version of the paper, and for bringing reference [12] to our attention. The authors are grateful to the anonymous referees for their helpful comments and suggestions." article_number: '70' article_processing_charge: Yes article_type: original arxiv: 1 author: - first_name: Michael full_name: Anastos, Michael id: 0b2a4358-bb35-11ec-b7b9-e3279b593dbb last_name: Anastos - first_name: Sahar full_name: Diskin, Sahar last_name: Diskin - first_name: Dor full_name: Elboim, Dor last_name: Elboim - first_name: Michael full_name: Krivelevich, Michael last_name: Krivelevich citation: ama: Anastos M, Diskin S, Elboim D, Krivelevich M. Climbing up a random subgraph of the hypercube. Electronic Communications in Probability. 2024;29. doi:10.1214/24-ECP639 apa: Anastos, M., Diskin, S., Elboim, D., & Krivelevich, M. (2024). Climbing up a random subgraph of the hypercube. Electronic Communications in Probability. Duke University Press. https://doi.org/10.1214/24-ECP639 chicago: Anastos, Michael, Sahar Diskin, Dor Elboim, and Michael Krivelevich. “Climbing up a Random Subgraph of the Hypercube.” Electronic Communications in Probability. Duke University Press, 2024. https://doi.org/10.1214/24-ECP639. ieee: M. Anastos, S. Diskin, D. Elboim, and M. Krivelevich, “Climbing up a random subgraph of the hypercube,” Electronic Communications in Probability, vol. 29. Duke University Press, 2024. ista: Anastos M, Diskin S, Elboim D, Krivelevich M. 2024. Climbing up a random subgraph of the hypercube. Electronic Communications in Probability. 29, 70. mla: Anastos, Michael, et al. “Climbing up a Random Subgraph of the Hypercube.” Electronic Communications in Probability, vol. 29, 70, Duke University Press, 2024, doi:10.1214/24-ECP639. short: M. Anastos, S. Diskin, D. Elboim, M. Krivelevich, Electronic Communications in Probability 29 (2024). corr_author: '1' date_created: 2024-12-15T23:01:51Z date_published: 2024-11-24T00:00:00Z date_updated: 2025-09-09T11:46:53Z day: '24' ddc: - '510' department: - _id: MaKw doi: 10.1214/24-ECP639 ec_funded: 1 external_id: arxiv: - '2311.16631' isi: - '001356019700001' file: - access_level: open_access checksum: 307a9d049325e6ca9bfe8b4a1f275983 content_type: application/pdf creator: dernst date_created: 2024-12-16T07:33:34Z date_updated: 2024-12-16T07:33:34Z file_id: '18657' file_name: 2024_ElectrCommProbability_Anastos.pdf file_size: 530169 relation: main_file success: 1 file_date_updated: 2024-12-16T07:33:34Z has_accepted_license: '1' intvolume: ' 29' isi: 1 language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.48550/arXiv.2311.16631 month: '11' oa: 1 oa_version: Published Version project: - _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c call_identifier: H2020 grant_number: '101034413' name: 'IST-BRIDGE: International postdoctoral program' publication: Electronic Communications in Probability publication_identifier: eissn: - 1083-589X publication_status: published publisher: Duke University Press quality_controlled: '1' scopus_import: '1' status: public title: Climbing up a random subgraph of the hypercube tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 29 year: '2024' ... --- OA_place: repository _id: '18673' abstract: - lang: eng text: "Motivated by applications to crystalline materials, we generalize the merge tree and the related barcode of a filtered complex to the periodic setting in Euclidean space. They are invariant under isometries, changing bases, and indeed changing lattices. In addition, we prove stability under perturbations and provide an algorithm that under mild geometric conditions typically satisfied by crystalline materials takes O((n+m)logn) time, in which n and m are the numbers of vertices and edges in the quotient complex, respectively.\r\n" acknowledgement: "Both authors are partially supported by the European Research Council (ERC) Horizon 2020 project\r\n‘Alpha Shape Theory Extended’, grant no. 788183. The first author is also partially supported by the DFG\r\nCollaborative Research Center TRR 109, ‘Discretization in Geometry and Dynamics’, Austrian Science Fund\r\n(FWF), grant no. I 02979-N35." article_processing_charge: No arxiv: 1 author: - first_name: Herbert full_name: Edelsbrunner, Herbert id: 3FB178DA-F248-11E8-B48F-1D18A9856A87 last_name: Edelsbrunner orcid: 0000-0002-9823-6833 - first_name: Teresa full_name: Heiss, Teresa id: 4879BB4E-F248-11E8-B48F-1D18A9856A87 last_name: Heiss orcid: 0000-0002-1780-2689 citation: ama: Edelsbrunner H, Heiss T. Merge trees of periodic filtrations. arXiv. doi:10.48550/arXiv.2408.16575 apa: Edelsbrunner, H., & Heiss, T. (n.d.). Merge trees of periodic filtrations. arXiv. https://doi.org/10.48550/arXiv.2408.16575 chicago: Edelsbrunner, Herbert, and Teresa Heiss. “Merge Trees of Periodic Filtrations.” ArXiv, n.d. https://doi.org/10.48550/arXiv.2408.16575. ieee: H. Edelsbrunner and T. Heiss, “Merge trees of periodic filtrations,” arXiv. . ista: Edelsbrunner H, Heiss T. Merge trees of periodic filtrations. arXiv, 10.48550/arXiv.2408.16575. mla: Edelsbrunner, Herbert, and Teresa Heiss. “Merge Trees of Periodic Filtrations.” ArXiv, doi:10.48550/arXiv.2408.16575. short: H. Edelsbrunner, T. Heiss, ArXiv (n.d.). corr_author: '1' date_created: 2024-12-18T14:06:57Z date_published: 2024-08-29T00:00:00Z date_updated: 2026-04-07T12:54:09Z day: '29' department: - _id: HeEd doi: 10.48550/arXiv.2408.16575 ec_funded: 1 external_id: arxiv: - '2408.16575' language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.48550/arXiv.2408.16575 month: '08' oa: 1 oa_version: Preprint project: - _id: 266A2E9E-B435-11E9-9278-68D0E5697425 call_identifier: H2020 grant_number: '788183' name: Alpha Shape Theory Extended - _id: 2561EBF4-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: I02979-N35 name: Persistence and stability of geometric complexes publication: arXiv publication_status: draft related_material: record: - id: '18667' relation: dissertation_contains status: public status: public title: Merge trees of periodic filtrations tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: preprint user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 year: '2024' ... --- OA_place: publisher _id: '18674' abstract: - lang: eng text: Mapping the complex and dense arrangement of cells and their connectivity in brain tissue requires volumetric imaging at nanoscale spatial resolution. While light microscopy excels at visualizing specific molecules and individual cells, achieving dense, synapse-level circuit reconstruction has not been possible with any light microscopy technique. Thus, the goal of my work was to develop image and data analysis pipelines for brain tissue visualization and reconstruction with light microscopy. To achieve dense circuit reconstruction with single-synapse resolution, I developed both conventional and deep-learning-based synapse detection algorithms, as well as connectivity analysis pipelines that integrate synapse detection with volumetric segmentation of brain tissue. acknowledged_ssus: - _id: Bio alternative_title: - ISTA Thesis article_processing_charge: No author: - first_name: Julia full_name: Lyudchik, Julia id: 46E28B80-F248-11E8-B48F-1D18A9856A87 last_name: Lyudchik citation: ama: Lyudchik J. Image analysis for brain tissue reconstruction with super-resolution light microscopy. 2024. doi:10.15479/at:ista:18674 apa: Lyudchik, J. (2024). Image analysis for brain tissue reconstruction with super-resolution light microscopy. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:18674 chicago: Lyudchik, Julia. “Image Analysis for Brain Tissue Reconstruction with Super-Resolution Light Microscopy.” Institute of Science and Technology Austria, 2024. https://doi.org/10.15479/at:ista:18674. ieee: J. Lyudchik, “Image analysis for brain tissue reconstruction with super-resolution light microscopy,” Institute of Science and Technology Austria, 2024. ista: Lyudchik J. 2024. Image analysis for brain tissue reconstruction with super-resolution light microscopy. Institute of Science and Technology Austria. mla: Lyudchik, Julia. Image Analysis for Brain Tissue Reconstruction with Super-Resolution Light Microscopy. Institute of Science and Technology Austria, 2024, doi:10.15479/at:ista:18674. short: J. Lyudchik, Image Analysis for Brain Tissue Reconstruction with Super-Resolution Light Microscopy, Institute of Science and Technology Austria, 2024. corr_author: '1' date_created: 2024-12-18T14:24:43Z date_published: 2024-12-18T00:00:00Z date_updated: 2026-04-14T08:34:35Z day: '18' ddc: - '004' degree_awarded: PhD department: - _id: GradSch - _id: JoDa doi: 10.15479/at:ista:18674 ec_funded: 1 file: - access_level: open_access checksum: 1b42b8073e2bc09fc504da52372248c1 content_type: application/pdf creator: jlyudchi date_created: 2024-12-18T14:17:34Z date_updated: 2024-12-18T14:17:34Z file_id: '18675' file_name: 18122024_PhDthesis_corrected_final_pdfa.pdf file_size: 160536833 relation: main_file success: 1 - access_level: closed checksum: b4da84624060745519723698f7ddf54b content_type: application/vnd.openxmlformats-officedocument.wordprocessingml.document creator: jlyudchi date_created: 2024-12-18T14:21:06Z date_updated: 2024-12-18T14:41:53Z file_id: '18676' file_name: 18122024_PhDthesis_corrected_final_JL_markup.docx file_size: 99172203 relation: source_file file_date_updated: 2024-12-18T14:41:53Z has_accepted_license: '1' language: - iso: eng month: '12' oa: 1 oa_version: Published Version page: '217' project: - _id: 2564DBCA-B435-11E9-9278-68D0E5697425 call_identifier: H2020 grant_number: '665385' name: International IST Doctoral Program publication_identifier: isbn: - ' 978-3-99078-051-0' issn: - 2663-337X publication_status: published publisher: Institute of Science and Technology Austria related_material: record: - id: '11160' relation: part_of_dissertation status: public - id: '18677' relation: part_of_dissertation status: public - id: '13267' relation: part_of_dissertation status: public - id: '14257' relation: part_of_dissertation status: public status: public supervisor: - first_name: Johann G full_name: Danzl, Johann G id: 42EFD3B6-F248-11E8-B48F-1D18A9856A87 last_name: Danzl orcid: 0000-0001-8559-3973 title: Image analysis for brain tissue reconstruction with super-resolution light microscopy tmp: image: /images/cc_by_nc_nd.png legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0) short: CC BY-NC-ND (4.0) type: dissertation user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd year: '2024' ... --- OA_place: repository OA_type: green _id: '18704' abstract: - lang: eng text: Clathrin-mediated endocytosis is the main pathway used by eukaryotic cells to take up extracellular material, but the dominant physical mechanisms driving this process are still elusive. Recently, several high-resolution imaging techniques have been used on different cell lines to measure the geometrical properties of clathrin-coated pits over their whole lifetime. Here, we first show that the combination of all datasets with the recently introduced cooperative curvature model defines a consensus pathway, which is characterized by a flat-to-curved transition at finite area, followed by linear growth and subsequent saturation of curvature. We then apply an energetic model for the composite of the plasma membrane and clathrin coat to this consensus pathway to show that the dominant mechanism for invagination could be coat stiffening, which might originate from cooperative interactions between the different clathrin molecules and progressively drives the system toward its intrinsic curvature. Our theory predicts that two length scales determine the invagination pathway, namely the patch size at which the flat-to-curved transition occurs and the final pit radius. acknowledgement: We thank Markus Mund, Aline Tschanz, and Jonas Ries for helpful discussions and a critical reading of the manuscript. We also kindly acknowledge Simon Scheuring for providing the HS-AFM data for the analysis of clathrin coat invagination. We thank the reviewers of previous versions of this manuscript for useful feedback that helped us to improve this work. F.F. acknowledges financial support by the NOMIS foundation. U.S.S. was supported by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Project No. 240245660 (SFB 1129). Moreover, he is a member of the Interdisciplinary Center for Scientific Computing (IWR) at Heidelberg and of the Max Planck School Matter to Life supported by the German Federal Ministry of Education and Research (BMBF) in collaboration with the Max Planck Society. article_number: '064403' article_processing_charge: No article_type: original arxiv: 1 author: - first_name: Felix F full_name: Frey, Felix F id: a0270b37-8f1a-11ec-95c7-8e710c59a4f3 last_name: Frey orcid: 0000-0001-8501-6017 - first_name: Ulrich S. full_name: Schwarz, Ulrich S. last_name: Schwarz citation: ama: Frey FF, Schwarz US. Coat stiffening can explain invagination of clathrin-coated membranes. Physical Review E. 2024;110(6). doi:10.1103/PhysRevE.110.064403 apa: Frey, F. F., & Schwarz, U. S. (2024). Coat stiffening can explain invagination of clathrin-coated membranes. Physical Review E. American Physical Society. https://doi.org/10.1103/PhysRevE.110.064403 chicago: Frey, Felix F, and Ulrich S. Schwarz. “Coat Stiffening Can Explain Invagination of Clathrin-Coated Membranes.” Physical Review E. American Physical Society, 2024. https://doi.org/10.1103/PhysRevE.110.064403. ieee: F. F. Frey and U. S. Schwarz, “Coat stiffening can explain invagination of clathrin-coated membranes,” Physical Review E, vol. 110, no. 6. American Physical Society, 2024. ista: Frey FF, Schwarz US. 2024. Coat stiffening can explain invagination of clathrin-coated membranes. Physical Review E. 110(6), 064403. mla: Frey, Felix F., and Ulrich S. Schwarz. “Coat Stiffening Can Explain Invagination of Clathrin-Coated Membranes.” Physical Review E, vol. 110, no. 6, 064403, American Physical Society, 2024, doi:10.1103/PhysRevE.110.064403. short: F.F. Frey, U.S. Schwarz, Physical Review E 110 (2024). date_created: 2024-12-22T23:01:48Z date_published: 2024-12-10T00:00:00Z date_updated: 2025-09-09T11:56:34Z day: '10' department: - _id: AnSa doi: 10.1103/PhysRevE.110.064403 external_id: arxiv: - '2405.02820' isi: - '001379135100004' pmid: - '39916158' intvolume: ' 110' isi: 1 issue: '6' language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.48550/arXiv.2405.02820 month: '12' oa: 1 oa_version: Preprint pmid: 1 publication: Physical Review E publication_identifier: eissn: - 2470-0053 issn: - 2470-0045 publication_status: published publisher: American Physical Society quality_controlled: '1' scopus_import: '1' status: public title: Coat stiffening can explain invagination of clathrin-coated membranes type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 110 year: '2024' ... --- DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '18708' abstract: - lang: eng text: This study investigates the response of Indian summer monsoon (ISM) precipitation to CO2 removal, with a specific focus on regional and subseasonal variations. Following CO2 removal, monsoon circulation weakens throughout the summer owing to the reduced large-scale meridional temperature gradient around India. Weakened monsoon circulation decreases the local-scale thermodynamic stability within India, following monsoon-onset periods. While the frequency of synoptic-scale ISM low-pressure systems (LPSs) decreases overall, the lower thermodynamic stability causes the LPSs to form and resultantly shift west and south from their typical paths, last longer and move more quickly zonally during August and September. Changes in these rain-producing processes induce distinct regional (Western Ghats, south-central-east India, and Tamil Nadu) and subseasonal precipitation responses. Also, extreme precipitation exhibits similar patterns, but is more strongly affected by changes in LPS. Our results suggest that reliable future projections of regional hydroclimate change require a more accurate understanding of multi-scale precipitation processes. acknowledgement: This study was supported by the National Research Foundation of Korea (NRF) grant funded by the Korean government (MSIT) (NRF-2018R1A5A1024958, NRF-2021R1C1C2094185, RS-2024-00336160). Model simulation and data transfer were supported by the National Supercomputing Center with supercomputing resources including technical support (KSC-2021-CHA-0030), the National Center for Meteorological Supercomputer of the Korea Meteorological Administration (KMA), and by the Korea Research Environment Open NETwork (KREONET), respectively. DK was supported by New Faculty Startup Fund from Seoul National University. We acknowledge the World Climate Research Programme, which, through its Working Group on Coupled Modelling, coordinated and promoted CMIP6. We thank the climate modeling groups for producing and making available their model output, the Earth System Grid Federation (ESGF) for archiving the data and providing access (https://esgf-node.llnl.gov/projects/cmip6/), and the multiple funding agencies who support CMIP6 and ESGF. article_number: '305' article_processing_charge: Yes article_type: original author: - first_name: Seungmok full_name: Paik, Seungmok last_name: Paik - first_name: Daehyun full_name: Kim, Daehyun last_name: Kim - first_name: Soon Il full_name: An, Soon Il last_name: An - first_name: Hyoeun full_name: Oh, Hyoeun last_name: Oh - first_name: Jongsoo full_name: Shin, Jongsoo last_name: Shin - first_name: Bidyut B full_name: Goswami, Bidyut B id: 3a4ac09c-6d61-11ec-bf66-884cde66b64b last_name: Goswami orcid: 0000-0001-8602-3083 - first_name: Seung Ki full_name: Min, Seung Ki last_name: Min - first_name: Sanjit Kumar full_name: Mondal, Sanjit Kumar last_name: Mondal citation: ama: Paik S, Kim D, An SI, et al. Exploring causes of distinct regional and subseasonal Indian summer monsoon precipitation responses to CO2 removal. npj Climate and Atmospheric Science. 2024;7. doi:10.1038/s41612-024-00858-0 apa: Paik, S., Kim, D., An, S. I., Oh, H., Shin, J., GOSWAMI, B. B., … Mondal, S. K. (2024). Exploring causes of distinct regional and subseasonal Indian summer monsoon precipitation responses to CO2 removal. Npj Climate and Atmospheric Science. Springer Nature. https://doi.org/10.1038/s41612-024-00858-0 chicago: Paik, Seungmok, Daehyun Kim, Soon Il An, Hyoeun Oh, Jongsoo Shin, BIDYUT B GOSWAMI, Seung Ki Min, and Sanjit Kumar Mondal. “Exploring Causes of Distinct Regional and Subseasonal Indian Summer Monsoon Precipitation Responses to CO2 Removal.” Npj Climate and Atmospheric Science. Springer Nature, 2024. https://doi.org/10.1038/s41612-024-00858-0. ieee: S. Paik et al., “Exploring causes of distinct regional and subseasonal Indian summer monsoon precipitation responses to CO2 removal,” npj Climate and Atmospheric Science, vol. 7. Springer Nature, 2024. ista: Paik S, Kim D, An SI, Oh H, Shin J, GOSWAMI BB, Min SK, Mondal SK. 2024. Exploring causes of distinct regional and subseasonal Indian summer monsoon precipitation responses to CO2 removal. npj Climate and Atmospheric Science. 7, 305. mla: Paik, Seungmok, et al. “Exploring Causes of Distinct Regional and Subseasonal Indian Summer Monsoon Precipitation Responses to CO2 Removal.” Npj Climate and Atmospheric Science, vol. 7, 305, Springer Nature, 2024, doi:10.1038/s41612-024-00858-0. short: S. Paik, D. Kim, S.I. An, H. Oh, J. Shin, B.B. GOSWAMI, S.K. Min, S.K. Mondal, Npj Climate and Atmospheric Science 7 (2024). date_created: 2024-12-29T23:01:57Z date_published: 2024-12-19T00:00:00Z date_updated: 2025-09-09T11:51:56Z day: '19' ddc: - '550' department: - _id: CaMu doi: 10.1038/s41612-024-00858-0 external_id: isi: - '001381218300007' file: - access_level: open_access checksum: 6b3148315a444835113c32b399010370 content_type: application/pdf creator: dernst date_created: 2025-01-02T08:49:13Z date_updated: 2025-01-02T08:49:13Z file_id: '18717' file_name: 2024_npjclimate_Paik.pdf file_size: 1927871 relation: main_file success: 1 file_date_updated: 2025-01-02T08:49:13Z has_accepted_license: '1' intvolume: ' 7' isi: 1 language: - iso: eng month: '12' oa: 1 oa_version: Published Version publication: npj Climate and Atmospheric Science publication_identifier: eissn: - 2397-3722 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: Exploring causes of distinct regional and subseasonal Indian summer monsoon precipitation responses to CO2 removal tmp: image: /images/cc_by_nc_nd.png legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0) short: CC BY-NC-ND (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 7 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '18709' abstract: - lang: eng text: We measure the mass distribution of main-sequence (MS) companions to hot subdwarf B stars (sdBs) in post-common envelope binaries (PCEBs). We carried out a spectroscopic survey of 14 eclipsing systems ("HW Vir binaries") with orbital periods of 3.8 < Porb < 12 hr, resulting in a well-understood selection function and a near-complete sample of HW Vir binaries with G < 16. We constrain companion masses from the radial velocity curves of the sdB stars. The companion mass distribution peaks at MMS ≈ 0.15 M⊙ and drops off at MMS > 0.2 M⊙, with only two systems hosting companions above the fully convective limit. There is no correlation between Porb and MMS within the sample. A similar drop-off in the companion mass distribution of white dwarf (WD) + MS PCEBs has been attributed to disrupted magnetic braking (MB) below the fully convective limit. We compare the sdB companion mass distribution to predictions of binary evolution simulations with a range of MB laws. Because sdBs have short lifetimes compared to WDs, explaining the lack of higher-mass MS companions to sdBs with disrupted MB requires MB to be boosted by a factor of 20–100 relative to MB laws inferred from the rotation evolution of single stars. We speculate that such boosting may be a result of irradiation-driven enhancement of the MS stars' winds. An alternative possibility is that common envelope evolution favors low-mass companions in short-period orbits, but the existence of massive WD companions to sdBs with similar periods disfavors this scenario. acknowledgement: "We thank the referee for their constructive comments. We also thank Jim Fuller and Stefan Geier for helpful discussions. The Kavli Institute for Theoretical Physics (KITP) hosted the program, \"White Dwarfs as Probes of the Evolution of Planets, Stars, the Milky Way, and the Expanding Universe,\" during which this project was initiated.\r\n\r\nThis research was supported in part by the U.S. National Science Foundation (NSF) grant AST-2307232, and in part by grants PHY-1748958 and AST-2107070.\r\n\r\nThis work has made use of data from the European Space Agency (ESA) mission Gaia (https://www.cosmos.esa.int/gaia), processed by the Gaia Data Processing and Analysis Consortium (DPAC, https://www.cosmos.esa.int/web/gaia/dpac/consortium). Funding for the DPAC has been provided by national institutions, in particular the institutions participating in the Gaia Multilateral Agreement.\r\n\r\nThis work is based in part on observations obtained with the Samuel Oschin 48 inch Telescope at the Palomar Observatory as part of the Zwicky Transient Facility project. ZTF is supported by the NSF under grant AST-1440341 and a collaboration including Caltech, IPAC, the Weizmann Institute for Science, the Oskar Klein Center at Stockholm University, the University of Maryland, the University of Washington, Deutsches Elektronen-Synchrotron and Humboldt University, Los Alamos National Laboratories, the TANGO Consortium of Taiwan, the University of Wisconsin at Milwaukee, and the Lawrence Berkeley National Laboratory. Operations are conducted by the Caltech Optical Observatories (COO), the Infrared Processing and Analysis Center (IPAC), and the University of Washington (UW).\r\n\r\nSome of the data presented herein were obtained at Keck Observatory, which is a private 501(c)3 non-profit organization operated as a scientific partnership among the California Institute of Technology, the University of California, and the National Aeronautics and Space Administration. The Observatory was made possible by the generous financial support of the W. M. Keck Foundation." article_number: '124201' article_processing_charge: No article_type: original arxiv: 1 author: - first_name: Lisa full_name: Blomberg, Lisa last_name: Blomberg - first_name: Kareem full_name: El-Badry, Kareem last_name: El-Badry - first_name: Katelyn full_name: Breivik, Katelyn last_name: Breivik - first_name: Ilaria full_name: Caiazzo, Ilaria id: 8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d last_name: Caiazzo orcid: 0000-0002-4770-5388 - first_name: Pranav full_name: Nagarajan, Pranav last_name: Nagarajan - first_name: Antonio full_name: Rodriguez, Antonio last_name: Rodriguez - first_name: Jan full_name: Van Roestel, Jan last_name: Van Roestel - first_name: Zachary P. full_name: Vanderbosch, Zachary P. last_name: Vanderbosch - first_name: Natsuko full_name: Yamaguchi, Natsuko last_name: Yamaguchi citation: ama: 'Blomberg L, El-Badry K, Breivik K, et al. The companion mass distribution of post common envelope hot subdwarf binaries: Evidence for boosted and disrupted magnetic braking? Publications of the Astronomical Society of the Pacific. 2024;136(12). doi:10.1088/1538-3873/ad94a2' apa: 'Blomberg, L., El-Badry, K., Breivik, K., Caiazzo, I., Nagarajan, P., Rodriguez, A., … Yamaguchi, N. (2024). The companion mass distribution of post common envelope hot subdwarf binaries: Evidence for boosted and disrupted magnetic braking? Publications of the Astronomical Society of the Pacific. IOP Publishing. https://doi.org/10.1088/1538-3873/ad94a2' chicago: 'Blomberg, Lisa, Kareem El-Badry, Katelyn Breivik, Ilaria Caiazzo, Pranav Nagarajan, Antonio Rodriguez, Jan Van Roestel, Zachary P. Vanderbosch, and Natsuko Yamaguchi. “The Companion Mass Distribution of Post Common Envelope Hot Subdwarf Binaries: Evidence for Boosted and Disrupted Magnetic Braking?” Publications of the Astronomical Society of the Pacific. IOP Publishing, 2024. https://doi.org/10.1088/1538-3873/ad94a2.' ieee: 'L. Blomberg et al., “The companion mass distribution of post common envelope hot subdwarf binaries: Evidence for boosted and disrupted magnetic braking?,” Publications of the Astronomical Society of the Pacific, vol. 136, no. 12. IOP Publishing, 2024.' ista: 'Blomberg L, El-Badry K, Breivik K, Caiazzo I, Nagarajan P, Rodriguez A, Van Roestel J, Vanderbosch ZP, Yamaguchi N. 2024. The companion mass distribution of post common envelope hot subdwarf binaries: Evidence for boosted and disrupted magnetic braking? Publications of the Astronomical Society of the Pacific. 136(12), 124201.' mla: 'Blomberg, Lisa, et al. “The Companion Mass Distribution of Post Common Envelope Hot Subdwarf Binaries: Evidence for Boosted and Disrupted Magnetic Braking?” Publications of the Astronomical Society of the Pacific, vol. 136, no. 12, 124201, IOP Publishing, 2024, doi:10.1088/1538-3873/ad94a2.' short: L. Blomberg, K. El-Badry, K. Breivik, I. Caiazzo, P. Nagarajan, A. Rodriguez, J. Van Roestel, Z.P. Vanderbosch, N. Yamaguchi, Publications of the Astronomical Society of the Pacific 136 (2024). date_created: 2024-12-29T23:01:57Z date_published: 2024-12-01T00:00:00Z date_updated: 2025-09-09T11:55:13Z day: '01' ddc: - '520' department: - _id: IlCa doi: 10.1088/1538-3873/ad94a2 external_id: arxiv: - '2408.15334' isi: - '001379604600001' file: - access_level: open_access checksum: 56fe719e26bc0c2a99ac5322791107e5 content_type: application/pdf creator: dernst date_created: 2025-01-02T09:34:25Z date_updated: 2025-01-02T09:34:25Z file_id: '18719' file_name: 2024_PASP_Blomberg.pdf file_size: 7539133 relation: main_file success: 1 file_date_updated: 2025-01-02T09:34:25Z has_accepted_license: '1' intvolume: ' 136' isi: 1 issue: '12' language: - iso: eng month: '12' oa: 1 oa_version: Published Version publication: Publications of the Astronomical Society of the Pacific publication_identifier: issn: - 0004-6280 publication_status: published publisher: IOP Publishing quality_controlled: '1' scopus_import: '1' status: public title: 'The companion mass distribution of post common envelope hot subdwarf binaries: Evidence for boosted and disrupted magnetic braking?' tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/3.0/legalcode name: Creative Commons Attribution 3.0 Unported (CC BY 3.0) short: CC BY (3.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 136 year: '2024' ... --- _id: '18716' abstract: - lang: eng text: Data for publication 10.1039/d4cp03727h article_processing_charge: No author: - first_name: Mateja full_name: Hrast, Mateja id: 48dbb294-2a9c-11ef-905d-f56be71f0e5d last_name: Hrast citation: ama: 'Hrast M. Data for: Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl. 2024. doi:10.5281/ZENODO.13833474' apa: 'Hrast, M. (2024). Data for: Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl. Zenodo. https://doi.org/10.5281/ZENODO.13833474' chicago: 'Hrast, Mateja. “Data for: Ab Initio Auger Spectrum of the Ultrafast Dissociating 2p3/2−1σ* Resonance in HCl.” Zenodo, 2024. https://doi.org/10.5281/ZENODO.13833474.' ieee: 'M. Hrast, “Data for: Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl.” Zenodo, 2024.' ista: 'Hrast M. 2024. Data for: Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl, Zenodo, 10.5281/ZENODO.13833474.' mla: 'Hrast, Mateja. Data for: Ab Initio Auger Spectrum of the Ultrafast Dissociating 2p3/2−1σ* Resonance in HCl. Zenodo, 2024, doi:10.5281/ZENODO.13833474.' short: M. Hrast, (2024). corr_author: '1' date_created: 2025-01-02T08:21:55Z date_published: 2024-09-24T00:00:00Z date_updated: 2025-05-19T14:03:18Z day: '24' ddc: - '530' department: - _id: MiLe doi: 10.5281/ZENODO.13833474 main_file_link: - open_access: '1' url: https://doi.org/10.5281/zenodo.13833474 month: '09' oa: 1 oa_version: None publisher: Zenodo related_material: record: - id: '18710' relation: used_in_publication status: public status: public title: 'Data for: Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl' type: research_data_reference user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 year: '2024' ... --- OA_place: repository OA_type: green _id: '18755' abstract: - lang: eng text: "A universalthresholdizer (UT), constructed from a threshold fully homomorphic encryption by Boneh et. al , Crypto 2018, is a general framework for universally thresholdizing many cryptographic schemes. However, their framework is insufficient to construct strongly secure threshold schemes, such as threshold signatures and threshold public-key encryption, etc.\r\n\r\nIn this paper, we strengthen the security definition for a universal thresholdizer and propose a scheme which satisfies our stronger security notion. Our UT scheme is an improvement of Boneh et. al ’s construction at the level of threshold fully homomorphic encryption using a key homomorphic pseudorandom function. We apply our strongly secure UT scheme to construct strongly secure threshold signatures and threshold public-key encryption." acknowledgement: Ehsan Ebrahimi is supported by the Luxembourg National Research Fund under the Junior CORE project QSP (C22/IS/17272217/QSP/Ebrahimi). article_processing_charge: No author: - first_name: Ehsan full_name: Ebrahimi, Ehsan last_name: Ebrahimi - first_name: Anshu full_name: Yadav, Anshu id: dc8f1524-403e-11ee-bf07-9649ad996e21 last_name: Yadav citation: ama: 'Ebrahimi E, Yadav A. Strongly secure universal thresholdizer. In: 30th International Conference on the Theory and Application of Cryptology and Information Security. Vol 15486. Springer Nature; 2024:207-239. doi:10.1007/978-981-96-0891-1_7' apa: 'Ebrahimi, E., & Yadav, A. (2024). Strongly secure universal thresholdizer. In 30th International Conference on the Theory and Application of Cryptology and Information Security (Vol. 15486, pp. 207–239). Kolkata, India: Springer Nature. https://doi.org/10.1007/978-981-96-0891-1_7' chicago: Ebrahimi, Ehsan, and Anshu Yadav. “Strongly Secure Universal Thresholdizer.” In 30th International Conference on the Theory and Application of Cryptology and Information Security, 15486:207–39. Springer Nature, 2024. https://doi.org/10.1007/978-981-96-0891-1_7. ieee: E. Ebrahimi and A. Yadav, “Strongly secure universal thresholdizer,” in 30th International Conference on the Theory and Application of Cryptology and Information Security, Kolkata, India, 2024, vol. 15486, pp. 207–239. ista: 'Ebrahimi E, Yadav A. 2024. Strongly secure universal thresholdizer. 30th International Conference on the Theory and Application of Cryptology and Information Security. ASIACRYPT: Conference on the Theory and Application of Cryptology and Information Security vol. 15486, 207–239.' mla: Ebrahimi, Ehsan, and Anshu Yadav. “Strongly Secure Universal Thresholdizer.” 30th International Conference on the Theory and Application of Cryptology and Information Security, vol. 15486, Springer Nature, 2024, pp. 207–39, doi:10.1007/978-981-96-0891-1_7. short: E. Ebrahimi, A. Yadav, in:, 30th International Conference on the Theory and Application of Cryptology and Information Security, Springer Nature, 2024, pp. 207–239. conference: end_date: 2024-12-13 location: Kolkata, India name: 'ASIACRYPT: Conference on the Theory and Application of Cryptology and Information Security' start_date: 2024-12-09 date_created: 2025-01-05T23:01:56Z date_published: 2024-12-12T00:00:00Z date_updated: 2025-09-09T12:00:12Z day: '12' department: - _id: KrPi doi: 10.1007/978-981-96-0891-1_7 external_id: isi: - '001443889100007' intvolume: ' 15486' isi: 1 language: - iso: eng main_file_link: - open_access: '1' url: https://eprint.iacr.org/2024/2078 month: '12' oa: 1 oa_version: Preprint page: 207-239 publication: 30th International Conference on the Theory and Application of Cryptology and Information Security publication_identifier: eissn: - 1611-3349 isbn: - '9789819608904' issn: - 0302-9743 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: Strongly secure universal thresholdizer type: conference user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 15486 year: '2024' ... --- OA_place: repository OA_type: green _id: '18756' abstract: - lang: eng text: "The evasive LWE assumption, proposed by Wee [Eurocrypt’22 Wee] for constructing a lattice-based optimal broadcast encryption, has shown to be a powerful assumption, adopted by subsequent works to construct advanced primitives ranging from ABE variants to obfuscation for null circuits. However, a closer look reveals significant differences among the precise assumption statements involved in different works, leading to the fundamental question of how these assumptions compare to each other. In this work, we initiate a more systematic study on evasive LWE assumptions:\r\n(i) Based on the standard LWE assumption, we construct simple counterexamples against three private-coin evasive LWE variants, used in [Crypto’22 Tsabary, Asiacrypt’22 VWW, Crypto’23 ARYY] respectively, showing that these assumptions are unlikely to hold.\r\n\r\n(ii) Based on existing evasive LWE variants and our counterexamples, we propose and define three classes of plausible evasive LWE assumptions, suitably capturing all existing variants for which we are not aware of non-obfuscation-based counterexamples.\r\n\r\n(iii) We show that under our assumption formulations, the security proofs of [Asiacrypt’22 VWW] and [Crypto’23 ARYY] can be recovered, and we reason why the security proof of [Crypto’22 Tsabary] is also plausibly repairable using an appropriate evasive LWE assumption." acknowledgement: The authors thank the anonymous reviewers for insightful comments which very much improved this work, in particular, sharing with us the counterexamples against a prior version of Hiding Evasive LWE, and against public-coin Evasive LWE when the sampler inputs B. Chris Brzuska and Ivy K. Y. Woo are supported by Research Council of Finland grant 358950. We thank Russell W. F. Lai and Hoeteck Wee for helpful discussions. alternative_title: - LNCS article_processing_charge: No author: - first_name: Chris full_name: Brzuska, Chris last_name: Brzuska - first_name: Akin full_name: Ünal, Akin id: f6b56fb6-dc63-11ee-9dbf-f6780863a85a last_name: Ünal orcid: 0000-0002-8929-0221 - first_name: Ivy K.Y. full_name: Woo, Ivy K.Y. last_name: Woo citation: ama: 'Brzuska C, Ünal A, Woo IKY. Evasive LWE assumptions: Definitions, classes, and counterexamples. In: 30th International Conference on the Theory and Application of Cryptology and Information Security. Vol 15487. Springer Nature; 2024:418-449. doi:10.1007/978-981-96-0894-2_14' apa: 'Brzuska, C., Ünal, A., & Woo, I. K. Y. (2024). Evasive LWE assumptions: Definitions, classes, and counterexamples. In 30th International Conference on the Theory and Application of Cryptology and Information Security (Vol. 15487, pp. 418–449). Kolkata, India: Springer Nature. https://doi.org/10.1007/978-981-96-0894-2_14' chicago: 'Brzuska, Chris, Akin Ünal, and Ivy K.Y. Woo. “Evasive LWE Assumptions: Definitions, Classes, and Counterexamples.” In 30th International Conference on the Theory and Application of Cryptology and Information Security, 15487:418–49. Springer Nature, 2024. https://doi.org/10.1007/978-981-96-0894-2_14.' ieee: 'C. Brzuska, A. Ünal, and I. K. Y. Woo, “Evasive LWE assumptions: Definitions, classes, and counterexamples,” in 30th International Conference on the Theory and Application of Cryptology and Information Security, Kolkata, India, 2024, vol. 15487, pp. 418–449.' ista: 'Brzuska C, Ünal A, Woo IKY. 2024. Evasive LWE assumptions: Definitions, classes, and counterexamples. 30th International Conference on the Theory and Application of Cryptology and Information Security. ASIACRYPT: Conference on the Theory and Application of Cryptology and Information Security, LNCS, vol. 15487, 418–449.' mla: 'Brzuska, Chris, et al. “Evasive LWE Assumptions: Definitions, Classes, and Counterexamples.” 30th International Conference on the Theory and Application of Cryptology and Information Security, vol. 15487, Springer Nature, 2024, pp. 418–49, doi:10.1007/978-981-96-0894-2_14.' short: C. Brzuska, A. Ünal, I.K.Y. Woo, in:, 30th International Conference on the Theory and Application of Cryptology and Information Security, Springer Nature, 2024, pp. 418–449. conference: end_date: 2024-12-13 location: Kolkata, India name: 'ASIACRYPT: Conference on the Theory and Application of Cryptology and Information Security' start_date: 2024-12-09 date_created: 2025-01-05T23:01:56Z date_published: 2024-12-13T00:00:00Z date_updated: 2025-09-09T12:00:51Z day: '13' department: - _id: KrPi doi: 10.1007/978-981-96-0894-2_14 external_id: isi: - '001443890800014' intvolume: ' 15487' isi: 1 language: - iso: eng main_file_link: - open_access: '1' url: https://eprint.iacr.org/2024/2000 month: '12' oa: 1 oa_version: Preprint page: 418-449 publication: 30th International Conference on the Theory and Application of Cryptology and Information Security publication_identifier: eissn: - 1611-3349 isbn: - '9789819608935' issn: - 0302-9743 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: 'Evasive LWE assumptions: Definitions, classes, and counterexamples' type: conference user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 15487 year: '2024' ... --- DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '18757' abstract: - lang: eng text: 'Segmentation is a critical data processing step in many applications of cryo-electron tomography. Downstream analyses, such as subtomogram averaging, are often based on segmentation results, and are thus critically dependent on the availability of open-source software for accurate as well as high-throughput tomogram segmentation. There is a need for more user-friendly, flexible, and comprehensive segmentation software that offers an insightful overview of all steps involved in preparing automated segmentations. Here, we present Ais: a dedicated tomogram segmentation package that is geared towards both high performance and accessibility, available on GitHub. In this report, we demonstrate two common processing steps that can be greatly accelerated with Ais: particle picking for subtomogram averaging, and generating many-feature segmentations of cellular architecture based on in situ tomography data. Featuring comprehensive annotation, segmentation, and rendering functionality, as well as an open repository for trained models at aiscryoet.org, we hope that Ais will help accelerate research and dissemination of data involving cryoET.' acknowledgement: 'We thank A Koster and M Barcena for helpful discussions and kindly sharing the coronaviral replication organelle datasets. We are also grateful to van den Hoek et al., 2022 and Wu et al., 2023, for uploading the data that we used for Figure 5 onto EMPIAR and EMDB, as well as to the authors of various other datasets uploaded to these databases that are not discussed in this manuscript but that were useful for testing the software. We also thank the reviewers, whose comments were very helpful in improving the manuscript and the software. Finally, we are grateful the early Ais users who provided us with feedback on the software and reported issues. This research was supported by the following grants to THS: European Research Council H202 Grant 759517; European Union’s Horizon Europe Program IMAGINE grant 101094250, and the Netherlands Organization for Scientific Research Grant VI.Vidi.193.014.' article_number: '98552' article_processing_charge: Yes article_type: original author: - first_name: Mart G.F. full_name: Last, Mart G.F. last_name: Last - first_name: Leoni full_name: Abendstein, Leoni id: 14f1f051-cd9d-11ef-9c94-8b942a882560 last_name: Abendstein orcid: 0000-0001-7634-5353 - first_name: Lenard M. full_name: Voortman, Lenard M. last_name: Voortman - first_name: Thomas H. full_name: Sharp, Thomas H. last_name: Sharp citation: ama: Last MGF, Abendstein L, Voortman LM, Sharp TH. Streamlining segmentation of cryo-electron tomography datasets with Ais. eLife. 2024;13. doi:10.7554/eLife.98552 apa: Last, M. G. F., Abendstein, L., Voortman, L. M., & Sharp, T. H. (2024). Streamlining segmentation of cryo-electron tomography datasets with Ais. ELife. eLife Sciences Publications. https://doi.org/10.7554/eLife.98552 chicago: Last, Mart G.F., Leoni Abendstein, Lenard M. Voortman, and Thomas H. Sharp. “Streamlining Segmentation of Cryo-Electron Tomography Datasets with Ais.” ELife. eLife Sciences Publications, 2024. https://doi.org/10.7554/eLife.98552. ieee: M. G. F. Last, L. Abendstein, L. M. Voortman, and T. H. Sharp, “Streamlining segmentation of cryo-electron tomography datasets with Ais,” eLife, vol. 13. eLife Sciences Publications, 2024. ista: Last MGF, Abendstein L, Voortman LM, Sharp TH. 2024. Streamlining segmentation of cryo-electron tomography datasets with Ais. eLife. 13, 98552. mla: Last, Mart G. F., et al. “Streamlining Segmentation of Cryo-Electron Tomography Datasets with Ais.” ELife, vol. 13, 98552, eLife Sciences Publications, 2024, doi:10.7554/eLife.98552. short: M.G.F. Last, L. Abendstein, L.M. Voortman, T.H. Sharp, ELife 13 (2024). date_created: 2025-01-05T23:01:57Z date_published: 2024-12-20T00:00:00Z date_updated: 2025-01-08T08:52:51Z day: '20' ddc: - '570' department: - _id: FlPr doi: 10.7554/eLife.98552 external_id: pmid: - '39704648' file: - access_level: open_access checksum: a4f0f906e4d5c1078208b317e78699d1 content_type: application/pdf creator: dernst date_created: 2025-01-08T08:51:45Z date_updated: 2025-01-08T08:51:45Z file_id: '18774' file_name: 2024_eLife_Last.pdf file_size: 7445664 relation: main_file success: 1 file_date_updated: 2025-01-08T08:51:45Z has_accepted_license: '1' intvolume: ' 13' language: - iso: eng month: '12' oa: 1 oa_version: Published Version pmid: 1 publication: eLife publication_identifier: eissn: - 2050-084X publication_status: published publisher: eLife Sciences Publications quality_controlled: '1' scopus_import: '1' status: public title: Streamlining segmentation of cryo-electron tomography datasets with Ais tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 13 year: '2024' ... --- OA_place: publisher OA_type: gold _id: '18758' abstract: - lang: eng text: 'MaxCut is a classical NP-complete problem and a crucial building block in many combinatorial algorithms. The famous Edwards-Erdős bound states that any connected graph on n vertices with m edges contains a cut of size at least m/2+(n-1)/4. Crowston, Jones and Mnich [Algorithmica, 2015] showed that the MaxCut problem on simple connected graphs admits an FPT algorithm, where the parameter k is the difference between the desired cut size c and the lower bound given by the Edwards-Erdős bound. This was later improved by Etscheid and Mnich [Algorithmica, 2017] to run in parameterized linear time, i.e., f(k)⋅ O(m). We improve upon this result in two ways: Firstly, we extend the algorithm to work also for multigraphs (alternatively, graphs with positive integer weights). Secondly, we change the parameter; instead of the difference to the Edwards-Erdős bound, we use the difference to the Poljak-Turzík bound. The Poljak-Turzík bound states that any weighted graph G has a cut of size at least (w(G))/2+(w_MSF(G))/4, where w(G) denotes the total weight of G, and w_MSF(G) denotes the weight of its minimum spanning forest. In connected simple graphs the two bounds are equivalent, but for multigraphs the Poljak-Turzík bound can be larger and thus yield a smaller parameter k. Our algorithm also runs in parameterized linear time, i.e., f(k)⋅ O(m+n).' acknowledgement: "Kalina Petrova: Swiss National Science Foundation, grant no. CRSII5 173721. This project\r\nhas received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 101034413.\r\nSimon Weber: Swiss National Science Foundation under project no. 204320" alternative_title: - LIPIcs article_number: '2' article_processing_charge: Yes arxiv: 1 author: - first_name: Jonas full_name: Lill, Jonas last_name: Lill - first_name: Kalina H full_name: Petrova, Kalina H id: 554ff4e4-f325-11ee-b0c4-a10dbd523381 last_name: Petrova - first_name: Simon full_name: Weber, Simon last_name: Weber citation: ama: 'Lill J, Petrova KH, Weber S. Linear-time MaxCut in multigraphs parameterized above the Poljak-Turzík bound. In: 19th International Symposium on Parameterized and Exact Computation. Vol 321. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2024. doi:10.4230/LIPIcs.IPEC.2024.2' apa: 'Lill, J., Petrova, K. H., & Weber, S. (2024). Linear-time MaxCut in multigraphs parameterized above the Poljak-Turzík bound. In 19th International Symposium on Parameterized and Exact Computation (Vol. 321). Egham, United Kingdom: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.4230/LIPIcs.IPEC.2024.2' chicago: Lill, Jonas, Kalina H Petrova, and Simon Weber. “Linear-Time MaxCut in Multigraphs Parameterized above the Poljak-Turzík Bound.” In 19th International Symposium on Parameterized and Exact Computation, Vol. 321. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2024. https://doi.org/10.4230/LIPIcs.IPEC.2024.2. ieee: J. Lill, K. H. Petrova, and S. Weber, “Linear-time MaxCut in multigraphs parameterized above the Poljak-Turzík bound,” in 19th International Symposium on Parameterized and Exact Computation, Egham, United Kingdom, 2024, vol. 321. ista: 'Lill J, Petrova KH, Weber S. 2024. Linear-time MaxCut in multigraphs parameterized above the Poljak-Turzík bound. 19th International Symposium on Parameterized and Exact Computation. IPEC: Symposium on Parameterized and Exact Computation, LIPIcs, vol. 321, 2.' mla: Lill, Jonas, et al. “Linear-Time MaxCut in Multigraphs Parameterized above the Poljak-Turzík Bound.” 19th International Symposium on Parameterized and Exact Computation, vol. 321, 2, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2024, doi:10.4230/LIPIcs.IPEC.2024.2. short: J. Lill, K.H. Petrova, S. Weber, in:, 19th International Symposium on Parameterized and Exact Computation, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2024. conference: end_date: 2024-09-06 location: Egham, United Kingdom name: 'IPEC: Symposium on Parameterized and Exact Computation' start_date: 2024-09-04 corr_author: '1' date_created: 2025-01-05T23:01:57Z date_published: 2024-12-05T00:00:00Z date_updated: 2026-01-05T13:46:07Z day: '05' ddc: - '500' department: - _id: MaKw doi: 10.4230/LIPIcs.IPEC.2024.2 ec_funded: 1 external_id: arxiv: - '2407.01071' isi: - '001534851900002' file: - access_level: open_access checksum: a64b9a0e41f7b867d25cb155825ccd53 content_type: application/pdf creator: dernst date_created: 2025-01-08T09:14:59Z date_updated: 2025-01-08T09:14:59Z file_id: '18775' file_name: 2024_LIPIcs_Lill.pdf file_size: 927326 relation: main_file success: 1 file_date_updated: 2025-01-08T09:14:59Z has_accepted_license: '1' intvolume: ' 321' isi: 1 language: - iso: eng month: '12' oa: 1 oa_version: Published Version project: - _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c call_identifier: H2020 grant_number: '101034413' name: 'IST-BRIDGE: International postdoctoral program' publication: 19th International Symposium on Parameterized and Exact Computation publication_identifier: isbn: - '9783959773539' issn: - 1868-8969 publication_status: published publisher: Schloss Dagstuhl - Leibniz-Zentrum für Informatik quality_controlled: '1' related_material: record: - id: '19603' relation: later_version status: public scopus_import: '1' status: public title: Linear-time MaxCut in multigraphs parameterized above the Poljak-Turzík bound tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: conference user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 321 year: '2024' ... --- DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '18760' abstract: - lang: eng text: With the remarkable sensitivity and resolution of JWST in the infrared, measuring rest-optical kinematics of galaxies at z > 5 has become possible for the first time. This study pilots a new method for measuring galaxy dynamics for highly multiplexed, unbiased samples by combining FRESCO NIRCam grism spectroscopy and JADES medium-band imaging. Here we present one of the first JWST kinematic measurements for a galaxy at z > 5. We find a significant velocity gradient, which, if interpreted as rotation, yields Vrot = 305 ± 70 km s−1, and we hence refer to this galaxy as Twister-z5. With a rest-frame optical effective radius of re = 2.25 kpc, the high rotation velocity in this galaxy is not due to a compact size, as may be expected in the early Universe, but rather to a high total mass, (math formula). This is a factor of roughly 10× higher than the stellar mass within re. We also observe that the radial Hα equivalent width profile and the specific star formation rate map from resolved stellar population modeling are centrally depressed by a factor of ∼1.5 from the center to re. Combined with the morphology of the line-emitting gas in comparison to the continuum, this centrally suppressed star formation is consistent with a star-forming disk surrounding a bulge growing inside out. While large, rapidly rotating disks are common to z ∼ 2, the existence of one after only 1 Gyr of cosmic time, shown for the first time in ionized gas, adds to the growing evidence that some galaxies matured earlier than expected in the history of the Universe. acknowledgement: We thank the reviewer and editorial staff for their excellent feedback and effort—the manuscript is much stronger as a result. Support for this work was provided by NASA through grant JWST-GO-01895 awarded by the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-26555. H.Ü. gratefully acknowledges support by the Isaac Newton Trust and by the Kavli Foundation through a Newton-Kavli Junior Fellowship. This work has received funding from the Swiss State Secretariat for Education, Research and Innovation (SERI) under contract No. MB22.00072, as well as from the Swiss National Science Foundation (SNSF) through project grant 200020_207349. The Cosmic Dawn Center (DAWN) is funded by the Danish National Research Foundation under grant No. 140. R.S. acknowledges an STFC Ernest Rutherford Fellowship (ST/S004831/1). R.P.N. acknowledges support for this work provided by NASA through the NASA Hubble Fellowship grant HST-HF2-51515.001-A awarded by the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS5-26555. M.V.M. acknowledges support from the National Science Foundation via AAG grant 2205519 and the Wisconsin Alumni Research Foundation via grant MSN251397. R.M. also acknowledges funding from a research professorship from the Royal Society. A.J.B., A.J.C., and G.C.J. acknowledge funding from the "FirstGalaxies" Advanced Grant from the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation program (grant agreement No. 789056). I.L. acknowledges support by the Australian Research Council through Future Fellowship FT220100798. D.J.E. is supported as a Simons Investigator and by a JWST/NIRCam contract to the University of Arizona, NAS5-02015. R.M., J.W., L.S., and W.B. acknowledge support by the Science and Technology Facilities Council (STFC), the ERC through advanced grant 695671 "QUENCH," and the UKRI Frontier Research grant RISEandFALL. B.E.R. acknowledges support from the NIRCam Science Team contract to the University of Arizona, NAS5-02015. The research of C.C.W. is supported by NOIRLab, which is managed by the Association of Universities for Research in Astronomy (AURA) under a cooperative agreement with the National Science Foundation. The HST and JWST image mosaics of the FRESCO fields are released at MAST as a High Level Science Product (P. Oesch & D. Magee 2023). article_number: L27 article_processing_charge: Yes article_type: letter_note arxiv: 1 author: - first_name: Erica full_name: Nelson, Erica last_name: Nelson - first_name: Gabriel full_name: Brammer, Gabriel last_name: Brammer - first_name: Clara full_name: Giménez-Arteaga, Clara last_name: Giménez-Arteaga - first_name: Pascal A. full_name: Oesch, Pascal A. last_name: Oesch - first_name: Rohan P. full_name: Naidu, Rohan P. last_name: Naidu - first_name: Hannah full_name: Übler, Hannah last_name: Übler - first_name: Jasleen full_name: Matharu, Jasleen last_name: Matharu - first_name: Alice E. full_name: Shapley, Alice E. last_name: Shapley - first_name: Katherine E. full_name: Whitaker, Katherine E. last_name: Whitaker - first_name: Emily full_name: Wisnioski, Emily last_name: Wisnioski - first_name: Natascha M. full_name: Förster Schreiber, Natascha M. last_name: Förster Schreiber - first_name: Renske full_name: Smit, Renske last_name: Smit - first_name: Pieter full_name: Van Dokkum, Pieter last_name: Van Dokkum - first_name: John full_name: Chisholm, John last_name: Chisholm - first_name: Ryan full_name: Endsley, Ryan last_name: Endsley - first_name: Abigail I. full_name: Hartley, Abigail I. last_name: Hartley - first_name: Justus full_name: Gibson, Justus last_name: Gibson - first_name: Emma full_name: Giovinazzo, Emma last_name: Giovinazzo - first_name: Garth full_name: Illingworth, Garth last_name: Illingworth - first_name: Ivo full_name: Labbe, Ivo last_name: Labbe - first_name: Michael V. full_name: Maseda, Michael V. last_name: Maseda - first_name: Jorryt J full_name: Matthee, Jorryt J id: 7439a258-f3c0-11ec-9501-9df22fe06720 last_name: Matthee orcid: 0000-0003-2871-127X - first_name: Alba full_name: Covelo Paz, Alba last_name: Covelo Paz - first_name: Sedona H. full_name: Price, Sedona H. last_name: Price - first_name: Naveen A. full_name: Reddy, Naveen A. last_name: Reddy - first_name: Irene full_name: Shivaei, Irene last_name: Shivaei - first_name: Andrea full_name: Weibel, Andrea last_name: Weibel - first_name: Stijn full_name: Wuyts, Stijn last_name: Wuyts - first_name: Mengyuan full_name: Xiao, Mengyuan last_name: Xiao - first_name: Stacey full_name: Alberts, Stacey last_name: Alberts - first_name: William M. full_name: Baker, William M. last_name: Baker - first_name: Andrew J. full_name: Bunker, Andrew J. last_name: Bunker - first_name: Alex J. full_name: Cameron, Alex J. last_name: Cameron - first_name: Stephane full_name: Charlot, Stephane last_name: Charlot - first_name: Daniel J. full_name: Eisenstein, Daniel J. last_name: Eisenstein - first_name: Anna full_name: De Graaff, Anna last_name: De Graaff - first_name: Zhiyuan full_name: Ji, Zhiyuan last_name: Ji - first_name: Benjamin D. full_name: Johnson, Benjamin D. last_name: Johnson - first_name: Gareth C. full_name: Jones, Gareth C. last_name: Jones - first_name: Roberto full_name: Maiolino, Roberto last_name: Maiolino - first_name: Brant full_name: Robertson, Brant last_name: Robertson - first_name: Lester full_name: Sandles, Lester last_name: Sandles - first_name: Katherine A. full_name: Suess, Katherine A. last_name: Suess - first_name: Sandro full_name: Tacchella, Sandro last_name: Tacchella - first_name: Christina C. full_name: Williams, Christina C. last_name: Williams - first_name: Joris full_name: Witstok, Joris last_name: Witstok citation: ama: 'Nelson E, Brammer G, Giménez-Arteaga C, et al. Ionized gas kinematics with FRESCO: An extended, massive, rapidly rotating galaxy at z = 5.4. Astrophysical Journal Letters. 2024;976(2). doi:10.3847/2041-8213/ad7b17' apa: 'Nelson, E., Brammer, G., Giménez-Arteaga, C., Oesch, P. A., Naidu, R. P., Übler, H., … Witstok, J. (2024). Ionized gas kinematics with FRESCO: An extended, massive, rapidly rotating galaxy at z = 5.4. Astrophysical Journal Letters. IOP Publishing. https://doi.org/10.3847/2041-8213/ad7b17' chicago: 'Nelson, Erica, Gabriel Brammer, Clara Giménez-Arteaga, Pascal A. Oesch, Rohan P. Naidu, Hannah Übler, Jasleen Matharu, et al. “Ionized Gas Kinematics with FRESCO: An Extended, Massive, Rapidly Rotating Galaxy at z = 5.4.” Astrophysical Journal Letters. IOP Publishing, 2024. https://doi.org/10.3847/2041-8213/ad7b17.' ieee: 'E. Nelson et al., “Ionized gas kinematics with FRESCO: An extended, massive, rapidly rotating galaxy at z = 5.4,” Astrophysical Journal Letters, vol. 976, no. 2. IOP Publishing, 2024.' ista: 'Nelson E, Brammer G, Giménez-Arteaga C, Oesch PA, Naidu RP, Übler H, Matharu J, Shapley AE, Whitaker KE, Wisnioski E, Förster Schreiber NM, Smit R, Van Dokkum P, Chisholm J, Endsley R, Hartley AI, Gibson J, Giovinazzo E, Illingworth G, Labbe I, Maseda MV, Matthee JJ, Covelo Paz A, Price SH, Reddy NA, Shivaei I, Weibel A, Wuyts S, Xiao M, Alberts S, Baker WM, Bunker AJ, Cameron AJ, Charlot S, Eisenstein DJ, De Graaff A, Ji Z, Johnson BD, Jones GC, Maiolino R, Robertson B, Sandles L, Suess KA, Tacchella S, Williams CC, Witstok J. 2024. Ionized gas kinematics with FRESCO: An extended, massive, rapidly rotating galaxy at z = 5.4. Astrophysical Journal Letters. 976(2), L27.' mla: 'Nelson, Erica, et al. “Ionized Gas Kinematics with FRESCO: An Extended, Massive, Rapidly Rotating Galaxy at z = 5.4.” Astrophysical Journal Letters, vol. 976, no. 2, L27, IOP Publishing, 2024, doi:10.3847/2041-8213/ad7b17.' short: E. Nelson, G. Brammer, C. Giménez-Arteaga, P.A. Oesch, R.P. Naidu, H. Übler, J. Matharu, A.E. Shapley, K.E. Whitaker, E. Wisnioski, N.M. Förster Schreiber, R. Smit, P. Van Dokkum, J. Chisholm, R. Endsley, A.I. Hartley, J. Gibson, E. Giovinazzo, G. Illingworth, I. Labbe, M.V. Maseda, J.J. Matthee, A. Covelo Paz, S.H. Price, N.A. Reddy, I. Shivaei, A. Weibel, S. Wuyts, M. Xiao, S. Alberts, W.M. Baker, A.J. Bunker, A.J. Cameron, S. Charlot, D.J. Eisenstein, A. De Graaff, Z. Ji, B.D. Johnson, G.C. Jones, R. Maiolino, B. Robertson, L. Sandles, K.A. Suess, S. Tacchella, C.C. Williams, J. Witstok, Astrophysical Journal Letters 976 (2024). date_created: 2025-01-05T23:01:58Z date_published: 2024-12-01T00:00:00Z date_updated: 2025-09-09T11:58:02Z day: '01' ddc: - '520' department: - _id: JoMa doi: 10.3847/2041-8213/ad7b17 external_id: arxiv: - '2310.06887' isi: - '001364636000001' file: - access_level: open_access checksum: 5c7320196586b4340e55f215d8737185 content_type: application/pdf creator: dernst date_created: 2025-01-08T08:18:39Z date_updated: 2025-01-08T08:18:39Z file_id: '18771' file_name: 2024_AstrophysicalJour_Nelson.pdf file_size: 1822989 relation: main_file success: 1 file_date_updated: 2025-01-08T08:18:39Z has_accepted_license: '1' intvolume: ' 976' isi: 1 issue: '2' language: - iso: eng month: '12' oa: 1 oa_version: Published Version publication: Astrophysical Journal Letters publication_identifier: eissn: - 2041-8213 issn: - 2041-8205 publication_status: published publisher: IOP Publishing quality_controlled: '1' scopus_import: '1' status: public title: 'Ionized gas kinematics with FRESCO: An extended, massive, rapidly rotating galaxy at z = 5.4' tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 976 year: '2024' ... --- DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '18761' abstract: - lang: eng text: Termites, together with cockroaches, belong to the Blattodea. They possess an XX/XY sex determination system which has evolved from an XX/X0 system present in other Blattodean species, such as cockroaches and wood roaches. Little is currently known about the sex chromosomes of termites, their gene content, or their evolution. We here investigate the X chromosome of multiple termite species and compare them with the X chromosome of cockroaches using genomic and transcriptomic data. We find that the X chromosome of the termite Macrotermes natalensis is large and differentiated showing hall marks of sex chromosome evolution such as dosage compensation, while this does not seem to be the case in the other two termite species investigated here where sex chromosomes may be evolutionary younger. Furthermore, the X chromosome in M. natalensis is different from the X chromosome found in the cockroach Blattella germanica indicating that sex chromosome turn-over events may have happened during termite evolution. acknowledged_ssus: - _id: ScienComp acknowledgement: "urthermore, we thank all lab members and collaborators for feedback on the project. Specifically, Dino McMahon provided R. flavipes males and females, Judith Korb provided C. secundus males and females, gave feedback on the project and discussed questions on termite reproduction, Mireille Vasseur-Cognet provided M. natalensis males and females, Ariana Macon performed the lab work for sequencing and the Vicoso group gave critical feedback on the project. We furthermore thank the HPC group at IST Austria and Christian Meesters at JGU Mainz for their technical support.\r\nThis work was supported by a Österreichischer Wissenschaftsfonds (FWF) grant of the Meitner Programme to A.K.H. (project number M 2484), funding by the Deutsche Forschungsgemeinschaft (DFG) of the Research Training Group GenEvo (project number 407023052) to A.K.H., R.F., and A.D., and funding of the DFG within the Schwerpunktprogramm Gevol to A.K.H. and R.M. (project number 503256468)." article_number: evae265 article_processing_charge: Yes article_type: original author: - first_name: Roxanne full_name: Fraser, Roxanne last_name: Fraser - first_name: Ruth full_name: Moraa, Ruth last_name: Moraa - first_name: Annika full_name: Djolai, Annika last_name: Djolai - first_name: Nils full_name: Meisenheimer, Nils last_name: Meisenheimer - first_name: Sophie full_name: Laube, Sophie last_name: Laube - first_name: Beatriz full_name: Vicoso, Beatriz id: 49E1C5C6-F248-11E8-B48F-1D18A9856A87 last_name: Vicoso orcid: 0000-0002-4579-8306 - first_name: Ann K full_name: Huylmans, Ann K id: 4C0A3874-F248-11E8-B48F-1D18A9856A87 last_name: Huylmans orcid: 0000-0001-8871-4961 citation: ama: Fraser R, Moraa R, Djolai A, et al. Evidence for a novel X chromosome in termites. Genome Biology and Evolution. 2024;16(12). doi:10.1093/gbe/evae265 apa: Fraser, R., Moraa, R., Djolai, A., Meisenheimer, N., Laube, S., Vicoso, B., & Huylmans, A. K. (2024). Evidence for a novel X chromosome in termites. Genome Biology and Evolution. Oxford University Press. https://doi.org/10.1093/gbe/evae265 chicago: Fraser, Roxanne, Ruth Moraa, Annika Djolai, Nils Meisenheimer, Sophie Laube, Beatriz Vicoso, and Ann K Huylmans. “Evidence for a Novel X Chromosome in Termites.” Genome Biology and Evolution. Oxford University Press, 2024. https://doi.org/10.1093/gbe/evae265. ieee: R. Fraser et al., “Evidence for a novel X chromosome in termites,” Genome Biology and Evolution, vol. 16, no. 12. Oxford University Press, 2024. ista: Fraser R, Moraa R, Djolai A, Meisenheimer N, Laube S, Vicoso B, Huylmans AK. 2024. Evidence for a novel X chromosome in termites. Genome Biology and Evolution. 16(12), evae265. mla: Fraser, Roxanne, et al. “Evidence for a Novel X Chromosome in Termites.” Genome Biology and Evolution, vol. 16, no. 12, evae265, Oxford University Press, 2024, doi:10.1093/gbe/evae265. short: R. Fraser, R. Moraa, A. Djolai, N. Meisenheimer, S. Laube, B. Vicoso, A.K. Huylmans, Genome Biology and Evolution 16 (2024). corr_author: '1' date_created: 2025-01-05T23:01:58Z date_published: 2024-12-01T00:00:00Z date_updated: 2025-09-09T11:58:41Z day: '01' ddc: - '570' department: - _id: BeVi doi: 10.1093/gbe/evae265 external_id: isi: - '001380841100001' pmid: - '39658246' file: - access_level: open_access checksum: 9cf8fd14580dd694dd810ccca808ad0e content_type: application/pdf creator: dernst date_created: 2025-01-08T08:28:07Z date_updated: 2025-01-08T08:28:07Z file_id: '18772' file_name: 2024_GBE_Fraser.pdf file_size: 795106 relation: main_file success: 1 file_date_updated: 2025-01-08T08:28:07Z has_accepted_license: '1' intvolume: ' 16' isi: 1 issue: '12' language: - iso: eng month: '12' oa: 1 oa_version: Published Version pmid: 1 project: - _id: 26641CAC-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: M02484 name: Sex Determination in Termites publication: Genome Biology and Evolution publication_identifier: eissn: - 1759-6653 publication_status: published publisher: Oxford University Press quality_controlled: '1' scopus_import: '1' status: public title: Evidence for a novel X chromosome in termites tmp: image: /images/cc_by_nc.png legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0) short: CC BY-NC (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 16 year: '2024' ... --- DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '18762' abstract: - lang: eng text: Consider the random variable $\mathrm{Tr}( f_1(W)A_1\dots f_k(W)A_k)$ where $W$ is an $N\times N$ Hermitian Wigner matrix, $k\in\mathbb{N}$, and choose (possibly $N$-dependent) regular functions $f_1,\dots, f_k$ as well as bounded deterministic matrices $A_1,\dots,A_k$. We give a functional central limit theorem showing that the fluctuations around the expectation are Gaussian. Moreover, we determine the limiting covariance structure and give explicit error bounds in terms of the scaling of $f_1,\dots,f_k$ and the number of traceless matrices among $A_1,\dots,A_k$, thus extending the results of [Cipolloni, Erdős, Schröder 2023] to products of arbitrary length $k\geq2$. As an application, we consider the fluctuation of $\mathrm{Tr}(\mathrm{e}^{\mathrm{i} tW}A_1\mathrm{e}^{-\mathrm{i} tW}A_2)$ around its thermal value $\mathrm{Tr}(A_1)\mathrm{Tr}(A_2)$ when $t$ is large and give an explicit formula for the variance. acknowledgement: "I am very grateful to László Erdős for suggesting the topic and many valuable discussions during my work on the project. I would also like to thank the two anonymous referees for their careful reading of the manuscript and detailed feedback.\r\nPartially supported by ERC Advanced Grants “RMTBeyond” No. 101020331 and “LDRaM” No. 884584." article_number: '191' article_processing_charge: Yes article_type: original arxiv: 1 author: - first_name: Jana full_name: Reker, Jana id: e796e4f9-dc8d-11ea-abe3-97e26a0323e9 last_name: Reker citation: ama: Reker J. Multi-point functional central limit theorem for Wigner matrices. Electronic Journal of Probability. 2024;29. doi:10.1214/24-EJP1247 apa: Reker, J. (2024). Multi-point functional central limit theorem for Wigner matrices. Electronic Journal of Probability. Institute of Mathematical Statistics. https://doi.org/10.1214/24-EJP1247 chicago: Reker, Jana. “Multi-Point Functional Central Limit Theorem for Wigner Matrices.” Electronic Journal of Probability. Institute of Mathematical Statistics, 2024. https://doi.org/10.1214/24-EJP1247. ieee: J. Reker, “Multi-point functional central limit theorem for Wigner matrices,” Electronic Journal of Probability, vol. 29. Institute of Mathematical Statistics, 2024. ista: Reker J. 2024. Multi-point functional central limit theorem for Wigner matrices. Electronic Journal of Probability. 29, 191. mla: Reker, Jana. “Multi-Point Functional Central Limit Theorem for Wigner Matrices.” Electronic Journal of Probability, vol. 29, 191, Institute of Mathematical Statistics, 2024, doi:10.1214/24-EJP1247. short: J. Reker, Electronic Journal of Probability 29 (2024). corr_author: '1' date_created: 2025-01-05T23:01:58Z date_published: 2024-12-20T00:00:00Z date_updated: 2025-09-09T11:59:15Z day: '20' ddc: - '510' department: - _id: LaEr doi: 10.1214/24-EJP1247 ec_funded: 1 external_id: arxiv: - '2307.11028' isi: - '001381599200001' file: - access_level: open_access checksum: 67178feaa8630a332599d3037a3fe70e content_type: application/pdf creator: dernst date_created: 2025-01-08T08:44:03Z date_updated: 2025-01-08T08:44:03Z file_id: '18773' file_name: 2024_ElectrJournProbability_Reker.pdf file_size: 812428 relation: main_file success: 1 file_date_updated: 2025-01-08T08:44:03Z has_accepted_license: '1' intvolume: ' 29' isi: 1 language: - iso: eng month: '12' oa: 1 oa_version: Published Version project: - _id: 62796744-2b32-11ec-9570-940b20777f1d call_identifier: H2020 grant_number: '101020331' name: Random matrices beyond Wigner-Dyson-Mehta publication: Electronic Journal of Probability publication_identifier: eissn: - 1083-6489 publication_status: published publisher: Institute of Mathematical Statistics quality_controlled: '1' related_material: record: - id: '17173' relation: earlier_version status: public scopus_import: '1' status: public title: Multi-point functional central limit theorem for Wigner matrices tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 29 year: '2024' ...