---
OA_type: closed access
_id: '18599'
abstract:
- lang: eng
text: "Hypernode logic can reason about the prefix relation on stutter-reduced finite
traces through the stutter-reduced prefix predicate. We increase the expressiveness
of hypernode logic in two ways. First, we split the stutter-reduced prefix predicate
into an explicit stutter-reduction operator and the classical prefix predicate
on words. This change gives hypernode logic the ability to combine synchronous
and asynchronous reasoning by explicitly stating which parts of traces can stutter.
Second, we allow the use of regular expressions in formulas to reason about the
structure of traces. This change enables hypernode logic to describe a mixture
of trace properties and hyperproperties.\r\n\r\nWe show how to translate extended
hypernode logic formulas into multi-track automata, which are automata that read
multiple input words. Then we describe a fully online monitoring algorithm for
monitoring k-safety hyperproperties specified in the logic. We have implemented
the monitoring algorithm, and evaluated it on monitoring synchronous and asynchronous
versions of observational determinism, and on checking the privacy preservation
by compiler optimizations."
acknowledgement: This work was supported in part by the ERC-2020-AdG 101020093, and
by the Austrian Science Fund (FWF) SFB project SpyCoDe F8502.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Marek
full_name: Chalupa, Marek
id: 87e34708-d6c6-11ec-9f5b-9391e7be2463
last_name: Chalupa
- first_name: Thomas A
full_name: Henzinger, Thomas A
id: 40876CD8-F248-11E8-B48F-1D18A9856A87
last_name: Henzinger
orcid: 0000-0002-2985-7724
- first_name: Ana
full_name: Oliveira da Costa, Ana
id: f347ec37-6676-11ee-b395-a888cb7b4fb4
last_name: Oliveira da Costa
orcid: 0000-0002-8741-5799
citation:
ama: 'Chalupa M, Henzinger TA, Oliveira da Costa A. Monitoring extended hypernode
logic. In: Integrated Formal Methods. Vol 15234. Springer Nature; 2024:151-171.
doi:10.1007/978-3-031-76554-4_9'
apa: Chalupa, M., Henzinger, T. A., & Oliveira da Costa, A. (2024). Monitoring
extended hypernode logic. In Integrated Formal Methods (Vol. 15234, pp.
151–171). Springer Nature. https://doi.org/10.1007/978-3-031-76554-4_9
chicago: Chalupa, Marek, Thomas A Henzinger, and Ana Oliveira da Costa. “Monitoring
Extended Hypernode Logic.” In Integrated Formal Methods, 15234:151–71.
Springer Nature, 2024. https://doi.org/10.1007/978-3-031-76554-4_9.
ieee: M. Chalupa, T. A. Henzinger, and A. Oliveira da Costa, “Monitoring extended
hypernode logic,” in Integrated Formal Methods, 2024, vol. 15234, pp. 151–171.
ista: Chalupa M, Henzinger TA, Oliveira da Costa A. 2024. Monitoring extended hypernode
logic. Integrated Formal Methods. , LNCS, vol. 15234, 151–171.
mla: Chalupa, Marek, et al. “Monitoring Extended Hypernode Logic.” Integrated
Formal Methods, vol. 15234, Springer Nature, 2024, pp. 151–71, doi:10.1007/978-3-031-76554-4_9.
short: M. Chalupa, T.A. Henzinger, A. Oliveira da Costa, in:, Integrated Formal
Methods, Springer Nature, 2024, pp. 151–171.
corr_author: '1'
date_created: 2024-12-01T23:01:52Z
date_published: 2024-11-13T00:00:00Z
date_updated: 2025-09-08T14:47:22Z
day: '13'
department:
- _id: ToHe
doi: 10.1007/978-3-031-76554-4_9
ec_funded: 1
external_id:
isi:
- '001416640500009'
intvolume: ' 15234'
isi: 1
language:
- iso: eng
month: '11'
oa_version: None
page: 151-171
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
call_identifier: H2020
grant_number: '101020093'
name: Vigilant Algorithmic Monitoring of Software
- _id: 34a1b658-11ca-11ed-8bc3-c75229f0241e
grant_number: F8502
name: Interface Theory for Security and Privacy
publication: Integrated Formal Methods
publication_identifier:
eissn:
- 1611-3349
isbn:
- '9783031765537'
issn:
- 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Monitoring extended hypernode logic
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 15234
year: '2024'
...
---
OA_place: repository
OA_type: green
_id: '18600'
abstract:
- lang: eng
text: 'The analysis of formal models that include quantitative aspects such as timing
or probabilistic choices is performed by quantitative verification tools. Broad
and mature tool support is available for computing basic properties such as expected
rewards on basic models such as Markov chains. Previous editions of QComp, the
comparison of tools for the analysis of quantitative formal models, focused on
this setting. Many application scenarios, however, require more advanced property
types such as LTL and parameter synthesis queries as well as advanced models like
stochastic games and partially observable MDPs. For these, tool support is in
its infancy today. This paper presents the outcomes of QComp 2023: a survey of
the state of the art in quantitative verification tool support for advanced property
types and models. With tools ranging from first research prototypes to well-supported
integrations into established toolsets, this report highlights today’s active
areas and tomorrow’s challenges in tool-focused research for quantitative verification.'
acknowledgement: The authors are ordered alphabetically. This work was supported by
DFG RTG 2236/2 (UnRAVeL) and DFG project TRR 248 (CPEC, ID 389792660), by the EU
under MSCA grant agreements 101008233 (MISSION), 101034413 (IST-BRIDGE), and 101067199
(ProSVED), by ERC Starting Grant 101077178 (DEUCE), ERC Consolidator Grant 864075
(CAESAR), and ERC Advanced Grant 834115 (FUN2MODEL), by GAČR grant GA23-06963S (VESCAA),
by National Science Foundation grant 1856733, by NextGenerationEU project D53D23008400006
(SMARTITUDE), and by NWO VENI grant 639.021.754.
alternative_title:
- LNCS
article_processing_charge: No
arxiv: 1
author:
- first_name: Roman
full_name: Andriushchenko, Roman
last_name: Andriushchenko
- first_name: Alexander
full_name: Bork, Alexander
last_name: Bork
- first_name: Carlos E.
full_name: Budde, Carlos E.
last_name: Budde
- first_name: Milan
full_name: Češka, Milan
last_name: Češka
- first_name: Kush
full_name: Grover, Kush
last_name: Grover
- first_name: Ernst Moritz
full_name: Hahn, Ernst Moritz
last_name: Hahn
- first_name: Arnd
full_name: Hartmanns, Arnd
last_name: Hartmanns
- first_name: Bryant
full_name: Israelsen, Bryant
last_name: Israelsen
- first_name: Nils
full_name: Jansen, Nils
last_name: Jansen
- first_name: Joshua
full_name: Jeppson, Joshua
last_name: Jeppson
- first_name: Sebastian
full_name: Junges, Sebastian
last_name: Junges
- first_name: Maximilian A.
full_name: Köhl, Maximilian A.
last_name: Köhl
- first_name: Bettina
full_name: Könighofer, Bettina
last_name: Könighofer
- first_name: Jan
full_name: Kretinsky, Jan
id: 44CEF464-F248-11E8-B48F-1D18A9856A87
last_name: Kretinsky
orcid: 0000-0002-8122-2881
- first_name: Tobias
full_name: Meggendorfer, Tobias
id: b21b0c15-30a2-11eb-80dc-f13ca25802e1
last_name: Meggendorfer
orcid: 0000-0002-1712-2165
- first_name: David
full_name: Parker, David
last_name: Parker
- first_name: Stefan
full_name: Pranger, Stefan
last_name: Pranger
- first_name: Tim
full_name: Quatmann, Tim
last_name: Quatmann
- first_name: Enno
full_name: Ruijters, Enno
last_name: Ruijters
- first_name: Landon
full_name: Taylor, Landon
last_name: Taylor
- first_name: Matthias
full_name: Volk, Matthias
last_name: Volk
- first_name: Maximilian
full_name: Weininger, Maximilian
id: 02ab0197-cc70-11ed-ab61-918e71f56881
last_name: Weininger
- first_name: Zhen
full_name: Zhang, Zhen
last_name: Zhang
citation:
ama: 'Andriushchenko R, Bork A, Budde CE, et al. Tools at the Frontiers of Quantitative
Verification: QComp 2023 Competition Report. In: TOOLympics Challenge 2023.
Vol 14550. Springer Nature; 2024:90-146. doi:10.1007/978-3-031-67695-6_4'
apa: 'Andriushchenko, R., Bork, A., Budde, C. E., Češka, M., Grover, K., Hahn, E.
M., … Zhang, Z. (2024). Tools at the Frontiers of Quantitative Verification: QComp
2023 Competition Report. In TOOLympics Challenge 2023 (Vol. 14550, pp.
90–146). Springer Nature. https://doi.org/10.1007/978-3-031-67695-6_4'
chicago: 'Andriushchenko, Roman, Alexander Bork, Carlos E. Budde, Milan Češka, Kush
Grover, Ernst Moritz Hahn, Arnd Hartmanns, et al. “Tools at the Frontiers of Quantitative
Verification: QComp 2023 Competition Report.” In TOOLympics Challenge 2023,
14550:90–146. Springer Nature, 2024. https://doi.org/10.1007/978-3-031-67695-6_4.'
ieee: 'R. Andriushchenko et al., “Tools at the Frontiers of Quantitative
Verification: QComp 2023 Competition Report,” in TOOLympics Challenge 2023,
2024, vol. 14550, pp. 90–146.'
ista: 'Andriushchenko R, Bork A, Budde CE, Češka M, Grover K, Hahn EM, Hartmanns
A, Israelsen B, Jansen N, Jeppson J, Junges S, Köhl MA, Könighofer B, Kretinsky
J, Meggendorfer T, Parker D, Pranger S, Quatmann T, Ruijters E, Taylor L, Volk
M, Weininger M, Zhang Z. 2024. Tools at the Frontiers of Quantitative Verification:
QComp 2023 Competition Report. TOOLympics Challenge 2023. , LNCS, vol. 14550,
90–146.'
mla: 'Andriushchenko, Roman, et al. “Tools at the Frontiers of Quantitative Verification:
QComp 2023 Competition Report.” TOOLympics Challenge 2023, vol. 14550,
Springer Nature, 2024, pp. 90–146, doi:10.1007/978-3-031-67695-6_4.'
short: R. Andriushchenko, A. Bork, C.E. Budde, M. Češka, K. Grover, E.M. Hahn, A.
Hartmanns, B. Israelsen, N. Jansen, J. Jeppson, S. Junges, M.A. Köhl, B. Könighofer,
J. Kretinsky, T. Meggendorfer, D. Parker, S. Pranger, T. Quatmann, E. Ruijters,
L. Taylor, M. Volk, M. Weininger, Z. Zhang, in:, TOOLympics Challenge 2023, Springer
Nature, 2024, pp. 90–146.
date_created: 2024-12-01T23:01:53Z
date_published: 2024-11-01T00:00:00Z
date_updated: 2025-09-08T14:45:11Z
day: '01'
department:
- _id: KrCh
doi: 10.1007/978-3-031-67695-6_4
external_id:
arxiv:
- '2405.13583'
isi:
- '001434957500004'
intvolume: ' 14550'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
url: ' https://doi.org/10.48550/arXiv.2405.13583'
month: '11'
oa: 1
oa_version: Preprint
page: 90-146
publication: TOOLympics Challenge 2023
publication_identifier:
eissn:
- 1611-3349
isbn:
- '9783031676949'
issn:
- 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition
Report'
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 14550
year: '2024'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '18602'
abstract:
- lang: eng
text: Semiconductor quantum dots (QDs) in planar germanium (Ge) heterostructures
have emerged as front-runners for future hole-based quantum processors. Here,
we present strong coupling between a hole charge qubit, defined in a double quantum
dot (DQD) in planar Ge, and microwave photons in a high-impedance (Zr = 1.3 kΩ)
resonator based on an array of superconducting quantum interference devices (SQUIDs).
Our investigation reveals vacuum-Rabi splittings with coupling strengths up to
g0/2π = 260 MHz, and a cooperativity of C ~ 100, dependent on DQD tuning. Furthermore,
utilizing the frequency tunability of our resonator, we explore the quenched energy
splitting associated with strong Coulomb correlation effects in Ge QDs. The observed
enhanced coherence of the strongly correlated excited state signals the presence
of distinct symmetries within related spin functions, serving as a precursor to
the strong coupling between photons and spin-charge hybrid qubits in planar Ge.
This work paves the way towards coherent quantum connections between remote hole
qubits in planar Ge, required to scale up hole-based quantum processors.
acknowledgement: The authors thank Simone Frasca, Vincent Jouanny, Guillaume Beaulieu,
Camille Roy, Dominic Dahinden, Davide Lombardo, Daniel Chrastina, and Siddhart Gautam
for contributing to some cleanroom fabrication steps, the measurement setup, device
simulations, data analysis, and for the useful discussions. P.S. acknowledges support
from the Swiss National Science Foundation (SNSF) through the grants Ref. No. 200021
200418 and Ref. No. 206021_205335, and from the Swiss State Secretariat for Education,
Research and Innovation (SERI) under contract number 01042765 SEFRI MB22.00081.
W.J. acknowledges support from the EPFL QSE Postdoctoral Fellowship Grant. S.B.,
D.L., and P.S. acknowledge support from the NCCR Spin Qubit in Silicon (NCCR-SPIN)
Grant No. 51NF40-180604. M.J., G.K., G.I., and S.C. acknowledge support from the
Horizon Europe Project IGNITE ID 101070193. G.K. acknowledges support from the FWF
via the P32235 and I05060 projects.
article_number: '10177'
article_processing_charge: Yes
article_type: original
author:
- first_name: Franco
full_name: De Palma, Franco
last_name: De Palma
- first_name: Fabian
full_name: Oppliger, Fabian
last_name: Oppliger
- first_name: Wonjin
full_name: Jang, Wonjin
last_name: Jang
- first_name: Stefano
full_name: Bosco, Stefano
last_name: Bosco
- first_name: Marian
full_name: Janik, Marian
id: 396A1950-F248-11E8-B48F-1D18A9856A87
last_name: Janik
orcid: 0009-0003-9037-8831
- first_name: Stefano
full_name: Calcaterra, Stefano
last_name: Calcaterra
- first_name: Georgios
full_name: Katsaros, Georgios
id: 38DB5788-F248-11E8-B48F-1D18A9856A87
last_name: Katsaros
orcid: 0000-0001-8342-202X
- first_name: Giovanni
full_name: Isella, Giovanni
last_name: Isella
- first_name: Daniel
full_name: Loss, Daniel
last_name: Loss
- first_name: Pasquale
full_name: Scarlino, Pasquale
last_name: Scarlino
citation:
ama: De Palma F, Oppliger F, Jang W, et al. Strong hole-photon coupling in planar
Ge for probing charge degree and strongly correlated states. Nature Communications.
2024;15. doi:10.1038/s41467-024-54520-7
apa: De Palma, F., Oppliger, F., Jang, W., Bosco, S., Janik, M., Calcaterra, S.,
… Scarlino, P. (2024). Strong hole-photon coupling in planar Ge for probing charge
degree and strongly correlated states. Nature Communications. Springer
Nature. https://doi.org/10.1038/s41467-024-54520-7
chicago: De Palma, Franco, Fabian Oppliger, Wonjin Jang, Stefano Bosco, Marian Janik,
Stefano Calcaterra, Georgios Katsaros, Giovanni Isella, Daniel Loss, and Pasquale
Scarlino. “Strong Hole-Photon Coupling in Planar Ge for Probing Charge Degree
and Strongly Correlated States.” Nature Communications. Springer Nature,
2024. https://doi.org/10.1038/s41467-024-54520-7.
ieee: F. De Palma et al., “Strong hole-photon coupling in planar Ge for probing
charge degree and strongly correlated states,” Nature Communications, vol.
15. Springer Nature, 2024.
ista: De Palma F, Oppliger F, Jang W, Bosco S, Janik M, Calcaterra S, Katsaros G,
Isella G, Loss D, Scarlino P. 2024. Strong hole-photon coupling in planar Ge for
probing charge degree and strongly correlated states. Nature Communications. 15,
10177.
mla: De Palma, Franco, et al. “Strong Hole-Photon Coupling in Planar Ge for Probing
Charge Degree and Strongly Correlated States.” Nature Communications, vol.
15, 10177, Springer Nature, 2024, doi:10.1038/s41467-024-54520-7.
short: F. De Palma, F. Oppliger, W. Jang, S. Bosco, M. Janik, S. Calcaterra, G.
Katsaros, G. Isella, D. Loss, P. Scarlino, Nature Communications 15 (2024).
date_created: 2024-12-01T23:01:53Z
date_published: 2024-12-01T00:00:00Z
date_updated: 2025-09-08T14:46:06Z
day: '01'
ddc:
- '530'
department:
- _id: GeKa
doi: 10.1038/s41467-024-54520-7
external_id:
isi:
- '001362684200001'
pmid:
- '39580488'
file:
- access_level: open_access
checksum: ef9f99a84089c388904cc8aa8d89c55a
content_type: application/pdf
creator: dernst
date_created: 2024-12-03T11:00:15Z
date_updated: 2024-12-03T11:00:15Z
file_id: '18611'
file_name: 2024_NatureComm_dePalma.pdf
file_size: 5288092
relation: main_file
success: 1
file_date_updated: 2024-12-03T11:00:15Z
has_accepted_license: '1'
intvolume: ' 15'
isi: 1
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 237B3DA4-32DE-11EA-91FC-C7463DDC885E
call_identifier: FWF
grant_number: P32235
name: Towards scalable hut wire quantum devices
- _id: c0977eea-5a5b-11eb-8a69-a862db0cf4d1
grant_number: I05060
name: High impedance circuit quantum electrodynamics with hole spins
publication: Nature Communications
publication_identifier:
eissn:
- 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Strong hole-photon coupling in planar Ge for probing charge degree and strongly
correlated states
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 15
year: '2024'
...
---
APC_amount: 6248,82 EUR
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '18603'
abstract:
- lang: eng
text: It is widely believed that information storage in neuronal circuits involves
nanoscopic structural changes at synapses, resulting in the formation of synaptic
engrams. However, direct evidence for this hypothesis is lacking. To test this
conjecture, we combined chemical potentiation, functional analysis by paired pre-postsynaptic
recordings, and structural analysis by electron microscopy (EM) and freeze-fracture
replica labeling (FRL) at the rodent hippocampal mossy fiber synapse, a key synapse
in the trisynaptic circuit of the hippocampus. Biophysical analysis of synaptic
transmission revealed that forskolin-induced chemical potentiation increased the
readily releasable vesicle pool size and vesicular release probability by 146%
and 49%, respectively. Structural analysis of mossy fiber synapses by EM and FRL
demonstrated an increase in the number of vesicles close to the plasma membrane
and the number of clusters of the priming protein Munc13-1, indicating an increase
in the number of both docked and primed vesicles. Furthermore, FRL analysis revealed
a significant reduction of the distance between Munc13-1 and CaV2.1 Ca2+ channels,
suggesting reconfiguration of the channel-vesicle coupling nanotopography. Our
results indicate that presynaptic plasticity is associated with structural reorganization
of active zones. We propose that changes in potential nanoscopic organization
at synaptic vesicle release sites may be correlates of learning and memory at
a plastic central synapse.
acknowledged_ssus:
- _id: EM-Fac
- _id: PreCl
acknowledgement: "We thank Carolina Borges-Merjane, Jing-Jing Chen, Katharina Lichter,
and Samuel Young for critically reading the manuscript; the Electron Microscopy
Facility of ISTA, in particular Vanessa Zheden, for extensive support, advice, and
experimental assistance; the Preclinical Facility of ISTA, in particular Victoria
Wimmer and Michael Schunn, for experimental assistance; Florian Marr and Christina
Altmutter for technical support; Alois Schlögl for help with analysis; and Eleftheria
Kralli-Beller for manuscript editing. We also thank Cordelia Imig for providing
Munc13-1cKO-Munc13-2/3(−/−) mutant mice. Part of the work has been published in
O.K.’s thesis in partial fulfillment of the requirements for the degree of Doctor
of Philosophy.\r\nThis project received funding from the European Research Council
and European Union’s Horizon 2020 research and innovation programme (ERC 692692
to P.J.; https://cordis.europa.eu/project/id/692692/de) and from the Fond zur Förderung
der Wissenschaftlichen Forschung (Z312-B27 Wittgenstein award to P.J., https://www.fwf.ac.at/en/funding/portfolio/projects/fwf-wittgenstein-award;
W1205-B09 and P36232-B to P.J., https://www.fwf.ac.at/en/funding; I6166-B to R.S.;
https://www.fwf.ac.at/en/funding). The funders had no role in study design, data
collection and analysis, decision to publish, or preparation of the manuscript."
article_number: e3002879
article_processing_charge: Yes
article_type: original
author:
- first_name: Olena
full_name: Kim, Olena
id: 3F8ABDDA-F248-11E8-B48F-1D18A9856A87
last_name: Kim
orcid: 0000-0003-2344-1039
- first_name: Yuji
full_name: Okamoto, Yuji
id: 3337E116-F248-11E8-B48F-1D18A9856A87
last_name: Okamoto
orcid: 0000-0003-0408-6094
- first_name: Walter
full_name: Kaufmann, Walter
id: 3F99E422-F248-11E8-B48F-1D18A9856A87
last_name: Kaufmann
orcid: 0000-0001-9735-5315
- first_name: Nils
full_name: Brose, Nils
last_name: Brose
- first_name: Ryuichi
full_name: Shigemoto, Ryuichi
id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
last_name: Shigemoto
orcid: 0000-0001-8761-9444
- first_name: Peter M
full_name: Jonas, Peter M
id: 353C1B58-F248-11E8-B48F-1D18A9856A87
last_name: Jonas
orcid: 0000-0001-5001-4804
citation:
ama: Kim O, Okamoto Y, Kaufmann W, Brose N, Shigemoto R, Jonas PM. Presynaptic cAMP-PKA-mediated
potentiation induces reconfiguration of synaptic vesicle pools and channel-vesicle
coupling at hippocampal mossy fiber boutons. PLoS Biology. 2024;22(11).
doi:10.1371/journal.pbio.3002879
apa: Kim, O., Okamoto, Y., Kaufmann, W., Brose, N., Shigemoto, R., & Jonas,
P. M. (2024). Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration
of synaptic vesicle pools and channel-vesicle coupling at hippocampal mossy fiber
boutons. PLoS Biology. Public Library of Science. https://doi.org/10.1371/journal.pbio.3002879
chicago: Kim, Olena, Yuji Okamoto, Walter Kaufmann, Nils Brose, Ryuichi Shigemoto,
and Peter M Jonas. “Presynaptic CAMP-PKA-Mediated Potentiation Induces Reconfiguration
of Synaptic Vesicle Pools and Channel-Vesicle Coupling at Hippocampal Mossy Fiber
Boutons.” PLoS Biology. Public Library of Science, 2024. https://doi.org/10.1371/journal.pbio.3002879.
ieee: O. Kim, Y. Okamoto, W. Kaufmann, N. Brose, R. Shigemoto, and P. M. Jonas,
“Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration of synaptic
vesicle pools and channel-vesicle coupling at hippocampal mossy fiber boutons,”
PLoS Biology, vol. 22, no. 11. Public Library of Science, 2024.
ista: Kim O, Okamoto Y, Kaufmann W, Brose N, Shigemoto R, Jonas PM. 2024. Presynaptic
cAMP-PKA-mediated potentiation induces reconfiguration of synaptic vesicle pools
and channel-vesicle coupling at hippocampal mossy fiber boutons. PLoS Biology.
22(11), e3002879.
mla: Kim, Olena, et al. “Presynaptic CAMP-PKA-Mediated Potentiation Induces Reconfiguration
of Synaptic Vesicle Pools and Channel-Vesicle Coupling at Hippocampal Mossy Fiber
Boutons.” PLoS Biology, vol. 22, no. 11, e3002879, Public Library of Science,
2024, doi:10.1371/journal.pbio.3002879.
short: O. Kim, Y. Okamoto, W. Kaufmann, N. Brose, R. Shigemoto, P.M. Jonas, PLoS
Biology 22 (2024).
corr_author: '1'
date_created: 2024-12-01T23:01:54Z
date_published: 2024-11-18T00:00:00Z
date_updated: 2026-04-16T12:20:34Z
day: '18'
ddc:
- '570'
department:
- _id: PeJo
- _id: EM-Fac
- _id: RySh
doi: 10.1371/journal.pbio.3002879
ec_funded: 1
external_id:
isi:
- '001358568700003'
pmid:
- '39556620'
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creator: dernst
date_created: 2024-12-03T08:56:53Z
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file_name: 2024_PloSBio_Kim.pdf
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month: '11'
oa: 1
oa_version: Published Version
pmid: 1
project:
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call_identifier: H2020
grant_number: '692692'
name: Biophysics and circuit function of a giant cortical glutamatergic synapse
- _id: 25C5A090-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: Z00312
name: Synaptic communication in neuronal microcircuits
- _id: bd88be38-d553-11ed-ba76-81d5a70a6ef5
grant_number: P36232
name: Mechanisms of GABA release in hippocampal circuits
- _id: b1b85715-d554-11ed-a5ad-84a07fc9f18e
grant_number: I06166
name: Structural & functional basis of presynaptic plasticity
- _id: 25C3DBB6-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: W01205
name: Zellkommunikation in Gesundheit und Krankheit
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call_identifier: FWF
name: FWF Open Access Fund
publication: PLoS Biology
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issn:
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publication_status: published
publisher: Public Library of Science
quality_controlled: '1'
related_material:
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relation: research_data
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scopus_import: '1'
status: public
title: Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration of synaptic
vesicle pools and channel-vesicle coupling at hippocampal mossy fiber boutons
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 22
year: '2024'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '18604'
abstract:
- lang: eng
text: 'A face in a curve arrangement is called popular if it is bounded by the same
curve multiple times. Motivated by the automatic generation of curved nonogram
puzzles, we investigate possibilities to eliminate the popular faces in an arrangement
by inserting a single additional curve. This turns out to be NP-hard; however,
it becomes tractable when the number of popular faces is small: We present a randomized
FPT-time algorithm where the parameter is the number of popular faces.'
acknowledgement: "This work was initiated at the 16th European Research Week on Geometric
Graphs in Strobl in 2019. A.W. has been supported by the Austrian Science Fund (FWF):
W1230. S.T. has been funded by the Vienna Science and Technology Fund (WWTF) [10.47379/ICT19035]
and by the NWO Gravitation project NETWORKS under grant no. 024.002.003. Part of
the work was done while A.W. was emplyed at Graz University of Technology. Preliminary
versions of this work have been presented at the 38th European Workshop on Computational
Geometry (EuroCG\r\n2022) in Perugia [10] and at the 31st International Symposium
on Graph Drawing and Network Visualization (GD 2023) in Isola delle Femmine [11]."
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Phoebe
full_name: De Nooijer, Phoebe
last_name: De Nooijer
- first_name: Soeren
full_name: Terziadis, Soeren
last_name: Terziadis
- first_name: Alexandra
full_name: Weinberger, Alexandra
last_name: Weinberger
- first_name: Zuzana
full_name: Masárová, Zuzana
id: 45CFE238-F248-11E8-B48F-1D18A9856A87
last_name: Masárová
orcid: 0000-0002-6660-1322
- first_name: Tamara
full_name: Mchedlidze, Tamara
last_name: Mchedlidze
- first_name: Maarten
full_name: Löffler, Maarten
last_name: Löffler
- first_name: Günter
full_name: Rote, Günter
last_name: Rote
citation:
ama: De Nooijer P, Terziadis S, Weinberger A, et al. Removing popular faces in curve
arrangements. Journal of Graph Algorithms and Applications. 2024;28(2):47-82.
doi:10.7155/jgaa.v28i2.2988
apa: De Nooijer, P., Terziadis, S., Weinberger, A., Masárová, Z., Mchedlidze, T.,
Löffler, M., & Rote, G. (2024). Removing popular faces in curve arrangements.
Journal of Graph Algorithms and Applications. Brown University. https://doi.org/10.7155/jgaa.v28i2.2988
chicago: De Nooijer, Phoebe, Soeren Terziadis, Alexandra Weinberger, Zuzana Masárová,
Tamara Mchedlidze, Maarten Löffler, and Günter Rote. “Removing Popular Faces in
Curve Arrangements.” Journal of Graph Algorithms and Applications. Brown
University, 2024. https://doi.org/10.7155/jgaa.v28i2.2988.
ieee: P. De Nooijer et al., “Removing popular faces in curve arrangements,”
Journal of Graph Algorithms and Applications, vol. 28, no. 2. Brown University,
pp. 47–82, 2024.
ista: De Nooijer P, Terziadis S, Weinberger A, Masárová Z, Mchedlidze T, Löffler
M, Rote G. 2024. Removing popular faces in curve arrangements. Journal of Graph
Algorithms and Applications. 28(2), 47–82.
mla: De Nooijer, Phoebe, et al. “Removing Popular Faces in Curve Arrangements.”
Journal of Graph Algorithms and Applications, vol. 28, no. 2, Brown University,
2024, pp. 47–82, doi:10.7155/jgaa.v28i2.2988.
short: P. De Nooijer, S. Terziadis, A. Weinberger, Z. Masárová, T. Mchedlidze, M.
Löffler, G. Rote, Journal of Graph Algorithms and Applications 28 (2024) 47–82.
corr_author: '1'
date_created: 2024-12-01T23:01:54Z
date_published: 2024-11-03T00:00:00Z
date_updated: 2024-12-03T09:49:18Z
day: '03'
ddc:
- '510'
department:
- _id: UlWa
- _id: HeEd
doi: 10.7155/jgaa.v28i2.2988
external_id:
arxiv:
- '2202.12175'
file:
- access_level: open_access
checksum: be611da6f9d790dc980d6fb7283fe889
content_type: application/pdf
creator: dernst
date_created: 2024-12-03T09:45:00Z
date_updated: 2024-12-03T09:45:00Z
file_id: '18609'
file_name: 2024_JourGraphAlgorithms_deNooijer.pdf
file_size: 1582493
relation: main_file
success: 1
file_date_updated: 2024-12-03T09:45:00Z
has_accepted_license: '1'
intvolume: ' 28'
issue: '2'
language:
- iso: eng
month: '11'
oa: 1
oa_version: Published Version
page: 47-82
publication: Journal of Graph Algorithms and Applications
publication_identifier:
issn:
- 1526-1719
publication_status: published
publisher: Brown University
quality_controlled: '1'
scopus_import: '1'
status: public
title: Removing popular faces in curve arrangements
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 28
year: '2024'
...
---
OA_type: closed access
_id: '18616'
abstract:
- lang: eng
text: By patterning an ultrathin layered structure with tiny wells, physicists have
created and imaged peculiar states known as quantum scars — revealing behaviour
that could be used to boost the performance of electronic devices.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Dmitry
full_name: Abanin, Dmitry
last_name: Abanin
- first_name: Maksym
full_name: Serbyn, Maksym
id: 47809E7E-F248-11E8-B48F-1D18A9856A87
last_name: Serbyn
orcid: 0000-0002-2399-5827
citation:
ama: Abanin D, Serbyn M. Quantum scars make their mark in graphene. Nature.
2024;635(8040):825-826. doi:10.1038/d41586-024-03649-y
apa: Abanin, D., & Serbyn, M. (2024). Quantum scars make their mark in graphene.
Nature. Springer Nature. https://doi.org/10.1038/d41586-024-03649-y
chicago: Abanin, Dmitry, and Maksym Serbyn. “Quantum Scars Make Their Mark in Graphene.”
Nature. Springer Nature, 2024. https://doi.org/10.1038/d41586-024-03649-y.
ieee: D. Abanin and M. Serbyn, “Quantum scars make their mark in graphene,” Nature,
vol. 635, no. 8040. Springer Nature, pp. 825–826, 2024.
ista: Abanin D, Serbyn M. 2024. Quantum scars make their mark in graphene. Nature.
635(8040), 825–826.
mla: Abanin, Dmitry, and Maksym Serbyn. “Quantum Scars Make Their Mark in Graphene.”
Nature, vol. 635, no. 8040, Springer Nature, 2024, pp. 825–26, doi:10.1038/d41586-024-03649-y.
short: D. Abanin, M. Serbyn, Nature 635 (2024) 825–826.
date_created: 2024-12-03T18:08:16Z
date_published: 2024-11-27T00:00:00Z
date_updated: 2025-09-08T14:57:35Z
day: '27'
department:
- _id: MaSe
doi: 10.1038/d41586-024-03649-y
external_id:
isi:
- '001367935000029'
pmid:
- '39604614'
intvolume: ' 635'
isi: 1
issue: '8040'
language:
- iso: eng
month: '11'
oa_version: None
page: 825-826
pmid: 1
publication: Nature
publication_identifier:
eissn:
- 1476-4687
issn:
- 0028-0836
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Quantum scars make their mark in graphene
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 635
year: '2024'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18617'
abstract:
- lang: eng
text: "Any complex-valued polynomial on (Rn)k decomposes into an algebraic combination
of O(n)-invariant polynomials and harmonic polynomials. This decomposition, separation
of variables, is granted to be unique if n≥2k−1. We prove that the condition n≥2k−1
is not only sufficient, but also necessary for uniqueness of the separation. Moreover,
we describe the structure of non-uniqueness of the separation in the boundary
cases when n=2k−2 and n=2k−3.\r\nFormally, we study the kernel of a multiplication
map ϕ carrying out separation of variables. We devise a general algorithmic procedure
for describing Ker ϕ in the restricted non-stable range k≤n<2k−1. In the full
non-stable range n<2k−1, we give formulas for highest weights of generators of
the kernel as well as formulas for its Hilbert series. Using the developed methods,
we obtain a list of highest weight vectors generating Ker ϕ."
acknowledgement: The author is sincerely grateful for guidance, advice and valuable
feedback from Roman Lávička.
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Daniel
full_name: Beďatš, Daniel
id: 78ea3cc9-31e7-11ee-aa02-a6169bbfe1f1
last_name: Beďatš
orcid: 0009-0004-1828-0044
citation:
ama: Beďatš D. Separation of variables for scalar-valued polynomials in the non-stable
range. Journal of Algebra. 2024;651:281-304. doi:10.1016/j.jalgebra.2024.04.013
apa: Beďatš, D. (2024). Separation of variables for scalar-valued polynomials in
the non-stable range. Journal of Algebra. Elsevier. https://doi.org/10.1016/j.jalgebra.2024.04.013
chicago: Beďatš, Daniel. “Separation of Variables for Scalar-Valued Polynomials
in the Non-Stable Range.” Journal of Algebra. Elsevier, 2024. https://doi.org/10.1016/j.jalgebra.2024.04.013.
ieee: D. Beďatš, “Separation of variables for scalar-valued polynomials in the non-stable
range,” Journal of Algebra, vol. 651. Elsevier, pp. 281–304, 2024.
ista: Beďatš D. 2024. Separation of variables for scalar-valued polynomials in the
non-stable range. Journal of Algebra. 651, 281–304.
mla: Beďatš, Daniel. “Separation of Variables for Scalar-Valued Polynomials in the
Non-Stable Range.” Journal of Algebra, vol. 651, Elsevier, 2024, pp. 281–304,
doi:10.1016/j.jalgebra.2024.04.013.
short: D. Beďatš, Journal of Algebra 651 (2024) 281–304.
corr_author: '1'
date_created: 2024-12-04T07:58:45Z
date_published: 2024-08-01T00:00:00Z
date_updated: 2025-09-08T14:57:00Z
day: '01'
ddc:
- '510'
department:
- _id: UlWa
doi: 10.1016/j.jalgebra.2024.04.013
external_id:
arxiv:
- '2309.11154'
isi:
- '001232775600001'
file:
- access_level: open_access
checksum: 7b01c89128ba16d5334dfab389a03878
content_type: application/pdf
creator: dernst
date_created: 2024-12-09T13:56:26Z
date_updated: 2024-12-09T13:56:26Z
file_id: '18638'
file_name: 2024_JourAlgebra_Bedats.pdf
file_size: 486969
relation: main_file
success: 1
file_date_updated: 2024-12-09T13:56:26Z
has_accepted_license: '1'
intvolume: ' 651'
isi: 1
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: 281-304
publication: Journal of Algebra
publication_identifier:
issn:
- 0021-8693
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Separation of variables for scalar-valued polynomials in the non-stable range
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 651
year: '2024'
...
---
OA_place: repository
OA_type: green
_id: '18627'
abstract:
- lang: eng
text: In contrast with extended Bloch waves, a single particle can become spatially
localized due to the so-called skin effect originating from non-Hermitian pumping.
Here we show that in kinetically constrained many-body systems, the skin effect
can instead manifest as dynamical amplification within the Fock space, beyond
the intuitively expected and previously studied particle localization and clustering.
We exemplify this non-Hermitian Fock skin effect in an asymmetric version of the
PXP model and show that it gives rise to ergodicity-breaking eigenstates—the non-Hermitian
analogs of quantum many-body scars. A distinguishing feature of these non-Hermitian
scars is their enhanced robustness against external disorders. We propose an experimental
realization of the non-Hermitian scar enhancement in a tilted Bose-Hubbard optical
lattice with laser-induced loss. Additionally, we implement digital simulations
of such scar enhancement on the IBM quantum processor. Our results show that the
Fock skin effect provides a powerful tool for creating robust nonergodic states
in generic open quantum systems.
acknowledgement: F. Q. and C. H. L. acknowledge support from the QEP2.0 Grant from
the Singapore National Research Foundation (Grant No. NRF2021-QEP2-02-P09) and the
Singapore MOE Tier-II Grant (Grant No. MOE-T2EP50222-0003). J.-Y. D. and Z. P. acknowledge
support by the Leverhulme Trust Research Leadership Award RL-2019-015. This project
has received funding from the European Union’s Horizon 2020 research and innovation
programme under the Marie Skłodowska-Curie Grant Agreement No. 101034413. This research
was supported in part by Grant No. NSF PHY-2309135 to the Kavli Institute for Theoretical
Physics (KITP). We acknowledge the use of IBM Quantum services for this work. The
views expressed are those of the authors and do not reflect the official policy
or position of IBM or the IBM Quantum team.
article_number: '216601'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Ruizhe
full_name: Shen, Ruizhe
last_name: Shen
- first_name: Fang
full_name: Qin, Fang
last_name: Qin
- first_name: Jean-Yves Marc
full_name: Desaules, Jean-Yves Marc
id: 6c292945-a610-11ed-9eec-c3be1ad62a80
last_name: Desaules
orcid: 0000-0002-3749-6375
- first_name: Zlatko
full_name: Papić, Zlatko
last_name: Papić
- first_name: Ching Hua
full_name: Lee, Ching Hua
last_name: Lee
citation:
ama: Shen R, Qin F, Desaules J-YM, Papić Z, Lee CH. Enhanced many-body quantum scars
from the non-hermitian fock skin effect. Physical Review Letters. 2024;133(21).
doi:10.1103/PhysRevLett.133.216601
apa: Shen, R., Qin, F., Desaules, J.-Y. M., Papić, Z., & Lee, C. H. (2024).
Enhanced many-body quantum scars from the non-hermitian fock skin effect. Physical
Review Letters. American Physical Society. https://doi.org/10.1103/PhysRevLett.133.216601
chicago: Shen, Ruizhe, Fang Qin, Jean-Yves Marc Desaules, Zlatko Papić, and Ching
Hua Lee. “Enhanced Many-Body Quantum Scars from the Non-Hermitian Fock Skin Effect.”
Physical Review Letters. American Physical Society, 2024. https://doi.org/10.1103/PhysRevLett.133.216601.
ieee: R. Shen, F. Qin, J.-Y. M. Desaules, Z. Papić, and C. H. Lee, “Enhanced many-body
quantum scars from the non-hermitian fock skin effect,” Physical Review Letters,
vol. 133, no. 21. American Physical Society, 2024.
ista: Shen R, Qin F, Desaules J-YM, Papić Z, Lee CH. 2024. Enhanced many-body quantum
scars from the non-hermitian fock skin effect. Physical Review Letters. 133(21),
216601.
mla: Shen, Ruizhe, et al. “Enhanced Many-Body Quantum Scars from the Non-Hermitian
Fock Skin Effect.” Physical Review Letters, vol. 133, no. 21, 216601, American
Physical Society, 2024, doi:10.1103/PhysRevLett.133.216601.
short: R. Shen, F. Qin, J.-Y.M. Desaules, Z. Papić, C.H. Lee, Physical Review Letters
133 (2024).
date_created: 2024-12-08T23:01:55Z
date_published: 2024-11-22T00:00:00Z
date_updated: 2026-06-10T07:52:52Z
day: '22'
department:
- _id: MaSe
doi: 10.1103/PhysRevLett.133.216601
ec_funded: 1
external_id:
arxiv:
- '2403.02395'
isi:
- '001369697800005'
pmid:
- '39642519'
intvolume: ' 133'
isi: 1
issue: '21'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.2403.02395
month: '11'
oa: 1
oa_version: Preprint
pmid: 1
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
call_identifier: H2020
grant_number: '101034413'
name: 'IST-BRIDGE: International postdoctoral program'
publication: Physical Review Letters
publication_identifier:
eissn:
- 1079-7114
issn:
- 0031-9007
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
related_material:
record:
- id: '17471'
relation: research_data
status: public
scopus_import: '1'
status: public
title: Enhanced many-body quantum scars from the non-hermitian fock skin effect
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 133
year: '2024'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '18628'
abstract:
- lang: eng
text: 'Arctic tidewater glaciers are retreating, serving as key indicators of global
warming. This study aims to assess how subglacial hydrology affects glacier front
retreat by comparing two glacier–fjord models of the Hansbreen glacier: one incorporating
a detailed subglacial hydrology model and another simplifying the subglacial discharge
to a single channel centered in the flow line. We first validate the subglacial
hydrology model by comparing its discharge channels with observations of plume
activity. Simulations conducted from April to December 2010 revealed that the
glacier front position aligns more closely with the observations in the coupled
model than in the simplified version. Furthermore, the mass loss due to calving
and submarine melting is greater in the coupled model, with the calving mass loss
reaching 6 Mt by the end of the simulation compared to 4 Mt in the simplified
model. These findings highlight the critical role of subglacial hydrology in predicting
glacier dynamics and emphasize the importance of detailed modeling in understanding
the responses of Arctic tidewater glaciers to climate change.'
acknowledgement: "E. De Andrés is supported by Margarita-Salas Grant No. UP2021-035
under the Next Generation-EU program. This research was also funded by grant PID2020-113051RB-C31
from MCIN/AEI/10.13039/501100011033/FEDER, UE.\r\nWe gratefully acknowledge Michal
Cieply and Dariusz Ignatiuk from the Faculty of Natural Sciences, University of
Silesia in Katowice, Poland, for their essential contributions to the Hansbreen
data collection. We also extend our sincere thanks to Waldemar Walczowski from the
Institute of Oceanology, Polish Academy of Sciences, Sopot, Poland, for providing
Hansbuka data. Additionally, we would like to thank two anonymous reviewers for
their constructive feedback, which helped to enhance the quality and clarity of
this work."
article_number: '193'
article_processing_charge: Yes
article_type: original
author:
- first_name: Eva
full_name: De Andrés, Eva
last_name: De Andrés
- first_name: José M
full_name: Muñoz Hermosilla, José M
id: e1037a6d-646e-11ef-b402-e0ed9ab0901e
last_name: Muñoz Hermosilla
- first_name: Kaian
full_name: Shahateet, Kaian
last_name: Shahateet
- first_name: Jaime
full_name: Otero, Jaime
last_name: Otero
citation:
ama: 'De Andrés E, Muñoz Hermosilla JM, Shahateet K, Otero J. The importance of
solving Subglaciar hydrology in modeling glacier retreat: A case study of Hansbreen,
Svalbard. Hydrology. 2024;11(11). doi:10.3390/hydrology11110193'
apa: 'De Andrés, E., Muñoz Hermosilla, J. M., Shahateet, K., & Otero, J. (2024).
The importance of solving Subglaciar hydrology in modeling glacier retreat: A
case study of Hansbreen, Svalbard. Hydrology. MDPI. https://doi.org/10.3390/hydrology11110193'
chicago: 'De Andrés, Eva, José M Muñoz Hermosilla, Kaian Shahateet, and Jaime Otero.
“The Importance of Solving Subglaciar Hydrology in Modeling Glacier Retreat: A
Case Study of Hansbreen, Svalbard.” Hydrology. MDPI, 2024. https://doi.org/10.3390/hydrology11110193.'
ieee: 'E. De Andrés, J. M. Muñoz Hermosilla, K. Shahateet, and J. Otero, “The importance
of solving Subglaciar hydrology in modeling glacier retreat: A case study of Hansbreen,
Svalbard,” Hydrology, vol. 11, no. 11. MDPI, 2024.'
ista: 'De Andrés E, Muñoz Hermosilla JM, Shahateet K, Otero J. 2024. The importance
of solving Subglaciar hydrology in modeling glacier retreat: A case study of Hansbreen,
Svalbard. Hydrology. 11(11), 193.'
mla: 'De Andrés, Eva, et al. “The Importance of Solving Subglaciar Hydrology in
Modeling Glacier Retreat: A Case Study of Hansbreen, Svalbard.” Hydrology,
vol. 11, no. 11, 193, MDPI, 2024, doi:10.3390/hydrology11110193.'
short: E. De Andrés, J.M. Muñoz Hermosilla, K. Shahateet, J. Otero, Hydrology 11
(2024).
corr_author: '1'
date_created: 2024-12-08T23:01:55Z
date_published: 2024-11-12T00:00:00Z
date_updated: 2024-12-09T09:43:48Z
day: '12'
ddc:
- '550'
department:
- _id: FrPe
doi: 10.3390/hydrology11110193
file:
- access_level: open_access
checksum: 0665c5bfca97782bf0b041f23dd7e8d7
content_type: application/pdf
creator: dernst
date_created: 2024-12-09T09:43:33Z
date_updated: 2024-12-09T09:43:33Z
file_id: '18635'
file_name: 2024_Hydrology_deAndres.pdf
file_size: 5709093
relation: main_file
success: 1
file_date_updated: 2024-12-09T09:43:33Z
has_accepted_license: '1'
intvolume: ' 11'
issue: '11'
language:
- iso: eng
month: '11'
oa: 1
oa_version: Published Version
publication: Hydrology
publication_identifier:
eissn:
- 2306-5338
publication_status: published
publisher: MDPI
quality_controlled: '1'
related_material:
record:
- id: '18634'
relation: used_in_publication
status: public
scopus_import: '1'
status: public
title: 'The importance of solving Subglaciar hydrology in modeling glacier retreat:
A case study of Hansbreen, Svalbard'
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 11
year: '2024'
...
---
OA_place: repository
OA_type: green
_id: '18629'
abstract:
- lang: eng
text: We study a three-dimensional Gross-Pitaevskii equation that describes a static
impurity in a dipolar Bose-Einstein condensate. Our focus is on the interplay
between the shape of the impurity and the anisotropy of the medium manifested
in the energy and the density of the system. Without external confinement, properties
of the system are derived with basic analytical approaches. For a system in a
harmonic trap, the model is investigated numerically, using the split-step Crank-Nicolson
method. Our results demonstrate that the impurity self-energy is minimized when
its shape more closely aligns with the anisotropic character of the bath; in particular
a prolate deformed impurity aligned with the direction of the dipoles has the
smallest self-energy for a repulsive impurity. Our work complements studies of
impurities in Bose gases with zero-range interactions and paves the way for studies
of dipolar polarons with a Gross-Pitaevskii equation.
acknowledgement: 'The authors acknowledge that this material is based upon work supported
by the National Science Foundation/EPSCoR RII Track-1: Emergent Quantum Materials
and Technologies (EQUATE), Award No. OIA-2044049.'
article_number: '053317'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Neelam
full_name: Shukla, Neelam
last_name: Shukla
- first_name: Artem
full_name: Volosniev, Artem
id: 37D278BC-F248-11E8-B48F-1D18A9856A87
last_name: Volosniev
orcid: 0000-0003-0393-5525
- first_name: Jeremy R.
full_name: Armstrong, Jeremy R.
last_name: Armstrong
citation:
ama: Shukla N, Volosniev A, Armstrong JR. Anisotropic potential immersed in a dipolar
Bose-Einstein condensate. Physical Review A. 2024;110(5). doi:10.1103/PhysRevA.110.053317
apa: Shukla, N., Volosniev, A., & Armstrong, J. R. (2024). Anisotropic potential
immersed in a dipolar Bose-Einstein condensate. Physical Review A. American
Physical Society. https://doi.org/10.1103/PhysRevA.110.053317
chicago: Shukla, Neelam, Artem Volosniev, and Jeremy R. Armstrong. “Anisotropic
Potential Immersed in a Dipolar Bose-Einstein Condensate.” Physical Review
A. American Physical Society, 2024. https://doi.org/10.1103/PhysRevA.110.053317.
ieee: N. Shukla, A. Volosniev, and J. R. Armstrong, “Anisotropic potential immersed
in a dipolar Bose-Einstein condensate,” Physical Review A, vol. 110, no.
5. American Physical Society, 2024.
ista: Shukla N, Volosniev A, Armstrong JR. 2024. Anisotropic potential immersed
in a dipolar Bose-Einstein condensate. Physical Review A. 110(5), 053317.
mla: Shukla, Neelam, et al. “Anisotropic Potential Immersed in a Dipolar Bose-Einstein
Condensate.” Physical Review A, vol. 110, no. 5, 053317, American Physical
Society, 2024, doi:10.1103/PhysRevA.110.053317.
short: N. Shukla, A. Volosniev, J.R. Armstrong, Physical Review A 110 (2024).
date_created: 2024-12-08T23:01:55Z
date_published: 2024-11-18T00:00:00Z
date_updated: 2025-09-08T14:56:22Z
day: '18'
department:
- _id: MiLe
doi: 10.1103/PhysRevA.110.053317
external_id:
arxiv:
- '2406.00217'
isi:
- '001362623400019'
intvolume: ' 110'
isi: 1
issue: '5'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.2406.00217
month: '11'
oa: 1
oa_version: Preprint
publication: Physical Review A
publication_identifier:
eissn:
- 2469-9934
issn:
- 2469-9926
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Anisotropic potential immersed in a dipolar Bose-Einstein condensate
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 110
year: '2024'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '18630'
abstract:
- lang: eng
text: 'Markov chains are the de facto finite-state model for stochastic dynamical
systems, and Markov decision processes (MDPs) extend Markov chains by incorporating
non-deterministic behaviors. Given an MDP and rewards on states, a classical optimization
criterion is the maximal expected total reward where the MDP stops after T steps,
which can be computed by a simple dynamic programming algorithm. We consider a
natural generalization of the problem where the stopping times can be chosen according
to a probability distribution, such that the expected stopping time is T, to optimize
the expected total reward. Quite surprisingly we establish inter-reducibility
of the expected stopping-time problem for Markov chains with the Positivity problem
(which is related to the well-known Skolem problem), for which establishing either
decidability or undecidability would be a major breakthrough. Given the hardness
of the exact problem, we consider the approximate version of the problem: we show
that it can be solved in exponential time for Markov chains and in exponential
space for MDPs.'
acknowledgement: The authors are grateful to the anonymous reviewers of LICS 2021
and of a previous version of this paper for insightful comments that helped improving
the presentation. The research presented in this paper was partially supported by
the grant ERC CoG 863818 (ForM-SMArt).
alternative_title:
- LMCS
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Krishnendu
full_name: Chatterjee, Krishnendu
id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
last_name: Chatterjee
orcid: 0000-0002-4561-241X
- first_name: Laurent
full_name: Doyen, Laurent
last_name: Doyen
citation:
ama: Chatterjee K, Doyen L. Stochastic processes with expected stopping time. Logical
Methods in Computer Science. 2024;20(4):11:1-11:34. doi:10.46298/lmcs-20(4:11)2024
apa: Chatterjee, K., & Doyen, L. (2024). Stochastic processes with expected
stopping time. Logical Methods in Computer Science. EPI Sciences. https://doi.org/10.46298/lmcs-20(4:11)2024
chicago: Chatterjee, Krishnendu, and Laurent Doyen. “Stochastic Processes with Expected
Stopping Time.” Logical Methods in Computer Science. EPI Sciences, 2024.
https://doi.org/10.46298/lmcs-20(4:11)2024.
ieee: K. Chatterjee and L. Doyen, “Stochastic processes with expected stopping time,”
Logical Methods in Computer Science, vol. 20, no. 4. EPI Sciences, p. 11:1-11:34,
2024.
ista: Chatterjee K, Doyen L. 2024. Stochastic processes with expected stopping time.
Logical Methods in Computer Science. 20(4), 11:1-11:34.
mla: Chatterjee, Krishnendu, and Laurent Doyen. “Stochastic Processes with Expected
Stopping Time.” Logical Methods in Computer Science, vol. 20, no. 4, EPI
Sciences, 2024, p. 11:1-11:34, doi:10.46298/lmcs-20(4:11)2024.
short: K. Chatterjee, L. Doyen, Logical Methods in Computer Science 20 (2024) 11:1-11:34.
corr_author: '1'
date_created: 2024-12-08T23:01:56Z
date_published: 2024-11-12T00:00:00Z
date_updated: 2025-09-08T14:54:14Z
day: '12'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.46298/lmcs-20(4:11)2024
ec_funded: 1
external_id:
arxiv:
- '2104.07278'
isi:
- '001367316400002'
file:
- access_level: open_access
checksum: b3315c74ce18ce0a30ed33d8c9972992
content_type: application/pdf
creator: dernst
date_created: 2024-12-09T08:38:48Z
date_updated: 2024-12-09T08:38:48Z
file_id: '18633'
file_name: 2024_LMCS_Chatterjee.pdf
file_size: 416814
relation: main_file
success: 1
file_date_updated: 2024-12-09T08:38:48Z
has_accepted_license: '1'
intvolume: ' 20'
isi: 1
issue: '4'
language:
- iso: eng
month: '11'
oa: 1
oa_version: Published Version
page: 11:1-11:34
project:
- _id: 0599E47C-7A3F-11EA-A408-12923DDC885E
call_identifier: H2020
grant_number: '863818'
name: 'Formal Methods for Stochastic Models: Algorithms and Applications'
publication: Logical Methods in Computer Science
publication_identifier:
eissn:
- 1860-5974
publication_status: published
publisher: EPI Sciences
quality_controlled: '1'
related_material:
record:
- id: '10004'
relation: earlier_version
status: public
scopus_import: '1'
status: public
title: Stochastic processes with expected stopping time
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 20
year: '2024'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18645'
abstract:
- lang: eng
text: Gene expression during natural and induced reprogramming is controlled by
pioneer transcription factors that initiate transcription from closed chromatin.
Nr5a2 is a key pioneer factor that regulates zygotic genome activation in totipotent
embryos, pluripotency in embryonic stem cells and metabolism in adult tissues,
but the mechanism of its pioneer activity remains poorly understood. Here, we
present a cryo-electron microscopy structure of human NR5A2 bound to a nucleosome.
The structure shows that the conserved carboxy-terminal extension (CTE) loop of
the NR5A2 DNA-binding domain competes with a DNA minor groove anchor of the nucleosome
and releases entry-exit site DNA. Mutational analysis showed that NR5A2 D159 of
the CTE is dispensable for DNA binding but required for stable nucleosome association
and persistent DNA ‘unwrapping’. These findings suggest that NR5A2 belongs to
an emerging class of pioneer factors that can use DNA minor groove anchor competition
to destabilize nucleosomes and facilitate gene expression during reprogramming.
acknowledgement: 'We are very grateful to K. Abe, L. G. Hernandez, C. Kobayashi, K.
Straßer and M. Zaczek for their contributions and technical support. We thank N.
Thomä for advice on SeEN-seq. We are grateful to A. Musacchio for insightful discussions.
We thank J.-M. Peters for critical reading of the manuscript and all members of
K.T.’s laboratory for discussions. We thank T. Schäfer at the cryo-EM facility for
assistance in cryo-EM data collection, and R. H. Kim for sequencing at the NGS facility,
MPIB. K.T. is an Honorary Professor at the Department of Biology, Ludwig-Maximilians-University,
Munich. Funding: European Research Council grant ERC-CoG-818556 TotipotentZygotChrom
(K.T.). European Research Council grant ERC-StG-804098 ReplisomeBypass (K.D.). Max
Planck Society (K.T., K.D.).'
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Wataru
full_name: Kobayashi, Wataru
last_name: Kobayashi
- first_name: Anna H.
full_name: Sappler, Anna H.
last_name: Sappler
- first_name: Daniel
full_name: Bollschweiler, Daniel
last_name: Bollschweiler
- first_name: Maximilian
full_name: Kümmecke, Maximilian
last_name: Kümmecke
- first_name: Jérôme
full_name: Basquin, Jérôme
last_name: Basquin
- first_name: Eda Nur
full_name: Arslantas, Eda Nur
id: 36978b4e-2966-11ef-a72f-b3740ef1cd11
last_name: Arslantas
- first_name: Siwat
full_name: Ruangroengkulrith, Siwat
last_name: Ruangroengkulrith
- first_name: Renate
full_name: Hornberger, Renate
last_name: Hornberger
- first_name: Karl
full_name: Duderstadt, Karl
last_name: Duderstadt
- first_name: Kikuë
full_name: Tachibana, Kikuë
last_name: Tachibana
citation:
ama: Kobayashi W, Sappler AH, Bollschweiler D, et al. Nucleosome-bound NR5A2 structure
reveals pioneer factor mechanism by DNA minor groove anchor competition. Nature
Structural & Molecular Biology. 2024;31:757-766. doi:10.1038/s41594-024-01239-0
apa: Kobayashi, W., Sappler, A. H., Bollschweiler, D., Kümmecke, M., Basquin, J.,
Arslantas, E. N., … Tachibana, K. (2024). Nucleosome-bound NR5A2 structure reveals
pioneer factor mechanism by DNA minor groove anchor competition. Nature Structural
& Molecular Biology. Springer Nature. https://doi.org/10.1038/s41594-024-01239-0
chicago: Kobayashi, Wataru, Anna H. Sappler, Daniel Bollschweiler, Maximilian Kümmecke,
Jérôme Basquin, Eda Nur Arslantas, Siwat Ruangroengkulrith, Renate Hornberger,
Karl Duderstadt, and Kikuë Tachibana. “Nucleosome-Bound NR5A2 Structure Reveals
Pioneer Factor Mechanism by DNA Minor Groove Anchor Competition.” Nature Structural
& Molecular Biology. Springer Nature, 2024. https://doi.org/10.1038/s41594-024-01239-0.
ieee: W. Kobayashi et al., “Nucleosome-bound NR5A2 structure reveals pioneer
factor mechanism by DNA minor groove anchor competition,” Nature Structural
& Molecular Biology, vol. 31. Springer Nature, pp. 757–766, 2024.
ista: Kobayashi W, Sappler AH, Bollschweiler D, Kümmecke M, Basquin J, Arslantas
EN, Ruangroengkulrith S, Hornberger R, Duderstadt K, Tachibana K. 2024. Nucleosome-bound
NR5A2 structure reveals pioneer factor mechanism by DNA minor groove anchor competition.
Nature Structural & Molecular Biology. 31, 757–766.
mla: Kobayashi, Wataru, et al. “Nucleosome-Bound NR5A2 Structure Reveals Pioneer
Factor Mechanism by DNA Minor Groove Anchor Competition.” Nature Structural
& Molecular Biology, vol. 31, Springer Nature, 2024, pp. 757–66, doi:10.1038/s41594-024-01239-0.
short: W. Kobayashi, A.H. Sappler, D. Bollschweiler, M. Kümmecke, J. Basquin, E.N.
Arslantas, S. Ruangroengkulrith, R. Hornberger, K. Duderstadt, K. Tachibana, Nature
Structural & Molecular Biology 31 (2024) 757–766.
date_created: 2024-12-11T09:10:54Z
date_published: 2024-05-01T00:00:00Z
date_updated: 2024-12-11T10:56:35Z
day: '01'
doi: 10.1038/s41594-024-01239-0
extern: '1'
intvolume: ' 31'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1038/s41594-024-01239-0
month: '05'
oa: 1
oa_version: Published Version
page: 757-766
publication: Nature Structural & Molecular Biology
publication_identifier:
eissn:
- 1545-9985
issn:
- 1545-9993
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Nucleosome-bound NR5A2 structure reveals pioneer factor mechanism by DNA minor
groove anchor competition
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 31
year: '2024'
...
---
OA_type: closed access
_id: '18651'
abstract:
- lang: eng
text: Embryo axis formation begins with the localized expression of biochemical
signals, which organize cell movements and determine cell fate. A quail study
finds that tissue contraction and resulting long-range changes in tissue tension
restrict the area where these biochemical signals are expressed.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Naoya
full_name: Hino, Naoya
id: 5299a9ce-7679-11eb-a7bc-d1e62b936307
last_name: Hino
- first_name: Carolina
full_name: Santos Fernandes Lasbarrères Camelo, Carolina
id: 6347dca5-074c-11ed-af92-a80f860d9d5b
last_name: Santos Fernandes Lasbarrères Camelo
- first_name: Carl-Philipp J
full_name: Heisenberg, Carl-Philipp J
id: 39427864-F248-11E8-B48F-1D18A9856A87
last_name: Heisenberg
orcid: 0000-0002-0912-4566
citation:
ama: 'Hino N, Santos Fernandes Lasbarrères Camelo C, Heisenberg C-PJ. Development:
Turing mechanics. Current Biology. 2024;34(24):R1230-R1232. doi:10.1016/j.cub.2024.10.065'
apa: 'Hino, N., Santos Fernandes Lasbarrères Camelo, C., & Heisenberg, C.-P.
J. (2024). Development: Turing mechanics. Current Biology. Elsevier. https://doi.org/10.1016/j.cub.2024.10.065'
chicago: 'Hino, Naoya, Carolina Santos Fernandes Lasbarrères Camelo, and Carl-Philipp
J Heisenberg. “Development: Turing Mechanics.” Current Biology. Elsevier,
2024. https://doi.org/10.1016/j.cub.2024.10.065.'
ieee: 'N. Hino, C. Santos Fernandes Lasbarrères Camelo, and C.-P. J. Heisenberg,
“Development: Turing mechanics,” Current Biology, vol. 34, no. 24. Elsevier,
pp. R1230–R1232, 2024.'
ista: 'Hino N, Santos Fernandes Lasbarrères Camelo C, Heisenberg C-PJ. 2024. Development:
Turing mechanics. Current Biology. 34(24), R1230–R1232.'
mla: 'Hino, Naoya, et al. “Development: Turing Mechanics.” Current Biology,
vol. 34, no. 24, Elsevier, 2024, pp. R1230–32, doi:10.1016/j.cub.2024.10.065.'
short: N. Hino, C. Santos Fernandes Lasbarrères Camelo, C.-P.J. Heisenberg, Current
Biology 34 (2024) R1230–R1232.
corr_author: '1'
date_created: 2024-12-15T23:01:49Z
date_published: 2024-12-16T00:00:00Z
date_updated: 2025-09-09T11:51:15Z
day: '16'
department:
- _id: CaHe
doi: 10.1016/j.cub.2024.10.065
external_id:
isi:
- '001392077000001'
pmid:
- '39689690'
intvolume: ' 34'
isi: 1
issue: '24'
language:
- iso: eng
month: '12'
oa_version: None
page: R1230-R1232
pmid: 1
publication: Current Biology
publication_identifier:
eissn:
- 1879-0445
issn:
- 0960-9822
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Development: Turing mechanics'
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 34
year: '2024'
...
---
OA_type: closed access
_id: '18652'
abstract:
- lang: eng
text: 'Over the last 70 years, information theory and coding has enabled communication
technologies that have had an astounding impact on our lives. This is possible
due to the match between encoding/decoding strategies and corresponding channel
models. Traditional studies of channels have taken one of two extremes: Shannon-theoretic
models are inherently average-case in which channel noise is governed by a memoryless
stochastic process, whereas coding-theoretic (referred to as “Hamming”) models
take a worst-case, adversarial, view of the noise. However, for several existing
and emerging communication systems the Shannon/average-case view may be too optimistic,
whereas the Hamming/worstcase view may be too pessimistic. This monograph takes
up the challenge of studying adversarial channel models that lie between the Shannon
and Hamming extremes.'
article_processing_charge: No
article_type: original
author:
- first_name: Bikash Kumar
full_name: Dey, Bikash Kumar
last_name: Dey
- first_name: Sidharth
full_name: Jaggi, Sidharth
last_name: Jaggi
- first_name: Michael
full_name: Langberg, Michael
last_name: Langberg
- first_name: Anand D.
full_name: Sarwate, Anand D.
last_name: Sarwate
- first_name: Yihan
full_name: Zhang, Yihan
id: 2ce5da42-b2ea-11eb-bba5-9f264e9d002c
last_name: Zhang
orcid: 0000-0002-6465-6258
citation:
ama: 'Dey BK, Jaggi S, Langberg M, Sarwate AD, Zhang Y. Codes for adversaries: Between
worst-case and average-case jamming. Foundations and Trends in Communications
and Information Theory. 2024;21(3-4):300-588. doi:10.1561/0100000112'
apa: 'Dey, B. K., Jaggi, S., Langberg, M., Sarwate, A. D., & Zhang, Y. (2024).
Codes for adversaries: Between worst-case and average-case jamming. Foundations
and Trends in Communications and Information Theory. Now Publishers. https://doi.org/10.1561/0100000112'
chicago: 'Dey, Bikash Kumar, Sidharth Jaggi, Michael Langberg, Anand D. Sarwate,
and Yihan Zhang. “Codes for Adversaries: Between Worst-Case and Average-Case Jamming.”
Foundations and Trends in Communications and Information Theory. Now Publishers,
2024. https://doi.org/10.1561/0100000112.'
ieee: 'B. K. Dey, S. Jaggi, M. Langberg, A. D. Sarwate, and Y. Zhang, “Codes for
adversaries: Between worst-case and average-case jamming,” Foundations and
Trends in Communications and Information Theory, vol. 21, no. 3–4. Now Publishers,
pp. 300–588, 2024.'
ista: 'Dey BK, Jaggi S, Langberg M, Sarwate AD, Zhang Y. 2024. Codes for adversaries:
Between worst-case and average-case jamming. Foundations and Trends in Communications
and Information Theory. 21(3–4), 300–588.'
mla: 'Dey, Bikash Kumar, et al. “Codes for Adversaries: Between Worst-Case and Average-Case
Jamming.” Foundations and Trends in Communications and Information Theory,
vol. 21, no. 3–4, Now Publishers, 2024, pp. 300–588, doi:10.1561/0100000112.'
short: B.K. Dey, S. Jaggi, M. Langberg, A.D. Sarwate, Y. Zhang, Foundations and
Trends in Communications and Information Theory 21 (2024) 300–588.
corr_author: '1'
date_created: 2024-12-15T23:01:50Z
date_published: 2024-12-03T00:00:00Z
date_updated: 2024-12-16T10:38:44Z
day: '03'
department:
- _id: MaMo
doi: 10.1561/0100000112
intvolume: ' 21'
issue: 3-4
language:
- iso: eng
month: '12'
oa_version: None
page: 300-588
publication: Foundations and Trends in Communications and Information Theory
publication_identifier:
eissn:
- 1567-2328
issn:
- 1567-2190
publication_status: published
publisher: Now Publishers
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Codes for adversaries: Between worst-case and average-case jamming'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 21
year: '2024'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18653'
abstract:
- lang: eng
text: Charge sensing is a sensitive technique for probing quantum devices, of particular
importance for spin-qubit readout. To achieve good readout sensitivities, the
proximity of the charge sensor to the device to be measured is a necessity. However,
this proximity also means that the operation of the device affects, in turn, the
sensor tuning and ultimately the readout sensitivity. We present an approach for
compensating for this crosstalk effect allowing for the gate voltages of the measured
device to be swept in a 1-V × 1-V window while maintaining a sensor configuration
chosen by a Bayesian optimizer. Our algorithm will hopefully be a major contribution
to the suite of fully automated solutions required for the operation of large
quantum device architectures.
acknowledged_ssus:
- _id: NanoFab
acknowledgement: We thank Nicholas Sim for providing help with the experiment and
Sebastian Orbell for helpful discussions. This work was supported by the Royal Society,
the Engineering and Physical Sciences Research Council (EPSRC) National Quantum
Technology Hub in Networked Quantum Information Technology (Grant No. EP/M013243/1),
Quantum Technology Capital (Grant No. EP/N014995/1), the EPSRC Platform Grant (Grant
No. EP/R029229/1), the European Research Council (Grant Agreement No. 948932), the
Scientific Service Units of the Institute of Science and Technology Austria through
resources provided by the nanofabrication facility and, the FWF-I 05060 and HORIZON-RIA
101069515 projects.
article_number: '064026'
article_processing_charge: No
article_type: original
author:
- first_name: Joseph
full_name: Hickie, Joseph
last_name: Hickie
- first_name: Barnaby
full_name: Van Straaten, Barnaby
last_name: Van Straaten
- first_name: Federico
full_name: Fedele, Federico
last_name: Fedele
- first_name: Daniel
full_name: Jirovec, Daniel
id: 4C473F58-F248-11E8-B48F-1D18A9856A87
last_name: Jirovec
orcid: 0000-0002-7197-4801
- first_name: Andrea
full_name: Ballabio, Andrea
last_name: Ballabio
- first_name: Daniel
full_name: Chrastina, Daniel
last_name: Chrastina
- first_name: Giovanni
full_name: Isella, Giovanni
last_name: Isella
- first_name: Georgios
full_name: Katsaros, Georgios
id: 38DB5788-F248-11E8-B48F-1D18A9856A87
last_name: Katsaros
orcid: 0000-0001-8342-202X
- first_name: Natalia
full_name: Ares, Natalia
last_name: Ares
citation:
ama: Hickie J, Van Straaten B, Fedele F, et al. Automated long-range compensation
of an rf quantum dot sensor. Physical Review Applied. 2024;22(6). doi:10.1103/PhysRevApplied.22.064026
apa: Hickie, J., Van Straaten, B., Fedele, F., Jirovec, D., Ballabio, A., Chrastina,
D., … Ares, N. (2024). Automated long-range compensation of an rf quantum dot
sensor. Physical Review Applied. American Physical Society. https://doi.org/10.1103/PhysRevApplied.22.064026
chicago: Hickie, Joseph, Barnaby Van Straaten, Federico Fedele, Daniel Jirovec,
Andrea Ballabio, Daniel Chrastina, Giovanni Isella, Georgios Katsaros, and Natalia
Ares. “Automated Long-Range Compensation of an Rf Quantum Dot Sensor.” Physical
Review Applied. American Physical Society, 2024. https://doi.org/10.1103/PhysRevApplied.22.064026.
ieee: J. Hickie et al., “Automated long-range compensation of an rf quantum
dot sensor,” Physical Review Applied, vol. 22, no. 6. American Physical
Society, 2024.
ista: Hickie J, Van Straaten B, Fedele F, Jirovec D, Ballabio A, Chrastina D, Isella
G, Katsaros G, Ares N. 2024. Automated long-range compensation of an rf quantum
dot sensor. Physical Review Applied. 22(6), 064026.
mla: Hickie, Joseph, et al. “Automated Long-Range Compensation of an Rf Quantum
Dot Sensor.” Physical Review Applied, vol. 22, no. 6, 064026, American
Physical Society, 2024, doi:10.1103/PhysRevApplied.22.064026.
short: J. Hickie, B. Van Straaten, F. Fedele, D. Jirovec, A. Ballabio, D. Chrastina,
G. Isella, G. Katsaros, N. Ares, Physical Review Applied 22 (2024).
date_created: 2024-12-15T23:01:50Z
date_published: 2024-12-01T00:00:00Z
date_updated: 2025-09-09T11:47:52Z
day: '01'
ddc:
- '530'
department:
- _id: GeKa
doi: 10.1103/PhysRevApplied.22.064026
external_id:
isi:
- '001379155900003'
file:
- access_level: open_access
checksum: bc29a40819abc4969867b6cd6563f7ad
content_type: application/pdf
creator: dernst
date_created: 2024-12-16T11:13:48Z
date_updated: 2024-12-16T11:13:48Z
file_id: '18662'
file_name: 2024_PhysicalReviewApplied_Hickie.pdf
file_size: 3560132
relation: main_file
success: 1
file_date_updated: 2024-12-16T11:13:48Z
has_accepted_license: '1'
intvolume: ' 22'
isi: 1
issue: '6'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
project:
- _id: c0977eea-5a5b-11eb-8a69-a862db0cf4d1
grant_number: I05060
name: High impedance circuit quantum electrodynamics with hole spins
- _id: 34c0acea-11ca-11ed-8bc3-8775e10fd452
grant_number: '101069515'
name: Integrated Germanium Quantum Technology
publication: Physical Review Applied
publication_identifier:
eissn:
- 2331-7019
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Automated long-range compensation of an rf quantum dot sensor
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 22
year: '2024'
...
---
OA_place: repository
OA_type: green
_id: '18654'
abstract:
- lang: eng
text: "We compute the rotational anisotropy of the free energy of \U0001D6FC−RuCl3
in an external magnetic field. This quantity, known as the magnetotropic susceptibility,
\U0001D458, relates to the second derivative of the free energy with respect to
the angle of rotation. We have used approximation-free, auxiliary-field quantum
Monte Carlo simulations for a realistic model of \U0001D6FC−RuCl3 and optimized
the path integral to alleviate the negative sign problem. This allows us to reach
temperatures down to 30K—an energy scale below the dominant Kitaev coupling. We
demonstrate that the magnetotropic spin susceptibility in this model of \U0001D6FC−RuCl3
displays scaling behavior \U0001D458=\U0001D447\U0001D453(\U0001D435/\U0001D447)
at high temperatures. Once the uniform susceptibility departs from the Curie law
(i.e., at the energy scale of the exchange interactions), it appears to transition
to an emergent scalinglike behavior, characterized by a different function \U0001D453
at lower temperatures, stemming from the locality of torque fluctuations. We observe
a remarkable numerical match between experiment and simulations and we also find
qualitative agreement with the pure Kitaev model. In comparison, for the XXZ Heisenberg
Hamiltonian, the scaling \U0001D458=\U0001D447\U0001D453(\U0001D435/\U0001D447)
breaks down at a temperature scale where the uniform spin susceptibility deviates
from the Curie law and never reemerges at low temperatures."
acknowledgement: We gratefully acknowledge the Gauss Centre for Supercomputing e.V.
for funding this project by providing computing time on the GCS Supercomputer SUPERMUC-NG
at the Leibniz Supercomputing Centre (Project No. pn73xu) as well as the scientific
support and HPC resources provided by the Erlangen National High Performance Computing
Center (NHR@FAU) of the Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU)
under the NHR Project b133ae. NHR funding is provided by federal and Bavarian state
authorities. NHR@FAU hardware is partially funded by the German Research Foundation
(DFG) – 440719683. T.S. thanks funding from the Deutsche Forschungsgemeinschaft
under Grant No. SA 3986/1-1 as well as the Würzburg-Dresden Cluster of Excellence
on Complexity and Topology in Quantum Matter ct.qmat (EXC 2147, Project ID 390858490).
F.F.A. acknowledges financial support from the German Research Foundation (DFG)
under the Grant AS 120/16-1 (Project No. 493886309) that is part of the collaborative
research project SFB Q-M&S funded by the Austrian Science Fund (FWF) F 86. K.A.M.
thanks financial support from the Austrian Science Fund, SFB F 86, Q-M&S.
article_number: L201114
article_processing_charge: No
article_type: letter_note
arxiv: 1
author:
- first_name: Toshihiro
full_name: Sato, Toshihiro
last_name: Sato
- first_name: B. J.
full_name: Ramshaw, B. J.
last_name: Ramshaw
- first_name: Kimberly A
full_name: Modic, Kimberly A
id: 13C26AC0-EB69-11E9-87C6-5F3BE6697425
last_name: Modic
orcid: 0000-0001-9760-3147
- first_name: Fakher F.
full_name: Assaad, Fakher F.
last_name: Assaad
citation:
ama: 'Sato T, Ramshaw BJ, Modic KA, Assaad FF. Scale-invariant magnetic anisotropy
in α-RuCl3: A quantum Monte Carlo study. Physical Review B. 2024;110(20).
doi:10.1103/PhysRevB.110.L201114'
apa: 'Sato, T., Ramshaw, B. J., Modic, K. A., & Assaad, F. F. (2024). Scale-invariant
magnetic anisotropy in α-RuCl3: A quantum Monte Carlo study. Physical Review
B. American Physical Society. https://doi.org/10.1103/PhysRevB.110.L201114'
chicago: 'Sato, Toshihiro, B. J. Ramshaw, Kimberly A Modic, and Fakher F. Assaad.
“Scale-Invariant Magnetic Anisotropy in α-RuCl3: A Quantum Monte Carlo Study.”
Physical Review B. American Physical Society, 2024. https://doi.org/10.1103/PhysRevB.110.L201114.'
ieee: 'T. Sato, B. J. Ramshaw, K. A. Modic, and F. F. Assaad, “Scale-invariant magnetic
anisotropy in α-RuCl3: A quantum Monte Carlo study,” Physical Review B,
vol. 110, no. 20. American Physical Society, 2024.'
ista: 'Sato T, Ramshaw BJ, Modic KA, Assaad FF. 2024. Scale-invariant magnetic anisotropy
in α-RuCl3: A quantum Monte Carlo study. Physical Review B. 110(20), L201114.'
mla: 'Sato, Toshihiro, et al. “Scale-Invariant Magnetic Anisotropy in α-RuCl3: A
Quantum Monte Carlo Study.” Physical Review B, vol. 110, no. 20, L201114,
American Physical Society, 2024, doi:10.1103/PhysRevB.110.L201114.'
short: T. Sato, B.J. Ramshaw, K.A. Modic, F.F. Assaad, Physical Review B 110 (2024).
date_created: 2024-12-15T23:01:50Z
date_published: 2024-11-15T00:00:00Z
date_updated: 2025-09-09T11:48:35Z
day: '15'
department:
- _id: KiMo
doi: 10.1103/PhysRevB.110.L201114
external_id:
arxiv:
- '2312.03080'
isi:
- '001447562900001'
intvolume: ' 110'
isi: 1
issue: '20'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.2312.03080
month: '11'
oa: 1
oa_version: Preprint
project:
- _id: 34ac8b51-11ca-11ed-8bc3-86c15daa9f8f
grant_number: F8607
name: 'Center for Correlated Quantum Materials and Solid State Quantum Systems:
Scale- invariance in entangled quantum spin systems'
publication: Physical Review B
publication_identifier:
eissn:
- 2469-9969
issn:
- 2469-9950
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Scale-invariant magnetic anisotropy in α-RuCl3: A quantum Monte Carlo study'
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 110
year: '2024'
...
---
DOAJ_listed: '1'
OA_place: repository
OA_type: gold
_id: '18655'
abstract:
- lang: eng
text: "Let Qd be the d-dimensional binary hypercube. We say that P={v1,…,vk} is
an increasing path of length k−1 in Qd, if for every i∈[k−1] the edge vivi+1 is
obtained by switching some zero coordinate in vi to a one coordinate in vi+1.\r\nForm
a random subgraph Qdp by retaining each edge in E(Qd) independently with probability
p. We show that there is a phase transition with respect to the length of a longest
increasing path around p=ed. Let α be a constant and let p=αd. When αe, whp there is a path of length d−2 in
Qdp, and in fact, whether it is of length d−2,d−1, or d depends on whether the
all-zero and all-one vertices percolate or not."
acknowledgement: "Research supported by the European Union’s Horizon 2020 research
and innovation programme under the Marie Skłodowska-Curie grant agreement No. 101034413.\r\nThe
authors wish to thank Ross Pinsky for his comments on an earlier version of the
paper, and for bringing reference [12] to our attention. The authors are grateful
to the anonymous referees for their helpful comments and suggestions."
article_number: '70'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Michael
full_name: Anastos, Michael
id: 0b2a4358-bb35-11ec-b7b9-e3279b593dbb
last_name: Anastos
- first_name: Sahar
full_name: Diskin, Sahar
last_name: Diskin
- first_name: Dor
full_name: Elboim, Dor
last_name: Elboim
- first_name: Michael
full_name: Krivelevich, Michael
last_name: Krivelevich
citation:
ama: Anastos M, Diskin S, Elboim D, Krivelevich M. Climbing up a random subgraph
of the hypercube. Electronic Communications in Probability. 2024;29. doi:10.1214/24-ECP639
apa: Anastos, M., Diskin, S., Elboim, D., & Krivelevich, M. (2024). Climbing
up a random subgraph of the hypercube. Electronic Communications in Probability.
Duke University Press. https://doi.org/10.1214/24-ECP639
chicago: Anastos, Michael, Sahar Diskin, Dor Elboim, and Michael Krivelevich. “Climbing
up a Random Subgraph of the Hypercube.” Electronic Communications in Probability.
Duke University Press, 2024. https://doi.org/10.1214/24-ECP639.
ieee: M. Anastos, S. Diskin, D. Elboim, and M. Krivelevich, “Climbing up a random
subgraph of the hypercube,” Electronic Communications in Probability, vol.
29. Duke University Press, 2024.
ista: Anastos M, Diskin S, Elboim D, Krivelevich M. 2024. Climbing up a random subgraph
of the hypercube. Electronic Communications in Probability. 29, 70.
mla: Anastos, Michael, et al. “Climbing up a Random Subgraph of the Hypercube.”
Electronic Communications in Probability, vol. 29, 70, Duke University
Press, 2024, doi:10.1214/24-ECP639.
short: M. Anastos, S. Diskin, D. Elboim, M. Krivelevich, Electronic Communications
in Probability 29 (2024).
corr_author: '1'
date_created: 2024-12-15T23:01:51Z
date_published: 2024-11-24T00:00:00Z
date_updated: 2025-09-09T11:46:53Z
day: '24'
ddc:
- '510'
department:
- _id: MaKw
doi: 10.1214/24-ECP639
ec_funded: 1
external_id:
arxiv:
- '2311.16631'
isi:
- '001356019700001'
file:
- access_level: open_access
checksum: 307a9d049325e6ca9bfe8b4a1f275983
content_type: application/pdf
creator: dernst
date_created: 2024-12-16T07:33:34Z
date_updated: 2024-12-16T07:33:34Z
file_id: '18657'
file_name: 2024_ElectrCommProbability_Anastos.pdf
file_size: 530169
relation: main_file
success: 1
file_date_updated: 2024-12-16T07:33:34Z
has_accepted_license: '1'
intvolume: ' 29'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.2311.16631
month: '11'
oa: 1
oa_version: Published Version
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
call_identifier: H2020
grant_number: '101034413'
name: 'IST-BRIDGE: International postdoctoral program'
publication: Electronic Communications in Probability
publication_identifier:
eissn:
- 1083-589X
publication_status: published
publisher: Duke University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Climbing up a random subgraph of the hypercube
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 29
year: '2024'
...
---
OA_place: repository
OA_type: green
_id: '18656'
abstract:
- lang: eng
text: "We consider the time evolution of the out-of-time-ordered correlator (OTOC)
of two general observables \r\n and \r\n in a mean field chaotic quantum system
described by a random Wigner matrix as its Hamiltonian. We rigorously identify
three time regimes separated by the physically relevant scrambling and relaxation
times. The main feature of our analysis is that we express the error terms in
the optimal Schatten (tracial) norms of the observables, allowing us to track
the exact dependence of the errors on their rank. In particular, for significantly
overlapping observables with low rank the OTOC is shown to exhibit a significant
local maximum at the scrambling time, a feature that may not have been noticed
in the physics literature before. Our main tool is a novel multi-resolvent local
law with Schatten norms that unifies and improves previous local laws involving
either the much cruder operator norm (cf. [10]) or the Hilbert-Schmidt norm (cf.
[11])."
acknowledgement: LE and JH were supported by the ERC Advanced Grant łRMTBeyondž No.
101020331
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Giorgio
full_name: Cipolloni, Giorgio
id: 42198EFA-F248-11E8-B48F-1D18A9856A87
last_name: Cipolloni
orcid: 0000-0002-4901-7992
- first_name: László
full_name: Erdös, László
id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
last_name: Erdös
orcid: 0000-0001-5366-9603
- first_name: Sven Joscha
full_name: Henheik, Sven Joscha
id: 31d731d7-d235-11ea-ad11-b50331c8d7fb
last_name: Henheik
orcid: 0000-0003-1106-327X
citation:
ama: Cipolloni G, Erdös L, Henheik SJ. Out-of-time-ordered correlators for Wigner
matrices. Advances in Theoretical and Mathematical Physics. 2024;28(6):2025-2083.
doi:10.4310/ATMP.241031013250
apa: Cipolloni, G., Erdös, L., & Henheik, S. J. (2024). Out-of-time-ordered
correlators for Wigner matrices. Advances in Theoretical and Mathematical Physics.
International Press. https://doi.org/10.4310/ATMP.241031013250
chicago: Cipolloni, Giorgio, László Erdös, and Sven Joscha Henheik. “Out-of-Time-Ordered
Correlators for Wigner Matrices.” Advances in Theoretical and Mathematical
Physics. International Press, 2024. https://doi.org/10.4310/ATMP.241031013250.
ieee: G. Cipolloni, L. Erdös, and S. J. Henheik, “Out-of-time-ordered correlators
for Wigner matrices,” Advances in Theoretical and Mathematical Physics,
vol. 28, no. 6. International Press, pp. 2025–2083, 2024.
ista: Cipolloni G, Erdös L, Henheik SJ. 2024. Out-of-time-ordered correlators for
Wigner matrices. Advances in Theoretical and Mathematical Physics. 28(6), 2025–2083.
mla: Cipolloni, Giorgio, et al. “Out-of-Time-Ordered Correlators for Wigner Matrices.”
Advances in Theoretical and Mathematical Physics, vol. 28, no. 6, International
Press, 2024, pp. 2025–83, doi:10.4310/ATMP.241031013250.
short: G. Cipolloni, L. Erdös, S.J. Henheik, Advances in Theoretical and Mathematical
Physics 28 (2024) 2025–2083.
corr_author: '1'
date_created: 2024-12-15T23:01:51Z
date_published: 2024-10-30T00:00:00Z
date_updated: 2026-04-07T12:37:10Z
day: '30'
department:
- _id: LaEr
doi: 10.4310/ATMP.241031013250
ec_funded: 1
external_id:
arxiv:
- '2402.17609'
intvolume: ' 28'
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.2402.17609
month: '10'
oa: 1
oa_version: Preprint
page: 2025-2083
project:
- _id: 62796744-2b32-11ec-9570-940b20777f1d
call_identifier: H2020
grant_number: '101020331'
name: Random matrices beyond Wigner-Dyson-Mehta
publication: Advances in Theoretical and Mathematical Physics
publication_identifier:
eissn:
- 1095-0753
issn:
- 1095-0761
publication_status: published
publisher: International Press
quality_controlled: '1'
related_material:
record:
- id: '19540'
relation: dissertation_contains
status: public
scopus_import: '1'
status: public
title: Out-of-time-ordered correlators for Wigner matrices
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 28
year: '2024'
...
---
OA_place: publisher
_id: '18667'
abstract:
- lang: eng
text: "Many chemical and physical properties of materials are determined by the
material’s shape,\r\nfor example the size of its pores and the width of its tunnels.
This makes materials science\r\na prime application area for geometrical and topological
methods. Nevertheless many\r\nmethods in topological data analysis have not been
satisfyingly extended to the needs of\r\nmaterials science. This thesis provides
new methods and new mathematical theorems\r\ntargeted at those specific needs
by answering four different research questions. While the\r\nmotivation for each
of the research questions arises from materials science, the methods\r\nare versatile
and can be applied in different areas as well. \r\n\r\nThe first research question
is concerned with image data, for example a three-dimensional\r\ncomputed tomography
(CT) scan of a material, like sand or stone. There are two commonly\r\nused topologies
for digital images and depending on the application either of them might be\r\nrequired.
However, software for computing the topological data analysis method persistence\r\nhomology,
usually supports only one of the two topologies. We answer the question how to\r\ncompute
persistent homology of an image with respect to one of the two topologies using\r\nsoftware
that is intended for the other topology. \r\n\r\nThe second research question
is concerned with image data as well, and asks how much\r\nof the topological
information of an image is lost when the resolution is coarsened. As\r\ncomputer
tomography scanners are more expensive the higher the resolution, it is an\r\nimportant
question in materials science to know which resolution is enough to get satisfying\r\npersistent
homology. We give theoretical bounds on the information loss based on different\r\ngeometrical
properties of the object to be scanned. In addition, we conduct experiments on\r\nsand
and stone CT image data. \r\n\r\nThe third research question is motivated by comparing
crystalline materials efficiently. As\r\nthe atoms within a crystal repeat periodically,
crystalline materials are either modeled by\r\nunmanageable infinite periodic
point sets, or by one of their fundamental domains, which is\r\nunstable under
perturbation. Therefore a fingerprint of crystalline materials is needed, with\r\nappropriate
properties such that comparing the crystals can be eased by comparing the\r\nfingerprints
instead. We define the density fingerprint and prove the necessary properties.
\r\n\r\nThe fourth research question is motivated by studying the hole-structure
or connectedness,\r\ni.e. persistent homology or merge trees, of crystalline materials.
A common way to deal\r\nwith periodicity is to take a fundamental domain and identify
opposite boundaries to form a\r\ntorus. However, computing persistent homology
or merge trees on that torus loses some\r\nof the information materials scientists
are interested in and is additionally not stable under\r\ncertain noise. We therefore
decorate the merge tree stemming from the torus with additional\r\ninformation
describing the density and growth rate of the periodic copies of a component\r\nwithin
a growing spherical window. We prove all desired properties, like stability and
efficient\r\ncomputability."
acknowledgement: "I was supported by the European Research Council (ERC) Horizon 2020
project\r\n“Alpha Shape Theory Extended” No. 788183 and by the Pöttinger Scholarship.
In addition,\r\nI am very thankful for having been able to attend the second Workshop
for Women in\r\nComputational Topology in July 2019, funded by the Mathematical
Sciences Institute at\r\nANU, the US National Science Foundation through the award
CCF-1841455, the Australian\r\nMathematical Sciences Institute and the Association
for Women in Mathematics. Two of the\r\nprojects presented in this thesis started
there. One of them reached completion thanks to\r\nfunding from the MSRI Summer
Research in Mathematics program awarded to me and my\r\ncollaborators in 2020."
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Teresa
full_name: Heiss, Teresa
id: 4879BB4E-F248-11E8-B48F-1D18A9856A87
last_name: Heiss
orcid: 0000-0002-1780-2689
citation:
ama: Heiss T. New methods for applying topological data analysis to materials science.
2024. doi:10.15479/at:ista:18667
apa: Heiss, T. (2024). New methods for applying topological data analysis to
materials science. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:18667
chicago: Heiss, Teresa. “New Methods for Applying Topological Data Analysis to Materials
Science.” Institute of Science and Technology Austria, 2024. https://doi.org/10.15479/at:ista:18667.
ieee: T. Heiss, “New methods for applying topological data analysis to materials
science,” Institute of Science and Technology Austria, 2024.
ista: Heiss T. 2024. New methods for applying topological data analysis to materials
science. Institute of Science and Technology Austria.
mla: Heiss, Teresa. New Methods for Applying Topological Data Analysis to Materials
Science. Institute of Science and Technology Austria, 2024, doi:10.15479/at:ista:18667.
short: T. Heiss, New Methods for Applying Topological Data Analysis to Materials
Science, Institute of Science and Technology Austria, 2024.
corr_author: '1'
date_created: 2024-12-17T16:17:55Z
date_published: 2024-12-17T00:00:00Z
date_updated: 2026-04-07T12:54:10Z
day: '17'
ddc:
- '514'
- '516'
- '004'
degree_awarded: PhD
department:
- _id: GradSch
- _id: HeEd
doi: 10.15479/at:ista:18667
ec_funded: 1
file:
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creator: theiss
date_created: 2024-12-19T10:24:46Z
date_updated: 2024-12-19T10:24:46Z
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date_created: 2024-12-19T10:24:50Z
date_updated: 2024-12-19T10:24:50Z
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file_name: PhD_Thesis.zip
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relation: source_file
file_date_updated: 2024-12-19T10:24:50Z
has_accepted_license: '1'
keyword:
- persistent homology
- topological data analysis
- periodic
- crystalline materials
- images
- fingerprint
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
page: '111'
project:
- _id: 266A2E9E-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '788183'
name: Alpha Shape Theory Extended
publication_identifier:
isbn:
- 978-3-99078-052-7
issn:
- 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
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- id: '18673'
relation: part_of_dissertation
status: public
- id: '9345'
relation: part_of_dissertation
status: public
status: public
supervisor:
- first_name: Herbert
full_name: Edelsbrunner, Herbert
id: 3FB178DA-F248-11E8-B48F-1D18A9856A87
last_name: Edelsbrunner
orcid: 0000-0002-9823-6833
title: New methods for applying topological data analysis to materials science
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: dissertation
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2024'
...
---
OA_place: repository
_id: '18673'
abstract:
- lang: eng
text: "Motivated by applications to crystalline materials, we generalize the merge
tree and the related barcode of a filtered complex to the periodic setting in
Euclidean space. They are invariant under isometries, changing bases, and indeed
changing lattices. In addition, we prove stability under perturbations and provide
an algorithm that under mild geometric conditions typically satisfied by crystalline
materials takes O((n+m)logn) time, in which n and m are the numbers of vertices
and edges in the quotient complex, respectively.\r\n"
acknowledgement: "Both authors are partially supported by the European Research Council
(ERC) Horizon 2020 project\r\n‘Alpha Shape Theory Extended’, grant no. 788183. The
first author is also partially supported by the DFG\r\nCollaborative Research Center
TRR 109, ‘Discretization in Geometry and Dynamics’, Austrian Science Fund\r\n(FWF),
grant no. I 02979-N35."
article_processing_charge: No
arxiv: 1
author:
- first_name: Herbert
full_name: Edelsbrunner, Herbert
id: 3FB178DA-F248-11E8-B48F-1D18A9856A87
last_name: Edelsbrunner
orcid: 0000-0002-9823-6833
- first_name: Teresa
full_name: Heiss, Teresa
id: 4879BB4E-F248-11E8-B48F-1D18A9856A87
last_name: Heiss
orcid: 0000-0002-1780-2689
citation:
ama: Edelsbrunner H, Heiss T. Merge trees of periodic filtrations. arXiv.
doi:10.48550/arXiv.2408.16575
apa: Edelsbrunner, H., & Heiss, T. (n.d.). Merge trees of periodic filtrations.
arXiv. https://doi.org/10.48550/arXiv.2408.16575
chicago: Edelsbrunner, Herbert, and Teresa Heiss. “Merge Trees of Periodic Filtrations.”
ArXiv, n.d. https://doi.org/10.48550/arXiv.2408.16575.
ieee: H. Edelsbrunner and T. Heiss, “Merge trees of periodic filtrations,” arXiv.
.
ista: Edelsbrunner H, Heiss T. Merge trees of periodic filtrations. arXiv, 10.48550/arXiv.2408.16575.
mla: Edelsbrunner, Herbert, and Teresa Heiss. “Merge Trees of Periodic Filtrations.”
ArXiv, doi:10.48550/arXiv.2408.16575.
short: H. Edelsbrunner, T. Heiss, ArXiv (n.d.).
corr_author: '1'
date_created: 2024-12-18T14:06:57Z
date_published: 2024-08-29T00:00:00Z
date_updated: 2026-04-07T12:54:09Z
day: '29'
department:
- _id: HeEd
doi: 10.48550/arXiv.2408.16575
ec_funded: 1
external_id:
arxiv:
- '2408.16575'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.48550/arXiv.2408.16575
month: '08'
oa: 1
oa_version: Preprint
project:
- _id: 266A2E9E-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '788183'
name: Alpha Shape Theory Extended
- _id: 2561EBF4-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: I02979-N35
name: Persistence and stability of geometric complexes
publication: arXiv
publication_status: draft
related_material:
record:
- id: '18667'
relation: dissertation_contains
status: public
status: public
title: Merge trees of periodic filtrations
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2024'
...