--- _id: '17423' abstract: - lang: eng text: We introduce an algorithm to reconstruct a mesh from discrete samples of a shape’s Signed Distance Function (SDF). A simple geometric reinterpretation of the SDF lets us formulate the problem through a point cloud, from which a surface can be extracted with existing techniques. We extract all possible information from the SDF data, outperforming commonly used algorithms and imposing no topological or geometric restrictions. article_number: '23' article_processing_charge: No author: - first_name: Silvia full_name: Sellán, Silvia last_name: Sellán - first_name: Yingying full_name: Ren, Yingying id: 93d68d10-3540-11ef-a265-f748a50dba3d last_name: Ren - first_name: Christopher full_name: Batty, Christopher last_name: Batty - first_name: Oded full_name: Stein, Oded last_name: Stein citation: ama: 'Sellán S, Ren Y, Batty C, Stein O. Reach for the arcs: Reconstructing surfaces from SDFs via tangent points. In: SIGGRAPH ’24: Special Interest Group on Computer Graphics and Interactive Techniques Conference. Association for Computing Machinery; 2024. doi:10.1145/3641519.3657419' apa: 'Sellán, S., Ren, Y., Batty, C., & Stein, O. (2024). Reach for the arcs: Reconstructing surfaces from SDFs via tangent points. In SIGGRAPH ’24: Special Interest Group on Computer Graphics and Interactive Techniques Conference. Denver, CO, United States: Association for Computing Machinery. https://doi.org/10.1145/3641519.3657419' chicago: 'Sellán, Silvia, Yingying Ren, Christopher Batty, and Oded Stein. “Reach for the Arcs: Reconstructing Surfaces from SDFs via Tangent Points.” In SIGGRAPH ’24: Special Interest Group on Computer Graphics and Interactive Techniques Conference. Association for Computing Machinery, 2024. https://doi.org/10.1145/3641519.3657419.' ieee: 'S. Sellán, Y. Ren, C. Batty, and O. Stein, “Reach for the arcs: Reconstructing surfaces from SDFs via tangent points,” in SIGGRAPH ’24: Special Interest Group on Computer Graphics and Interactive Techniques Conference, Denver, CO, United States, 2024.' ista: 'Sellán S, Ren Y, Batty C, Stein O. 2024. Reach for the arcs: Reconstructing surfaces from SDFs via tangent points. SIGGRAPH ’24: Special Interest Group on Computer Graphics and Interactive Techniques Conference. SIGGRAPH: Computer Graphics and Interactive Techniques Conference, 23.' mla: 'Sellán, Silvia, et al. “Reach for the Arcs: Reconstructing Surfaces from SDFs via Tangent Points.” SIGGRAPH ’24: Special Interest Group on Computer Graphics and Interactive Techniques Conference, 23, Association for Computing Machinery, 2024, doi:10.1145/3641519.3657419.' short: 'S. Sellán, Y. Ren, C. Batty, O. Stein, in:, SIGGRAPH ’24: Special Interest Group on Computer Graphics and Interactive Techniques Conference, Association for Computing Machinery, 2024.' conference: end_date: 2024-08-01 location: Denver, CO, United States name: 'SIGGRAPH: Computer Graphics and Interactive Techniques Conference' start_date: 2024-07-27 date_created: 2024-08-12T10:02:58Z date_published: 2024-07-13T00:00:00Z date_updated: 2024-08-12T10:11:19Z day: '13' doi: 10.1145/3641519.3657419 extern: '1' language: - iso: eng month: '07' oa_version: None publication: 'SIGGRAPH ''24: Special Interest Group on Computer Graphics and Interactive Techniques Conference' publication_identifier: isbn: - '9798400705250' publication_status: published publisher: Association for Computing Machinery quality_controlled: '1' scopus_import: '1' status: public title: 'Reach for the arcs: Reconstructing surfaces from SDFs via tangent points' type: conference user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 year: '2024' ... --- _id: '17424' abstract: - lang: eng text: "Surface-based inflatables are composed of two thin layers of nearly inextensible sheet material joined together along carefully selected fusing curves. During inflation, pressure forces separate the two sheets to maximize the enclosed volume. The fusing curves restrict this expansion, leading to a spatially varying in-plane contraction and hence metric frustration. The inflated structure settles into a 3D equilibrium that balances pressure forces with the internal elastic forces of the sheets.\r\nWe present a computational framework for analyzing and designing surface-based inflatable structures with arbitrary fusing patterns. Our approach employs numerical homogenization to characterize the behavior of parametric families of periodic inflatable patch geometries, which can then be combined to tessellate the sheet with smoothly varying patterns. We propose a novel parametrization of the underlying deformation space that allows accurate, efficient, and systematical analysis of the stretching and bending behavior of inflated patches with potentially open boundaries.\r\nWe apply our homogenization algorithm to create a database of geometrically diverse fusing patterns spanning a wide range of material properties and deformation characteristics. This database is employed in an inverse design algorithm that solves for fusing curves to best approximate a given input target surface. Local patches are selected and blended to form a global network of curves based on a geometric flattening algorithm. These fusing curves are then further optimized to minimize the distance of the deployed structure to target surface. We show that this approach offers greater flexibility to approximate given target geometries compared to previous work while significantly improving structural performance." article_number: '87' article_processing_charge: No article_type: original author: - first_name: Yingying full_name: Ren, Yingying id: 93d68d10-3540-11ef-a265-f748a50dba3d last_name: Ren - first_name: Julian full_name: Panetta, Julian last_name: Panetta - first_name: Seiichi full_name: Suzuki, Seiichi last_name: Suzuki - first_name: Uday full_name: Kusupati, Uday last_name: Kusupati - first_name: Florin full_name: Isvoranu, Florin last_name: Isvoranu - first_name: Mark full_name: Pauly, Mark last_name: Pauly citation: ama: Ren Y, Panetta J, Suzuki S, Kusupati U, Isvoranu F, Pauly M. Computational homogenization for inverse design of surface-based inflatables. ACM Transactions on Graphics. 2024;43(4). doi:10.1145/3658125 apa: Ren, Y., Panetta, J., Suzuki, S., Kusupati, U., Isvoranu, F., & Pauly, M. (2024). Computational homogenization for inverse design of surface-based inflatables. ACM Transactions on Graphics. Association for Computing Machinery. https://doi.org/10.1145/3658125 chicago: Ren, Yingying, Julian Panetta, Seiichi Suzuki, Uday Kusupati, Florin Isvoranu, and Mark Pauly. “Computational Homogenization for Inverse Design of Surface-Based Inflatables.” ACM Transactions on Graphics. Association for Computing Machinery, 2024. https://doi.org/10.1145/3658125. ieee: Y. Ren, J. Panetta, S. Suzuki, U. Kusupati, F. Isvoranu, and M. Pauly, “Computational homogenization for inverse design of surface-based inflatables,” ACM Transactions on Graphics, vol. 43, no. 4. Association for Computing Machinery, 2024. ista: Ren Y, Panetta J, Suzuki S, Kusupati U, Isvoranu F, Pauly M. 2024. Computational homogenization for inverse design of surface-based inflatables. ACM Transactions on Graphics. 43(4), 87. mla: Ren, Yingying, et al. “Computational Homogenization for Inverse Design of Surface-Based Inflatables.” ACM Transactions on Graphics, vol. 43, no. 4, 87, Association for Computing Machinery, 2024, doi:10.1145/3658125. short: Y. Ren, J. Panetta, S. Suzuki, U. Kusupati, F. Isvoranu, M. Pauly, ACM Transactions on Graphics 43 (2024). date_created: 2024-08-12T10:03:38Z date_published: 2024-07-19T00:00:00Z date_updated: 2024-08-12T10:08:13Z day: '19' doi: 10.1145/3658125 extern: '1' intvolume: ' 43' issue: '4' language: - iso: eng month: '07' oa_version: None publication: ACM Transactions on Graphics publication_identifier: eissn: - 1557-7368 issn: - 0730-0301 publication_status: published publisher: Association for Computing Machinery quality_controlled: '1' scopus_import: '1' status: public title: Computational homogenization for inverse design of surface-based inflatables type: journal_article user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 43 year: '2024' ... --- _id: '17435' abstract: - lang: eng text: 'The Mediterranean region is experiencing pronounced aridification and in certain areas higher occurrence of intense precipitation. In this work, we analyze the evolution of the precipitation probability distribution in terms of precipitating days (or “wet-days”) and all-days quantile trends, in Europe and the Mediterranean, using the ERA5 reanalysis. Looking at the form of wet-days quantile trends curves, we identify four regimes. Two are predominant: in most of northern Europe the precipitation quantiles all intensify, while in the Mediterranean the low-medium quantiles are mostly decreasing as extremes intensify or decrease. The wet-days distribution is then modeled by a Weibull law with two parameters, whose changes capture the four regimes. Assessing the significance of the parameters'' changes over 1950–2020 shows that a signal on wet-days distribution has already emerged in northern Europe (where the distribution shifts to more intense precipitation), but not yet in the Mediterranean, where the natural variability is stronger. We extend the results by describing the all-days distribution change as the wet-days’ change plus a contribution from the dry-days frequency change, and study their relative contribution. In northern Europe, the wet-days distribution change is the dominant driver, and the contribution of dry-days frequency change can be neglected for wet-days percentiles above about 50%. In the Mediterranean, however, the change of precipitation distribution comes from the significant increase of dry-days frequency instead of an intensity change during wet-days. Therefore, in the Mediterranean the increase of dry-days frequency is crucial for all-days trends, even for heavy precipitation.' acknowledgement: CJM gratefully acknowledge funding from the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation program (Project CLUSTER, Grant Agreement No 805041). The authors also thank Samuel Somot (Centre National de Recherches Météorologiques, Toulouse) and Juliette Blanchet (Institut des Géosciences de l’Environnement, Grenoble) for their fruitful discussions on the project. article_number: e2023JD040413 article_processing_charge: Yes (in subscription journal) article_type: original author: - first_name: Julie full_name: André, Julie last_name: André - first_name: Fabio full_name: D'Andrea, Fabio last_name: D'Andrea - first_name: Philippe full_name: Drobinski, Philippe last_name: Drobinski - first_name: Caroline J full_name: Muller, Caroline J id: f978ccb0-3f7f-11eb-b193-b0e2bd13182b last_name: Muller orcid: 0000-0001-5836-5350 citation: ama: 'André J, D’Andrea F, Drobinski P, Muller CJ. Regimes of precipitation change over Europe and the Mediterranean. Journal of Geophysical Research: Atmospheres. 2024;129(15). doi:10.1029/2023JD040413' apa: 'André, J., D’Andrea, F., Drobinski, P., & Muller, C. J. (2024). Regimes of precipitation change over Europe and the Mediterranean. Journal of Geophysical Research: Atmospheres. Wiley. https://doi.org/10.1029/2023JD040413' chicago: 'André, Julie, Fabio D’Andrea, Philippe Drobinski, and Caroline J Muller. “Regimes of Precipitation Change over Europe and the Mediterranean.” Journal of Geophysical Research: Atmospheres. Wiley, 2024. https://doi.org/10.1029/2023JD040413.' ieee: 'J. André, F. D’Andrea, P. Drobinski, and C. J. Muller, “Regimes of precipitation change over Europe and the Mediterranean,” Journal of Geophysical Research: Atmospheres, vol. 129, no. 15. Wiley, 2024.' ista: 'André J, D’Andrea F, Drobinski P, Muller CJ. 2024. Regimes of precipitation change over Europe and the Mediterranean. Journal of Geophysical Research: Atmospheres. 129(15), e2023JD040413.' mla: 'André, Julie, et al. “Regimes of Precipitation Change over Europe and the Mediterranean.” Journal of Geophysical Research: Atmospheres, vol. 129, no. 15, e2023JD040413, Wiley, 2024, doi:10.1029/2023JD040413.' short: 'J. André, F. D’Andrea, P. Drobinski, C.J. Muller, Journal of Geophysical Research: Atmospheres 129 (2024).' date_created: 2024-08-18T22:01:04Z date_published: 2024-08-16T00:00:00Z date_updated: 2025-09-08T08:56:53Z day: '16' ddc: - '550' department: - _id: CaMu doi: 10.1029/2023JD040413 ec_funded: 1 external_id: isi: - '001285897600001' file: - access_level: open_access checksum: 71d7f966318e11ce474737f4e37405ef content_type: application/pdf creator: dernst date_created: 2024-08-19T06:32:21Z date_updated: 2024-08-19T06:32:21Z file_id: '17438' file_name: 2024_JGRAtmospheres_Andre.pdf file_size: 8126046 relation: main_file success: 1 file_date_updated: 2024-08-19T06:32:21Z has_accepted_license: '1' intvolume: ' 129' isi: 1 issue: '15' language: - iso: eng license: https://creativecommons.org/licenses/by-nc/4.0/ month: '08' oa: 1 oa_version: Published Version project: - _id: 629205d8-2b32-11ec-9570-e1356ff73576 call_identifier: H2020 grant_number: '805041' name: Organization of CLoUdS, and implications of Tropical cyclones and for the Energetics of the tropics, in current and waRming climate publication: 'Journal of Geophysical Research: Atmospheres' publication_identifier: eissn: - 2169-8996 issn: - 2169-897X publication_status: published publisher: Wiley quality_controlled: '1' scopus_import: '1' status: public title: Regimes of precipitation change over Europe and the Mediterranean tmp: image: /images/cc_by_nc.png legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0) short: CC BY-NC (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 129 year: '2024' ... --- DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '17436' abstract: - lang: eng text: The auxin signaling molecule controls a variety of growth and developmental processes in land plants. Auxin regulates gene expression through a nuclear auxin signaling pathway (NAP) consisting of the ubiquitin ligase auxin receptor TIR1/AFB, its Aux/IAA degradation substrate, and DNA-binding ARF transcription factors. Although extensive qualitative understanding of the pathway and its interactions has been obtained, mostly by studying the flowering plant Arabidopsis thaliana, it remains unknown how these translate to quantitative system behavior in vivo, a problem that is confounded by the large NAP gene families in most species. Here, we used the minimal NAP of the liverwort Marchantia polymorpha to quantitatively map NAP protein accumulation and dynamics in vivo through the use of knockin fluorescent fusion proteins. Beyond revealing the dynamic native accumulation profile of the entire NAP protein network, we discovered that the two central ARFs, MpARF1 and MpARF2, are proteasomally degraded. This auxin-independent degradation tunes ARF protein stoichiometry to favor gene activation, thereby reprogramming auxin response during the developmental progression. Thus, quantitative analysis of the entire NAP has enabled us to identify ARF degradation and the stoichiometries of activator and repressor ARFs as a potential mechanism for controlling gemma germination. acknowledgement: "We are grateful to Iris Nieuwland and Neri van Laar for experimental support. No conflict of interest declared.\r\nThis work was supported by the Netherlands Organisation for Scientific Research, the Netherlands (grants ALWOP.402 and OCENW.M20.031 to J.W.B.) and the Human Frontiers Research Program (grant RGP0015/2022 to D.W.)." article_number: '101039' article_processing_charge: Yes article_type: original author: - first_name: Shubhajit full_name: Das, Shubhajit id: b08969a4-f2a5-11ed-b6c4-ff0f10b7d0be last_name: Das - first_name: Martijn full_name: De Roij, Martijn last_name: De Roij - first_name: Simon full_name: Bellows, Simon last_name: Bellows - first_name: Melissa Dipp full_name: Alvarez, Melissa Dipp last_name: Alvarez - first_name: Sumanth full_name: Mutte, Sumanth last_name: Mutte - first_name: Wouter full_name: Kohlen, Wouter last_name: Kohlen - first_name: Etienne full_name: Farcot, Etienne last_name: Farcot - first_name: Dolf full_name: Weijers, Dolf last_name: Weijers - first_name: Jan Willem full_name: Borst, Jan Willem last_name: Borst citation: ama: Das S, De Roij M, Bellows S, et al. Quantitative imaging reveals the role of MpARF proteasomal degradation during gemma germination. Plant Communications. 2024;5(11). doi:10.1016/j.xplc.2024.101039 apa: Das, S., De Roij, M., Bellows, S., Alvarez, M. D., Mutte, S., Kohlen, W., … Borst, J. W. (2024). Quantitative imaging reveals the role of MpARF proteasomal degradation during gemma germination. Plant Communications. Elsevier. https://doi.org/10.1016/j.xplc.2024.101039 chicago: Das, Shubhajit, Martijn De Roij, Simon Bellows, Melissa Dipp Alvarez, Sumanth Mutte, Wouter Kohlen, Etienne Farcot, Dolf Weijers, and Jan Willem Borst. “Quantitative Imaging Reveals the Role of MpARF Proteasomal Degradation during Gemma Germination.” Plant Communications. Elsevier, 2024. https://doi.org/10.1016/j.xplc.2024.101039. ieee: S. Das et al., “Quantitative imaging reveals the role of MpARF proteasomal degradation during gemma germination,” Plant Communications, vol. 5, no. 11. Elsevier, 2024. ista: Das S, De Roij M, Bellows S, Alvarez MD, Mutte S, Kohlen W, Farcot E, Weijers D, Borst JW. 2024. Quantitative imaging reveals the role of MpARF proteasomal degradation during gemma germination. Plant Communications. 5(11), 101039. mla: Das, Shubhajit, et al. “Quantitative Imaging Reveals the Role of MpARF Proteasomal Degradation during Gemma Germination.” Plant Communications, vol. 5, no. 11, 101039, Elsevier, 2024, doi:10.1016/j.xplc.2024.101039. short: S. Das, M. De Roij, S. Bellows, M.D. Alvarez, S. Mutte, W. Kohlen, E. Farcot, D. Weijers, J.W. Borst, Plant Communications 5 (2024). date_created: 2024-08-18T22:01:04Z date_published: 2024-11-11T00:00:00Z date_updated: 2025-01-09T12:26:55Z day: '11' ddc: - '580' department: - _id: JiFr doi: 10.1016/j.xplc.2024.101039 external_id: pmid: - '38988072' file: - access_level: open_access checksum: 38cabc1042ac7fb70e6c4c510eba88fc content_type: application/pdf creator: dernst date_created: 2025-01-09T12:25:32Z date_updated: 2025-01-09T12:25:32Z file_id: '18811' file_name: 2024_PlantCommunications_Das.pdf file_size: 4970540 relation: main_file success: 1 file_date_updated: 2025-01-09T12:25:32Z has_accepted_license: '1' intvolume: ' 5' issue: '11' language: - iso: eng month: '11' oa: 1 oa_version: Published Version pmid: 1 publication: Plant Communications publication_identifier: eissn: - 2590-3462 publication_status: published publisher: Elsevier quality_controlled: '1' scopus_import: '1' status: public title: Quantitative imaging reveals the role of MpARF proteasomal degradation during gemma germination tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 5 year: '2024' ... --- _id: '17437' abstract: - lang: eng text: We prove that the zero-fiber of the moment map of a totally negative quiver has rational singularities. Our proof consists in generalizing dimension bounds on jet spaces of this fiber, which were introduced by Budur. We also transfer the rational singularities property to other moduli spaces of objects in 2-Calabi-Yau categories, based on recent work of Davison. This has interesting arithmetic applications on quiver moment maps and moduli spaces of objects in 2-Calabi-Yau categories. First, we generalize results of Wyss on the asymptotic behaviour of counts of jets of quiver moment maps over finite fields. Moreover, we interpret the limit of counts of jets on a given moduli space as its p-adic volume under a canonical measure analogous to the measure built by Carocci, Orecchia and Wyss on certain moduli spaces of coherent sheaves. acknowledgement: "I would like to warmly thank Dimitri Wyss for his guidance and supervision and Nero Budur for helpful discussions and answering all my questions on his previous works. I would also like to thank Francesca Carocci, Ben Davison, Lucien Hennecart and Olivier Schiffmann for helpful remarks and discussions during the writing of this paper. Finally, I would like to thank the anonymous referees for their careful reading and suggesting improvements in the exposition.\r\nOpen access funding provided by Institute of Science and Technology (IST Austria). This work was supported by the Swiss National Science Foundation [No. 196960]. This project has also received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 101034413." article_processing_charge: Yes (via OA deal) article_type: original author: - first_name: Tanguy full_name: Vernet, Tanguy id: 19f1e3bf-c59a-11ee-a1af-ed269948817b last_name: Vernet citation: ama: Vernet T. Rational singularities for moment maps of totally negative quivers. Transformation Groups. 2024. doi:10.1007/s00031-024-09873-0 apa: Vernet, T. (2024). Rational singularities for moment maps of totally negative quivers. Transformation Groups. Springer Nature. https://doi.org/10.1007/s00031-024-09873-0 chicago: Vernet, Tanguy. “Rational Singularities for Moment Maps of Totally Negative Quivers.” Transformation Groups. Springer Nature, 2024. https://doi.org/10.1007/s00031-024-09873-0. ieee: T. Vernet, “Rational singularities for moment maps of totally negative quivers,” Transformation Groups. Springer Nature, 2024. ista: Vernet T. 2024. Rational singularities for moment maps of totally negative quivers. Transformation Groups. mla: Vernet, Tanguy. “Rational Singularities for Moment Maps of Totally Negative Quivers.” Transformation Groups, Springer Nature, 2024, doi:10.1007/s00031-024-09873-0. short: T. Vernet, Transformation Groups (2024). corr_author: '1' date_created: 2024-08-18T22:01:04Z date_published: 2024-09-09T00:00:00Z date_updated: 2025-09-08T08:56:08Z day: '09' ddc: - '510' department: - _id: TaHa doi: 10.1007/s00031-024-09873-0 ec_funded: 1 external_id: isi: - '001287455300001' has_accepted_license: '1' isi: 1 language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.1007/s00031-024-09873-0 month: '09' oa: 1 oa_version: Published Version project: - _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c call_identifier: H2020 grant_number: '101034413' name: 'IST-BRIDGE: International postdoctoral program' publication: Transformation Groups publication_identifier: eissn: - 1531-586X issn: - 1083-4362 publication_status: epub_ahead publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: Rational singularities for moment maps of totally negative quivers tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 year: '2024' ... --- OA_place: repository OA_type: green _id: '17442' abstract: - lang: eng text: "Although eukaryotic Argonautes have a pivotal role in post-transcriptional gene regulation through nucleic acid cleavage, some short prokaryotic Argonaute variants (pAgos) rely on auxiliary nuclease factors for efficient foreign DNA degradation1. Here we reveal the activation pathway of the DNA defence module DdmDE system, which rapidly eliminates small, multicopy plasmids from the Vibrio cholerae seventh pandemic strain (7PET)2. Through a combination of cryo-electron microscopy, biochemistry and in vivo plasmid clearance assays, we demonstrate that DdmE is a catalytically inactive, DNA-guided, DNA-targeting pAgo with a distinctive insertion domain. We observe that the helicase-nuclease DdmD transitions from an autoinhibited, dimeric complex to a monomeric state upon loading of single-stranded DNA targets. Furthermore, the complete structure of the DdmDE–guide–target handover complex provides a comprehensive view into how DNA recognition triggers processive plasmid destruction. Our work establishes a mechanistic foundation for how pAgos utilize ancillary factors to achieve plasmid clearance, and provides insights into anti-plasmid immunity in bacteria.\r\n\r\n" acknowledgement: We thank K. Kiernan, G. Hibshman and I. Strohkendl for insightful discussions and comments on the manuscript, and R. Lin for assistance with the ATPase assay. Data were collected at the Sauer Structural Biology Laboratory at the University of Texas at Austin. This work was supported in part by the National Institute of General Medical Sciences (NIGMS) of the National Institutes of Health (NIH) R35GM138348 (to D.W.T.) and Welch Foundation research grant F-1938 (to D.W.T.). article_processing_charge: No article_type: original author: - first_name: Jack Peter Kelly full_name: Bravo, Jack Peter Kelly id: 96aecfa5-8931-11ee-af30-aa6a5d6eee0e last_name: Bravo orcid: 0000-0003-0456-0753 - first_name: Delisa A. full_name: Ramos, Delisa A. last_name: Ramos - first_name: Rodrigo full_name: Fregoso Ocampo, Rodrigo last_name: Fregoso Ocampo - first_name: Caiden full_name: Ingram, Caiden last_name: Ingram - first_name: David W. full_name: Taylor, David W. last_name: Taylor citation: ama: Bravo JPK, Ramos DA, Fregoso Ocampo R, Ingram C, Taylor DW. Plasmid targeting and destruction by the DdmDE bacterial defence system. Nature. 2024;630(8018):961-967. doi:10.1038/s41586-024-07515-9 apa: Bravo, J. P. K., Ramos, D. A., Fregoso Ocampo, R., Ingram, C., & Taylor, D. W. (2024). Plasmid targeting and destruction by the DdmDE bacterial defence system. Nature. Springer Nature. https://doi.org/10.1038/s41586-024-07515-9 chicago: Bravo, Jack Peter Kelly, Delisa A. Ramos, Rodrigo Fregoso Ocampo, Caiden Ingram, and David W. Taylor. “Plasmid Targeting and Destruction by the DdmDE Bacterial Defence System.” Nature. Springer Nature, 2024. https://doi.org/10.1038/s41586-024-07515-9. ieee: J. P. K. Bravo, D. A. Ramos, R. Fregoso Ocampo, C. Ingram, and D. W. Taylor, “Plasmid targeting and destruction by the DdmDE bacterial defence system,” Nature, vol. 630, no. 8018. Springer Nature, pp. 961–967, 2024. ista: Bravo JPK, Ramos DA, Fregoso Ocampo R, Ingram C, Taylor DW. 2024. Plasmid targeting and destruction by the DdmDE bacterial defence system. Nature. 630(8018), 961–967. mla: Bravo, Jack Peter Kelly, et al. “Plasmid Targeting and Destruction by the DdmDE Bacterial Defence System.” Nature, vol. 630, no. 8018, Springer Nature, 2024, pp. 961–67, doi:10.1038/s41586-024-07515-9. short: J.P.K. Bravo, D.A. Ramos, R. Fregoso Ocampo, C. Ingram, D.W. Taylor, Nature 630 (2024) 961–967. corr_author: '1' date_created: 2024-08-19T09:41:18Z date_published: 2024-06-27T00:00:00Z date_updated: 2025-06-24T12:47:21Z day: '27' department: - _id: JaBr doi: 10.1038/s41586-024-07515-9 external_id: pmid: - '38740055' intvolume: ' 630' issue: '8018' language: - iso: eng main_file_link: - open_access: '1' url: https://pmc.ncbi.nlm.nih.gov/articles/PMC11649018/ month: '06' oa: 1 oa_version: Submitted Version page: 961-967 pmid: 1 publication: Nature publication_identifier: eissn: - 1476-4687 issn: - 0028-0836 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: Plasmid targeting and destruction by the DdmDE bacterial defence system type: journal_article user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 630 year: '2024' ... --- _id: '17447' abstract: - lang: eng text: Let F be a diagonal cubic form over Z in six variables. From the dual variety in the delta method of Duke–Friedlander–Iwaniec and Heath‐Brown, we unconditionally extract a weighted count of certain special integral zeros of F in regions of diameter X - 8 . Heath‐Brown did the same in four variables, but our analysis differs and captures some novel features. We also put forth an axiomatic framework for more general F. acknowledgement: This paper is an important component of the thesis work described in [25]; many of my acknowledgements there apply here as well. I also thank my advisor, Peter Sarnak, for many helpful suggestions and questions on the exposition, references, assumptions, and scope of (various drafts of) the present work. I am also grateful to Trevor Wooley for providing some helpful general comments on special subvarieties and the reference [24]. I thank Tim Browning for inspiring part of the current title of the paper. Finally, thanks are due to the referee for providing many helpful suggestions. This work was partially supported by NSF grant DMS-1802211, and the European Union’s Horizon 2020 research and innovation program under the Marie Skłodowska-Curie Grant AgreementNo. 101034413. article_number: e12975 article_processing_charge: Yes (via OA deal) article_type: original arxiv: 1 author: - first_name: Victor full_name: Wang, Victor id: 76096395-aea4-11ed-a680-ab8ebbd3f1b9 last_name: Wang orcid: 0000-0002-0704-7026 citation: ama: Wang V. Special cubic zeros and the dual variety. Journal of the London Mathematical Society. 2024;110(3). doi:10.1112/jlms.12975 apa: Wang, V. (2024). Special cubic zeros and the dual variety. Journal of the London Mathematical Society. Wiley. https://doi.org/10.1112/jlms.12975 chicago: Wang, Victor. “Special Cubic Zeros and the Dual Variety.” Journal of the London Mathematical Society. Wiley, 2024. https://doi.org/10.1112/jlms.12975. ieee: V. Wang, “Special cubic zeros and the dual variety,” Journal of the London Mathematical Society, vol. 110, no. 3. Wiley, 2024. ista: Wang V. 2024. Special cubic zeros and the dual variety. Journal of the London Mathematical Society. 110(3), e12975. mla: Wang, Victor. “Special Cubic Zeros and the Dual Variety.” Journal of the London Mathematical Society, vol. 110, no. 3, e12975, Wiley, 2024, doi:10.1112/jlms.12975. short: V. Wang, Journal of the London Mathematical Society 110 (2024). corr_author: '1' date_created: 2024-08-20T08:41:40Z date_published: 2024-08-14T00:00:00Z date_updated: 2025-09-08T08:58:20Z day: '14' ddc: - '512' department: - _id: TiBr doi: 10.1112/jlms.12975 ec_funded: 1 external_id: arxiv: - '2108.03396' isi: - '001310529600001' file: - access_level: open_access checksum: 90437e19f57520b4d66ca62408f6c81e content_type: application/pdf creator: dernst date_created: 2024-08-21T06:36:40Z date_updated: 2024-08-21T06:36:40Z file_id: '17454' file_name: 2024_JourLondonMathSoc_Wang.pdf file_size: 438751 relation: main_file success: 1 file_date_updated: 2024-08-21T06:36:40Z has_accepted_license: '1' intvolume: ' 110' isi: 1 issue: '3' language: - iso: eng month: '08' oa: 1 oa_version: Published Version project: - _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c call_identifier: H2020 grant_number: '101034413' name: 'IST-BRIDGE: International postdoctoral program' publication: Journal of the London Mathematical Society publication_identifier: eissn: - 1469-7750 issn: - 0024-6107 publication_status: published publisher: Wiley quality_controlled: '1' scopus_import: '1' status: public title: Special cubic zeros and the dual variety tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 110 year: '2024' ... --- _id: '17449' abstract: - lang: eng text: We prove that the $k$-th positive integer moment of partial sums of Steinhaus random multiplicative functions over the interval $(x, x+H]$ matches the corresponding Gaussian moment, as long as $H\ll x/(\log x)^{2k^2+2+o(1)}$ and $H$ tends to infinity with $x$. We show that properly normalized partial sums of typical multiplicative functions arising from realizations of random multiplicative functions have Gaussian limiting distribution in short moving intervals $(x, x+H]$ with $H\ll X/(\log X)^{W(X)}$ tending to infinity with $X$, where $x$ is uniformly chosen from $\{1,2,\dots, X\}$, and $W(X)$ tends to infinity with $X$ arbitrarily slowly. This makes some initial progress on a recent question of Harper. acknowledgement: "We thank Andrew Granville and the anonymous referee for many detailed comments that led us to significantly improve the results and presentation of our work. We thank and Adam Harper for helpful discussions and useful comments and corrections on earlier versions. We also thank Yuqiu Fu, Larry Guth, Kannan Soundararajan, Katharine Woo, and Liyang Yang for helpful discussions. Finally, we thank Peter Sarnak for introducing us (the authors) to each other during the “50 Years of Number Theory and Random Matrix Theory” Conference at IAS and making the collaboration possible. \r\nOpen Access made possible by participating institutions via Subscribe to Open." article_processing_charge: Yes (via OA deal) article_type: original arxiv: 1 author: - first_name: Mayank full_name: Pandey, Mayank last_name: Pandey - first_name: Victor full_name: Wang, Victor id: 76096395-aea4-11ed-a680-ab8ebbd3f1b9 last_name: Wang orcid: 0000-0002-0704-7026 - first_name: Max Wenqiang full_name: Xu, Max Wenqiang last_name: Xu citation: ama: Pandey M, Wang V, Xu MW. Partial sums of typical multiplicative functions over short moving intervals. Algebra & Number Theory. 2024;18(2):389-408. doi:10.2140/ant.2024.18.389 apa: Pandey, M., Wang, V., & Xu, M. W. (2024). Partial sums of typical multiplicative functions over short moving intervals. Algebra & Number Theory. Mathematical Sciences Publishers. https://doi.org/10.2140/ant.2024.18.389 chicago: Pandey, Mayank, Victor Wang, and Max Wenqiang Xu. “Partial Sums of Typical Multiplicative Functions over Short Moving Intervals.” Algebra & Number Theory. Mathematical Sciences Publishers, 2024. https://doi.org/10.2140/ant.2024.18.389. ieee: M. Pandey, V. Wang, and M. W. Xu, “Partial sums of typical multiplicative functions over short moving intervals,” Algebra & Number Theory, vol. 18, no. 2. Mathematical Sciences Publishers, pp. 389–408, 2024. ista: Pandey M, Wang V, Xu MW. 2024. Partial sums of typical multiplicative functions over short moving intervals. Algebra & Number Theory. 18(2), 389–408. mla: Pandey, Mayank, et al. “Partial Sums of Typical Multiplicative Functions over Short Moving Intervals.” Algebra & Number Theory, vol. 18, no. 2, Mathematical Sciences Publishers, 2024, pp. 389–408, doi:10.2140/ant.2024.18.389. short: M. Pandey, V. Wang, M.W. Xu, Algebra & Number Theory 18 (2024) 389–408. date_created: 2024-08-20T08:48:26Z date_published: 2024-02-06T00:00:00Z date_updated: 2024-08-21T06:58:43Z day: '06' ddc: - '510' doi: 10.2140/ant.2024.18.389 extern: '1' external_id: arxiv: - '2207.11758' file: - access_level: open_access checksum: 1e3467a14de754bf8d3bff03a015e1ce content_type: application/pdf creator: dernst date_created: 2024-08-21T06:46:56Z date_updated: 2024-08-21T06:46:56Z file_id: '17455' file_name: 2024_AlgebraNumberTheory_Pandey.pdf file_size: 1401725 relation: main_file success: 1 file_date_updated: 2024-08-21T06:46:56Z has_accepted_license: '1' intvolume: ' 18' issue: '2' language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.48550/arXiv.2207.11758 month: '02' oa: 1 oa_version: Published Version page: 389-408 publication: Algebra & Number Theory publication_identifier: eissn: - 1944-7833 issn: - 1937-0652 publication_status: published publisher: Mathematical Sciences Publishers quality_controlled: '1' scopus_import: '1' status: public title: Partial sums of typical multiplicative functions over short moving intervals tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 18 year: '2024' ... --- DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '17457' abstract: - lang: eng text: "Autoantibodies against the protein leucine-rich glioma inactivated 1 (LGI1) cause the most\r\ncommon subtype of autoimmune encephalitis with predominant involvement of the limbic\r\nsystem, associated with seizures and memory deficits. LGI1 and its receptor ADAM22 are part\r\nof a transsynaptic protein complex that includes several proteins involved in presynaptic\r\nneurotransmitter release and postsynaptic glutamate sensing. Autoantibodies against LGI1\r\nincrease excitatory synaptic strength, but studies that genetically disrupt the LGI1-ADAM22\r\ncomplex report a reduction in postsynaptic glutamate receptor-mediated responses. Thus, the\r\nmechanisms underlying the increased synaptic strength induced by LGI1 autoantibodies remain elusive, and the contributions of presynaptic molecules to the LGI1-transsynaptic complex remain unclear. We therefore investigated the presynaptic mechanisms that mediate\r\nautoantibody-induced synaptic strengthening." acknowledged_ssus: - _id: Bio - _id: EM-Fac acknowledgement: 'The authors thank Claudia Sommer for expert technical assistance, the Electron Microscopy Facility of IST-Austria for resources, and Tereza Belinova in the Imaging and Optics Facility of IST-Austria for 3D reconstruction. ' article_processing_charge: Yes article_type: original author: - first_name: Andreas full_name: Ritzau-Jost, Andreas last_name: Ritzau-Jost - first_name: Felix full_name: Gsell, Felix last_name: Gsell - first_name: Josefine full_name: Sell, Josefine last_name: Sell - first_name: Stefan full_name: Sachs, Stefan last_name: Sachs - first_name: Jacqueline-Claire full_name: Montanaro-Punzengruber, Jacqueline-Claire id: 3786AB44-F248-11E8-B48F-1D18A9856A87 last_name: Montanaro-Punzengruber - first_name: Toni full_name: Kirmann, Toni last_name: Kirmann - first_name: Sebastian full_name: Maaß, Sebastian last_name: Maaß - first_name: Sarosh R. full_name: Irani, Sarosh R. last_name: Irani - first_name: Christian full_name: Werner, Christian last_name: Werner - first_name: Christian full_name: Geis, Christian last_name: Geis - first_name: Markus full_name: Sauer, Markus last_name: Sauer - first_name: Ryuichi full_name: Shigemoto, Ryuichi id: 499F3ABC-F248-11E8-B48F-1D18A9856A87 last_name: Shigemoto orcid: 0000-0001-8761-9444 - first_name: Stefan full_name: Hallermann, Stefan last_name: Hallermann citation: ama: Ritzau-Jost A, Gsell F, Sell J, et al. LGI1 autoantibodies enhance synaptic transmission by presynaptic Kv1 loss and increased action potential broadening. Neurology, Neuroimmunology and Neuroinflammation. 2024;11(5):e200284. doi:10.1212/NXI.0000000000200284 apa: Ritzau-Jost, A., Gsell, F., Sell, J., Sachs, S., Montanaro-Punzengruber, J.-C., Kirmann, T., … Hallermann, S. (2024). LGI1 autoantibodies enhance synaptic transmission by presynaptic Kv1 loss and increased action potential broadening. Neurology, Neuroimmunology and Neuroinflammation. Wolters Kluwer. https://doi.org/10.1212/NXI.0000000000200284 chicago: Ritzau-Jost, Andreas, Felix Gsell, Josefine Sell, Stefan Sachs, Jacqueline-Claire Montanaro-Punzengruber, Toni Kirmann, Sebastian Maaß, et al. “LGI1 Autoantibodies Enhance Synaptic Transmission by Presynaptic Kv1 Loss and Increased Action Potential Broadening.” Neurology, Neuroimmunology and Neuroinflammation. Wolters Kluwer, 2024. https://doi.org/10.1212/NXI.0000000000200284. ieee: A. Ritzau-Jost et al., “LGI1 autoantibodies enhance synaptic transmission by presynaptic Kv1 loss and increased action potential broadening,” Neurology, Neuroimmunology and Neuroinflammation, vol. 11, no. 5. Wolters Kluwer, p. e200284, 2024. ista: Ritzau-Jost A, Gsell F, Sell J, Sachs S, Montanaro-Punzengruber J-C, Kirmann T, Maaß S, Irani SR, Werner C, Geis C, Sauer M, Shigemoto R, Hallermann S. 2024. LGI1 autoantibodies enhance synaptic transmission by presynaptic Kv1 loss and increased action potential broadening. Neurology, Neuroimmunology and Neuroinflammation. 11(5), e200284. mla: Ritzau-Jost, Andreas, et al. “LGI1 Autoantibodies Enhance Synaptic Transmission by Presynaptic Kv1 Loss and Increased Action Potential Broadening.” Neurology, Neuroimmunology and Neuroinflammation, vol. 11, no. 5, Wolters Kluwer, 2024, p. e200284, doi:10.1212/NXI.0000000000200284. short: A. Ritzau-Jost, F. Gsell, J. Sell, S. Sachs, J.-C. Montanaro-Punzengruber, T. Kirmann, S. Maaß, S.R. Irani, C. Werner, C. Geis, M. Sauer, R. Shigemoto, S. Hallermann, Neurology, Neuroimmunology and Neuroinflammation 11 (2024) e200284. date_created: 2024-08-25T22:01:07Z date_published: 2024-09-01T00:00:00Z date_updated: 2025-09-08T08:59:37Z day: '01' ddc: - '570' department: - _id: RySh doi: 10.1212/NXI.0000000000200284 external_id: isi: - '001291908600001' pmid: - '39141878' file: - access_level: open_access checksum: 1e6d1230e0387f72752e3268f5330c9e content_type: application/pdf creator: dernst date_created: 2025-01-09T13:42:42Z date_updated: 2025-01-09T13:42:42Z file_id: '18815' file_name: 2024_NeurologyNeuroimmNeuroinflamm_RitzauJost.pdf file_size: 855818 relation: main_file success: 1 file_date_updated: 2025-01-09T13:42:42Z has_accepted_license: '1' intvolume: ' 11' isi: 1 issue: '5' language: - iso: eng month: '09' oa: 1 oa_version: Published Version page: e200284 pmid: 1 project: - _id: 05970B30-7A3F-11EA-A408-12923DDC885E grant_number: I04638 name: LGI1 antibody-induced pathophysiology in synapses publication: Neurology, Neuroimmunology and Neuroinflammation publication_identifier: eissn: - 2332-7812 publication_status: published publisher: Wolters Kluwer quality_controlled: '1' related_material: link: - relation: earlier_version url: https://doi.org/10.1101/2023.10.04.560631 scopus_import: '1' status: public title: LGI1 autoantibodies enhance synaptic transmission by presynaptic Kv1 loss and increased action potential broadening tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 11 year: '2024' ... --- _id: '17458' abstract: - lang: eng text: Changes in gene dosage can have tremendous evolutionary potential (e.g. whole-genome duplications), but without compensatory mechanisms, they can also lead to gene dysregulation and pathologies. Sex chromosomes are a paradigmatic example of naturally occurring gene dosage differences and their compensation. In species with chromosome-based sex determination, individuals within the same population necessarily show ‘natural’ differences in gene dosage for the sex chromosomes. In this Review, we focus on the mammalian X chromosome and discuss recent new insights into the dosage-compensation mechanisms that evolved along with the emergence of sex chromosomes, namely X-inactivation and X-upregulation. We also discuss the evolution of the genetic loci and molecular players involved, as well as the regulatory diversity and potentially different requirements for dosage compensation across mammalian species. acknowledgement: We thank Estelle Nicolas for critical feedback on the manuscript and Ikuhiro Okamoto for critical feedback on the figures. We apologise to authors whose work we overlooked or did not discuss or cite due to limits in the number of references. We thank the anonymous reviewers for pointing us to additional literature and for their constructive feedback. Figures were prepared with BioRender.com. D.C. is supported by a fellowship from Ligue Contre le Cancer (LNCC_TAJT25850) and R.G. holds a tenured research position from the Centre National de la Recherche Scientifique (France). Research in the Galupa lab is supported by a grant from the Fondation pour la Recherche Médicale (AJE202305017142). Open Access funding provided by Fondation pour la Recherche Médicale. Deposited in PMC for immediate release. article_number: dev202891 article_processing_charge: Yes (in subscription journal) article_type: original author: - first_name: Daniela full_name: Cecalev, Daniela last_name: Cecalev - first_name: Beatriz full_name: Vicoso, Beatriz id: 49E1C5C6-F248-11E8-B48F-1D18A9856A87 last_name: Vicoso orcid: 0000-0002-4579-8306 - first_name: Rafael full_name: Galupa, Rafael last_name: Galupa citation: ama: Cecalev D, Vicoso B, Galupa R. Compensation of gene dosage on the mammalian X. Development. 2024;151(15). doi:10.1242/dev.202891 apa: Cecalev, D., Vicoso, B., & Galupa, R. (2024). Compensation of gene dosage on the mammalian X. Development. The Company of Biologists. https://doi.org/10.1242/dev.202891 chicago: Cecalev, Daniela, Beatriz Vicoso, and Rafael Galupa. “Compensation of Gene Dosage on the Mammalian X.” Development. The Company of Biologists, 2024. https://doi.org/10.1242/dev.202891. ieee: D. Cecalev, B. Vicoso, and R. Galupa, “Compensation of gene dosage on the mammalian X,” Development, vol. 151, no. 15. The Company of Biologists, 2024. ista: Cecalev D, Vicoso B, Galupa R. 2024. Compensation of gene dosage on the mammalian X. Development. 151(15), dev202891. mla: Cecalev, Daniela, et al. “Compensation of Gene Dosage on the Mammalian X.” Development, vol. 151, no. 15, dev202891, The Company of Biologists, 2024, doi:10.1242/dev.202891. short: D. Cecalev, B. Vicoso, R. Galupa, Development 151 (2024). date_created: 2024-08-25T22:01:07Z date_published: 2024-08-14T00:00:00Z date_updated: 2025-09-08T08:58:58Z day: '14' ddc: - '599' department: - _id: BeVi doi: 10.1242/dev.202891 external_id: isi: - '001292608800003' pmid: - '39140247' file: - access_level: open_access checksum: 5e428bda0440d3f957c694b315a8f2a9 content_type: application/pdf creator: cchlebak date_created: 2024-08-28T10:32:16Z date_updated: 2024-08-28T10:32:16Z file_id: '17464' file_name: 2024_Development_Cecalev.pdf file_size: 2085135 relation: main_file success: 1 file_date_updated: 2024-08-28T10:32:16Z has_accepted_license: '1' intvolume: ' 151' isi: 1 issue: '15' language: - iso: eng month: '08' oa: 1 oa_version: Published Version pmid: 1 publication: Development publication_identifier: eissn: - 1477-9129 issn: - 0950-1991 publication_status: published publisher: The Company of Biologists quality_controlled: '1' scopus_import: '1' status: public title: Compensation of gene dosage on the mammalian X tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 151 year: '2024' ... --- APC_amount: 12348 EUR OA_place: publisher OA_type: hybrid _id: '17460' abstract: - lang: eng text: Filaments in the cell commonly treadmill. Driven by energy consumption, they grow on one end while shrinking on the other, causing filaments to appear motile even though individual proteins remain static. This process is characteristic of cytoskeletal filaments and leads to collective filament self-organization. Here we show that treadmilling drives filament nematic ordering by dissolving misaligned filaments. Taking the bacterial FtsZ protein involved in cell division as an example, we show that this mechanism aligns FtsZ filaments in vitro and drives the organization of the division ring in living Bacillus subtilis cells. We find that ordering via local dissolution also allows the system to quickly respond to chemical and geometrical biases in the cell, enabling us to quantitatively explain the ring formation dynamics in vivo. Beyond FtsZ and other cytoskeletal filaments, our study identifies a mechanism for self-organization via constant birth and death of energy-consuming filaments. acknowledgement: We thank I. Palaia (ISTA) for useful discussions and K. Lim and R. W. Wong (WPI-Nano Life Science Institute, Kanazawa University) for providing access to HS-AFM. We would like to thank B. Prats Mateu (MSD Austria, Vienna) for providing the HS-AFM data. This work was supported by the Royal Society (grant no. UF160266; C.V.-C. and A.Š.), the European Union’s Horizon 2020 Research and Innovation Programme (grant no. 802960; A.Š.), the Austrian Science Fund (FWF) Stand-Alone P34607 (M.L.) and a Wellcome Trust and Royal Society Sir Henry Dale Fellowship (grant no. 206670/Z/17/Z; S.H. and K.D.W.). article_processing_charge: Yes (in subscription journal) article_type: original author: - first_name: Christian Eduardo full_name: Vanhille-Campos, Christian Eduardo id: 3adeca52-9313-11ed-b1ac-c170b2505714 last_name: Vanhille-Campos - first_name: Kevin D. full_name: Whitley, Kevin D. last_name: Whitley - first_name: Philipp full_name: Radler, Philipp id: 40136C2A-F248-11E8-B48F-1D18A9856A87 last_name: Radler orcid: '0000-0001-9198-2182 ' - first_name: Martin full_name: Loose, Martin id: 462D4284-F248-11E8-B48F-1D18A9856A87 last_name: Loose orcid: 0000-0001-7309-9724 - first_name: Séamus full_name: Holden, Séamus last_name: Holden - first_name: Anđela full_name: Šarić, Anđela id: bf63d406-f056-11eb-b41d-f263a6566d8b last_name: Šarić orcid: 0000-0002-7854-2139 citation: ama: Vanhille-Campos CE, Whitley KD, Radler P, Loose M, Holden S, Šarić A. Self-organization of mortal filaments and its role in bacterial division ring formation. Nature Physics. 2024;20:1670-1678. doi:10.1038/s41567-024-02597-8 apa: Vanhille-Campos, C. E., Whitley, K. D., Radler, P., Loose, M., Holden, S., & Šarić, A. (2024). Self-organization of mortal filaments and its role in bacterial division ring formation. Nature Physics. Springer Nature. https://doi.org/10.1038/s41567-024-02597-8 chicago: Vanhille-Campos, Christian Eduardo, Kevin D. Whitley, Philipp Radler, Martin Loose, Séamus Holden, and Anđela Šarić. “Self-Organization of Mortal Filaments and Its Role in Bacterial Division Ring Formation.” Nature Physics. Springer Nature, 2024. https://doi.org/10.1038/s41567-024-02597-8. ieee: C. E. Vanhille-Campos, K. D. Whitley, P. Radler, M. Loose, S. Holden, and A. Šarić, “Self-organization of mortal filaments and its role in bacterial division ring formation,” Nature Physics, vol. 20. Springer Nature, pp. 1670–1678, 2024. ista: Vanhille-Campos CE, Whitley KD, Radler P, Loose M, Holden S, Šarić A. 2024. Self-organization of mortal filaments and its role in bacterial division ring formation. Nature Physics. 20, 1670–1678. mla: Vanhille-Campos, Christian Eduardo, et al. “Self-Organization of Mortal Filaments and Its Role in Bacterial Division Ring Formation.” Nature Physics, vol. 20, Springer Nature, 2024, pp. 1670–78, doi:10.1038/s41567-024-02597-8. short: C.E. Vanhille-Campos, K.D. Whitley, P. Radler, M. Loose, S. Holden, A. Šarić, Nature Physics 20 (2024) 1670–1678. corr_author: '1' date_created: 2024-08-25T22:01:08Z date_published: 2024-10-01T00:00:00Z date_updated: 2025-09-08T09:02:20Z day: '01' ddc: - '570' department: - _id: AnSa - _id: MaLo doi: 10.1038/s41567-024-02597-8 ec_funded: 1 external_id: isi: - '001289394500005' pmid: - '39416851' file: - access_level: open_access checksum: c4842152e2b90d67f48ea8c9ed7c473b content_type: application/pdf creator: dernst date_created: 2025-04-14T06:06:35Z date_updated: 2025-04-14T06:06:35Z file_id: '19556' file_name: 2024_NaturePhysics_VanhilleCampos.pdf file_size: 8058249 relation: main_file success: 1 file_date_updated: 2025-04-14T06:06:35Z has_accepted_license: '1' intvolume: ' 20' isi: 1 language: - iso: eng month: '10' oa: 1 oa_version: Published Version page: 1670-1678 pmid: 1 project: - _id: fc38323b-9c52-11eb-aca3-ff8afb4a011d grant_number: P34607 name: In vitro reconstitution of bacterial cell division - _id: eba2549b-77a9-11ec-83b8-a81e493eae4e call_identifier: H2020 grant_number: '802960' name: 'Non-Equilibrium Protein Assembly: from Building Blocks to Biological Machines' publication: Nature Physics publication_identifier: eissn: - 1745-2481 issn: - 1745-2473 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: Self-organization of mortal filaments and its role in bacterial division ring formation tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 20 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '17461' abstract: - lang: eng text: Socially living animals can counteract disease through cooperative defences, leading to social immunity that collectively exceeds the sum of individual defences. In superorganismal colonies of social insects with permanent caste separation between reproductive queen(s) and nonreproducing workers, workers are obligate altruists and thus engage in unconditional social immunity, including highly specialised and self-sacrificial hygiene behaviours. Contrastingly, cooperation is facultative in cooperatively breeding families, where all members are reproductively totipotent but offspring transiently forgo reproduction to help their parents rear more siblings. Here, helpers should either express condition-dependent social immunity or disperse to pursue independent reproduction. We advocate inclusive fitness theory as a framework to predict when and how indirect fitness gains may outweigh direct fitness costs, thus favouring conditional social immunity. acknowledgement: We thank Koos Boomsma and two anonymous reviewers for their constructive comments on the manuscript. article_processing_charge: Yes (via OA deal) article_type: original author: - first_name: Sylvia full_name: Cremer, Sylvia id: 2F64EC8C-F248-11E8-B48F-1D18A9856A87 last_name: Cremer orcid: 0000-0002-2193-3868 - first_name: Christopher full_name: Pull, Christopher id: 3C7F4840-F248-11E8-B48F-1D18A9856A87 last_name: Pull orcid: 0000-0003-1122-3982 citation: ama: Cremer S, Pull C. Unconditional versus condition-dependent social immunity. Trends in Parasitology. 2024;40(9):780-787. doi:10.1016/j.pt.2024.07.014 apa: Cremer, S., & Pull, C. (2024). Unconditional versus condition-dependent social immunity. Trends in Parasitology. Elsevier. https://doi.org/10.1016/j.pt.2024.07.014 chicago: Cremer, Sylvia, and Christopher Pull. “Unconditional versus Condition-Dependent Social Immunity.” Trends in Parasitology. Elsevier, 2024. https://doi.org/10.1016/j.pt.2024.07.014. ieee: S. Cremer and C. Pull, “Unconditional versus condition-dependent social immunity,” Trends in Parasitology, vol. 40, no. 9. Elsevier, pp. 780–787, 2024. ista: Cremer S, Pull C. 2024. Unconditional versus condition-dependent social immunity. Trends in Parasitology. 40(9), 780–787. mla: Cremer, Sylvia, and Christopher Pull. “Unconditional versus Condition-Dependent Social Immunity.” Trends in Parasitology, vol. 40, no. 9, Elsevier, 2024, pp. 780–87, doi:10.1016/j.pt.2024.07.014. short: S. Cremer, C. Pull, Trends in Parasitology 40 (2024) 780–787. corr_author: '1' date_created: 2024-08-25T22:01:08Z date_published: 2024-09-01T00:00:00Z date_updated: 2025-09-08T09:01:42Z day: '01' ddc: - '570' department: - _id: SyCr doi: 10.1016/j.pt.2024.07.014 external_id: isi: - '001307815700001' pmid: - '39152078' file: - access_level: open_access checksum: 362fc994e5df66caf3025b7dc437b647 content_type: application/pdf creator: dernst date_created: 2025-01-09T13:46:05Z date_updated: 2025-01-09T13:46:05Z file_id: '18816' file_name: 2024_TrendsParasitology_Cremer.pdf file_size: 1068464 relation: main_file success: 1 file_date_updated: 2025-01-09T13:46:05Z has_accepted_license: '1' intvolume: ' 40' isi: 1 issue: '9' language: - iso: eng month: '09' oa: 1 oa_version: Published Version page: 780-787 pmid: 1 publication: Trends in Parasitology publication_identifier: eissn: - 1471-5007 issn: - 1471-4922 publication_status: published publisher: Elsevier quality_controlled: '1' scopus_import: '1' status: public title: Unconditional versus condition-dependent social immunity tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 40 year: '2024' ... --- OA_place: repository OA_type: green _id: '17462' abstract: - lang: eng text: We are interested in numerical algorithms for computing the electrical field generated by a charge distribution localized on scale l in an infinite heterogeneous correlated random medium, in a situation where the medium is only known in a box of diameter L >>l around the support of the charge. We show that the algorithm in [J. Lu, F. Otto, and L. Wang, Optimal Artificial Boundary Conditions Based on Second-Order Correctors for Three Dimensional Random Ellilptic Media, preprint, arXiv:2109.01616, 2021], suggesting optimal Dirichlet boundary conditions motivated by the multipole expansion [P. Bella, A. Giunti, and F. Otto, Comm. Partial Differential Equations, 45 (2020), pp. 561–640], still performs well in correlated media. With overwhelming probability, we obtain a convergence rate in terms of l, L, and the size of the correlations for which optimality is supported with numerical simulations. These estimates are provided for ensembles which satisfy a multiscale logarithmic Sobolev inequality, where our main tool is an extension of the semigroup estimates in [N. Clozeau, Stoch. Partial Differ. Equ. Anal. Comput., 11 (2023), pp. 1254–1378]. As part of our strategy, we construct sublinear second-order correctors in this correlated setting, which is of independent interest. acknowledgement: We would like to thank our affiliations, Institute of Science and Technology Austria and Max Planck Institute for Mathematics in the Sciences, for supporting the authors’ visits to each other, which greatly facilitated this work. We would like to thank Marc Josien and Quinn Winters for assistance in numerical implementation. article_processing_charge: No article_type: original arxiv: 1 author: - first_name: Nicolas full_name: Clozeau, Nicolas id: fea1b376-906f-11eb-847d-b2c0cf46455b last_name: Clozeau - first_name: Lihan full_name: Wang, Lihan last_name: Wang citation: ama: Clozeau N, Wang L. Artificial boundary conditions for random elliptic systems with correlated coefficient field. Multiscale Modeling and Simulation. 2024;22(3):973-1029. doi:10.1137/23M1603819 apa: Clozeau, N., & Wang, L. (2024). Artificial boundary conditions for random elliptic systems with correlated coefficient field. Multiscale Modeling and Simulation. Society for Industrial and Applied Mathematics. https://doi.org/10.1137/23M1603819 chicago: Clozeau, Nicolas, and Lihan Wang. “Artificial Boundary Conditions for Random Elliptic Systems with Correlated Coefficient Field.” Multiscale Modeling and Simulation. Society for Industrial and Applied Mathematics, 2024. https://doi.org/10.1137/23M1603819. ieee: N. Clozeau and L. Wang, “Artificial boundary conditions for random elliptic systems with correlated coefficient field,” Multiscale Modeling and Simulation, vol. 22, no. 3. Society for Industrial and Applied Mathematics, pp. 973–1029, 2024. ista: Clozeau N, Wang L. 2024. Artificial boundary conditions for random elliptic systems with correlated coefficient field. Multiscale Modeling and Simulation. 22(3), 973–1029. mla: Clozeau, Nicolas, and Lihan Wang. “Artificial Boundary Conditions for Random Elliptic Systems with Correlated Coefficient Field.” Multiscale Modeling and Simulation, vol. 22, no. 3, Society for Industrial and Applied Mathematics, 2024, pp. 973–1029, doi:10.1137/23M1603819. short: N. Clozeau, L. Wang, Multiscale Modeling and Simulation 22 (2024) 973–1029. corr_author: '1' date_created: 2024-08-25T22:01:08Z date_published: 2024-09-01T00:00:00Z date_updated: 2025-09-08T09:01:00Z day: '01' department: - _id: JuFi doi: 10.1137/23M1603819 ec_funded: 1 external_id: arxiv: - '2309.06798' isi: - '001285416500001' intvolume: ' 22' isi: 1 issue: '3' language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.48550/arXiv.2309.06798 month: '09' oa: 1 oa_version: Preprint page: 973-1029 project: - _id: 0aa76401-070f-11eb-9043-b5bb049fa26d call_identifier: H2020 grant_number: '948819' name: Bridging Scales in Random Materials publication: Multiscale Modeling and Simulation publication_identifier: eissn: - 1540-3467 issn: - 1540-3459 publication_status: published publisher: Society for Industrial and Applied Mathematics quality_controlled: '1' scopus_import: '1' status: public title: Artificial boundary conditions for random elliptic systems with correlated coefficient field type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 22 year: '2024' ... --- _id: '17463' abstract: - lang: eng text: Allosteric modulation of protein function, wherein the binding of an effector to a protein triggers conformational changes at distant functional sites, plays a central part in the control of metabolism and cell signalling1,2,3. There has been considerable interest in designing allosteric systems, both to gain insight into the mechanisms underlying such ‘action at a distance’ modulation and to create synthetic proteins whose functions can be regulated by effectors4,5,6,7. However, emulating the subtle conformational changes distributed across many residues, characteristic of natural allosteric proteins, is a significant challenge8,9. Here, inspired by the classic Monod–Wyman–Changeux model of cooperativity10, we investigate the de novo design of allostery through rigid-body coupling of peptide-switchable hinge modules11 to protein interfaces12 that direct the formation of alternative oligomeric states. We find that this approach can be used to generate a wide variety of allosterically switchable systems, including cyclic rings that incorporate or eject subunits in response to peptide binding and dihedral cages that undergo effector-induced disassembly. Size-exclusion chromatography, mass photometry13 and electron microscopy reveal that these designed allosteric protein assemblies closely resemble the design models in both the presence and absence of peptide effectors and can have ligand-binding cooperativity comparable to classic natural systems such as haemoglobin14. Our results indicate that allostery can arise from global coupling of the energetics of protein substructures without optimized side-chain–side-chain allosteric communication pathways and provide a roadmap for generating allosterically triggerable delivery systems, protein nanomachines and cellular feedback control circuitry. acknowledgement: We thank D. D. Sahtoe, R. D. Kiber, Y. Hsia, N. Bethel and A. Favor for helpful discussions and K. VanWormer and L. Goldschmidt for technical support. We also thank X. Li and M. Lamb for mass spectrometry support. This work was supported by the Washington Research Foundation Postdoctoral Fellowship (grant no. GR027504, A. Pillai), a National Science Foundation Graduate Research Fellowship (grant no. DGE-2140004, A.I.), a Human Frontier Science Program Long Term Fellowship (grant no. LT000880/2019, F.P.), the Audacious Project at the Institute for Protein Design (A.B., A. Pillai, A. Philomin, A.I. and D.B.), a National Energy Research Scientific Computing Centre award (grant no. BER-ERCAP0022018), the Howard Hughes Medical Institute (D.B.), the Open Philanthropy Project Improving Protein Design Fund (P.J.Y.L., C.D. and D.B.) a gift from Microsoft (D.B.) and a grant from DARPA supporting the Harnessing Enzymatic Activity for Lifesaving Remedies programme (grant no. HR001120S0052, contract no. HR0011-21-2-0012, D.B.). article_processing_charge: Yes (in subscription journal) article_type: original author: - first_name: Arvind full_name: Pillai, Arvind last_name: Pillai - first_name: Abbas full_name: Idris, Abbas last_name: Idris - first_name: Annika full_name: Philomin, Annika last_name: Philomin - first_name: Connor full_name: Weidle, Connor last_name: Weidle - first_name: Rebecca full_name: Skotheim, Rebecca last_name: Skotheim - first_name: Philip J.Y. full_name: Leung, Philip J.Y. last_name: Leung - first_name: Adam full_name: Broerman, Adam last_name: Broerman - first_name: Cullen full_name: Demakis, Cullen last_name: Demakis - first_name: Andrew J. full_name: Borst, Andrew J. last_name: Borst - first_name: Florian M full_name: Praetorius, Florian M id: dfec9381-4341-11ee-8fd8-faa02bba7d62 last_name: Praetorius - first_name: David full_name: Baker, David last_name: Baker citation: ama: Pillai A, Idris A, Philomin A, et al. De novo design of allosterically switchable protein assemblies. Nature. 2024;632:911–920. doi:10.1038/s41586-024-07813-2 apa: Pillai, A., Idris, A., Philomin, A., Weidle, C., Skotheim, R., Leung, P. J. Y., … Baker, D. (2024). De novo design of allosterically switchable protein assemblies. Nature. Springer Nature. https://doi.org/10.1038/s41586-024-07813-2 chicago: Pillai, Arvind, Abbas Idris, Annika Philomin, Connor Weidle, Rebecca Skotheim, Philip J.Y. Leung, Adam Broerman, et al. “De Novo Design of Allosterically Switchable Protein Assemblies.” Nature. Springer Nature, 2024. https://doi.org/10.1038/s41586-024-07813-2. ieee: A. Pillai et al., “De novo design of allosterically switchable protein assemblies,” Nature, vol. 632. Springer Nature, pp. 911–920, 2024. ista: Pillai A, Idris A, Philomin A, Weidle C, Skotheim R, Leung PJY, Broerman A, Demakis C, Borst AJ, Praetorius FM, Baker D. 2024. De novo design of allosterically switchable protein assemblies. Nature. 632, 911–920. mla: Pillai, Arvind, et al. “De Novo Design of Allosterically Switchable Protein Assemblies.” Nature, vol. 632, Springer Nature, 2024, pp. 911–920, doi:10.1038/s41586-024-07813-2. short: A. Pillai, A. Idris, A. Philomin, C. Weidle, R. Skotheim, P.J.Y. Leung, A. Broerman, C. Demakis, A.J. Borst, F.M. Praetorius, D. Baker, Nature 632 (2024) 911–920. corr_author: '1' date_created: 2024-08-25T22:01:08Z date_published: 2024-08-22T00:00:00Z date_updated: 2025-09-08T09:00:16Z day: '22' ddc: - '570' department: - _id: FlPr doi: 10.1038/s41586-024-07813-2 external_id: isi: - '001300534300019' pmid: - '39143214' file: - access_level: open_access checksum: 39127601621a360ec0edc538627eb211 content_type: application/pdf creator: dernst date_created: 2024-09-09T12:01:14Z date_updated: 2024-09-09T12:01:14Z file_id: '18005' file_name: 2024_Nature_Pillai.pdf file_size: 16572040 relation: main_file success: 1 file_date_updated: 2024-09-09T12:01:14Z has_accepted_license: '1' intvolume: ' 632' isi: 1 language: - iso: eng license: https://creativecommons.org/licenses/by-nc-nd/4.0/ month: '08' oa: 1 oa_version: Published Version page: '911–920 ' pmid: 1 publication: Nature publication_identifier: eissn: - 1476-4687 issn: - 0028-0836 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: De novo design of allosterically switchable protein assemblies tmp: image: /images/cc_by_nc_nd.png legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0) short: CC BY-NC-ND (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 632 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '17474' abstract: - lang: eng text: Entropic risk (ERisk) is an established risk measure in finance, quantifying risk by an exponential re-weighting of rewards. We study ERisk for the first time in the context of turn-based stochastic games with the total reward objective. This gives rise to an objective function that demands the control of systems in a risk-averse manner. We show that the resulting games are determined and, in particular, admit optimal memoryless deterministic strategies. This contrasts risk measures that previously have been considered in the special case of Markov decision processes and that require randomization and/or memory. We provide several results on the decidability and the computational complexity of the threshold problem, i.e. whether the optimal value of ERisk exceeds a given threshold. Furthermore, an approximation algorithm for the optimal value of ERisk is provided. acknowledgement: Krishnendu Chatterjee reports financial support was provided by European Research Council. article_number: '105214' article_processing_charge: Yes (in subscription journal) article_type: original arxiv: 1 author: - first_name: Christel full_name: Baier, Christel last_name: Baier - first_name: Krishnendu full_name: Chatterjee, Krishnendu id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87 last_name: Chatterjee orcid: 0000-0002-4561-241X - first_name: Tobias full_name: Meggendorfer, Tobias id: b21b0c15-30a2-11eb-80dc-f13ca25802e1 last_name: Meggendorfer orcid: 0000-0002-1712-2165 - first_name: Jakob full_name: Piribauer, Jakob last_name: Piribauer citation: ama: Baier C, Chatterjee K, Meggendorfer T, Piribauer J. Entropic risk for turn-based stochastic games. Information and Computation. 2024;301. doi:10.1016/j.ic.2024.105214 apa: Baier, C., Chatterjee, K., Meggendorfer, T., & Piribauer, J. (2024). Entropic risk for turn-based stochastic games. Information and Computation. Elsevier. https://doi.org/10.1016/j.ic.2024.105214 chicago: Baier, Christel, Krishnendu Chatterjee, Tobias Meggendorfer, and Jakob Piribauer. “Entropic Risk for Turn-Based Stochastic Games.” Information and Computation. Elsevier, 2024. https://doi.org/10.1016/j.ic.2024.105214. ieee: C. Baier, K. Chatterjee, T. Meggendorfer, and J. Piribauer, “Entropic risk for turn-based stochastic games,” Information and Computation, vol. 301. Elsevier, 2024. ista: Baier C, Chatterjee K, Meggendorfer T, Piribauer J. 2024. Entropic risk for turn-based stochastic games. Information and Computation. 301, 105214. mla: Baier, Christel, et al. “Entropic Risk for Turn-Based Stochastic Games.” Information and Computation, vol. 301, 105214, Elsevier, 2024, doi:10.1016/j.ic.2024.105214. short: C. Baier, K. Chatterjee, T. Meggendorfer, J. Piribauer, Information and Computation 301 (2024). corr_author: '1' date_created: 2024-09-01T22:01:07Z date_published: 2024-12-01T00:00:00Z date_updated: 2025-09-08T09:10:06Z day: '01' ddc: - '000' department: - _id: KrCh doi: 10.1016/j.ic.2024.105214 external_id: arxiv: - '2307.06611' isi: - '001301143400001' file: - access_level: open_access checksum: f68e0c2f46f9b9c86815406bcf2ee2d4 content_type: application/pdf creator: dernst date_created: 2025-01-09T13:49:03Z date_updated: 2025-01-09T13:49:03Z file_id: '18817' file_name: 2024_InformationComputation_Baier.pdf file_size: 724703 relation: main_file success: 1 file_date_updated: 2025-01-09T13:49:03Z has_accepted_license: '1' intvolume: ' 301' isi: 1 language: - iso: eng month: '12' oa: 1 oa_version: Published Version publication: Information and Computation publication_identifier: eissn: - 1090-2651 issn: - 0890-5401 publication_status: published publisher: Elsevier quality_controlled: '1' related_material: record: - id: '14417' relation: earlier_version status: public scopus_import: '1' status: public title: Entropic risk for turn-based stochastic games tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 301 year: '2024' ... --- _id: '17475' abstract: - lang: eng text: "As a discrete analogue of Kac’s celebrated question on ‘hearing the shape of a drum’ and towards a practical\r\ngraph isomorphism test, it is of interest to understand which graphs are determined up to isomorphism by\r\ntheir spectrum (of their adjacency matrix). A striking conjecture in this area, due to van Dam and Haemers,\r\nis that ‘almost all graphs are determined by their spectrum’, meaning that the fraction of unlabelled n-vertex\r\ngraphs which are determined by their spectrum converges to 1 as n → ∞.\r\nIn this paper, we make a step towards this conjecture, showing that there are exponentially many n-vertex\r\ngraphs which are determined by their spectrum. This improves on previous bounds (of shape e\r\nc\r\n√\r\nn\r\n). We also\r\npropose a number of further directions of research.\r\n" acknowledgement: Matthew Kwan was supported by ERC Starting Grant ‘RANDSTRUCT’ No. 101076777. article_processing_charge: Yes (via OA deal) article_type: original arxiv: 1 author: - first_name: Illya full_name: Koval, Illya id: 2eed1f3b-896a-11ed-bdf8-93c7c4bf159e last_name: Koval - first_name: Matthew Alan full_name: Kwan, Matthew Alan id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3 last_name: Kwan orcid: 0000-0002-4003-7567 citation: ama: Koval I, Kwan MA. Exponentially many graphs are determined by their spectrum. Quarterly Journal of Mathematics. 2024;75(3):869-899. doi:10.1093/qmath/haae030 apa: Koval, I., & Kwan, M. A. (2024). Exponentially many graphs are determined by their spectrum. Quarterly Journal of Mathematics. Oxford University Press. https://doi.org/10.1093/qmath/haae030 chicago: Koval, Illya, and Matthew Alan Kwan. “Exponentially Many Graphs Are Determined by Their Spectrum.” Quarterly Journal of Mathematics. Oxford University Press, 2024. https://doi.org/10.1093/qmath/haae030. ieee: I. Koval and M. A. Kwan, “Exponentially many graphs are determined by their spectrum,” Quarterly Journal of Mathematics, vol. 75, no. 3. Oxford University Press, pp. 869–899, 2024. ista: Koval I, Kwan MA. 2024. Exponentially many graphs are determined by their spectrum. Quarterly Journal of Mathematics. 75(3), 869–899. mla: Koval, Illya, and Matthew Alan Kwan. “Exponentially Many Graphs Are Determined by Their Spectrum.” Quarterly Journal of Mathematics, vol. 75, no. 3, Oxford University Press, 2024, pp. 869–99, doi:10.1093/qmath/haae030. short: I. Koval, M.A. Kwan, Quarterly Journal of Mathematics 75 (2024) 869–899. corr_author: '1' date_created: 2024-09-01T22:01:07Z date_published: 2024-06-19T00:00:00Z date_updated: 2025-09-08T09:09:41Z day: '19' ddc: - '500' department: - _id: MaKw - _id: VaKa doi: 10.1093/qmath/haae030 external_id: arxiv: - '2309.09788' isi: - '001249741500001' file: - access_level: open_access checksum: abf200d37ad69e6f2c0750a30296ad97 content_type: application/pdf creator: cchlebak date_created: 2024-09-06T12:23:57Z date_updated: 2024-09-06T12:23:57Z file_id: '17851' file_name: 2024_QuJofMath_Koval.pdf file_size: 946411 relation: main_file success: 1 file_date_updated: 2024-09-06T12:23:57Z has_accepted_license: '1' intvolume: ' 75' isi: 1 issue: '3' language: - iso: eng month: '06' oa: 1 oa_version: Published Version page: 869-899 project: - _id: bd95085b-d553-11ed-ba76-e55d3349be45 grant_number: '101076777' name: Randomness and structure in combinatorics publication: Quarterly Journal of Mathematics publication_identifier: eissn: - 1464-3847 issn: - 0033-5606 publication_status: published publisher: Oxford University Press quality_controlled: '1' scopus_import: '1' status: public title: Exponentially many graphs are determined by their spectrum tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 75 year: '2024' ... --- _id: '17476' abstract: - lang: eng text: "Lead halide perovskites have recently been reported to demonstrate an exceptionally high nonlinear (Kerr) refractive index n2 of up to 10−8cm2/W in CH3⁢NH3⁢PbBr3. Other researchers, however, observe different, substantially more conservative numbers. In order to resolve this disagreement, the nonlinear Kerr index of a bulk sample of lead halide perovskite was measured directly by means of an interferometer. This approach has many advantages as compared to the more standard z-scan technique. In particular, this method allows studying the induced changes to the refractive index in a time-resolved manner, thus enabling to separate the different contributions to \U0001D45B2. The extracted \U0001D45B2 values for CsPbBr3 and MAPbBr3 at \U0001D706≈1µ⁢m are \U0001D45B2=+2.1×10−14cm2/W and \U0001D45B2=+6×10−15cm2/W, respectively. Hence, these values are substantially lower than what has been indicated in most of the previous reports, implying the latter one should be regarded with great care." acknowledgement: "We gratefully acknowledge the assistance of Prof. John\r\nDudley." article_number: '085403' article_processing_charge: No article_type: original author: - first_name: Dusan full_name: Lorenc, Dusan id: 40D8A3E6-F248-11E8-B48F-1D18A9856A87 last_name: Lorenc - first_name: Ayan full_name: Zhumekenov, Ayan last_name: Zhumekenov - first_name: Osman M. full_name: Bakr, Osman M. last_name: Bakr - first_name: Zhanybek full_name: Alpichshev, Zhanybek id: 45E67A2A-F248-11E8-B48F-1D18A9856A87 last_name: Alpichshev orcid: 0000-0002-7183-5203 citation: ama: 'Lorenc D, Zhumekenov A, Bakr OM, Alpichshev Z. No extraordinary χ(3) in lead-halide perovskites: Placing an upper bound on Kerr nonlinearity by means of time-resolved interferometry. Physical Review Materials. 2024;8(8). doi:10.1103/PhysRevMaterials.8.085403' apa: 'Lorenc, D., Zhumekenov, A., Bakr, O. M., & Alpichshev, Z. (2024). No extraordinary χ(3) in lead-halide perovskites: Placing an upper bound on Kerr nonlinearity by means of time-resolved interferometry. Physical Review Materials. American Physical Society. https://doi.org/10.1103/PhysRevMaterials.8.085403' chicago: 'Lorenc, Dusan, Ayan Zhumekenov, Osman M. Bakr, and Zhanybek Alpichshev. “No Extraordinary χ(3) in Lead-Halide Perovskites: Placing an Upper Bound on Kerr Nonlinearity by Means of Time-Resolved Interferometry.” Physical Review Materials. American Physical Society, 2024. https://doi.org/10.1103/PhysRevMaterials.8.085403.' ieee: 'D. Lorenc, A. Zhumekenov, O. M. Bakr, and Z. Alpichshev, “No extraordinary χ(3) in lead-halide perovskites: Placing an upper bound on Kerr nonlinearity by means of time-resolved interferometry,” Physical Review Materials, vol. 8, no. 8. American Physical Society, 2024.' ista: 'Lorenc D, Zhumekenov A, Bakr OM, Alpichshev Z. 2024. No extraordinary χ(3) in lead-halide perovskites: Placing an upper bound on Kerr nonlinearity by means of time-resolved interferometry. Physical Review Materials. 8(8), 085403.' mla: 'Lorenc, Dusan, et al. “No Extraordinary χ(3) in Lead-Halide Perovskites: Placing an Upper Bound on Kerr Nonlinearity by Means of Time-Resolved Interferometry.” Physical Review Materials, vol. 8, no. 8, 085403, American Physical Society, 2024, doi:10.1103/PhysRevMaterials.8.085403.' short: D. Lorenc, A. Zhumekenov, O.M. Bakr, Z. Alpichshev, Physical Review Materials 8 (2024). corr_author: '1' date_created: 2024-09-01T22:01:08Z date_published: 2024-08-23T00:00:00Z date_updated: 2025-09-08T09:06:34Z day: '23' department: - _id: ZhAl doi: 10.1103/PhysRevMaterials.8.085403 external_id: isi: - '001299497800001' intvolume: ' 8' isi: 1 issue: '8' language: - iso: eng month: '08' oa_version: None publication: Physical Review Materials publication_identifier: eissn: - 2475-9953 publication_status: published publisher: American Physical Society quality_controlled: '1' scopus_import: '1' status: public title: 'No extraordinary χ(3) in lead-halide perovskites: Placing an upper bound on Kerr nonlinearity by means of time-resolved interferometry' type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 8 year: '2024' ... --- DOAJ_listed: '1' _id: '17477' abstract: - lang: eng text: Trapped-ion systems are a leading platform for quantum information processing, but they are currently limited to 1D and 2D arrays, which imposes restrictions on both their scalability and their range of applications. Here, we propose a path to overcome this limitation by demonstrating that Penning traps can be used to realize remarkably clean bilayer crystals, wherein hundreds of ions self-organize into two well-defined layers. These bilayer crystals are made possible by the inclusion of an anharmonic trapping potential, which is readily implementable with current technology. We study the normal modes of this system and discover salient differences compared to the modes of single-plane crystals. The bilayer geometry and the unique properties of the normal modes open new opportunities—in particular, in quantum sensing and quantum simulation—that are not straightforward in single-plane crystals. Furthermore, we illustrate that it may be possible to extend the ideas presented here to realize multilayer crystals with more than two layers. Our work increases the dimensionality of trapped-ion systems by efficiently utilizing all three spatial dimensions, and it lays the foundation for a new generation of quantum information processing experiments with multilayer 3D crystals of trapped ions. acknowledgement: We thank M. Miskeen Khan, Jennifer Lilieholm, and Wes Johnson for a careful reading and feedback on the manuscript. We acknowledge discussions with Dan Dubin, John Zaris, and Scott Parker. S. H. acknowledges the support of Kishore Vaigyanik Protsahan Yojana, Department of Science and Technology, Government of India. A. S. acknowledges the support of a C. V. Raman post-doctoral fellowship. A. L. C., A. M. R., and J. J. B. acknowledge funding from the U.S. Department of Energy, Office of Science, NQI Science Research Centers, Quantum Systems Accelerator (QSA), a collaboration between the U.S. Department of Energy, Office of Science and other agencies. A. M. R. acknowledges additional support from VBFF, ARO Grant No. W911NF-24-1-0128, by the NSF Grants No. JILA-PFC PHY-2317149 and No. QLCI-OMA-2016244, and by NIST. J. J. B. acknowledges additional support from the DARPA ONISQ program and AFOSR Grant No. FA9550-201-0019. article_number: '031030' article_processing_charge: Yes article_type: original arxiv: 1 author: - first_name: Samarth full_name: Hawaldar, Samarth id: 221708e1-1ff6-11ee-9fa6-85146607433e last_name: Hawaldar orcid: 0000-0002-1965-4309 - first_name: Prakriti full_name: Shahi, Prakriti last_name: Shahi - first_name: Allison L. full_name: Carter, Allison L. last_name: Carter - first_name: Ana Maria full_name: Rey, Ana Maria last_name: Rey - first_name: John J. full_name: Bollinger, John J. last_name: Bollinger - first_name: Athreya full_name: Shankar, Athreya last_name: Shankar citation: ama: Hawaldar S, Shahi P, Carter AL, Rey AM, Bollinger JJ, Shankar A. Bilayer crystals of trapped ions for quantum information processing. Physical Review X. 2024;14(3). doi:10.1103/PhysRevX.14.031030 apa: Hawaldar, S., Shahi, P., Carter, A. L., Rey, A. M., Bollinger, J. J., & Shankar, A. (2024). Bilayer crystals of trapped ions for quantum information processing. Physical Review X. American Physical Society. https://doi.org/10.1103/PhysRevX.14.031030 chicago: Hawaldar, Samarth, Prakriti Shahi, Allison L. Carter, Ana Maria Rey, John J. Bollinger, and Athreya Shankar. “Bilayer Crystals of Trapped Ions for Quantum Information Processing.” Physical Review X. American Physical Society, 2024. https://doi.org/10.1103/PhysRevX.14.031030. ieee: S. Hawaldar, P. Shahi, A. L. Carter, A. M. Rey, J. J. Bollinger, and A. Shankar, “Bilayer crystals of trapped ions for quantum information processing,” Physical Review X, vol. 14, no. 3. American Physical Society, 2024. ista: Hawaldar S, Shahi P, Carter AL, Rey AM, Bollinger JJ, Shankar A. 2024. Bilayer crystals of trapped ions for quantum information processing. Physical Review X. 14(3), 031030. mla: Hawaldar, Samarth, et al. “Bilayer Crystals of Trapped Ions for Quantum Information Processing.” Physical Review X, vol. 14, no. 3, 031030, American Physical Society, 2024, doi:10.1103/PhysRevX.14.031030. short: S. Hawaldar, P. Shahi, A.L. Carter, A.M. Rey, J.J. Bollinger, A. Shankar, Physical Review X 14 (2024). corr_author: '1' date_created: 2024-09-01T22:01:08Z date_published: 2024-08-16T00:00:00Z date_updated: 2025-09-08T09:07:29Z day: '16' ddc: - '530' department: - _id: JoFi doi: 10.1103/PhysRevX.14.031030 external_id: arxiv: - '2312.10681' isi: - '001293977800002' file: - access_level: open_access checksum: 5d39b7dda67fd7b9a960235f6f38e280 content_type: application/pdf creator: cchlebak date_created: 2024-09-06T09:43:53Z date_updated: 2024-09-06T09:43:53Z file_id: '17757' file_name: 2024_PhysRevX_Hawaldar.pdf file_size: 3909653 relation: main_file success: 1 file_date_updated: 2024-09-06T09:43:53Z has_accepted_license: '1' intvolume: ' 14' isi: 1 issue: '3' language: - iso: eng month: '08' oa: 1 oa_version: Published Version publication: Physical Review X publication_identifier: eissn: - 2160-3308 publication_status: published publisher: American Physical Society quality_controlled: '1' scopus_import: '1' status: public title: Bilayer crystals of trapped ions for quantum information processing tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 14 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '17478' abstract: - lang: eng text: "We study the Fröhlich polaron model in R3, and prove a lower bound on its ground state energy as a function of the total momentum. The bound is asymptotically sharp at large coupling. In combination with a corresponding upper bound proved earlier (Mitrouskas et al. in Forum Math. Sigma 11:1–52, 2023), it shows that the energy is approximately parabolic below the continuum threshold, and that the polaron’s effective mass (defined as the semi-latus rectum of the\r\nparabola) is given by the celebrated Landau–Pekar formula. In particular, it diverges as α4 for large coupling constant α." article_processing_charge: Yes (in subscription journal) article_type: original arxiv: 1 author: - first_name: Morris full_name: Brooks, Morris id: B7ECF9FC-AA38-11E9-AC9A-0930E6697425 last_name: Brooks orcid: 0000-0002-6249-0928 - first_name: Robert full_name: Seiringer, Robert id: 4AFD0470-F248-11E8-B48F-1D18A9856A87 last_name: Seiringer orcid: 0000-0002-6781-0521 citation: ama: 'Brooks M, Seiringer R. The Fröhlich polaron at strong coupling: Part II — Energy-momentum relation and effective mass. Publications Mathematiques de l’Institut des Hautes Etudes Scientifiques. 2024;140:271-309. doi:10.1007/s10240-024-00150-0' apa: 'Brooks, M., & Seiringer, R. (2024). The Fröhlich polaron at strong coupling: Part II — Energy-momentum relation and effective mass. Publications Mathematiques de l’Institut Des Hautes Etudes Scientifiques. Springer Nature. https://doi.org/10.1007/s10240-024-00150-0' chicago: 'Brooks, Morris, and Robert Seiringer. “The Fröhlich Polaron at Strong Coupling: Part II — Energy-Momentum Relation and Effective Mass.” Publications Mathematiques de l’Institut Des Hautes Etudes Scientifiques. Springer Nature, 2024. https://doi.org/10.1007/s10240-024-00150-0.' ieee: 'M. Brooks and R. Seiringer, “The Fröhlich polaron at strong coupling: Part II — Energy-momentum relation and effective mass,” Publications Mathematiques de l’Institut des Hautes Etudes Scientifiques, vol. 140. Springer Nature, pp. 271–309, 2024.' ista: 'Brooks M, Seiringer R. 2024. The Fröhlich polaron at strong coupling: Part II — Energy-momentum relation and effective mass. Publications Mathematiques de l’Institut des Hautes Etudes Scientifiques. 140, 271–309.' mla: 'Brooks, Morris, and Robert Seiringer. “The Fröhlich Polaron at Strong Coupling: Part II — Energy-Momentum Relation and Effective Mass.” Publications Mathematiques de l’Institut Des Hautes Etudes Scientifiques, vol. 140, Springer Nature, 2024, pp. 271–309, doi:10.1007/s10240-024-00150-0.' short: M. Brooks, R. Seiringer, Publications Mathematiques de l’Institut Des Hautes Etudes Scientifiques 140 (2024) 271–309. corr_author: '1' date_created: 2024-09-01T22:01:08Z date_published: 2024-12-01T00:00:00Z date_updated: 2025-09-08T09:08:36Z day: '01' ddc: - '510' department: - _id: RoSe doi: 10.1007/s10240-024-00150-0 external_id: arxiv: - '2211.03353' isi: - '001297785000001' file: - access_level: open_access checksum: af3becc50f7534c9409d3ff8b5c47ed6 content_type: application/pdf creator: dernst date_created: 2025-01-13T08:13:42Z date_updated: 2025-01-13T08:13:42Z file_id: '18824' file_name: 2024_PublicMathIHES_Brooks.pdf file_size: 924342 relation: main_file success: 1 file_date_updated: 2025-01-13T08:13:42Z has_accepted_license: '1' intvolume: ' 140' isi: 1 language: - iso: eng month: '12' oa: 1 oa_version: Published Version page: 271-309 publication: Publications Mathematiques de l'Institut des Hautes Etudes Scientifiques publication_identifier: eissn: - 1618-1913 issn: - 0073-8301 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: 'The Fröhlich polaron at strong coupling: Part II — Energy-momentum relation and effective mass' tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 140 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '17479' abstract: - lang: eng text: Phonon polaritons (PhPs), light coupled to lattice vibrations, in the highly anisotropic polar layered material molybdenum trioxide (α-MoO3) are currently the focus of intense research efforts due to their extreme subwavelength field confinement, directional propagation, and unprecedented low losses. Nevertheless, prior research has primarily concentrated on exploiting the squeezing and steering capabilities of α-MoO3 PhPs, without inquiring much into the dominant microscopic mechanism that determines their long lifetimes, which is key for their implementation in nanophotonic applications. This study delves into the fundamental processes that govern PhP damping in α-MoO3 by combining ab initio calculations with scattering-type scanning near-field optical microscopy (s-SNOM) and Fourier transform infrared (FTIR) spectroscopy measurements across a broad temperature range (8–300 K). The remarkable agreement between our theoretical predictions and experimental observations allows us to identify third-order anharmonic phonon–phonon scattering as the main damping mechanism of α-MoO3 PhPs. These findings shed light on the fundamental limits of low-loss PhPs, which is a crucial factor for assessing their implementation into nanophotonic devices. acknowledgement: 'Funding Sources ─ A.I.F.T.-M. and G.Á.-P. acknowledge support through the Severo Ochoa program from the Government of the Principality of Asturias (references PA-21-PF-BP20-117 and PA20-PF-BP19-053, respectively). A.B.K. and J.T.-G. acknowledge support from the Swiss National Science Foundation (grant # 200020_201096). J.M.-S. acknowledges financial support from the Ramón y Cajal Program of the Government of Spain and FSE (RYC2018-026196-I), the Spanish Ministry of Science and Innovation (State Plan for Scientific and Technical Research and Innovation grant number PID2019-110308GA-I00/AEI/10.13039/501100011033) and project PCI2022-132953 funded by MCIN/AEI/10.13039/501100011033 and the EU “NextGenerationEU”/PRTR”. P.A.-G. acknowledges support from the European Research Council under starting grant no. 715496, 2DNANOPTICA and the Spanish Ministry of Science and Innovation (State Plan for Scientific and Technical Research and Innovation grant number PID2019-111156GB-I00). A.Y.N. acknowledges the Spanish Ministry of Science and Innovation (grant PID2020-115221GB-C42) and the Basque Department of Education (grant PIBA-2023-1-0007). M.V. and J.I.M. acknowledge support by Spanish MCIN/AEI/10.13039/501100011033/FEDER, UE under grant PID2022-136784NB and by Asturias FICYT under grant AYUD/2021/51185 with the support of FEDER funds. I.E. acknowledges funding from the Spanish Ministry of Science and Innovation (Grant No. PID2022-142861NA-I00) and the Department of Education, Universities, and Research of the Eusko Jaurlaritza and the University of the Basque Country UPV/EHU (Grant No. IT1527-22). J. Duan acknowledges the support from the Beijing Natural Science Foundation (Grant No. Z240005), and National Natural Science Foundation of China.' article_processing_charge: No article_type: original arxiv: 1 author: - first_name: Javier full_name: Taboada-Gutiérrez, Javier last_name: Taboada-Gutiérrez - first_name: Yixi full_name: Zhou, Yixi last_name: Zhou - first_name: Ana I.F. full_name: Tresguerres-Mata, Ana I.F. last_name: Tresguerres-Mata - first_name: Christian full_name: Lanza, Christian last_name: Lanza - first_name: Abel full_name: Martínez-Suárez, Abel last_name: Martínez-Suárez - first_name: Gonzalo full_name: Álvarez-Pérez, Gonzalo last_name: Álvarez-Pérez - first_name: Jiahua full_name: Duan, Jiahua last_name: Duan - first_name: José Ignacio full_name: Martín, José Ignacio last_name: Martín - first_name: María full_name: Vélez, María last_name: Vélez - first_name: Ivan full_name: Prieto Gonzalez, Ivan id: 2A307FE2-F248-11E8-B48F-1D18A9856A87 last_name: Prieto Gonzalez orcid: 0000-0002-7370-5357 - first_name: Adrien full_name: Bercher, Adrien last_name: Bercher - first_name: Jérémie full_name: Teyssier, Jérémie last_name: Teyssier - first_name: Ion full_name: Errea, Ion last_name: Errea - first_name: Alexey Y. full_name: Nikitin, Alexey Y. last_name: Nikitin - first_name: Javier full_name: Martín-Sánchez, Javier last_name: Martín-Sánchez - first_name: Alexey B. full_name: Kuzmenko, Alexey B. last_name: Kuzmenko - first_name: Pablo full_name: Alonso-González, Pablo last_name: Alonso-González citation: ama: Taboada-Gutiérrez J, Zhou Y, Tresguerres-Mata AIF, et al. Unveiling the mechanism of phonon-polariton damping in α‑MoO3. ACS Photonics. 2024;11(9):3570-3577. doi:10.1021/acsphotonics.4c00485 apa: Taboada-Gutiérrez, J., Zhou, Y., Tresguerres-Mata, A. I. F., Lanza, C., Martínez-Suárez, A., Álvarez-Pérez, G., … Alonso-González, P. (2024). Unveiling the mechanism of phonon-polariton damping in α‑MoO3. ACS Photonics. American Chemical Society. https://doi.org/10.1021/acsphotonics.4c00485 chicago: Taboada-Gutiérrez, Javier, Yixi Zhou, Ana I.F. Tresguerres-Mata, Christian Lanza, Abel Martínez-Suárez, Gonzalo Álvarez-Pérez, Jiahua Duan, et al. “Unveiling the Mechanism of Phonon-Polariton Damping in Α‑MoO3.” ACS Photonics. American Chemical Society, 2024. https://doi.org/10.1021/acsphotonics.4c00485. ieee: J. Taboada-Gutiérrez et al., “Unveiling the mechanism of phonon-polariton damping in α‑MoO3,” ACS Photonics, vol. 11, no. 9. American Chemical Society, pp. 3570–3577, 2024. ista: Taboada-Gutiérrez J, Zhou Y, Tresguerres-Mata AIF, Lanza C, Martínez-Suárez A, Álvarez-Pérez G, Duan J, Martín JI, Vélez M, Prieto Gonzalez I, Bercher A, Teyssier J, Errea I, Nikitin AY, Martín-Sánchez J, Kuzmenko AB, Alonso-González P. 2024. Unveiling the mechanism of phonon-polariton damping in α‑MoO3. ACS Photonics. 11(9), 3570–3577. mla: Taboada-Gutiérrez, Javier, et al. “Unveiling the Mechanism of Phonon-Polariton Damping in Α‑MoO3.” ACS Photonics, vol. 11, no. 9, American Chemical Society, 2024, pp. 3570–77, doi:10.1021/acsphotonics.4c00485. short: J. Taboada-Gutiérrez, Y. Zhou, A.I.F. Tresguerres-Mata, C. Lanza, A. Martínez-Suárez, G. Álvarez-Pérez, J. Duan, J.I. Martín, M. Vélez, I. Prieto Gonzalez, A. Bercher, J. Teyssier, I. Errea, A.Y. Nikitin, J. Martín-Sánchez, A.B. Kuzmenko, P. Alonso-González, ACS Photonics 11 (2024) 3570–3577. date_created: 2024-09-01T22:01:09Z date_published: 2024-09-01T00:00:00Z date_updated: 2025-09-08T09:05:01Z day: '01' ddc: - '530' department: - _id: NanoFab doi: 10.1021/acsphotonics.4c00485 external_id: arxiv: - '2408.09811' isi: - '001298164600001' pmid: - '39310295' file: - access_level: open_access checksum: bd7e6a138c406e93eaf0a6268fc42bfe content_type: application/pdf creator: dernst date_created: 2025-01-09T14:01:06Z date_updated: 2025-01-09T14:01:06Z file_id: '18819' file_name: 2024_ACSPhotonics_TaboadaGutierrez_.pdf file_size: 2664512 relation: main_file success: 1 file_date_updated: 2025-01-09T14:01:06Z has_accepted_license: '1' intvolume: ' 11' isi: 1 issue: '9' language: - iso: eng month: '09' oa: 1 oa_version: Published Version page: 3570-3577 pmid: 1 publication: ACS Photonics publication_identifier: eissn: - 2330-4022 publication_status: published publisher: American Chemical Society quality_controlled: '1' scopus_import: '1' status: public title: Unveiling the mechanism of phonon-polariton damping in α‑MoO3 tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 11 year: '2024' ...