@article{12984,
  abstract     = {Tattoos are a highly popular medium, with both artistic and medical applications. Although the mechanical process of tattoo application has evolved historically, the results are reliant on the artisanal skill of the artist. This can be especially challenging for some skin tones, or in cases where artists lack experience. We provide the first systematic overview of tattooing as a computational fabrication technique. We built an automated tattooing rig and a recipe for the creation of silicone sheets mimicking realistic skin tones, which allowed us to create an accurate model predicting tattoo appearance. This enables several exciting applications including tattoo previewing, color retargeting, novel ink spectra optimization, color-accurate prosthetics, and more.},
  author       = {Piovarci, Michael and Chapiro, Alexandre and Bickel, Bernd},
  issn         = {1557-7368},
  journal      = {ACM Transactions on Graphics},
  keywords     = {appearance, modeling, reproduction, tattoo, skin color, gamut mapping, ink-optimization, prosthetic},
  location     = {Los Angeles, CA, United States},
  number       = {4},
  publisher    = {Association for Computing Machinery},
  title        = {{Skin-Screen: A computational fabrication framework for color tattoos}},
  doi          = {10.1145/3592432},
  volume       = {42},
  year         = {2023},
}

@article{13033,
  abstract     = {Current methods for assessing cell proliferation in 3D scaffolds rely on changes in metabolic activity or total DNA, however, direct quantification of cell number in 3D scaffolds remains a challenge. To address this issue, we developed an unbiased stereology approach that uses systematic-random sampling and thin focal-plane optical sectioning of the scaffolds followed by estimation of total cell number (StereoCount). This approach was validated against an indirect method for measuring the total DNA (DNA content); and the Bürker counting chamber, the current reference method for quantifying cell number. We assessed the total cell number for cell seeding density (cells per unit volume) across four values and compared the methods in terms of accuracy, ease-of-use and time demands. The accuracy of StereoCount markedly outperformed the DNA content for cases with ~ 10,000 and ~ 125,000 cells/scaffold. For cases with ~ 250,000 and ~ 375,000 cells/scaffold both StereoCount and DNA content showed lower accuracy than the Bürker but did not differ from each other. In terms of ease-of-use, there was a strong advantage for the StereoCount due to output in terms of absolute cell numbers along with the possibility for an overview of cell distribution and future use of automation for high throughput analysis. Taking together, the StereoCount method is an efficient approach for direct cell quantification in 3D collagen scaffolds. Its major benefit is that automated StereoCount could accelerate research using 3D scaffolds focused on drug discovery for a wide variety of human diseases.},
  author       = {Zavadakova, Anna and Vistejnova, Lucie and Belinova, Tereza and Tichanek, Filip and Bilikova, Dagmar and Mouton, Peter R.},
  issn         = {2045-2322},
  journal      = {Scientific Reports},
  keywords     = {Multidisciplinary},
  number       = {1},
  publisher    = {Springer Nature},
  title        = {{Novel stereological method for estimation of cell counts in 3D collagen scaffolds}},
  doi          = {10.1038/s41598-023-35162-z},
  volume       = {13},
  year         = {2023},
}

@article{13041,
  abstract     = {A series of triarylamines was synthesised and screened for their suitability as catholytes in redox flow batteries using cyclic voltammetry (CV). Tris(4-aminophenyl)amine was found to be the strongest candidate. Solubility and initial electrochemical performance were promising; however, polymerisation was observed during electrochemical cycling leading to rapid capacity fade prescribed to a loss of accessible active material and the limitation of ion transport processes within the cell. A mixed electrolyte system of H3PO4 and HCl was found to inhibit polymerisation producing oligomers that consumed less active material reducing rates of degradation in the redox flow battery. Under these conditions Coulombic efficiency improved by over 4 %, the maximum number of cycles more than quadrupled and an additional theoretical capacity of 20 % was accessed. This paper is, to our knowledge, the first example of triarylamines as catholytes in all-aqueous redox flow batteries and emphasises the impact supporting electrolytes can have on electrochemical performance.},
  author       = {Farag, Nadia L. and Jethwa, Rajesh B and Beardmore, Alice E. and Insinna, Teresa and O'Keefe, Christopher A. and Klusener, Peter A.A. and Grey, Clare P. and Wright, Dominic S.},
  issn         = {1864-564X},
  journal      = {ChemSusChem},
  number       = {13},
  publisher    = {Wiley},
  title        = {{Triarylamines as catholytes in aqueous organic redox flow batteries}},
  doi          = {10.1002/cssc.202300128},
  volume       = {16},
  year         = {2023},
}

@article{13042,
  abstract     = {Let Lc,n denote the size of the longest cycle in G(n, c/n),c >1 constant.  We show that there exists a continuous function f(c) such that Lc,n/n→f(c) a.s.  for c>20,  thus  extending  a  result  of  Frieze  and  the  author  to  smaller  values  of c. Thereafter,  for c>20,  we  determine  the  limit  of  the  probability  that G(n, c/n)contains  cycles  of  every  length  between  the  length  of  its  shortest  and  its  longest cycles as n→∞.},
  author       = {Anastos, Michael},
  issn         = {1077-8926},
  journal      = {Electronic Journal of Combinatorics},
  number       = {2},
  publisher    = {Electronic Journal of Combinatorics},
  title        = {{A note on long cycles in sparse random graphs}},
  doi          = {10.37236/11471},
  volume       = {30},
  year         = {2023},
}

@article{13043,
  abstract     = {We derive a weak-strong uniqueness principle for BV solutions to multiphase mean curvature flow of triple line clusters in three dimensions. Our proof is based on the explicit construction
of a gradient flow calibration in the sense of the recent work of Fischer et al. (2020) for any such
cluster. This extends the two-dimensional construction to the three-dimensional case of surfaces
meeting along triple junctions.},
  author       = {Hensel, Sebastian and Laux, Tim},
  issn         = {1463-9971},
  journal      = {Interfaces and Free Boundaries},
  number       = {1},
  pages        = {37--107},
  publisher    = {EMS Press},
  title        = {{Weak-strong uniqueness for the mean curvature flow of double bubbles}},
  doi          = {10.4171/IFB/484},
  volume       = {25},
  year         = {2023},
}

@inproceedings{13048,
  abstract     = {In this paper we introduce a pruning of the medial axis called the (λ,α)-medial axis (axλα). We prove that the (λ,α)-medial axis of a set K is stable in a Gromov-Hausdorff sense under weak assumptions. More formally we prove that if K and K′ are close in the Hausdorff (dH) sense then the (λ,α)-medial axes of K and K′ are close as metric spaces, that is the Gromov-Hausdorff distance (dGH) between the two is 1/4-Hölder in the sense that dGH (axλα(K),axλα(K′)) ≲ dH(K,K′)1/4. The Hausdorff distance between the two medial axes is also bounded, by dH (axλα(K),λα(K′)) ≲ dH(K,K′)1/2. These quantified stability results provide guarantees for practical computations of medial axes from approximations. Moreover, they provide key ingredients for studying the computability of the medial axis in the context of computable analysis.},
  author       = {Lieutier, André and Wintraecken, Mathijs},
  booktitle    = {Proceedings of the 55th Annual ACM Symposium on Theory of Computing},
  isbn         = {9781450399135},
  location     = {Orlando, FL, United States},
  pages        = {1768--1776},
  publisher    = {Association for Computing Machinery},
  title        = {{Hausdorff and Gromov-Hausdorff stable subsets of the medial axis}},
  doi          = {10.1145/3564246.3585113},
  year         = {2023},
}

@inbook{13052,
  abstract     = {Imaging of the immunological synapse (IS) between dendritic cells (DCs) and T cells in suspension is hampered by suboptimal alignment of cell-cell contacts along the vertical imaging plane. This requires optical sectioning that often results in unsatisfactory resolution in time and space. Here, we present a workflow where DCs and T cells are confined between a layer of glass and polydimethylsiloxane (PDMS) that orients the cells along one, horizontal imaging plane, allowing for fast en-face-imaging of the DC-T cell IS.},
  author       = {Leithner, Alexander F and Merrin, Jack and Sixt, Michael K},
  booktitle    = {The Immune Synapse},
  editor       = {Baldari, Cosima and Dustin, Michael},
  isbn         = {9781071631348},
  issn         = {1940-6029},
  pages        = {137--147},
  publisher    = {Springer Nature},
  title        = {{En-Face Imaging of T Cell-Dendritic Cell Immunological Synapses}},
  doi          = {10.1007/978-1-0716-3135-5_9},
  volume       = {2654},
  year         = {2023},
}

@inproceedings{13053,
  abstract     = {Deep neural networks (DNNs) often have to be compressed, via pruning and/or quantization, before they can be deployed in practical settings. In this work we propose a new compression-aware minimizer dubbed CrAM that modifies the optimization step in a principled way, in order to produce models whose local loss behavior is stable under compression operations such as pruning. Thus, dense models trained via CrAM should be compressible post-training, in a single step, without significant accuracy loss. Experimental results on standard benchmarks, such as residual networks for ImageNet classification and BERT models for language modelling, show that CrAM produces dense models that can be more accurate than the standard SGD/Adam-based baselines, but which are stable under weight pruning: specifically, we can prune models in one-shot to 70-80% sparsity with almost no accuracy loss, and to 90% with reasonable (∼1%) accuracy loss, which is competitive with gradual compression methods. Additionally, CrAM can produce sparse models which perform well for transfer learning, and it also works for semi-structured 2:4 pruning patterns supported by GPU hardware. The code for reproducing the results is available at this https URL .},
  author       = {Peste, Elena-Alexandra and Vladu, Adrian and Kurtic, Eldar and Lampert, Christoph and Alistarh, Dan-Adrian},
  booktitle    = {11th International Conference on Learning Representations },
  location     = {Kigali, Rwanda },
  publisher    = {OpenReview},
  title        = {{CrAM: A Compression-Aware Minimizer}},
  year         = {2023},
}

@article{13092,
  abstract     = {There is a need for the development of lead-free thermoelectric materials for medium-/high-temperature applications. Here, we report a thiol-free tin telluride (SnTe) precursor that can be thermally decomposed to produce SnTe crystals with sizes ranging from tens to several hundreds of nanometers. We further engineer SnTe–Cu2SnTe3 nanocomposites with a homogeneous phase distribution by decomposing the liquid SnTe precursor containing a dispersion of Cu1.5Te colloidal nanoparticles. The presence of Cu within the SnTe and the segregated semimetallic Cu2SnTe3 phase effectively improves the electrical conductivity of SnTe while simultaneously reducing the lattice thermal conductivity without compromising the Seebeck coefficient. Overall, power factors up to 3.63 mW m–1 K–2 and thermoelectric figures of merit up to 1.04 are obtained at 823 K, which represent a 167% enhancement compared with pristine SnTe.},
  author       = {Nan, Bingfei and Song, Xuan and Chang, Cheng and Xiao, Ke and Zhang, Yu and Yang, Linlin and Horta, Sharona and Li, Junshan and Lim, Khak Ho and Ibáñez, Maria and Cabot, Andreu},
  issn         = {1944-8252},
  journal      = {ACS Applied Materials and Interfaces},
  number       = {19},
  pages        = {23380–23389},
  publisher    = {American Chemical Society},
  title        = {{Bottom-up synthesis of SnTe-based thermoelectric composites}},
  doi          = {10.1021/acsami.3c00625},
  volume       = {15},
  year         = {2023},
}

@article{13094,
  abstract     = {Endocytosis is a key cellular process involved in the uptake of nutrients, pathogens, or the therapy of diseases. Most studies have focused on spherical objects, whereas biologically relevant shapes can be highly anisotropic. In this letter, we use an experimental model system based on Giant Unilamellar Vesicles (GUVs) and dumbbell-shaped colloidal particles to mimic and investigate the first stage of the passive endocytic process: engulfment of an anisotropic object by the membrane. Our model has specific ligand–receptor interactions realized by mobile receptors on the vesicles and immobile ligands on the particles. Through a series of experiments, theory, and molecular dynamics simulations, we quantify the wrapping process of anisotropic dumbbells by GUVs and identify distinct stages of the wrapping pathway. We find that the strong curvature variation in the neck of the dumbbell as well as membrane tension are crucial in determining both the speed of wrapping and the final states.},
  author       = {Azadbakht, Ali and Meadowcroft, Billie and Varkevisser, Thijs and Šarić, Anđela and Kraft, Daniela J.},
  issn         = {1530-6992},
  journal      = {Nano Letters},
  number       = {10},
  pages        = {4267–4273},
  publisher    = {American Chemical Society},
  title        = {{Wrapping pathways of anisotropic dumbbell particles by Giant Unilamellar Vesicles}},
  doi          = {10.1021/acs.nanolett.3c00375},
  volume       = {23},
  year         = {2023},
}

@article{13095,
  abstract     = {Disulfide bond formation is fundamentally important for protein structure and constitutes a key mechanism by which cells regulate the intracellular oxidation state. Peroxiredoxins (PRDXs) eliminate reactive oxygen species such as hydrogen peroxide through a catalytic cycle of Cys oxidation and reduction. Additionally, upon Cys oxidation PRDXs undergo extensive conformational rearrangements that may underlie their presently structurally poorly defined functions as molecular chaperones. Rearrangements include high molecular-weight oligomerization, the dynamics of which are, however, poorly understood, as is the impact of disulfide bond formation on these properties. Here we show that formation of disulfide bonds along the catalytic cycle induces extensive μs time scale dynamics, as monitored by magic-angle spinning NMR of the 216 kDa-large Tsa1 decameric assembly and solution-NMR of a designed dimeric mutant. We ascribe the conformational dynamics to structural frustration, resulting from conflicts between the disulfide-constrained reduction of mobility and the desire to fulfill other favorable contacts.},
  author       = {Troussicot, Laura and Vallet, Alicia and Molin, Mikael and Burmann, Björn M. and Schanda, Paul},
  issn         = {1520-5126},
  journal      = {Journal of the American Chemical Society},
  number       = {19},
  pages        = {10700–10711},
  publisher    = {American Chemical Society},
  title        = {{Disulfide-bond-induced structural frustration and dynamic disorder in a peroxiredoxin from MAS NMR}},
  doi          = {10.1021/jacs.3c01200},
  volume       = {145},
  year         = {2023},
}

@article{13096,
  abstract     = {Eukaryotic cells can undergo different forms of programmed cell death, many of which culminate in plasma membrane rupture as the defining terminal event1,2,3,4,5,6,7. Plasma membrane rupture was long thought to be driven by osmotic pressure, but it has recently been shown to be in many cases an active process, mediated by the protein ninjurin-18 (NINJ1). Here we resolve the structure of NINJ1 and the mechanism by which it ruptures membranes. Super-resolution microscopy reveals that NINJ1 clusters into structurally diverse assemblies in the membranes of dying cells, in particular large, filamentous assemblies with branched morphology. A cryo-electron microscopy structure of NINJ1 filaments shows a tightly packed fence-like array of transmembrane α-helices. Filament directionality and stability is defined by two amphipathic α-helices that interlink adjacent filament subunits. The NINJ1 filament features a hydrophilic side and a hydrophobic side, and molecular dynamics simulations show that it can stably cap membrane edges. The function of the resulting supramolecular arrangement was validated by site-directed mutagenesis. Our data thus suggest that, during lytic cell death, the extracellular α-helices of NINJ1 insert into the plasma membrane to polymerize NINJ1 monomers into amphipathic filaments that rupture the plasma membrane. The membrane protein NINJ1 is therefore an interactive component of the eukaryotic cell membrane that functions as an in-built breaking point in response to activation of cell death.},
  author       = {Degen, Morris and Santos, José Carlos and Pluhackova, Kristyna and Cebrero, Gonzalo and Ramos, Saray and Jankevicius, Gytis and Hartenian, Ella and Guillerm, Undina and Mari, Stefania A. and Kohl, Bastian and Müller, Daniel J. and Schanda, Paul and Maier, Timm and Perez, Camilo and Sieben, Christian and Broz, Petr and Hiller, Sebastian},
  issn         = {1476-4687},
  journal      = {Nature},
  pages        = {1065--1071},
  publisher    = {Springer Nature},
  title        = {{Structural basis of NINJ1-mediated plasma membrane rupture in cell death}},
  doi          = {10.1038/s41586-023-05991-z},
  volume       = {618},
  year         = {2023},
}

@article{13106,
  abstract     = {Quantum entanglement is a key resource in currently developed quantum technologies. Sharing this fragile property between superconducting microwave circuits and optical or atomic systems would enable new functionalities, but this has been hindered by an energy scale mismatch of >104 and the resulting mutually imposed loss and noise. In this work, we created and verified entanglement between microwave and optical fields in a millikelvin environment. Using an optically pulsed superconducting electro-optical device, we show entanglement between propagating microwave and optical fields in the continuous variable domain. This achievement not only paves the way for entanglement between superconducting circuits and telecom wavelength light, but also has wide-ranging implications for hybrid quantum networks in the context of modularization, scaling, sensing, and cross-platform verification.},
  author       = {Sahu, Rishabh and Qiu, Liu and Hease, William J and Arnold, Georg M and Minoguchi, Y. and Rabl, P. and Fink, Johannes M},
  issn         = {1095-9203},
  journal      = {Science},
  keywords     = {Multidisciplinary},
  number       = {6646},
  pages        = {718--721},
  publisher    = {American Association for the Advancement of Science},
  title        = {{Entangling microwaves with light}},
  doi          = {10.1126/science.adg3812},
  volume       = {380},
  year         = {2023},
}

@phdthesis{13107,
  abstract     = {Within the human body, the brain exhibits the highest rate of energy consumption amongst all organs, with the majority of generated ATP being utilized to sustain neuronal activity. Therefore, the metabolism of the mature cerebral cortex is geared towards preserving metabolic homeostasis whilst generating significant amounts of energy. This requires a precise interplay between diverse metabolic pathways, spanning from a tissue-wide scale to the level of individual neurons. Disturbances to this delicate metabolic equilibrium, such as those resulting from maternal malnutrition
or mutations affecting metabolic enzymes, often result in neuropathological variants of neurodevelopment. For instance, mutations in SLC7A5, a transporter of metabolically essential large neutral amino acids (LNAAs), have been associated with autism and microcephaly. However, despite recent progress in the field, the extent of metabolic restructuring that occurs within the developing brain and the corresponding alterations in nutrient demands during various critical periods remain largely unknown. To investigate this, we performed metabolomic profiling of the murine cerebral cortex to characterize the metabolic state of the forebrain at different developmental stages. We found that the developing cortex undergoes substantial metabolic reprogramming, with specific sets of metabolites displaying stage-specific changes. According to our observations, we determined a distinct temporal period in postnatal development during which the cortex displays heightened reliance on LNAAs. Hence, using a conditional knock-out mouse model, we deleted Slc7a5 in neural cells, allowing us to monitor the impact of a perturbed neuronal metabolic state across multiple developmental stages of corticogenesis. We found that manipulating the levels of essential LNAAs in cortical neurons in vivo affects one particular perinatal developmental period critical for cortical network refinement. Abnormally low intracellular LNAA levels result in cell-autonomous alterations in neuronal lipid metabolism, excitability, and survival during this particular time window. Although most of the effects of Slc7a5 deletion on neuronal physiology are transient, derailment of these processes during this brief but crucial window leads to long-term circuit dysfunction in mice. In conclusion, out data indicate that the cerebral cortex undergoes significant metabolic reorganization during development. This process involves the intricate integration of multiple metabolic pathways to ensure optimal neuronal function throughout different developmental stages. Our findings offer a paradigm for understanding how neurons synchronize the expression of nutrient-related genes with their activity to allow proper brain maturation. Further, our results demonstrate that disruptions in these precisely calibrated metabolic processes during critical periods of brain development may result in neuropathological outcomes in mice and in humans.},
  author       = {Knaus, Lisa},
  issn         = {2663-337X},
  pages        = {147},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{The metabolism of the developing brain : How large neutral amino acids modulate perinatal neuronal excitability and survival}},
  doi          = {10.15479/at:ista:13107},
  year         = {2023},
}

@misc{13116,
  abstract     = {The emergence of large-scale order in self-organized systems relies on local interactions between individual components. During bacterial cell division, FtsZ -- a prokaryotic homologue of the eukaryotic protein tubulin -- polymerizes into treadmilling filaments that further organize into a cytoskeletal ring. In vitro, FtsZ filaments can form dynamic chiral assemblies. However, how the active and passive properties of individual filaments relate to these large-scale self-organized structures remains poorly understood. Here, we connect single filament properties with the mesoscopic scale by combining minimal active matter simulations and biochemical reconstitution experiments. We show that density and flexibility of active chiral filaments define their global order. At intermediate densities, curved, flexible filaments organize into chiral rings and polar bands. An effectively nematic organization dominates for high densities and for straight, mutant filaments with increased rigidity. Our predicted phase diagram captures these features quantitatively, demonstrating how the flexibility, density and chirality of active filaments affect their collective behaviour. Our findings shed light on the fundamental properties of active chiral matter and explain how treadmilling FtsZ filaments organize during bacterial cell division. },
  author       = {Dunajova, Zuzana and Prats Mateu, Batirtze and Radler, Philipp and Lim, Keesiang and Brandis, Dörte and Velicky, Philipp and Danzl, Johann G and Wong, Richard W. and Elgeti, Jens and Hannezo, Edouard B and Loose, Martin},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{Chiral and nematic phases of flexible active filaments}},
  doi          = {10.15479/AT:ISTA:13116},
  year         = {2023},
}

@article{13119,
  abstract     = {A density wave (DW) is a fundamental type of long-range order in quantum matter tied to self-organization into a crystalline structure. The interplay of DW order with superfluidity can lead to complex scenarios that pose a great challenge to theoretical analysis. In the past decades, tunable quantum Fermi gases have served as model systems for exploring the physics of strongly interacting fermions, including most notably magnetic ordering1, pairing and superfluidity2, and the crossover from a Bardeen–Cooper–Schrieffer superfluid to a Bose–Einstein condensate3. Here, we realize a Fermi gas featuring both strong, tunable contact interactions and photon-mediated, spatially structured long-range interactions in a transversely driven high-finesse optical cavity. Above a critical long-range interaction strength, DW order is stabilized in the system, which we identify via its superradiant light-scattering properties. We quantitatively measure the variation of the onset of DW order as the contact interaction is varied across the Bardeen–Cooper–Schrieffer superfluid and Bose–Einstein condensate crossover, in qualitative agreement with a mean-field theory. The atomic DW susceptibility varies over an order of magnitude upon tuning the strength and the sign of the long-range interactions below the self-ordering threshold, demonstrating independent and simultaneous control over the contact and long-range interactions. Therefore, our experimental setup provides a fully tunable and microscopically controllable platform for the experimental study of the interplay of superfluidity and DW order.},
  author       = {Helson, Victor and Zwettler, Timo and Mivehvar, Farokh and Colella, Elvia and Roux, Kevin Etienne Robert and Konishi, Hideki and Ritsch, Helmut and Brantut, Jean Philippe},
  issn         = {1476-4687},
  journal      = {Nature},
  pages        = {716--720},
  publisher    = {Springer Nature},
  title        = {{Density-wave ordering in a unitary Fermi gas with photon-mediated interactions}},
  doi          = {10.1038/s41586-023-06018-3},
  volume       = {618},
  year         = {2023},
}

@misc{13122,
  abstract     = {Data for submitted article "Entangling microwaves with light" at arXiv:2301.03315v1},
  author       = {Sahu, Rishabh},
  publisher    = {Zenodo},
  title        = {{Entangling microwaves with light}},
  doi          = {10.5281/ZENODO.7789417},
  year         = {2023},
}

@misc{13124,
  abstract     = {This dataset comprises all data shown in the figures of the submitted article "Tunable directional photon scattering from a pair of superconducting qubits" at arXiv:2205.03293. Additional raw data are available from the corresponding author on reasonable request.},
  author       = {Redchenko, Elena and Poshakinskiy, Alexander and Sett, Riya and Zemlicka, Martin and Poddubny, Alexander and Fink, Johannes M},
  publisher    = {Zenodo},
  title        = {{Tunable directional photon scattering from a pair of superconducting qubits}},
  doi          = {10.5281/ZENODO.7858567},
  year         = {2023},
}

@misc{13126,
  abstract     = {Mapping the complex and dense arrangement of cells and their connectivity in brain tissue demands nanoscale spatial resolution imaging. Super-resolution optical microscopy excels at visualizing specific molecules and individual cells but fails to provide tissue context. Here, we developed Comprehensive Analysis of Tissues across Scales (CATS), a technology to densely map brain tissue architecture from millimeter regional to nanometer synaptic scales in diverse chemically fixed brain preparations, including rodent and human. CATS uses fixation-compatible extracellular labeling and optical imaging, including stimulated emission depletion or expansion microscopy, to comprehensively delineate cellular structures. It enables three-dimensional reconstruction of single synapses and mapping of synaptic connectivity by identification and analysis of putative synaptic cleft regions. Applying CATS to the mouse hippocampal mossy fiber circuitry, we reconstructed and quantified the synaptic input and output structure of identified neurons. We furthermore demonstrate applicability to clinically derived human tissue samples, including formalin-fixed paraffin-embedded routine diagnostic specimens, for visualizing the cellular architecture of brain tissue in health and disease.},
  author       = {Danzl, Johann G},
  publisher    = {Institute of Science and Technology Austria},
  title        = {{Research data for the publication "Imaging brain tissue architecture across millimeter to nanometer scales"}},
  doi          = {10.15479/AT:ISTA:13126},
  year         = {2023},
}

@article{13127,
  abstract     = {Cooperative disease defense emerges as group-level collective behavior, yet how group members make the underlying individual decisions is poorly understood. Using garden ants and fungal pathogens as an experimental model, we derive the rules governing individual ant grooming choices and show how they produce colony-level hygiene. Time-resolved behavioral analysis, pathogen quantification, and probabilistic modeling reveal that ants increase grooming and preferentially target highly-infectious individuals when perceiving high pathogen load, but transiently suppress grooming after having been groomed by nestmates. Ants thus react to both, the infectivity of others and the social feedback they receive on their own contagiousness. While inferred solely from momentary ant decisions, these behavioral rules quantitatively predict hour-long experimental dynamics, and synergistically combine into efficient colony-wide pathogen removal. Our analyses show that noisy individual decisions based on only local, incomplete, yet dynamically-updated information on pathogen threat and social feedback can lead to potent collective disease defense.},
  author       = {Casillas Perez, Barbara E and Bod'Ová, Katarína and Grasse, Anna V and Tkačik, Gašper and Cremer, Sylvia},
  issn         = {2041-1723},
  journal      = {Nature Communications},
  publisher    = {Springer Nature},
  title        = {{Dynamic pathogen detection and social feedback shape collective hygiene in ants}},
  doi          = {10.1038/s41467-023-38947-y},
  volume       = {14},
  year         = {2023},
}

