@article{21159,
abstract = {One of the foundational theorems of extremal graph theory is Dirac’s theorem, which
says that if an n-vertex graph G has minimum degree at least n/2, then G has a
Hamilton cycle, and therefore a perfect matching (if n is even). Later work by Sárközy,
Selkow and Szemerédi showed that in fact Dirac graphs have many Hamilton cycles
and perfect matchings, culminating in a result of Cuckler and Kahn that gives a precise
description of the numbers of Hamilton cycles and perfect matchings in a Dirac graph
G (in terms of an entropy-like parameter of G). In this paper we extend Cuckler
and Kahn’s result to perfect matchings in hypergraphs. For positive integers d < k,
and for n divisible by k, let md (k, n) be the minimum d-degree that ensures the
existence of a perfect matching in an n-vertex k-uniform hypergraph. In general, it is
an open question to determine (even asymptotically) the values of md (k, n), but we are
nonetheless able to prove an analogue of the Cuckler–Kahn theorem, showing that if
an n-vertex k-uniform hypergraph G has minimum d-degree at least (1+γ )md (k, n)
(for any constantγ > 0), then the number of perfect matchings in G is controlled by
an entropy-like parameter of G. This strengthens cruder estimates arising from work
of Kang–Kelly–Kühn–Osthus–Pfenninger and Pham–Sah–Sawhney–Simkin.},
author = {Kwan, Matthew Alan and Safavi Hemami, Roodabeh and Wang, Yiting},
issn = {1439-6912},
journal = {Combinatorica},
publisher = {Springer Nature},
title = {{Counting perfect matchings in Dirac hypergraphs}},
doi = {10.1007/s00493-025-00194-8},
volume = {46},
year = {2026},
}
@article{21160,
abstract = {Context. AM Canum Venaticorum (AM CVn) stars are ultra-compact binary systems composed of a white dwarf primary accreting from a hydrogen-deficient donor. They play a crucial role in astrophysics as potential progenitors of Type Ia supernovae and as laboratories for gravitational wave studies. However, their formation and evolutionary history remain incomplete. Three formation channels have been discussed in the literature: the white dwarf, He-star, and cataclysmic variable channels.
Aims. The chemical composition of the accretor atmosphere reflects the material transferred from the donor. In this work we took the first accurate measurements of the fundamental parameters of the accreting white dwarf in ZTF J225237.05−051917.4, including the abundances of key elements such as carbon, nitrogen, and silicon, by analysing ultraviolet spectra obtained with the Hubble Space Telescope (HST). These measurements provide new insight into the evolutionary history of the system and, together with existing optical observations, establish it as a benchmark to develop our pipeline, paving the way for its application to a larger sample of AM CVn systems.
Methods. We determined the binary parameters through photometric analysis and constrained the atmospheric parameters of the white dwarf accretor, including its effective temperature, surface gravity, and chemical abundances, by fitting the HST ultraviolet spectrum with synthetic spectral models. We then inferred the system’s formation channel by comparing the results with theoretical evolutionary models.
Results. According to our measurements, the accretor’s effective temperature (Teff) is 23 300 ± 600 K and the surface gravity (log g) is 8.4 ± 0.3, which imply an accretor mass (MWD) of 0.86 ± 0.16 M⊙. We find a high nitrogen-to-carbon abundance ratio by mass of > 153.
Conclusions. The accretor is significantly hotter than previous estimates based on simplified blackbody fits to the spectral energy distribution, underscoring the importance of detailed spectral modelling for accurately determining system parameters. Our results show that ultraviolet spectroscopy is well suited to constraining the formation channels of AM CVn systems. Of the three proposed formation channels, the He-star channel can be excluded given the high nitrogen-to-carbon ratio. Our results are consistent with both the white dwarf and cataclysmic variable channels.},
author = {Yu, W. and Pala, A. F. and Kupfer, T. and Gänsicke, B. T. and Koester, D. and Belloni, D. and Wong, T. L.S. and Schreiber, M. R. and van Roestel, Joannes C and Brown, A. J. and Waagen, E. O. and González-Carballo, J. L. and Bednarz, S. and Bernacki, K. and De Martino, D. and Fernández Mañanes, E. and González Farfán, R. and Green, M. J. and Groot, P. J. and Hambsch, F. J. and Knigge, C. and Martin-Velasco, J. L. and Morales-Aimar, M. and Myers, G. and Naves Nogues, R. and Poggiani, R. and Popowicz, A. and Ramsay, G. and Reina-Lorenz, E. and Rodríguez-Gil, P. and Salto-González, J. L. and Sion, E. M. and Steeghs, D. and Szkody, P. and Toloza, O. and Tovmassian, G.},
issn = {1432-0746},
journal = {Astronomy and Astrophysics},
publisher = {EDP Sciences},
title = {{The evolutionary history of ultra-compact accreting binaries: I. Chemical abundances and the formation channel of the eclipsing AM CVn system ZTF J225237.05-051917.4 from HST spectroscopy}},
doi = {10.1051/0004-6361/202557568},
volume = {706},
year = {2026},
}
@article{21161,
abstract = {In many species, sex-biased expression is widespread and thought to contribute to sexual dimorphism. While bulk RNA-sequencing has been instrumental in identifying strongly sex-biased genes, it lacks resolution to assess variation across cell-types and tissue compartments. Using single-nucleus expression data from the Fly Cell Atlas, we investigate sex differences in adult Drosophila melanogaster. We find that differences in cell-type composition between the sexes are not a major source of sex-bias, as for the vast majority of genes, the degree of sex-bias is similar regardless of whether sex differences in cell-type composition are controlled for or not. Our analysis confirms a deficit of X-linked male-biased genes in the body’s somatic tissues that is widespread across cell-types. We also find the excess of X-linked female-biased genes to be associated with nervous system cells in the head but with epithelial cells in the body’s somatic tissues, showing that single-nucleus data crucially resolves sex-bias at the cell-type level. We investigate dosage compensation (DC) across 15 tissues and 17 cell-types. We observe that it varies throughout the body. Surprisingly, we observe a lack of DC in a cluster of main cells within the male accessory glands. This result highlights the importance of understanding context-dependent DC.},
author = {De Castro Barbosa Rodrigues Barata, Carolina and Vicoso, Beatriz},
issn = {1471-2954},
journal = {Proceedings of the Royal Society B Biological Sciences},
number = {2063},
publisher = {Royal Society of London},
title = {{Single-nucleus resolution of sex-biased expression and dosage compensation in Drosophila melanogaster}},
doi = {10.1098/rspb.2025.2471},
volume = {293},
year = {2026},
}
@article{21164,
abstract = {Global emission inventories often fail to capture the complexities of vehicular pollution in regions with unique fuel mixes, such as Brazil’s extensive biofuel use, leading to significant uncertainties in atmospheric modeling. This study presents a century-long (1960–2100) bottom-up vehicular emission inventory for Brazil, leveraging locally derived emission factors. Our estimates reveal substantial discrepancies in magnitude, timing, and speciation of non-CO2 pollutants (CO, NMHC, PM2.5) compared to leading global inventories (EDGAR, CEDS, CAMS), highlighting critical inaccuracies in widely used data sets. More critically, future projections under Shared Socioeconomic Pathways (SSPs) uncover a novel positive feedback mechanism: rising temperatures significantly enhance vehicular evaporative nonmethane hydrocarbon (NMHC) emissions. This temperature-dependent increase and subsequent NMHC oxidation to CO2 suggest an overlooked pathway that could amplify climate warming and air pollution globally, particularly after a breakpoint around 2050 (p < 0.05). While historical emissions peaked in the 1990s–2000s, nonexhaust PM becomes increasingly important. Air quality simulations using our inventory in the MUSICA model show good regional PM2.5 agreement but highlight challenges in resolving local primary pollutant peaks. This comprehensive inventory provides crucial data for Brazil and uncovers globally relevant climate–chemistry interactions, urging a re-evaluation of regional specificities in global emission assessments.},
author = {Ibarra-Espinosa, Sergio and Dias de Freitas, Edmilson and Gaubert, Benjamin and Lichtig, Pablo and Ropkins, Karl and da Silva, Iara and Martins Pereira, Guilherme and Schuch, Daniel and Nascimento, Janaina and Hoinaski, Leonardo and Martins, Leila Droprinchinski and Gavidia-Calderón, Mario and Vara-Vela, Angel and Toledo de Almeida Albuquerque, Taciana and Ynoue, Rita Yuri and Diez, Sebastian and Mera, Zamir and Casallas Garcia, Alejandro and Vallejo, Fidel and Diaz, Valeria and Pedruzzi, Rizzieri and Abrutzky, Rosana and Franco, Marco A. and Huneeus, Nicolas and Jorquera, Hector and Belalcázar-Cerón, Luis Carlos and Rojas, Néstor Y. and de Fatima Andrade, Maria and Emmons, Louisa and Brasseur, Guy},
issn = {1520-5851},
journal = {Environmental Science & Technology},
publisher = {American Chemical Society},
title = {{A century of vehicular emissions in Brazil: Unveiling the impacts of unique fuel mix on air quality}},
doi = {10.1021/acs.est.5c08400},
year = {2026},
}
@misc{21174,
abstract = {UTe2 exhibits the remarkable phenomenon of re-entrant superconductivity, whereby the zero-resistance state reappears above 40 tesla after being suppressed with a field of around 10 tesla. One potential pairing mechanism, invoked in the related re-entrant superconductors UCoGe and URhGe, involves transverse fluctuations of a ferromagnetic order parameter. However, the requisite ferromagnetic order - present in both UCoGe and URhGe - is absent in UTe2, and magnetization measurements show no sign of strong fluctuations. Here, we measure the magnetotropic susceptibility of UTe2 across two field-angle planes. This quantity is sensitive to the magnetic susceptibility in a direction transverse to the applied magnetic field - a quantity that is not accessed in conventional magnetization measurements. We observe a very large decrease in the magnetotropic susceptibility over a broad range of field orientations, indicating a large increase in the transverse magnetic susceptibility. The three superconducting phases of UTe2, including the high-field re-entrant phase, surround this region of enhanced susceptibility in the field-angle phase diagram. The strongest transverse susceptibility is found near the critical end point of the high-field metamagnetic transition, suggesting that quantum critical fluctuations of a field-induced magnetic order parameter may be responsible for the large transverse susceptibility, and may provide a pairing mechanism for field-induced superconductivity in UTe2.},
author = {Modic, Kimberly A},
keywords = {transverse magnetic susceptibility, magnetotropic, superconductivity, magnetic fluctuations},
publisher = {Institute of Science and Technology Austria},
title = {{Research data for "Giant transverse magnetic fluctuations at the edge of re-entrant superconductivity in UTe2"}},
doi = {10.15479/AT-ISTA-21174},
year = {2026},
}
@unpublished{21212,
abstract = {Malignant glioma is incurable. Using a mouse genetic mosaic system to generate sporadic Trp53,Nf1-null OPCs, we previously identified oligodendrocyte precursor cell (OPC) as a cell-of-origin of glioma. Here, we report that pre-malignant Trp53,Nf1-null OPCs outcompete wildtype counterparts during their expansion. Blocking competition by mutating/strengthening wildtype OPCs impeded both pre-malignant progression and malignant expansion of glioma.
“In-tissue” phosphoproteomic profiling revealed an enrichment of phosphopeptides related to RNA splicing and protein translation at the peak of cell competition, suggesting that competitiveness may stem from unique protein species. Among candidates was mTORC1, whose pharmacological inhibition or genetic disruption resulted in a loss of competitiveness in our mouse model. Finally, analysis of patient biopsies and interrogating the role of individual gliomagenic mutations in OPC competition supported its relevance in human gliomas. Together, these findings identified the driving role of competitive interactions among OPCs in gliomagenesis, and suggest unconventional therapeutic strategies to target this process.},
author = {Jiang, Ying and Ahn, Ryuhjin and Huang, Arthur and Gonzalez, Phillippe P. and Kim, Jungeun and Zhang, Guoxin and Liu, Zihao and He, Zhenqiang and Dudley, Lindsey and Patel, Kunal S. and Dzhivhuho, Godfrey A. and Crowl, Sam and Przanowski, Piotr and Camacho, Luisa Quesada and Hao, Sijie and Zeng, Jianhao and Hippenmeyer, Simon and Fallahi-Sichani, Mohammad and Janes, Kevin A. and Naegle, Kristen M. and Hammarskjold, Marie-Louise and Goldman, Steven A. and Kornblum, Harley I. and Yao, Maojin and White, Forest and Zong, Hui},
booktitle = {bioRxiv},
title = {{Critical role of cell competition in gliomagenesis}},
doi = {10.64898/2026.01.15.699808},
year = {2026},
}
@article{21217,
abstract = {This study investigates the mechanisms driving clustered convection and the breakdown of the Intertropical Convergence Zone (ITCZ) over the Western Pacific Warm Pool using high‐resolution cloud‐resolving simulations and machine‐learning sensitivity experiments. Results show that ITCZ breakdown episodes, marked by spatially homogeneous convection and weakened meridional moisture gradients, are triggered primarily by anomalous moisture advection linked to the equatorial Rossby‐wave activity. While large‐scale moisture advection regulates the background convective state strongly, it is the surface and low‐level meridional winds that dominate transitions between clustered and random convection. Simulations demonstrate that moisture alone can sustain convective clustering, but breakdown episodes are more persistent and widespread when coupled with southerly meridional advection. These findings confirm that wave‐driven advection acts as a regulatory mechanism, periodically disrupting convective clustering and reshaping the meridional moisture gradient. This modulation of organization by wave‐induced breakdown events is critical for understanding tropical convection variability and its implications for the climate system.},
author = {Casallas Garcia, Alejandro and Mark Tompkins, Adrian and Muller, Caroline J},
issn = {1477-870X},
journal = {Quarterly Journal of the Royal Meteorological Society},
publisher = {Wiley},
title = {{Moisture and wind effects of Rossby waves on Western Pacific Intertropical Convergence Zone breakdown events}},
doi = {10.1002/qj.70131},
year = {2026},
}
@inbook{21230,
abstract = {Asteroseismology is the study of the interior physics and structure of stars using their pulsations. It is applicable to stars across the Hertzsprung–Russell (HR) diagram and a powerful technique not only to measure masses, radii, and ages but also directly constrain interior rotation, chemical mixing, and magnetism. This is because a star's self-excited pulsation modes are sensitive to its structure. Asteroseismology generally requires long-duration and high-precision time-series data. The method of forward asteroseismic modeling, which is the statistical comparison of observed pulsation mode frequencies to theoretically predicted pulsation frequencies calculated from a grid of models, provides precise constraints for calibrating various transport phenomena. In this introduction to asteroseismology, we provide an overview of its principles, and the typical data sets and methodologies used to constrain stellar interiors. Finally, we present key highlights of asteroseismic results from across the HR diagram, and conclude with ongoing challenges and future prospects for this ever-expanding field within stellar astrophysics.},
author = {Bowman, Dominic M. and Bugnet, Lisa Annabelle},
booktitle = {Encyclopedia of Astrophysics},
editor = {Mandel, Ilya},
isbn = {9780443214400},
pages = {133--153},
publisher = {Elsevier},
title = {{Asteroseismology}},
doi = {10.1016/b978-0-443-21439-4.00036-5},
volume = {2},
year = {2026},
}
@article{21231,
abstract = {To assess cell migration in complex spatial environments, microfabricated chips, such as mazes and pillar forests, are routinely used to impose spatial and mechanical constraints, and cell trajectories are followed within these structures by advanced imaging techniques. In systems mechanobiology, computational models serve as essential tools to uncover how physical geometry influences intracellular dynamics; however, decoding such complex behaviors requires advanced inference techniques. Here, we integrated experimental observations of dendritic cell migration in a geometrically constrained microenvironment into a Cellular Potts model. We demonstrated that these spatial constraints modulate the motility dynamics, including speed and directional changes. We show that classical summary statistics, such as mean squared displacement and turning angle distributions, can resolve key mechanistic features but fail to extract richer spatiotemporal patterns, limiting accurate parameter inference. To solve this, we applied neural posterior estimation with in-the-loop learning of summary features. This learned summary representation of the data enables robust and flexible parameter inference, providing a data-driven framework for model calibration and advancing quantitative analysis of cell migration in structured microenvironments.},
author = {Arruda, Jonas and Alamoudi, Emad and Mueller, Robert and Vaisband, Marc and Molkenbur, Ronja and Merrin, Jack and Kiermaier, Eva and Hasenauer, Jan},
issn = {2056-7189},
journal = {npj Systems Biology and Applications},
publisher = {Springer Nature},
title = {{Simulation-based inference of cell migration dynamics in complex spatial environments}},
doi = {10.1038/s41540-026-00648-9},
volume = {12},
year = {2026},
}
@article{21232,
abstract = {Abstract
In this paper, we consider a simple class of stratified spaces – 2-complexes. We present an algorithm that learns the abstract structure of an embedded 2-complex from a point cloud sampled from it. We use tools and inspiration from computational geometry, algebraic topology, and topological data analysis and prove the correctness of the identified abstract structure under assumptions on the embedding.},
author = {Bleile, Yossi},
issn = {2730-9657},
journal = {La Matematica},
publisher = {Springer Nature},
title = {{Towards stratified space learning: 2-complexes}},
doi = {10.1007/s44007-025-00183-9},
volume = {5},
year = {2026},
}
@article{21233,
abstract = {Potential self-perpetuating dieback of the Amazon rain forest has been a topic of concern. The concern is that initial deforestation could critically impair the forest’s water recycling capacities, further harming the remaining forest through reduced annual precipitation. Many studies have focused on annual mean precipitation changes, due to its widespread perception as a central control on the Amazon rain forest’s stability. However, the impact of deforestation goes beyond changes in the annual mean precipitation. Yet, global coarse-resolution climate models are not well suited to investigate changes in short-duration and localized events due to their coarse resolution. Here, we circumvent these issues by analyzing a full-deforestation scenario simulated by a global storm-resolving model. We focus on changes in the tail of the hourly distribution of precipitation, temperature, and wind. Hourly precipitation becomes more extreme in the absence of the forest than in an intact forest, with an increased occurrence of both no rain and intense rainfall. These changes are driven by enhanced moisture convergence that strengthens vertical velocity. On average, the near-surface temperature rises significantly by about 3.84 °C, and the daily minimum temperature after deforestation becomes similar to the daily maximum temperature before deforestation. Except for wet-bulb temperature, human heat stress indicators shift to more severe levels, with implications for health and a significant reduction in work productivity. Finally, the mean 10 m wind speed intensifies by a factor of four, with the 99th percentile wind speed doubling. To summarize, our findings, while based on an idealized case, provide a stark warning of the effects of continuing deforestation of the Amazon.},
author = {Yoon, Arim and Hohenegger, Cathy and Bao, Jiawei and Brunner, Lukas},
issn = {2190-4987},
journal = {Earth System Dynamics},
number = {1},
pages = {167--179},
publisher = {Copernicus GmbH},
title = {{Extreme events in the Amazon after deforestation}},
doi = {10.5194/esd-17-167-2026},
volume = {17},
year = {2026},
}
@article{21234,
abstract = {In aged humans and mice, hypobranched glycogen aggregates, known as polyglucosan bodies (PGBs), accumulate in hippocampal astrocytes. While PGBs are linked to cognitive decline in neurological diseases, they remain largely unstudied in the context of typical aging. We show that PGBs arise in autophagy-dysregulated astrocytes in the aged hippocampus, with substantial variation among 32 inbred BXD mouse strains. Genetic mapping through quantitative trait locus analysis identified a major locus (Pgb1) that modulates hippocampal PGB burden. Extensive transcriptomic and proteomic datasets were produced for the aged hippocampus of the BXD family to investigate the mechanism by which the Pgb1 locus modulates PGB burden. We identified that Pgb1 contains allelic Smarcal1 and Usp37 variants and influences PGB burden through trans-regulation of mRNA and protein expression levels, including abundance of glycogen-mobilizing factor PYGB. Furthermore, comprehensive phenome-wide association scans, transcriptomic analyses, and direct behavioral testing demonstrated that cognition remains intact despite age-related PGB burden. A record of this paper’s transparent peer review process is included in the supplemental information.},
author = {Gómez-Pascual, Alicia and Glikman, Dow M and Ng, Hui Xin and Tomkins, James E. and Lu, Lu and Xu, Ying and Ashbrook, David G. and Kaczorowski, Catherine and Kempermann, Gerd and Killmar, John and Mozhui, Khyobeni and Ohlenschläger, Oliver and Aebersold, Rudolf and Ingram, Donald K. and Williams, Evan G. and Jucker, Mathias and Overall, Rupert W. and Williams, Robert W. and de Bakker, Dennis E.M.},
issn = {2405-4712},
journal = {Cell Systems},
number = {2},
publisher = {Elsevier},
title = {{The Smarcal1-Usp37 locus modulates glycogen aggregation in astrocytes of the aged hippocampus}},
doi = {10.1016/j.cels.2025.101488},
volume = {17},
year = {2026},
}
@article{21242,
abstract = {We obtain an asymptotic formula for the number of integral solutions to a system of diagonal equations. We obtain an asymptotic formula for the number of solutions with variables restricted to smooth numbers as well. We improve the required number of variables compared to previous results by incorporating recent progress on Waring’s problem and the resolution of the main conjecture in Vinogradov’s mean value theorem.},
author = {Rome, Nick and Yamagishi, Shuntaro},
issn = {1945-5844},
journal = {Pacific Journal of Mathematics},
number = {1},
pages = {179--198},
publisher = {Mathematical Sciences Publishers},
title = {{Integral solutions to systems of diagonal equations}},
doi = {10.2140/pjm.2026.340.179},
volume = {340},
year = {2026},
}
@article{21273,
abstract = {In this paper we examine how porosity fluctuations affect the hydrodynamic permeability of a porous matrix or membrane. We introduce a fluctuating Darcy model, which couples the Navier-Stokes equation to the space- and time-dependent porosity fluctuations via a Darcy friction term. Using a perturbative approach, a Dyson equation for hydrodynamic fluctuations is derived and solved to express the permeability in terms of the matrix fluctuation spectrum. Surprisingly, the model reveals strong modifications of the fluid permeability in fluctuating matrices compared to static ones. Applications to various matrix excitation models, the breathing matrix, phonons, and active forcing, highlight the significant influence of matrix fluctuations on fluid transport, offering insights for optimizing membrane design for separation applications.},
author = {Dombret, Albert and Sutter, Adrien and Coquinot, Baptiste and Kavokine, Nikita and Coasne, Benoit and Bocquet, Lydéric},
issn = {2469-990X},
journal = {Physical Review Fluids},
number = {1},
publisher = {American Physical Society},
title = {{Hydrodynamic permeability of fluctuating porous membranes}},
doi = {10.1103/m8h6-1wfk},
volume = {11},
year = {2026},
}
@article{21274,
abstract = {Many white dwarfs are observed in compact double white dwarf binaries, and through the emission of gravitational waves, a large fraction are destined to merge. The merger remnants that do not explode in a Type Ia supernova are expected to initially be rapidly rotating and highly magnetized. In this work, we present our discovery of the variable white dwarf ZTF J200832.79+444939.67, hereafter ZTF J2008+4449, as a likely merger remnant showing signs of circumstellar material without a stellar or substellar companion. The nature of ZTF J2008+4449 as a merger remnant is supported by its physical properties: it is hot (35 500 ± 300 K) and massive (1.12 ± 0.03 M
⊙
), rapidly rotating with a period of ≈6.6 minutes, and likely possesses exceptionally strong magnetic fields (∼400−600 MG) at its surface. Remarkably, we detect a significant period derivative of (1.80 ± 0.09)×10
−12
s/s, indicating that the white dwarf is spinning down, and a soft X-ray emission that is inconsistent with photospheric emission. As the presence of a mass-transferring stellar or brown dwarf companion is excluded by infrared photometry, the detected spin-down and X-ray emission could be tell-tale signs of a magnetically driven wind or of interaction with circumstellar material, possibly originating from the fallback of gravitationally bound merger ejecta or from the tidal disruption of a planetary object. We also detect Balmer emission, which requires the presence of ionized hydrogen in the vicinity of the white dwarf, showing Doppler shifts as high as ≈2000 km s
−1
. The unusual variability of the Balmer emission on the spin period of the white dwarf is consistent with the trapping of a half ring of ionized gas in the magnetosphere of the white dwarf.
},
author = {Cristea, Andrei-Alexandru and Caiazzo, Ilaria and Cunningham, Tim and Raymond, John C. and Vennes, Stephane and Kawka, Adela and Desai, Aayush A and Miller, David R. and Hermes, J. J. and Fuller, Jim and Heyl, Jeremy and van Roestel, Jan and Burdge, Kevin B. and Rodriguez, Antonio C. and Pelisoli, Ingrid and Gänsicke, Boris T. and Szkody, Paula and Kenyon, Scott J. and Vanderbosch, Zach and Drake, Andrew and Ferrario, Lilia and Wickramasinghe, Dayal and Karambelkar, Viraj R. and Justham, Stephen and Pakmor, Ruediger and El-Badry, Kareem and Prince, Thomas and Kulkarni, S. R. and Graham, Matthew J. and Masci, Frank J. and Groom, Steven L. and Purdum, Josiah and Dekany, Richard and Bellm, Eric C.},
issn = {1432-0746},
journal = {Astronomy & Astrophysics},
publisher = {EDP Sciences},
title = {{A half ring of ionized circumstellar material trapped in the magnetosphere of a white dwarf merger remnant}},
doi = {10.1051/0004-6361/202556432},
volume = {706},
year = {2026},
}
@article{21275,
abstract = {DNA methylation is a primary layer of epigenetic modification that plays a pivotal role in the regulation of development, aging, and cancer. The concurrent activity of opposing enzymes that mediate DNA methylation and demethylation gives rise to a biochemical cycle and active turnover of DNA methylation. While the ensuing biochemical oscillations have been implicated in the regulation of cell differentiation, their functional role and spatiotemporal dynamics are unknown. In this work, we demonstrate that chromatin-mediated coupling between these local biochemical cycles can lead to the emergence of phase-locked domains, regions of locally synchronized turnover activity, whose coarsening is arrested by genomic heterogeneity. We introduce a minimal model based on stochastic oscillators with constrained long-range and nonreciprocal interactions, shaped by the local chromatin organization. Through a combination of analytical theory and stochastic simulations, we predict both the degree of synchronization and the typical size of emergent phase-locked domains. We qualitatively test these predictions using single-cell sequencing data. Our results show that DNA methylation turnover exhibits surprisingly rich spatiotemporal patterns that may be used by cells to control cell differentiation.},
author = {Olmeda, Fabrizio and Gupta, Misha and Bektas, Onurcan and Rulands, Steffen},
issn = {2835-8279},
journal = {PRX Life},
publisher = {American Physical Society},
title = {{Spatiotemporal patterns of active epigenetic turnover}},
doi = {10.1103/89bj-79g5},
volume = {4},
year = {2026},
}
@article{21282,
abstract = {Developmental patterning comprises processes that range from purely instructed, where external signals specify cell fates, to fully self-organized, where spatial patterns emerge autonomously through cellular interactions. We propose that both extremes—as well as the continuum of intermediate cases—can be conceptualized as information-processing systems, whose operation can be described using “Marr's three levels of analysis”: the computational problem being solved, the algorithms employed, and their molecular implementation. At the first level, we argue that normative theories, such as information-theoretic optimization principles, provide a formalization of the computational problem. At the second level, we show how simplified information-processing architectures provide a framework for developmental algorithms, which are formalized mathematically using dynamical systems theory. At the third level, the implementation of developmental algorithms is described by mechanistic biophysical and gene regulatory network models.},
author = {Brückner, David and Tkačik, Gašper},
issn = {2835-8279},
journal = {PRX Life},
publisher = {American Physical Society},
title = {{Marr's three levels for embryonic development: Information, dynamical systems, gene networks}},
doi = {10.1103/fdcf-dkws},
volume = {4},
year = {2026},
}
@misc{21284,
abstract = {The advantageous characteristics attributed to the 19F nucleus have made it a popular target for NMR once again in recent years. Aside from solution NMR, an increasing number of studies have been conducted applying solid-state magic-angle-spinning NMR to fluorine-labeled samples. Here, the high chemical shift anisotropy and strong dipolar couplings can be utilized to get structural insights into proteins and measure long distances. Despite increasing popularity and promising benefits, the sensitivity of biomolecular 19F MAS NMR often suffers from slow longitudinal T1 relaxation and therefore long recycle delays. In this work, we expand paramagnetic doping, an approach commonly used to reduce proton T1 relaxation times, to 19F-labeled biological samples. We study the effect of Gd(DTPA) and Gd(DTPA-BMA) on 19F and 13C T1 and T2 relaxation in a [5-19F13C]-tryptophan-labeled protein via 19F-detected MAS NMR experiments. The observed paramagnetic relaxation enhancement substantially reduces measurement times of 19F MAS NMR experiments without compromising resolution. Additionally, we report the chemical-shift assignments of all four fluorotryptophan signals in the 12 × 39 kDa large protein using a mutagenesis approach.},
author = {Becker, Lea Marie and Schanda, Paul},
publisher = {Institute of Science and Technology Austria},
title = {{Research data for "Accelerated 19F biomolecular magic-angle spinning NMR with paramagnetic dopants"}},
doi = {10.15479/AT-ISTA-21284},
year = {2026},
}
@unpublished{21290,
abstract = {Gene duplication underlies evolutionary innovation, yet many paralogues remain highly similar, raising questions about their functional divergence and physiological relevance. The spliceosomal Sm core protein SNRPB and its mammalian-specific paralogue SNRPN share over 90% sequence identity, but their distinct expression patterns - SNRPB being ubiquitous and SNRPN confined to the brain - suggest specialized functions. Why mammals have two different spliceosomes has remained obscure. Here, we generated isogenic human cell lines expressing ectopically either SNRPB or SNRPN exclusively and found that SNRPN stabilizes transcripts involved in energy metabolism and mitochondrial function, leading to increased mitochondrial abundance and oxygen consumption. Despite similar spliceosomal interactomes, SNRPN more strongly associates with the PRMT5 methylosome complex and exhibits dynamic arginine methylation in its C-terminal region that is sensitive to translation inhibition and amino acid availability. The SNRPN-dependent transcriptome responds to translation inhibition by stabilizing long, intron-rich genes involved in amino acid and energy metabolism. Our findings reveal a nutrient-sensitive, methylation-dependent mechanism that differentiates the two paralogues. This suggests that SNRPN functions as a metabolic-specialized spliceosomal subunit thereby providing tissue-specific adaptation of RNA processing in mammals.},
author = {Polat Haas, Feyza and Villalba Requena, Ana and Rusina, Polina and Gopalan, Anusha and Fritz, Hector and Akhmetkaliyev, Azamat and Ruehle, Frank and Einsiedel, Anna and Szczepinska, Anna and Kielisch, Fridolin and Chen, Jia-Xuan and Nguyen, Susanne and Schmidlin, Thierry and Hippenmeyer, Simon and Bailicata, M. Felicia and Keller Valsecchi, Claudia Isabelle},
booktitle = {bioRxiv},
title = {{The splicing paralogues SNRPB and SNRPN control differential metabolic states.}},
doi = {10.64898/2026.02.11.705284},
year = {2026},
}
@article{21295,
abstract = {Depending on the type of flow, the transition to turbulence can take one of two forms: either turbulence arises from a sequence of instabilities or from the spatial proliferation of transiently chaotic domains, a process analogous to directed percolation. The former scenario is commonly referred to as a supercritical transition and frequently encountered in flows destabilized by body forces, whereas the latter subcritical transition is common in shear flows. Both cases are inherently continuous in a sense that the transformation from ordered laminar to fully turbulent fluid motion is only accomplished gradually with flow speed. Here we show that these established transition types do not account for the more general setting of shear flows subject to body forces. The combination of the two continuous scenarios leads to the attenuation of spatial coupling; with increasing forcing amplitude, the transition becomes increasingly sharp and eventually discontinuous. We argue that the suppression of laminar–turbulent coexistence and the approach towards a discontinuous phase transition potentially apply to a broad range of situations including flows subject to, for example, buoyancy, centrifugal or electromagnetic forces.},
author = {Yang, Bowen and Zhuang, Yi and Yalniz, Gökhan and Vasudevan, Mukund and Marensi, Elena and Hof, Björn},
issn = {1745-2481},
journal = {Nature Physics},
publisher = {Springer Nature},
title = {{Discontinuous transition to shear flow turbulence}},
doi = {10.1038/s41567-025-03166-3},
year = {2026},
}