[{"date_published":"2025-10-10T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","oa":1,"DOAJ_listed":"1","citation":{"ieee":"S. Naoz, Z. Haiman, E. Quataert, and L. Holzknecht, “Triples as links between binary Black Hole mergers, their electromagnetic counterparts, and galactic Black Holes,” <i>The Astrophysical Journal Letters</i>, vol. 992, no. 1. IOP Publishing, 2025.","chicago":"Naoz, Smadar, Zoltán Haiman, Eliot Quataert, and Liz Holzknecht. “Triples as Links between Binary Black Hole Mergers, Their Electromagnetic Counterparts, and Galactic Black Holes.” <i>The Astrophysical Journal Letters</i>. IOP Publishing, 2025. <a href=\"https://doi.org/10.3847/2041-8213/ae0a20\">https://doi.org/10.3847/2041-8213/ae0a20</a>.","ista":"Naoz S, Haiman Z, Quataert E, Holzknecht L. 2025. Triples as links between binary Black Hole mergers, their electromagnetic counterparts, and galactic Black Holes. The Astrophysical Journal Letters. 992(1), L12.","mla":"Naoz, Smadar, et al. “Triples as Links between Binary Black Hole Mergers, Their Electromagnetic Counterparts, and Galactic Black Holes.” <i>The Astrophysical Journal Letters</i>, vol. 992, no. 1, L12, IOP Publishing, 2025, doi:<a href=\"https://doi.org/10.3847/2041-8213/ae0a20\">10.3847/2041-8213/ae0a20</a>.","apa":"Naoz, S., Haiman, Z., Quataert, E., &#38; Holzknecht, L. (2025). Triples as links between binary Black Hole mergers, their electromagnetic counterparts, and galactic Black Holes. <i>The Astrophysical Journal Letters</i>. IOP Publishing. <a href=\"https://doi.org/10.3847/2041-8213/ae0a20\">https://doi.org/10.3847/2041-8213/ae0a20</a>","ama":"Naoz S, Haiman Z, Quataert E, Holzknecht L. Triples as links between binary Black Hole mergers, their electromagnetic counterparts, and galactic Black Holes. <i>The Astrophysical Journal Letters</i>. 2025;992(1). doi:<a href=\"https://doi.org/10.3847/2041-8213/ae0a20\">10.3847/2041-8213/ae0a20</a>","short":"S. Naoz, Z. Haiman, E. Quataert, L. Holzknecht, The Astrophysical Journal Letters 992 (2025)."},"file":[{"date_created":"2025-10-23T09:09:30Z","success":1,"creator":"dernst","content_type":"application/pdf","access_level":"open_access","checksum":"cb81d666f6d7638a5bcf45653d25bcb3","relation":"main_file","file_id":"20520","date_updated":"2025-10-23T09:09:30Z","file_name":"2025_AstrophysicalJour_Naoz.pdf","file_size":8787316}],"publication_status":"published","author":[{"full_name":"Naoz, Smadar","last_name":"Naoz","first_name":"Smadar"},{"orcid":"0000-0003-3633-5403","last_name":"Haiman","full_name":"Haiman, Zoltán","id":"7c006e8c-cc0d-11ee-8322-cb904ef76f36","first_name":"Zoltán"},{"full_name":"Quataert, Eliot","last_name":"Quataert","first_name":"Eliot"},{"full_name":"Holzknecht, Liz","last_name":"Holzknecht","first_name":"Liz"}],"intvolume":"       992","date_created":"2025-10-19T22:01:31Z","doi":"10.3847/2041-8213/ae0a20","publisher":"IOP Publishing","OA_place":"publisher","year":"2025","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"abstract":[{"text":"We propose a formation pathway linking black holes (BHs) observed in gravitational-wave (GW) mergers, wide BH–stellar systems uncovered by Gaia, and accreting low-mass X-ray binaries (LMXBs). In this scenario, a stellar-mass BH binary undergoes isolated binary evolution and merges while hosting a distant, dynamically unimportant tertiary stellar companion. The tertiary becomes relevant only after the merger, when the remnant BH receives a GW recoil kick. Depending on the kick velocity and system configuration, the outcome can be: (1) a bright electromagnetic (EM) counterpart to the GW merger; (2) an LMXB; (3) a wide BH–stellar companion system resembling the Gaia BH population; or (4) an unbound isolated BH. Modeling the three-body dynamics, we find that ∼0.02% of LIGO–Virgo–KAGRA (LVK) mergers may be followed by an EM counterpart within ∼10 days, produced by tidal disruption of the star by the BH. The flare is likely brightest in the optical–UV and lasts for days to weeks; in some cases, partial disruption causes recurring flares with a period of ∼2 months. We further estimate that this channel can produce ∼1%–10% of Gaia BH systems in the Milky Way. This scenario provides the first physically motivated link between GW sources, Gaia BHs, and some X-ray binaries, and predicts a rare but robust pathway for EM counterparts to binary BH mergers, potentially detectable in LVK’s O5 run.","lang":"eng"}],"_id":"20493","scopus_import":"1","OA_type":"gold","acknowledgement":"We thank the anonymous referee for the useful and detailed report. S.N. acknowledges the partial support of NSF-BSF grant AST-2206428 and NASA XRP grant 80NSSC23K0262, as well as Howard and Astrid Preston for their generous support. Z.H. acknowledges support from NASA grants 80NSSC22K0822 and 80NSSC24K0440. E.Q. thanks the Gordon and Betty Moore Foundation for support through grant GBMF5076.","license":"https://creativecommons.org/licenses/by/4.0/","article_processing_charge":"Yes","day":"10","file_date_updated":"2025-10-23T09:09:30Z","language":[{"iso":"eng"}],"volume":992,"has_accepted_license":"1","month":"10","publication":"The Astrophysical Journal Letters","isi":1,"publication_identifier":{"eissn":["2041-8213"],"issn":["2041-8205"]},"oa_version":"Published Version","PlanS_conform":"1","article_type":"original","date_updated":"2026-02-16T12:44:56Z","quality_controlled":"1","department":[{"_id":"ZoHa"}],"type":"journal_article","issue":"1","title":"Triples as links between binary Black Hole mergers, their electromagnetic counterparts, and galactic Black Holes","ddc":["520"],"arxiv":1,"article_number":"L12","external_id":{"isi":["001589455900001"],"arxiv":["2508.13270"]}},{"type":"journal_article","external_id":{"isi":["001588901100004"],"arxiv":["2410.11035"]},"ddc":["520"],"article_number":"A50","title":"GA-NIFS and EIGER: A merging quasar host at z = 7 with an overmassive black hole","arxiv":1,"date_updated":"2026-02-16T12:13:28Z","article_type":"original","department":[{"_id":"JoMa"}],"quality_controlled":"1","PlanS_conform":"1","publication_identifier":{"eissn":["1432-0746"],"issn":["0004-6361"]},"oa_version":"Published Version","language":[{"iso":"eng"}],"file_date_updated":"2025-10-20T07:42:18Z","publication":"Astronomy & Astrophysics","isi":1,"month":"10","has_accepted_license":"1","volume":702,"day":"01","article_processing_charge":"No","abstract":[{"text":"The James Webb Space Telescope is revolutionising our ability to understand the host galaxies and local environments of high-z quasars. Here we obtain a comprehensive understanding of the host galaxy of the z = 7.08 quasar J1120+0641 by combining NIRSpec integral field spectroscopy with NIRCam photometry of the host continuum emission. Our emission-line maps reveal that this quasar host is undergoing a merger with a bright companion galaxy. The quasar host and the companion have similar dynamical masses of ∼1010 M⊙, suggesting that this is a major galaxy interaction. Through detailed quasar subtraction and SED fitting using the NIRCam data, we obtained an estimate of the host stellar mass of M* = (3.0−1.4+2.5) × 109 M⊙, with M∗ = (2.7−0.5+0.5) × 109 M⊙ for the companion galaxy. Using the Hβ Balmer line, we estimated a virial black hole mass of MBH = (1.9−1.1+2.9) × 109 M⊙. Thus, J1120+0641 has an extreme black hole–stellar mass ratio of MBH/M* = 0.63−0.31+0.54, which is ∼3 dex larger than expected by the local scaling relations between black hole and stellar mass. J1120+0641 is powered by an overmassive black hole with the highest reported black hole–stellar mass ratio in a quasar host that is currently undergoing a major merger. These new insights highlight the power of JWST for measuring and understanding these extreme first quasars.","lang":"eng"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"year":"2025","acknowledgement":"This work is based on observations made with the NASA/ESA/CSA James Webb Space Telescope. The data were obtained from the Mikulski Archive for Space Telescopes at the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-03127 for JWST. These observations are associated with program #1263, as part of the Galaxy Assembly with NIRSpec Integral Field Spectroscopy GTO program, and program #1243, as part of the Emission-line galaxies and Intergalactic Gas in the Epoch of Reionization GTO program. We thank Ignas Juodžbalis for helping with the compilation of BH–stellar mass measurements from the literature. We thank the referee for their helpful feedback. MAM acknowledges support by the Laboratory Directed Research and Development program of Los Alamos National Laboratory under project number 20240752PRD1. The project leading to this publication has received support from ORP, that is funded by the European Union’s Horizon 2020 research and innovation programme under grant agreement No 101004719 [ORP]. MP, SA and BRdP acknowledge grant PID2021-127718NB-I00 funded by the Spanish Ministry of Science and Innovation/State Agency of Research (MICIN/AEI/ 10.13039/501100011033). JS, RM and FDE acknowledge support by the Science and Technology Facilities Council (STFC), from the ERC Advanced Grant 695671 “QUENCH”. JS and FDE acknowledge the UKRI Frontier Research grant RISEandFALL. RM acknowledges funding from a research professorship from the Royal Society. HÜ acknowledges funding by the European Union (ERC APEX, 101164796). Views and opinions expressed are however those of the authors only and do not necessarily reflect those of the European Union or the European Research Council Executive Agency. Neither the European Union nor the granting authority can be held responsible for them. SC and GV acknowledge support from the European Union (ERC, WINGS,101040227). AJB and GCJ acknowledge funding from the “FirstGalaxies” Advanced Grant from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (Grant agreement No. 789056). DK acknowledges funding from JSPS KAKENHI Grant Number JP21K13956. This research has made use of the Astrophysics Data System, funded by NASA under Cooperative Agreement 80NSSC21M00561, QFitsView (Ott 2012), and SAOImageDS9, developed by Smithsonian Astrophysical Observatory. This paper made use of Python packages and software AstroPy (Astropy Collaboration 2013), jwst (Bushouse et al. 2022), Matplotlib (Hunter 2007), NumPy (van der Walt et al. 2011), Pandas (Pandas Development Team 2020), Photutils (Bradley et al. 2018), Prospector (Johnson et al. 2021), psfMC (Mechtley 2019), Regions (Bradley et al. 2022), SciPy (Virtanen et al. 2020), Seaborn (Waskom 2021), Spectral Cube (Ginsburg et al. 2019), QDeblend3D (Husemann et al. 2013, 2014), QubeSpec (https://github.com/honzascholtz/Qubespec), and WebbPSF (Perrin et al. 2015).","scopus_import":"1","OA_type":"diamond","_id":"20494","publisher":"EDP Sciences","date_created":"2025-10-19T22:01:32Z","doi":"10.1051/0004-6361/202452650","intvolume":"       702","author":[{"full_name":"Marshall, Madeline A.","last_name":"Marshall","first_name":"Madeline A."},{"first_name":"Minghao","full_name":"Yue, Minghao","last_name":"Yue"},{"first_name":"Anna Christina","full_name":"Eilers, Anna Christina","last_name":"Eilers"},{"full_name":"Scholtz, Jan","last_name":"Scholtz","first_name":"Jan"},{"first_name":"Michele","full_name":"Perna, Michele","last_name":"Perna"},{"full_name":"Willott, Chris J.","last_name":"Willott","first_name":"Chris J."},{"full_name":"Maiolino, Roberto","last_name":"Maiolino","first_name":"Roberto"},{"first_name":"Hannah","last_name":"Übler","full_name":"Übler, Hannah"},{"full_name":"Arribas, Santiago","last_name":"Arribas","first_name":"Santiago"},{"first_name":"Andrew J.","last_name":"Bunker","full_name":"Bunker, Andrew J."},{"last_name":"Charlot","full_name":"Charlot, Stephane","first_name":"Stephane"},{"first_name":"Bruno","last_name":"Rodríguez Del Pino","full_name":"Rodríguez Del Pino, Bruno"},{"first_name":"Torsten","last_name":"Böker","full_name":"Böker, Torsten"},{"full_name":"Carniani, Stefano","last_name":"Carniani","first_name":"Stefano"},{"full_name":"Circosta, Chiara","last_name":"Circosta","first_name":"Chiara"},{"first_name":"Giovanni","full_name":"Cresci, Giovanni","last_name":"Cresci"},{"full_name":"D'Eugenio, Francesco","last_name":"D'Eugenio","first_name":"Francesco"},{"full_name":"Jones, Gareth C.","last_name":"Jones","first_name":"Gareth C."},{"last_name":"Venturi","full_name":"Venturi, Giacomo","first_name":"Giacomo"},{"last_name":"Bordoloi","full_name":"Bordoloi, Rongmon","first_name":"Rongmon"},{"last_name":"Kashino","full_name":"Kashino, Daichi","first_name":"Daichi"},{"first_name":"Ruari","last_name":"Mackenzie","full_name":"Mackenzie, Ruari"},{"first_name":"Jorryt J","id":"7439a258-f3c0-11ec-9501-9df22fe06720","full_name":"Matthee, Jorryt J","last_name":"Matthee","orcid":"0000-0003-2871-127X"},{"first_name":"Rohan","full_name":"Naidu, Rohan","last_name":"Naidu"},{"first_name":"Robert A.","full_name":"Simcoe, Robert A.","last_name":"Simcoe"}],"OA_place":"publisher","date_published":"2025-10-01T00:00:00Z","citation":{"short":"M.A. Marshall, M. Yue, A.C. Eilers, J. Scholtz, M. Perna, C.J. Willott, R. Maiolino, H. Übler, S. Arribas, A.J. Bunker, S. Charlot, B. Rodríguez Del Pino, T. Böker, S. Carniani, C. Circosta, G. Cresci, F. D’Eugenio, G.C. Jones, G. Venturi, R. Bordoloi, D. Kashino, R. Mackenzie, J.J. Matthee, R. Naidu, R.A. Simcoe, Astronomy &#38; Astrophysics 702 (2025).","ama":"Marshall MA, Yue M, Eilers AC, et al. GA-NIFS and EIGER: A merging quasar host at z = 7 with an overmassive black hole. <i>Astronomy &#38; Astrophysics</i>. 2025;702. doi:<a href=\"https://doi.org/10.1051/0004-6361/202452650\">10.1051/0004-6361/202452650</a>","apa":"Marshall, M. A., Yue, M., Eilers, A. C., Scholtz, J., Perna, M., Willott, C. J., … Simcoe, R. A. (2025). GA-NIFS and EIGER: A merging quasar host at z = 7 with an overmassive black hole. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a href=\"https://doi.org/10.1051/0004-6361/202452650\">https://doi.org/10.1051/0004-6361/202452650</a>","mla":"Marshall, Madeline A., et al. “GA-NIFS and EIGER: A Merging Quasar Host at z = 7 with an Overmassive Black Hole.” <i>Astronomy &#38; Astrophysics</i>, vol. 702, A50, EDP Sciences, 2025, doi:<a href=\"https://doi.org/10.1051/0004-6361/202452650\">10.1051/0004-6361/202452650</a>.","ista":"Marshall MA, Yue M, Eilers AC, Scholtz J, Perna M, Willott CJ, Maiolino R, Übler H, Arribas S, Bunker AJ, Charlot S, Rodríguez Del Pino B, Böker T, Carniani S, Circosta C, Cresci G, D’Eugenio F, Jones GC, Venturi G, Bordoloi R, Kashino D, Mackenzie R, Matthee JJ, Naidu R, Simcoe RA. 2025. GA-NIFS and EIGER: A merging quasar host at z = 7 with an overmassive black hole. Astronomy &#38; Astrophysics. 702, A50.","chicago":"Marshall, Madeline A., Minghao Yue, Anna Christina Eilers, Jan Scholtz, Michele Perna, Chris J. Willott, Roberto Maiolino, et al. “GA-NIFS and EIGER: A Merging Quasar Host at z = 7 with an Overmassive Black Hole.” <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2025. <a href=\"https://doi.org/10.1051/0004-6361/202452650\">https://doi.org/10.1051/0004-6361/202452650</a>.","ieee":"M. A. Marshall <i>et al.</i>, “GA-NIFS and EIGER: A merging quasar host at z = 7 with an overmassive black hole,” <i>Astronomy &#38; Astrophysics</i>, vol. 702. EDP Sciences, 2025."},"publication_status":"published","file":[{"success":1,"creator":"dernst","date_created":"2025-10-20T07:42:18Z","checksum":"ae625d3ebda7483bd61ecb3c497d0de9","access_level":"open_access","relation":"main_file","content_type":"application/pdf","file_id":"20497","date_updated":"2025-10-20T07:42:18Z","file_name":"2025_AstronomyAstrophysics_Marshall.pdf","file_size":3871156}],"status":"public","oa":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"},{"author":[{"full_name":"Cárdenas, Esteban","last_name":"Cárdenas","first_name":"Esteban"},{"first_name":"David Johannes","id":"cbddacee-2b11-11eb-a02e-a2e14d04e52d","last_name":"Mitrouskas","full_name":"Mitrouskas, David Johannes"}],"date_created":"2025-10-19T22:01:32Z","doi":"10.1007/s00023-025-01626-3","publisher":"Springer Nature","OA_place":"repository","date_published":"2025-10-03T00:00:00Z","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2405.05251","open_access":"1"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa":1,"status":"public","publication_status":"epub_ahead","citation":{"ieee":"E. Cárdenas and D. J. Mitrouskas, “Radiative corrections to the dynamics of a tracer particle coupled to a Bose ccalar field,” <i>Annales Henri Poincare</i>. Springer Nature, 2025.","chicago":"Cárdenas, Esteban, and David Johannes Mitrouskas. “Radiative Corrections to the Dynamics of a Tracer Particle Coupled to a Bose Ccalar Field.” <i>Annales Henri Poincare</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s00023-025-01626-3\">https://doi.org/10.1007/s00023-025-01626-3</a>.","ista":"Cárdenas E, Mitrouskas DJ. 2025. Radiative corrections to the dynamics of a tracer particle coupled to a Bose ccalar field. Annales Henri Poincare.","mla":"Cárdenas, Esteban, and David Johannes Mitrouskas. “Radiative Corrections to the Dynamics of a Tracer Particle Coupled to a Bose Ccalar Field.” <i>Annales Henri Poincare</i>, Springer Nature, 2025, doi:<a href=\"https://doi.org/10.1007/s00023-025-01626-3\">10.1007/s00023-025-01626-3</a>.","apa":"Cárdenas, E., &#38; Mitrouskas, D. J. (2025). Radiative corrections to the dynamics of a tracer particle coupled to a Bose ccalar field. <i>Annales Henri Poincare</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00023-025-01626-3\">https://doi.org/10.1007/s00023-025-01626-3</a>","short":"E. Cárdenas, D.J. Mitrouskas, Annales Henri Poincare (2025).","ama":"Cárdenas E, Mitrouskas DJ. Radiative corrections to the dynamics of a tracer particle coupled to a Bose ccalar field. <i>Annales Henri Poincare</i>. 2025. doi:<a href=\"https://doi.org/10.1007/s00023-025-01626-3\">10.1007/s00023-025-01626-3</a>"},"day":"03","article_processing_charge":"No","year":"2025","abstract":[{"lang":"eng","text":"We consider a tracer particle coupled to a Bose scalar field and study the regime where the field’s propagation speed approaches infinity. For initial states devoid of field excitations, we introduce an effective approximation of the time-evolved wave function and prove its validity in Hilbert space norm. In this approximation, the field remains in the vacuum state, while the tracer particle propagates with a modified dispersion relation. Physically, the new dispersion relation can be understood as the effect of radiative corrections due to interactions with virtual bosons. Mathematically, it is defined as the solution of a self-consistent nonlinear equation, whose form depends on the relevant time scale."}],"_id":"20495","OA_type":"green","scopus_import":"1","acknowledgement":"E.C. is deeply grateful to Robert Seiringer for his hospitality at ISTA, without which this project would not have been possible. E.C. is thankful to Thomas Chen for valuable comments and for pointing out useful references. E.C gratefully acknowledges support from the Provost’s Graduate Excellence Fellowship at The University of Texas at Austin and from the NSF grant DMS-2009549, and the NSF grant DMS-2009800 through T. Chen. This material is based upon work supported by the National Science Foundation under Grant No. DMS-1928930, while E.C was in residence at the Simons Laufer Mathematical Sciences Institute in Berkeley, California, during the Fall 2025 semester.","publication_identifier":{"issn":["1424-0637"]},"oa_version":"Preprint","language":[{"iso":"eng"}],"isi":1,"publication":"Annales Henri Poincare","month":"10","type":"journal_article","external_id":{"arxiv":["2405.05251"],"isi":["001586237500001"]},"title":"Radiative corrections to the dynamics of a tracer particle coupled to a Bose ccalar field","arxiv":1,"article_type":"original","date_updated":"2025-12-01T12:56:12Z","quality_controlled":"1","department":[{"_id":"RoSe"}]},{"language":[{"iso":"eng"}],"isi":1,"month":"09","publication":"Advanced Materials","has_accepted_license":"1","PlanS_conform":"1","oa_version":"Published Version","publication_identifier":{"issn":["0935-9648"],"eissn":["1521-4095"]},"project":[{"_id":"9B8F7476-BA93-11EA-9121-9846C619BF3A","name":"HighTE: The Werner Siemens Laboratory for the High Throughput Discovery of Semiconductors for Waste Heat Recovery"}],"article_type":"original","date_updated":"2025-12-01T12:56:48Z","department":[{"_id":"MaIb"}],"quality_controlled":"1","type":"journal_article","article_number":"e10906","title":"Crystal growth engineering for dendrite-free Zinc metal plating","ddc":["530"],"external_id":{"isi":["001583809400001"],"pmid":["41025826"]},"date_published":"2025-09-30T00:00:00Z","status":"public","oa":1,"publication_status":"epub_ahead","citation":{"short":"G. Zeng, S. Horta, Q. Sun, M.D. Khan, M. Ibáñez, Y. Han, S. Wang, L. Li, L. Ci, Y. Tian, A. Cabot, Advanced Materials (2025).","ama":"Zeng G, Horta S, Sun Q, et al. Crystal growth engineering for dendrite-free Zinc metal plating. <i>Advanced Materials</i>. 2025. doi:<a href=\"https://doi.org/10.1002/adma.202510906\">10.1002/adma.202510906</a>","apa":"Zeng, G., Horta, S., Sun, Q., Khan, M. D., Ibáñez, M., Han, Y., … Cabot, A. (2025). Crystal growth engineering for dendrite-free Zinc metal plating. <i>Advanced Materials</i>. Wiley. <a href=\"https://doi.org/10.1002/adma.202510906\">https://doi.org/10.1002/adma.202510906</a>","chicago":"Zeng, Guifang, Sharona Horta, Qing Sun, Malik Dilshad Khan, Maria Ibáñez, Yuhang Han, Shang Wang, et al. “Crystal Growth Engineering for Dendrite-Free Zinc Metal Plating.” <i>Advanced Materials</i>. Wiley, 2025. <a href=\"https://doi.org/10.1002/adma.202510906\">https://doi.org/10.1002/adma.202510906</a>.","ieee":"G. Zeng <i>et al.</i>, “Crystal growth engineering for dendrite-free Zinc metal plating,” <i>Advanced Materials</i>. Wiley, 2025.","ista":"Zeng G, Horta S, Sun Q, Khan MD, Ibáñez M, Han Y, Wang S, Li L, Ci L, Tian Y, Cabot A. 2025. Crystal growth engineering for dendrite-free Zinc metal plating. Advanced Materials., e10906.","mla":"Zeng, Guifang, et al. “Crystal Growth Engineering for Dendrite-Free Zinc Metal Plating.” <i>Advanced Materials</i>, e10906, Wiley, 2025, doi:<a href=\"https://doi.org/10.1002/adma.202510906\">10.1002/adma.202510906</a>."},"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1002/adma.202510906"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2025-10-19T22:01:32Z","doi":"10.1002/adma.202510906","pmid":1,"publisher":"Wiley","author":[{"full_name":"Zeng, Guifang","last_name":"Zeng","first_name":"Guifang"},{"last_name":"Horta","full_name":"Horta, Sharona","first_name":"Sharona","id":"03a7e858-01b1-11ec-8b71-99ae6c4a05bc"},{"first_name":"Qing","last_name":"Sun","full_name":"Sun, Qing"},{"full_name":"Khan, Malik Dilshad","last_name":"Khan","first_name":"Malik Dilshad"},{"first_name":"Maria","id":"43C61214-F248-11E8-B48F-1D18A9856A87","last_name":"Ibáñez","orcid":"0000-0001-5013-2843","full_name":"Ibáñez, Maria"},{"first_name":"Yuhang","full_name":"Han, Yuhang","last_name":"Han"},{"first_name":"Shang","full_name":"Wang, Shang","last_name":"Wang"},{"last_name":"Li","full_name":"Li, Longqiu","first_name":"Longqiu"},{"first_name":"Lijie","full_name":"Ci, Lijie","last_name":"Ci"},{"first_name":"Yanhong","last_name":"Tian","full_name":"Tian, Yanhong"},{"first_name":"Andreu","last_name":"Cabot","full_name":"Cabot, Andreu"}],"OA_place":"publisher","acknowledged_ssus":[{"_id":"NanoFab"},{"_id":"EM-Fac"}],"year":"2025","abstract":[{"lang":"eng","text":"The practical implementation of aqueous zinc-ion batteries (AZIBs) is limited by uncontrolled zinc (Zn) dendrite growth during anode plating, compromising both safety and cycle life. Typically, Zn plating proceeds via 2D growth along the six equivalent prismatic [1010] directions of the hexagonal close-packed (HCP) Zn lattice, forming hexagonal platelets that promote dendrite formation. Here, an effective electrolyte engineering strategy is presented using rare-earth ions to regulate Zn plating. Combined multiscale experimental analyses and computational modeling reveal that these ions preferentially adsorb onto the prismatic {1010} facets, suppressing lateral epitaxial growth of the basal (0002) planes. This redirects Zn plating toward an apparent screw dislocation-driven growth along the [0001] axis. The resulting growth pathway, together with randomly oriented Zn nucleation, yields dense, uniform, and dendrite-free Zn layers with markedly improved cycling stability and high depth-of-discharge operation, thereby challenging the prevailing assumption that dendrite suppression requires (0002)-oriented growth parallel to the substrate. This work provides new mechanistic insights into Zn plating dynamics and establishes a scalable strategy for stable, dendrite-free Zn anodes in next-generation AZIBs."}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"acknowledgement":"M.I. and S.H. acknowledge financial support from ISTA and the Werner Siemens Foundation. Q.S. acknowledges financial support from the European Union's Horizon Europe Research and Innovation Programme under the Marie Skłodowska-Curie Grant Agreement No. 101211154. This work was supported by the Generalitat de Catalunya (Grant No. 2021SGR01581), the National Natural Science Foundation of China (Grant Nos. 52125505 and 52475336), and the Joint Fund of Henan Province Science and Technology R&D Program (Grant No. 235200810097). Part of this research was carried out with support from the Scientific Service Units (SSU) of the Institute of Science and Technology Austria (ISTA), utilizing resources provided by the Electron Microscopy Facility (EMF) and the Nanofabrication Facility (NFF).","_id":"20496","scopus_import":"1","OA_type":"hybrid","day":"30","article_processing_charge":"Yes (in subscription journal)"},{"PlanS_conform":"1","oa_version":"Published Version","publication_identifier":{"eissn":["1079-7114"],"issn":["0031-9007"]},"language":[{"iso":"eng"}],"file_date_updated":"2025-10-21T07:44:24Z","month":"10","publication":"Physical Review Letters","volume":135,"has_accepted_license":"1","issue":"16","type":"journal_article","article_number":"166303","arxiv":1,"ddc":["530"],"external_id":{"arxiv":["2501.08381"]},"title":"Superdiffusive transport in chaotic quantum systems with nodal interactions","date_updated":"2025-10-21T07:47:07Z","article_type":"original","quality_controlled":"1","department":[{"_id":"MaSe"}],"publisher":"American Physical Society","date_created":"2025-10-20T11:07:35Z","doi":"10.1103/xx9z-4j6c","intvolume":"       135","author":[{"id":"6a394bd3-0984-11f0-8835-a92b812ec257","first_name":"Yupeng","last_name":"Wang","full_name":"Wang, Yupeng"},{"full_name":"Ren, Jie","last_name":"Ren","first_name":"Jie"},{"first_name":"Sarang","full_name":"Gopalakrishnan, Sarang","last_name":"Gopalakrishnan"},{"first_name":"Romain","full_name":"Vasseur, Romain","last_name":"Vasseur"}],"OA_place":"publisher","date_published":"2025-10-15T00:00:00Z","corr_author":"1","publication_status":"published","file":[{"creator":"dernst","success":1,"date_created":"2025-10-21T07:44:24Z","checksum":"928c2991aef252fe81d476b61806743f","relation":"main_file","access_level":"open_access","content_type":"application/pdf","file_name":"2025_PhysReviewLetters_Wang.pdf","file_size":388263,"date_updated":"2025-10-21T07:44:24Z","file_id":"20512"}],"citation":{"ama":"Wang Y, Ren J, Gopalakrishnan S, Vasseur R. Superdiffusive transport in chaotic quantum systems with nodal interactions. <i>Physical Review Letters</i>. 2025;135(16). doi:<a href=\"https://doi.org/10.1103/xx9z-4j6c\">10.1103/xx9z-4j6c</a>","short":"Y. Wang, J. Ren, S. Gopalakrishnan, R. Vasseur, Physical Review Letters 135 (2025).","apa":"Wang, Y., Ren, J., Gopalakrishnan, S., &#38; Vasseur, R. (2025). Superdiffusive transport in chaotic quantum systems with nodal interactions. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/xx9z-4j6c\">https://doi.org/10.1103/xx9z-4j6c</a>","ista":"Wang Y, Ren J, Gopalakrishnan S, Vasseur R. 2025. Superdiffusive transport in chaotic quantum systems with nodal interactions. Physical Review Letters. 135(16), 166303.","mla":"Wang, Yupeng, et al. “Superdiffusive Transport in Chaotic Quantum Systems with Nodal Interactions.” <i>Physical Review Letters</i>, vol. 135, no. 16, 166303, American Physical Society, 2025, doi:<a href=\"https://doi.org/10.1103/xx9z-4j6c\">10.1103/xx9z-4j6c</a>.","chicago":"Wang, Yupeng, Jie Ren, Sarang Gopalakrishnan, and Romain Vasseur. “Superdiffusive Transport in Chaotic Quantum Systems with Nodal Interactions.” <i>Physical Review Letters</i>. American Physical Society, 2025. <a href=\"https://doi.org/10.1103/xx9z-4j6c\">https://doi.org/10.1103/xx9z-4j6c</a>.","ieee":"Y. Wang, J. Ren, S. Gopalakrishnan, and R. Vasseur, “Superdiffusive transport in chaotic quantum systems with nodal interactions,” <i>Physical Review Letters</i>, vol. 135, no. 16. American Physical Society, 2025."},"oa":1,"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"Yes (via OA deal)","day":"15","abstract":[{"lang":"eng","text":"We introduce a class of interacting fermionic quantum models in d dimensions with nodal interactions that exhibit superdiffusive transport. We establish nonperturbatively that the nodal structure of the interactions gives rise to long-lived quasiparticle excitations that result in a diverging diffusion constant, even though the system is fully chaotic. Using a Boltzmann equation approach, we find that the charge mode acquires an anomalous dispersion relation at long wavelength ωðqÞ ∼ qz with dynamical exponent z ¼ min½ð2n þ dÞ=2n; 2, where n is the order of the nodal point in momentum space. We verify our predictions in one-dimensional systems using tensor-network techniques."}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"year":"2025","acknowledgement":"Y.-P. W. thanks Chen Fang, Marko Žnidarič, Enej Ilievski, and Curt von Keyserlingk for useful\r\ndiscussion. Y.-P. W. is supported by Chinese Academy of Sciences under Grant No. XDB33020000, National Natural Science Foundation of China (NSFC) under Grants No. 12325404 and No. 12188101 and National Key R&D Program of China under Grants\r\nNo. 2022YFA1403800 and No. 2023YFA1406704. S. G. acknowledges support from NSF No. QuSEC-TAQS OSI 2326767. J. R. acknowledges support by the Leverhulme Trust Research Leadership Award No. RL-2019-015. R. V. acknowledges partial support from the U.S. Department of Energy, Office of Science, Basic Energy Sciences, under Award No. DE-SC0023999.","scopus_import":"1","OA_type":"hybrid","_id":"20503"},{"article_processing_charge":"Yes (via OA deal)","day":"11","year":"2025","abstract":[{"lang":"eng","text":"Let r, k,  be integers such that 0 ≤  ≤ (k/r). Given a large r-uniform hypergraph G, we consider the\r\nfraction of k-vertex subsets that span exactly  edges. If  is 0 or (k/r), this fraction can be exactly 1 (by taking G to be empty or complete), but for all other values of , one might suspect that this fraction is always significantly smaller than 1.\r\nIn this paper we prove an essentially optimal result along these lines: if  is not 0 or (k/r), then this\r\nfraction is at most (1/e) + ε, assuming k is sufficiently large in terms of r and ε > 0, and G is sufficiently large in terms of k. Previously, this was only known for a very limited range of values of r, k,  (due to Kwan–Sudakov–Tran, Fox–Sauermann, and Martinsson–Mousset–Noever–Trujic). Our result answers a question of Alon–Hefetz–Krivelevich–Tyomkyn, who suggested this as a hypergraph generalization of their edge-statistics conjecture. We also prove a much stronger bound when  is far from 0 and (k/r)."}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"_id":"20504","OA_type":"hybrid","scopus_import":"1","acknowledgement":"This work was supported by NSF CAREER award DMS-2237646 [to V.J.], ERC Starting Grant “RANDSTRUCT” [no. 101076777 to M.K.], NSF grant DMS-2153576 [to D.M.], and the National Key Research and Development Program of China [2023YFA101020 to T.T.].\r\nWe would like to thank Lisa Sauermann for her helpful comments. We would also like to thank Alex Grebennikov for identifying an oversight in the application of Theorem 7.1 (in a previous version of this paper).","author":[{"first_name":"Vishesh","full_name":"Jain, Vishesh","last_name":"Jain"},{"last_name":"Kwan","orcid":"0000-0002-4003-7567","full_name":"Kwan, Matthew Alan","first_name":"Matthew Alan","id":"5fca0887-a1db-11eb-95d1-ca9d5e0453b3"},{"last_name":"Mubayi","full_name":"Mubayi, Dhruv","first_name":"Dhruv"},{"first_name":"Tuan","last_name":"Tran","full_name":"Tran, Tuan"}],"intvolume":"      2025","doi":"10.1093/imrn/rnaf273","date_created":"2025-10-20T11:08:57Z","publisher":"Oxford University Press","OA_place":"publisher","date_published":"2025-09-11T00:00:00Z","corr_author":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","oa":1,"citation":{"short":"V. Jain, M.A. Kwan, D. Mubayi, T. Tran, International Mathematics Research Notices 2025 (2025).","ama":"Jain V, Kwan MA, Mubayi D, Tran T. The edge-statistics conjecture for hypergraphs. <i>International Mathematics Research Notices</i>. 2025;2025(18). doi:<a href=\"https://doi.org/10.1093/imrn/rnaf273\">10.1093/imrn/rnaf273</a>","apa":"Jain, V., Kwan, M. A., Mubayi, D., &#38; Tran, T. (2025). The edge-statistics conjecture for hypergraphs. <i>International Mathematics Research Notices</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/imrn/rnaf273\">https://doi.org/10.1093/imrn/rnaf273</a>","ieee":"V. Jain, M. A. Kwan, D. Mubayi, and T. Tran, “The edge-statistics conjecture for hypergraphs,” <i>International Mathematics Research Notices</i>, vol. 2025, no. 18. Oxford University Press, 2025.","chicago":"Jain, Vishesh, Matthew Alan Kwan, Dhruv Mubayi, and Tuan Tran. “The Edge-Statistics Conjecture for Hypergraphs.” <i>International Mathematics Research Notices</i>. Oxford University Press, 2025. <a href=\"https://doi.org/10.1093/imrn/rnaf273\">https://doi.org/10.1093/imrn/rnaf273</a>.","mla":"Jain, Vishesh, et al. “The Edge-Statistics Conjecture for Hypergraphs.” <i>International Mathematics Research Notices</i>, vol. 2025, no. 18, rnaf273, Oxford University Press, 2025, doi:<a href=\"https://doi.org/10.1093/imrn/rnaf273\">10.1093/imrn/rnaf273</a>.","ista":"Jain V, Kwan MA, Mubayi D, Tran T. 2025. The edge-statistics conjecture for hypergraphs. International Mathematics Research Notices. 2025(18), rnaf273."},"file":[{"access_level":"open_access","checksum":"016aa4df9453dc180ae7504ac77bf72f","relation":"main_file","content_type":"application/pdf","creator":"dernst","success":1,"date_created":"2025-10-21T07:36:56Z","file_id":"20511","date_updated":"2025-10-21T07:36:56Z","file_size":774323,"file_name":"2025_IMRN_Jain.pdf"}],"publication_status":"published","type":"journal_article","issue":"18","title":"The edge-statistics conjecture for hypergraphs","ddc":["510"],"external_id":{"isi":["001575137400001"],"arxiv":["2505.03954"]},"article_number":"rnaf273","arxiv":1,"article_type":"original","project":[{"grant_number":"101076777","name":"Randomness and structure in combinatorics","_id":"bd95085b-d553-11ed-ba76-e55d3349be45"}],"date_updated":"2025-12-01T13:00:35Z","department":[{"_id":"MaKw"}],"quality_controlled":"1","oa_version":"Published Version","publication_identifier":{"eissn":["1687-0247"],"issn":["1073-7928"]},"PlanS_conform":"1","file_date_updated":"2025-10-21T07:36:56Z","language":[{"iso":"eng"}],"volume":2025,"has_accepted_license":"1","publication":"International Mathematics Research Notices","isi":1,"month":"09"},{"type":"research_data_reference","ec_funded":1,"day":"18","article_processing_charge":"No","title":"No Time for Surface Charge: How Bulk Conductivity Hides Charge Patterns from Kelvin Probe Force Microscopy in Contact-Electrified Surfaces","ddc":["530"],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"abstract":[{"text":"Includes all data and Python code needed to reproduce figures for the publication: No Time for Surface Charge: How Bulk Conductivity Hides Charge Patterns from Kelvin Probe Force Microscopy in Contact-Electrified Surfaces.","lang":"eng"}],"date_updated":"2025-12-01T14:57:52Z","year":"2025","project":[{"call_identifier":"H2020","grant_number":"949120","_id":"0aa60e99-070f-11eb-9043-a6de6bdc3afa","name":"Tribocharge: a multi-scale approach to an enduring problem in physics"}],"department":[{"_id":"ScWa"}],"OA_type":"green","_id":"20523","publisher":"Zenodo","doi":"10.5281/ZENODO.14888054","date_created":"2025-10-23T09:34:58Z","oa_version":"Published Version","author":[{"first_name":"Felix","id":"6313aec0-15b2-11ec-abd3-ed67d16139af","full_name":"Pertl, Felix","last_name":"Pertl","orcid":"0000-0003-0463-5794"}],"OA_place":"repository","corr_author":"1","date_published":"2025-02-18T00:00:00Z","related_material":{"record":[{"status":"public","relation":"used_in_publication","id":"20481"}]},"citation":{"ista":"Pertl F. 2025. No Time for Surface Charge: How Bulk Conductivity Hides Charge Patterns from Kelvin Probe Force Microscopy in Contact-Electrified Surfaces, Zenodo, <a href=\"https://doi.org/10.5281/ZENODO.14888054\">10.5281/ZENODO.14888054</a>.","mla":"Pertl, Felix. <i>No Time for Surface Charge: How Bulk Conductivity Hides Charge Patterns from Kelvin Probe Force Microscopy in Contact-Electrified Surfaces</i>. Zenodo, 2025, doi:<a href=\"https://doi.org/10.5281/ZENODO.14888054\">10.5281/ZENODO.14888054</a>.","ieee":"F. Pertl, “No Time for Surface Charge: How Bulk Conductivity Hides Charge Patterns from Kelvin Probe Force Microscopy in Contact-Electrified Surfaces.” Zenodo, 2025.","chicago":"Pertl, Felix. “No Time for Surface Charge: How Bulk Conductivity Hides Charge Patterns from Kelvin Probe Force Microscopy in Contact-Electrified Surfaces.” Zenodo, 2025. <a href=\"https://doi.org/10.5281/ZENODO.14888054\">https://doi.org/10.5281/ZENODO.14888054</a>.","ama":"Pertl F. No Time for Surface Charge: How Bulk Conductivity Hides Charge Patterns from Kelvin Probe Force Microscopy in Contact-Electrified Surfaces. 2025. doi:<a href=\"https://doi.org/10.5281/ZENODO.14888054\">10.5281/ZENODO.14888054</a>","apa":"Pertl, F. (2025). No Time for Surface Charge: How Bulk Conductivity Hides Charge Patterns from Kelvin Probe Force Microscopy in Contact-Electrified Surfaces. Zenodo. <a href=\"https://doi.org/10.5281/ZENODO.14888054\">https://doi.org/10.5281/ZENODO.14888054</a>","short":"F. Pertl, (2025)."},"status":"public","month":"02","oa":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","has_accepted_license":"1","main_file_link":[{"open_access":"1","url":"https://doi.org/10.5281/ZENODO.14888054"}]},{"date_published":"2025-02-13T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","publication_status":"published","citation":{"mla":"Lee, Woojung, et al. “Formation of Metallocene Single-Molecule Junctions via Metal–Metal Bonds.” <i>Nano Letters</i>, vol. 25, no. 8, American Chemical Society, 2025, pp. 3316–22, doi:<a href=\"https://doi.org/10.1021/acs.nanolett.4c06450\">10.1021/acs.nanolett.4c06450</a>.","ista":"Lee W, Prindle CR, Shi W, Louie S, Steigerwald ML, Venkataraman L. 2025. Formation of metallocene single-molecule junctions via metal–metal bonds. Nano Letters. 25(8), 3316–3322.","ieee":"W. Lee, C. R. Prindle, W. Shi, S. Louie, M. L. Steigerwald, and L. Venkataraman, “Formation of metallocene single-molecule junctions via metal–metal bonds,” <i>Nano Letters</i>, vol. 25, no. 8. American Chemical Society, pp. 3316–3322, 2025.","chicago":"Lee, Woojung, Claudia R. Prindle, Wanzhuo Shi, Shayan Louie, Michael L. Steigerwald, and Latha Venkataraman. “Formation of Metallocene Single-Molecule Junctions via Metal–Metal Bonds.” <i>Nano Letters</i>. American Chemical Society, 2025. <a href=\"https://doi.org/10.1021/acs.nanolett.4c06450\">https://doi.org/10.1021/acs.nanolett.4c06450</a>.","short":"W. Lee, C.R. Prindle, W. Shi, S. Louie, M.L. Steigerwald, L. Venkataraman, Nano Letters 25 (2025) 3316–3322.","apa":"Lee, W., Prindle, C. R., Shi, W., Louie, S., Steigerwald, M. L., &#38; Venkataraman, L. (2025). Formation of metallocene single-molecule junctions via metal–metal bonds. <i>Nano Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acs.nanolett.4c06450\">https://doi.org/10.1021/acs.nanolett.4c06450</a>","ama":"Lee W, Prindle CR, Shi W, Louie S, Steigerwald ML, Venkataraman L. Formation of metallocene single-molecule junctions via metal–metal bonds. <i>Nano Letters</i>. 2025;25(8):3316-3322. doi:<a href=\"https://doi.org/10.1021/acs.nanolett.4c06450\">10.1021/acs.nanolett.4c06450</a>"},"author":[{"last_name":"Lee","full_name":"Lee, Woojung","first_name":"Woojung"},{"first_name":"Claudia R.","full_name":"Prindle, Claudia R.","last_name":"Prindle"},{"last_name":"Shi","full_name":"Shi, Wanzhuo","first_name":"Wanzhuo"},{"first_name":"Shayan","last_name":"Louie","full_name":"Louie, Shayan"},{"first_name":"Michael L.","full_name":"Steigerwald, Michael L.","last_name":"Steigerwald"},{"full_name":"Venkataraman, Latha","last_name":"Venkataraman","orcid":"0000-0002-6957-6089","id":"9ebb78a5-cc0d-11ee-8322-fae086a32caf","first_name":"Latha"}],"intvolume":"        25","pmid":1,"doi":"10.1021/acs.nanolett.4c06450","date_created":"2025-10-23T12:18:56Z","publisher":"American Chemical Society","year":"2025","abstract":[{"text":"We study single-molecule junction formation of group VIII metallocenes─ferrocene, ruthenocene, and osmocene─with gold (Au) electrodes using the scanning tunneling microscope-based break junction technique. Unlike ferrocene, both ruthenocene and osmocene can form molecular junctions under ambient conditions without chemical linkers. We propose that Au electrodes bind to the metal center and one of the cyclopentadienyl (Cp) rings via a ring-slippage process, forming a molecular junction. Control measurements demonstrate that the metal centers bind to uncoordinated Au exclusively in the +3 oxidation state. Ab initio quantum transport calculations corroborate this mechanism for metallocene junction formation. This work highlights the formation of metal–metal (Ru–Au and Os–Au) bonds in metallocene-based single-molecule devices, challenging the assumption that metallocenes bind exclusively through van der Waals interactions between the Cp ring and the Au electrode. Our findings introduce a method for creating organometallic single-molecule devices with metal–metal bonds, enabling more stable and versatile molecular electronics.","lang":"eng"}],"extern":"1","page":"3316-3322","_id":"20528","OA_type":"closed access","scopus_import":"1","day":"13","article_processing_charge":"No","language":[{"iso":"eng"}],"volume":25,"month":"02","publication":"Nano Letters","oa_version":"None","publication_identifier":{"issn":["1530-6984"],"eissn":["1530-6992"]},"article_type":"letter_note","date_updated":"2025-10-23T13:01:26Z","quality_controlled":"1","type":"journal_article","issue":"8","external_id":{"pmid":["39945435"]},"title":"Formation of metallocene single-molecule junctions via metal–metal bonds"},{"day":"21","article_processing_charge":"Yes (in subscription journal)","scopus_import":"1","OA_type":"hybrid","_id":"20530","acknowledgement":"We thank Matthew Kenneth for his assistance with live cell imaging. We thank Arthur Charles-Orszag and Dyche Mullins for generously gifting the SegA and SegB antibodies, and Sonja-Verena Albers for gifting the CdvA-HA overexpression plasmid. We thank the Light Microscopy and Flow Cytometry facilities at the MRC-LMB, and all the core staff at the MRC-LMB for their support. We thank all members of the Baum lab for helpful discussions. We would like to thank Magdalena Lechowska, Gautam Dey, Laura Downie, and Iva Tolic for critical reading of the manuscript. J.P. was supported by the Medical Research Council—Laboratory of Molecular Biology (MC_UP_1201/27). A.C. was funded by an EMBO Postdoctoral fellowship (ALTF_1041-2021), a Marie Sklodowska-Curie Individual Fellowship (101068523) provided by UKRI and by the Wellcome Trust (222460/Z/21/Z). B.H. was supported by Wellcome Trust (203276/A/16/Z). Y.-W.K. was supported by an EMBO postdoctoral fellowship (ALTF 903-2021) and by the Medical Research Council—Laboratory of Molecular Biology (MC_UP_1201/27); S.F. was supported by the Wellcome Trust (222460/Z/21/Z); B.B. received support from the MRC LMB, the Wellcome Trust (203276/Z/16/Z) and (222460/Z/21/Z), the VW Foundation (94933), and from the Gordon and Betty Moore Foundation’s Symbiosis in Aquatic Systems Initiative (9346). V.S. and A.Š. acknowledge funding from the European Research Council under the European Union’s Horizon 2020 research and innovation programme (grant no.802960 to A.Š.), the Vallee Scholarship, and the EMBO Young Investigator Programme (A.Š.). The collaborative work of A.Š.’s and B.B. teams was also supported by a Moore–Simons Project on the Origin of the Eukaryotic Cell, Simons Foundation 735929LPI.","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"abstract":[{"text":"Cells must coordinate DNA segregation with cytokinesis to ensure that each daughter cell inherits a complete genome. Here, we explore how DNA segregation and division are mechanistically coupled in archaeal relatives of eukaryotes, which lack Cyclin-dependent kinase (CDK)/Cyclins. Using live cell imaging, we first describe the series of sequential changes in DNA organization that accompany cell division in Sulfolobus, which computational modeling shows likely aid genome segregation. Through a perturbation analysis we identify a regulatory checkpoint which ensures that the compaction of the genome into two spatially segregated nucleoids only occurs once cells have assembled a division ring—which also defines the axis of DNA segregation. Finally, we show that DNA compaction and segregation depend, in part, on a ParA homologue, SegA, and its partner SegB, whose absence leads to bridging DNA. Taken together, these data show how regulatory checkpoints like those operating in eukaryotes aid high-fidelity division in an archaeon.","lang":"eng"}],"year":"2025","page":"e2513939122","OA_place":"publisher","intvolume":"       122","author":[{"full_name":"Parham, Joe","last_name":"Parham","first_name":"Joe"},{"last_name":"Sorichetti","orcid":"0000-0002-9645-6576","full_name":"Sorichetti, Valerio","first_name":"Valerio","id":"ef8a92cb-c7b6-11ec-8bea-e1fd5847bc5b"},{"last_name":"Cezanne","full_name":"Cezanne, Alice","first_name":"Alice"},{"first_name":"Sherman","last_name":"Foo","full_name":"Foo, Sherman"},{"first_name":"Yin Wei","full_name":"Kuo, Yin Wei","last_name":"Kuo"},{"first_name":"Baukje","last_name":"Hoogenberg","full_name":"Hoogenberg, Baukje"},{"full_name":"Radoux-Mergault, Arthur","last_name":"Radoux-Mergault","first_name":"Arthur"},{"last_name":"Mawdesley","full_name":"Mawdesley, Eloise","first_name":"Eloise"},{"last_name":"Gatward","full_name":"Gatward, Lydia Daniels","first_name":"Lydia Daniels"},{"first_name":"Jerome","full_name":"Boulanger, Jerome","last_name":"Boulanger"},{"first_name":"Ulrike","full_name":"Schulze, Ulrike","last_name":"Schulze"},{"orcid":"0000-0002-7854-2139","last_name":"Šarić","full_name":"Šarić, Anđela","id":"bf63d406-f056-11eb-b41d-f263a6566d8b","first_name":"Anđela"},{"full_name":"Baum, Buzz","last_name":"Baum","first_name":"Buzz"}],"publisher":"National Academy of Sciences","pmid":1,"doi":"10.1073/pnas.2513939122","date_created":"2025-10-26T23:01:33Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file":[{"content_type":"application/pdf","checksum":"3555d51f438d2e356039a9b697eac3ee","access_level":"open_access","relation":"main_file","date_created":"2025-10-27T08:12:59Z","success":1,"creator":"dernst","file_id":"20543","date_updated":"2025-10-27T08:12:59Z","file_size":2649194,"file_name":"2025_PNAS_Parham.pdf"}],"citation":{"ista":"Parham J, Sorichetti V, Cezanne A, Foo S, Kuo YW, Hoogenberg B, Radoux-Mergault A, Mawdesley E, Gatward LD, Boulanger J, Schulze U, Šarić A, Baum B. 2025. Temporal and spatial coordination of DNA segregation and cell division in an archaeon. Proceedings of the National Academy of Sciences. 122(42), e2513939122.","mla":"Parham, Joe, et al. “Temporal and Spatial Coordination of DNA Segregation and Cell Division in an Archaeon.” <i>Proceedings of the National Academy of Sciences</i>, vol. 122, no. 42, National Academy of Sciences, 2025, p. e2513939122, doi:<a href=\"https://doi.org/10.1073/pnas.2513939122\">10.1073/pnas.2513939122</a>.","ieee":"J. Parham <i>et al.</i>, “Temporal and spatial coordination of DNA segregation and cell division in an archaeon,” <i>Proceedings of the National Academy of Sciences</i>, vol. 122, no. 42. National Academy of Sciences, p. e2513939122, 2025.","chicago":"Parham, Joe, Valerio Sorichetti, Alice Cezanne, Sherman Foo, Yin Wei Kuo, Baukje Hoogenberg, Arthur Radoux-Mergault, et al. “Temporal and Spatial Coordination of DNA Segregation and Cell Division in an Archaeon.” <i>Proceedings of the National Academy of Sciences</i>. National Academy of Sciences, 2025. <a href=\"https://doi.org/10.1073/pnas.2513939122\">https://doi.org/10.1073/pnas.2513939122</a>.","short":"J. Parham, V. Sorichetti, A. Cezanne, S. Foo, Y.W. Kuo, B. Hoogenberg, A. Radoux-Mergault, E. Mawdesley, L.D. Gatward, J. Boulanger, U. Schulze, A. Šarić, B. Baum, Proceedings of the National Academy of Sciences 122 (2025) e2513939122.","apa":"Parham, J., Sorichetti, V., Cezanne, A., Foo, S., Kuo, Y. W., Hoogenberg, B., … Baum, B. (2025). Temporal and spatial coordination of DNA segregation and cell division in an archaeon. <i>Proceedings of the National Academy of Sciences</i>. National Academy of Sciences. <a href=\"https://doi.org/10.1073/pnas.2513939122\">https://doi.org/10.1073/pnas.2513939122</a>","ama":"Parham J, Sorichetti V, Cezanne A, et al. Temporal and spatial coordination of DNA segregation and cell division in an archaeon. <i>Proceedings of the National Academy of Sciences</i>. 2025;122(42):e2513939122. doi:<a href=\"https://doi.org/10.1073/pnas.2513939122\">10.1073/pnas.2513939122</a>"},"publication_status":"published","status":"public","oa":1,"date_published":"2025-10-21T00:00:00Z","ddc":["570"],"title":"Temporal and spatial coordination of DNA segregation and cell division in an archaeon","external_id":{"pmid":["41091768"],"isi":["001620648600001"]},"ec_funded":1,"type":"journal_article","issue":"42","department":[{"_id":"AnSa"}],"quality_controlled":"1","date_updated":"2026-02-16T12:32:31Z","project":[{"call_identifier":"H2020","grant_number":"802960","_id":"eba2549b-77a9-11ec-83b8-a81e493eae4e","name":"Non-Equilibrium Protein Assembly: from Building Blocks to Biological Machines"},{"name":"EMBO Young Investigator Program - Andela Saric","_id":"349b6ff1-11ca-11ed-8bc3-f006047c2eeb"}],"article_type":"original","oa_version":"Published Version","publication_identifier":{"eissn":["1091-6490"]},"PlanS_conform":"1","has_accepted_license":"1","volume":122,"publication":"Proceedings of the National Academy of Sciences","isi":1,"month":"10","file_date_updated":"2025-10-27T08:12:59Z","language":[{"iso":"eng"}]},{"type":"journal_article","issue":"10","external_id":{"isi":["001547542300001"],"pmid":["40668071"]},"title":"Deleterious mutations and selection for sex in spatially structured, diploid populations","date_updated":"2025-12-01T15:03:54Z","project":[{"name":"NOMIS Fellowship Program","_id":"9B861AAC-BA93-11EA-9121-9846C619BF3A"}],"article_type":"original","department":[{"_id":"NiBa"}],"quality_controlled":"1","oa_version":"Preprint","publication_identifier":{"eissn":["1558-5646"]},"language":[{"iso":"eng"}],"volume":79,"isi":1,"month":"10","publication":"Evolution","day":"17","article_processing_charge":"No","abstract":[{"lang":"eng","text":"Genetic drift is potentially an important component of selection for sex, as it is a source of statistical associations between alleles at selected loci. By increasing local drift, population structure may thus amplify the evolutionary advantage of sex. However, most previous models have focused either on haploid populations or on diploid populations without spatial structure. In this article, we use two- and three-locus analytical models and multilocus simulations to explore selection for sex in a diploid population structured according to the island model, in the presence of recurrent deleterious mutations. Our results show that selection generally favors an intermediate rate of sex that decreases as the direct cost of sex increases and increases moderately as the degree of population structure increases. Selection for sex is generated by multiple effects involving genetic associations within and between loci. When selection occurs at many loci, it is generally dominated by interference effects involving deleterious alleles at different loci, captured by our three-locus model. In our multilocus simulations, we observed an irreversible spread of asexual mutants under strong costs of sex, and when deleterious mutations are partially recessive. However, population structure may prevent this spread of asexual mutants when dispersal rates are sufficiently small."}],"year":"2025","page":"2167-2180","scopus_import":"1","OA_type":"green","_id":"20531","acknowledgement":"L.F. is funded by the NOMIS-ISTA Fellowship Program. We thank Colin Olito and two anonymous reviewers for helpful comments, and the bioinformatics and computing services at Roscoff’s Biological Station (Abims platform) and at Institute of Science and Technology Austria for computing time.","intvolume":"        79","author":[{"full_name":"Fouqueau, Louise","last_name":"Fouqueau","orcid":"0000-0003-0371-9339","first_name":"Louise","id":"1676e173-8143-11ed-8927-fe165216a93f"},{"last_name":"Roze","full_name":"Roze, Denis","first_name":"Denis"}],"publisher":"Oxford University Press","date_created":"2025-10-26T23:01:34Z","doi":"10.1093/evolut/qpaf143","pmid":1,"OA_place":"repository","date_published":"2025-10-17T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","main_file_link":[{"url":"https://doi.org/10.1101/2025.01.22.634382","open_access":"1"}],"publication_status":"published","citation":{"short":"L. Fouqueau, D. Roze, Evolution 79 (2025) 2167–2180.","apa":"Fouqueau, L., &#38; Roze, D. (2025). Deleterious mutations and selection for sex in spatially structured, diploid populations. <i>Evolution</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/evolut/qpaf143\">https://doi.org/10.1093/evolut/qpaf143</a>","ama":"Fouqueau L, Roze D. Deleterious mutations and selection for sex in spatially structured, diploid populations. <i>Evolution</i>. 2025;79(10):2167-2180. doi:<a href=\"https://doi.org/10.1093/evolut/qpaf143\">10.1093/evolut/qpaf143</a>","mla":"Fouqueau, Louise, and Denis Roze. “Deleterious Mutations and Selection for Sex in Spatially Structured, Diploid Populations.” <i>Evolution</i>, vol. 79, no. 10, Oxford University Press, 2025, pp. 2167–80, doi:<a href=\"https://doi.org/10.1093/evolut/qpaf143\">10.1093/evolut/qpaf143</a>.","ista":"Fouqueau L, Roze D. 2025. Deleterious mutations and selection for sex in spatially structured, diploid populations. Evolution. 79(10), 2167–2180.","chicago":"Fouqueau, Louise, and Denis Roze. “Deleterious Mutations and Selection for Sex in Spatially Structured, Diploid Populations.” <i>Evolution</i>. Oxford University Press, 2025. <a href=\"https://doi.org/10.1093/evolut/qpaf143\">https://doi.org/10.1093/evolut/qpaf143</a>.","ieee":"L. Fouqueau and D. Roze, “Deleterious mutations and selection for sex in spatially structured, diploid populations,” <i>Evolution</i>, vol. 79, no. 10. Oxford University Press, pp. 2167–2180, 2025."},"status":"public","oa":1},{"publication_identifier":{"eissn":["1095-9203"],"issn":["0036-8075"]},"oa_version":"None","month":"10","publication":"Science","isi":1,"volume":390,"language":[{"iso":"eng"}],"ec_funded":1,"title":"Kiss, shrink, run","external_id":{"pmid":["41100630"],"isi":["001610669900024"]},"issue":"6770","type":"journal_article","quality_controlled":"1","department":[{"_id":"PeJo"}],"date_updated":"2025-12-01T15:04:34Z","article_type":"comment","project":[{"name":"IST-BRIDGE: International postdoctoral program","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","grant_number":"101034413","call_identifier":"H2020"}],"publisher":"AAAS","doi":"10.1126/science.aec0091","pmid":1,"date_created":"2025-10-26T23:01:34Z","intvolume":"       390","author":[{"id":"39302e62-fcfc-11ec-8196-8b01447dbd3d","first_name":"Katharina","full_name":"Lichter, Katharina","last_name":"Lichter","orcid":"0000-0002-1485-0351"}],"publication_status":"published","citation":{"chicago":"Lichter, Katharina. “Kiss, Shrink, Run.” <i>Science</i>. AAAS, 2025. <a href=\"https://doi.org/10.1126/science.aec0091\">https://doi.org/10.1126/science.aec0091</a>.","ieee":"K. Lichter, “Kiss, shrink, run,” <i>Science</i>, vol. 390, no. 6770. AAAS, pp. 236–237, 2025.","ista":"Lichter K. 2025. Kiss, shrink, run. Science. 390(6770), 236–237.","mla":"Lichter, Katharina. “Kiss, Shrink, Run.” <i>Science</i>, vol. 390, no. 6770, AAAS, 2025, pp. 236–37, doi:<a href=\"https://doi.org/10.1126/science.aec0091\">10.1126/science.aec0091</a>.","ama":"Lichter K. Kiss, shrink, run. <i>Science</i>. 2025;390(6770):236-237. doi:<a href=\"https://doi.org/10.1126/science.aec0091\">10.1126/science.aec0091</a>","apa":"Lichter, K. (2025). Kiss, shrink, run. <i>Science</i>. AAAS. <a href=\"https://doi.org/10.1126/science.aec0091\">https://doi.org/10.1126/science.aec0091</a>","short":"K. Lichter, Science 390 (2025) 236–237."},"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","corr_author":"1","date_published":"2025-10-16T00:00:00Z","day":"16","article_processing_charge":"No","acknowledgement":"The author thanks P. Jonas for feedback on the manuscript and acknowledges support from the European Union’s Horizon 2020 research and innovation program under Marie Skłodowska-Curie grant agreement no. 101034413.","scopus_import":"1","OA_type":"closed access","_id":"20532","page":"236-237","abstract":[{"text":"A unified mechanism directs synaptic vesicle release","lang":"eng"}],"year":"2025"},{"publication_identifier":{"isbn":["9783959773959"],"issn":["1868-8969"]},"oa_version":"Published Version","publication":"33rd Annual European Symposium on Algorithms","month":"10","has_accepted_license":"1","volume":351,"language":[{"iso":"eng"}],"file_date_updated":"2025-10-27T07:57:00Z","article_number":"2","conference":{"name":"ESA: European Symposium on Algorithms","location":"Warsaw, Poland","end_date":"2025-09-17","start_date":"2025-09-15"},"ddc":["000"],"title":"Securing dynamic data: A primer on differentially private data structures","type":"conference","quality_controlled":"1","department":[{"_id":"MoHe"}],"alternative_title":["LIPIcs"],"date_updated":"2025-10-27T08:00:13Z","OA_place":"publisher","doi":"10.4230/LIPIcs.ESA.2025.2","date_created":"2025-10-26T23:01:34Z","publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","author":[{"orcid":"0000-0002-5008-6530","last_name":"Henzinger","full_name":"Henzinger, Monika H","id":"540c9bbd-f2de-11ec-812d-d04a5be85630","first_name":"Monika H"},{"last_name":"Safavi Hemami","full_name":"Safavi Hemami, Roodabeh","first_name":"Roodabeh","id":"72ed2640-8972-11ed-ae7b-f9c81ec75154"}],"intvolume":"       351","oa":1,"status":"public","file":[{"content_type":"application/pdf","access_level":"open_access","checksum":"094e0466d90664fbea397b469a60acbb","relation":"main_file","date_created":"2025-10-27T07:57:00Z","success":1,"creator":"dernst","date_updated":"2025-10-27T07:57:00Z","file_id":"20541","file_size":770227,"file_name":"2025_LIPIcs.ESA_Henzinger.pdf"}],"citation":{"ama":"Henzinger M, Safavi Hemami R. Securing dynamic data: A primer on differentially private data structures. In: <i>33rd Annual European Symposium on Algorithms</i>. Vol 351. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2025. doi:<a href=\"https://doi.org/10.4230/LIPIcs.ESA.2025.2\">10.4230/LIPIcs.ESA.2025.2</a>","apa":"Henzinger, M., &#38; Safavi Hemami, R. (2025). Securing dynamic data: A primer on differentially private data structures. In <i>33rd Annual European Symposium on Algorithms</i> (Vol. 351). Warsaw, Poland: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.ESA.2025.2\">https://doi.org/10.4230/LIPIcs.ESA.2025.2</a>","short":"M. Henzinger, R. Safavi Hemami, in:, 33rd Annual European Symposium on Algorithms, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025.","chicago":"Henzinger, Monika, and Roodabeh Safavi Hemami. “Securing Dynamic Data: A Primer on Differentially Private Data Structures.” In <i>33rd Annual European Symposium on Algorithms</i>, Vol. 351. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025. <a href=\"https://doi.org/10.4230/LIPIcs.ESA.2025.2\">https://doi.org/10.4230/LIPIcs.ESA.2025.2</a>.","ieee":"M. Henzinger and R. Safavi Hemami, “Securing dynamic data: A primer on differentially private data structures,” in <i>33rd Annual European Symposium on Algorithms</i>, Warsaw, Poland, 2025, vol. 351.","ista":"Henzinger M, Safavi Hemami R. 2025. Securing dynamic data: A primer on differentially private data structures. 33rd Annual European Symposium on Algorithms. ESA: European Symposium on Algorithms, LIPIcs, vol. 351, 2.","mla":"Henzinger, Monika, and Roodabeh Safavi Hemami. “Securing Dynamic Data: A Primer on Differentially Private Data Structures.” <i>33rd Annual European Symposium on Algorithms</i>, vol. 351, 2, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025, doi:<a href=\"https://doi.org/10.4230/LIPIcs.ESA.2025.2\">10.4230/LIPIcs.ESA.2025.2</a>."},"publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2025-10-01T00:00:00Z","corr_author":"1","day":"01","article_processing_charge":"No","_id":"20533","scopus_import":"1","OA_type":"gold","year":"2025","abstract":[{"text":"We give an introduction into differential privacy in the dynamic setting, called the continual observation setting.","lang":"eng"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"}},{"abstract":[{"lang":"eng","text":"A non-trivial minimum cut (NMC) sparsifier is a multigraph Ĝ that preserves all non-trivial minimum cuts of a given undirected graph G. We introduce a flexible data structure for fully dynamic graphs that can efficiently provide an NMC sparsifier upon request at any point during the sequence of updates. We employ simple dynamic forest data structures to achieve a fast from-scratch construction of the sparsifier at query time. Based on the strength of the adversary and desired type of time bounds, the data structure comes with different guarantees. Specifically, let G be a fully dynamic simple graph with n vertices and minimum degree δ. Then our data structure supports an insertion/deletion of an edge to/from G in n^o(1) worst-case time. Furthermore, upon request, it can return w.h.p. an NMC sparsifier of G that has O(n/δ) vertices and O(n) edges, in Ô(n) time. The probabilistic guarantees hold against an adaptive adversary. Alternatively, the update and query times can be improved to Õ(1) and Õ(n) respectively, if amortized-time guarantees are sufficient, or if the adversary is oblivious. Throughout the paper, we use Õ to hide polylogarithmic factors and Ô to hide subpolynomial (i.e., n^o(1)) factors.\r\nWe discuss two applications of our new data structure. First, it can be used to efficiently report a cactus representation of all minimum cuts of a fully dynamic simple graph. Building this cactus for the NMC sparsifier instead of the original graph allows for a construction time that is sublinear in the number of edges. Against an adaptive adversary, we can with high probability output the cactus representation in worst-case Ô(n) time. Second, our data structure allows us to efficiently compute the maximal k-edge-connected subgraphs of undirected simple graphs, by repeatedly applying a minimum cut algorithm on the NMC sparsifier. Specifically, we can compute with high probability the maximal k-edge-connected subgraphs of a simple graph with n vertices and m edges in Õ(m+n²/k) time. This improves the best known time bounds for k = Ω(n^{1/8}) and naturally extends to the case of fully dynamic graphs."}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"year":"2025","scopus_import":"1","OA_type":"gold","_id":"20534","acknowledgement":"Monika Henzinger and Evangelos Kosinas: This project has received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (MoDynStruct, No. 101019564) and the Austrian Science Fund (FWF) grant https://www.doi.org/10.55776/Z422 and grant https://www.doi.org/10.55776/I5982. Harald Räcke and Robin Münk: This project has received funding from the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – 498605858.","day":"01","article_processing_charge":"No","date_published":"2025-10-01T00:00:00Z","corr_author":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"apa":"Henzinger, M., Kosinas, E., Münk, R., &#38; Räcke, H. (2025). Efficient contractions of dynamic graphs - with applications. In <i>33rd Annual European Symposium on Algorithms</i> (Vol. 351). Warsaw, Poland: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.ESA.2025.36\">https://doi.org/10.4230/LIPIcs.ESA.2025.36</a>","short":"M. Henzinger, E. Kosinas, R. Münk, H. Räcke, in:, 33rd Annual European Symposium on Algorithms, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025.","ama":"Henzinger M, Kosinas E, Münk R, Räcke H. Efficient contractions of dynamic graphs - with applications. In: <i>33rd Annual European Symposium on Algorithms</i>. Vol 351. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2025. doi:<a href=\"https://doi.org/10.4230/LIPIcs.ESA.2025.36\">10.4230/LIPIcs.ESA.2025.36</a>","ieee":"M. Henzinger, E. Kosinas, R. Münk, and H. Räcke, “Efficient contractions of dynamic graphs - with applications,” in <i>33rd Annual European Symposium on Algorithms</i>, Warsaw, Poland, 2025, vol. 351.","chicago":"Henzinger, Monika, Evangelos Kosinas, Robin Münk, and Harald Räcke. “Efficient Contractions of Dynamic Graphs - with Applications.” In <i>33rd Annual European Symposium on Algorithms</i>, Vol. 351. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025. <a href=\"https://doi.org/10.4230/LIPIcs.ESA.2025.36\">https://doi.org/10.4230/LIPIcs.ESA.2025.36</a>.","mla":"Henzinger, Monika, et al. “Efficient Contractions of Dynamic Graphs - with Applications.” <i>33rd Annual European Symposium on Algorithms</i>, vol. 351, 36, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025, doi:<a href=\"https://doi.org/10.4230/LIPIcs.ESA.2025.36\">10.4230/LIPIcs.ESA.2025.36</a>.","ista":"Henzinger M, Kosinas E, Münk R, Räcke H. 2025. Efficient contractions of dynamic graphs - with applications. 33rd Annual European Symposium on Algorithms. ESA: European Symposium on Algorithms vol. 351, 36."},"file":[{"content_type":"application/pdf","relation":"main_file","access_level":"open_access","checksum":"d2daf9a467e96fb5e7084a8a85321776","date_created":"2025-10-27T08:03:36Z","success":1,"creator":"dernst","file_id":"20542","date_updated":"2025-10-27T08:03:36Z","file_size":934846,"file_name":"2025_LIPIcs.ESA_HenzingerM.pdf"}],"publication_status":"published","status":"public","oa":1,"intvolume":"       351","author":[{"id":"540c9bbd-f2de-11ec-812d-d04a5be85630","first_name":"Monika H","orcid":"0000-0002-5008-6530","last_name":"Henzinger","full_name":"Henzinger, Monika H"},{"last_name":"Kosinas","full_name":"Kosinas, Evangelos","id":"4c7f9625-dbbc-11ee-9d86-bdcc2db5a949","first_name":"Evangelos"},{"first_name":"Robin","last_name":"Münk","full_name":"Münk, Robin"},{"last_name":"Räcke","full_name":"Räcke, Harald","first_name":"Harald"}],"publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","date_created":"2025-10-26T23:01:34Z","doi":"10.4230/LIPIcs.ESA.2025.36","OA_place":"publisher","date_updated":"2025-10-27T08:05:46Z","project":[{"grant_number":"101019564","call_identifier":"H2020","name":"The design and evaluation of modern fully dynamic data structures","_id":"bd9ca328-d553-11ed-ba76-dc4f890cfe62"},{"name":"Efficient algorithms","_id":"34def286-11ca-11ed-8bc3-da5948e1613c","grant_number":"Z00422"},{"name":"Static and Dynamic Hierarchical Graph Decompositions","_id":"bda196b2-d553-11ed-ba76-8e8ee6c21103","grant_number":"I05982"}],"quality_controlled":"1","department":[{"_id":"MoHe"}],"type":"conference","conference":{"start_date":"2025-09-15","location":"Warsaw, Poland","end_date":"2025-09-17","name":"ESA: European Symposium on Algorithms"},"title":"Efficient contractions of dynamic graphs - with applications","external_id":{"arxiv":["2509.05157"]},"arxiv":1,"article_number":"36","ddc":["000"],"ec_funded":1,"file_date_updated":"2025-10-27T08:03:36Z","language":[{"iso":"eng"}],"volume":351,"has_accepted_license":"1","publication":"33rd Annual European Symposium on Algorithms","month":"10","oa_version":"Published Version","publication_identifier":{"issn":["1868-8969"],"isbn":["9783959773959"]}},{"quality_controlled":"1","department":[{"_id":"MoHe"}],"date_updated":"2025-10-27T07:02:06Z","project":[{"name":"The design and evaluation of modern fully dynamic data structures","_id":"bd9ca328-d553-11ed-ba76-dc4f890cfe62","call_identifier":"H2020","grant_number":"101019564"},{"grant_number":"Z00422","name":"Efficient algorithms","_id":"34def286-11ca-11ed-8bc3-da5948e1613c"},{"grant_number":"I05982","name":"Static and Dynamic Hierarchical Graph Decompositions","_id":"bda196b2-d553-11ed-ba76-8e8ee6c21103"}],"alternative_title":["LIPIcs"],"ddc":["000"],"title":"Near-optimal differentially private graph algorithms via the Multidimensional AboveThreshold Mechanism","article_number":"91","external_id":{"arxiv":["2508.02182"]},"conference":{"name":"ESA: European Symposium on Algorithms","location":"Warsaw, Poland","start_date":"2025-09-15","end_date":"2025-09-17"},"arxiv":1,"ec_funded":1,"type":"conference","volume":351,"has_accepted_license":"1","month":"10","publication":"33rd Annual European Symposium on Algorithms","file_date_updated":"2025-10-27T06:58:43Z","language":[{"iso":"eng"}],"oa_version":"Published Version","publication_identifier":{"isbn":["9783959773959"],"issn":["1868-8969"]},"scopus_import":"1","OA_type":"gold","_id":"20535","acknowledgement":"Monika Henzinger and A. R. Sricharan: This project has received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation\r\nprogramme (MoDynStruct, No. 101019564) and the Austrian Science Fund (FWF) grant DOI\r\n10.55776/Z422 and grant DOI 10.55776/I5982. Laxman Dhulipala and George Z. Li: supported by NSF award number CNS-2317194. Quanquan C. Liu: supported by a Google Academic Research Award and by an NSF award number CCF-2453323.","abstract":[{"text":"Many differentially private and classical non-private graph algorithms rely crucially on determining whether some property of each vertex meets a threshold. For example, for the k-core decomposition problem, the classic peeling algorithm iteratively removes a vertex if its induced degree falls below a threshold. The sparse vector technique (SVT) is generally used to transform non-private threshold queries into private ones with only a small additive loss in accuracy. However, a naive application of SVT in the graph setting leads to an amplification of the error by a factor of n due to composition, as SVT is applied to every vertex. In this paper, we resolve this problem by formulating a novel generalized sparse vector technique which we call the Multidimensional AboveThreshold (MAT) Mechanism which generalizes SVT (applied to vectors with one dimension) to vectors with multiple dimensions. When applied to vectors with n dimensions, we solve a number of important graph problems with better bounds than previous work.\r\nSpecifically, we apply our MAT mechanism to obtain a set of improved bounds for a variety of problems including k-core decomposition, densest subgraph, low out-degree ordering, and vertex coloring. We give a tight local edge differentially private (LEDP) algorithm for k-core decomposition that results in an approximation with O(ε^{-1} log n) additive error and no multiplicative error in O(n) rounds. We also give a new (2+η)-factor multiplicative, O(ε^{-1} log n) additive error algorithm in O(log² n) rounds for any constant η > 0. Both of these results are asymptotically tight against our new lower bound of Ω(log n) for any constant-factor approximation algorithm for k-core decomposition. Our new algorithms for k-core decomposition also directly lead to new algorithms for the related problems of densest subgraph and low out-degree ordering. Finally, we give novel LEDP differentially private defective coloring algorithms that use number of colors given in terms of the arboricity of the graph.","lang":"eng"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"year":"2025","article_processing_charge":"No","day":"01","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file":[{"date_created":"2025-10-27T06:58:43Z","creator":"dernst","success":1,"content_type":"application/pdf","access_level":"open_access","checksum":"19146e935b5b6ad5d33c8d08280ad8e7","relation":"main_file","file_name":"2025_LIPIcs.ESA_Dhulipala.pdf","file_size":870317,"date_updated":"2025-10-27T06:58:43Z","file_id":"20539"}],"publication_status":"published","citation":{"apa":"Dhulipala, L., Henzinger, M., Li, G. Z., Liu, Q. C., Sricharan, A. R., &#38; Zhu, L. (2025). Near-optimal differentially private graph algorithms via the Multidimensional AboveThreshold Mechanism. In <i>33rd Annual European Symposium on Algorithms</i> (Vol. 351). Warsaw, Poland: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.ESA.2025.91\">https://doi.org/10.4230/LIPIcs.ESA.2025.91</a>","short":"L. Dhulipala, M. Henzinger, G.Z. Li, Q.C. Liu, A.R. Sricharan, L. Zhu, in:, 33rd Annual European Symposium on Algorithms, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025.","ama":"Dhulipala L, Henzinger M, Li GZ, Liu QC, Sricharan AR, Zhu L. Near-optimal differentially private graph algorithms via the Multidimensional AboveThreshold Mechanism. In: <i>33rd Annual European Symposium on Algorithms</i>. Vol 351. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2025. doi:<a href=\"https://doi.org/10.4230/LIPIcs.ESA.2025.91\">10.4230/LIPIcs.ESA.2025.91</a>","mla":"Dhulipala, Laxman, et al. “Near-Optimal Differentially Private Graph Algorithms via the Multidimensional AboveThreshold Mechanism.” <i>33rd Annual European Symposium on Algorithms</i>, vol. 351, 91, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025, doi:<a href=\"https://doi.org/10.4230/LIPIcs.ESA.2025.91\">10.4230/LIPIcs.ESA.2025.91</a>.","ista":"Dhulipala L, Henzinger M, Li GZ, Liu QC, Sricharan AR, Zhu L. 2025. Near-optimal differentially private graph algorithms via the Multidimensional AboveThreshold Mechanism. 33rd Annual European Symposium on Algorithms. ESA: European Symposium on Algorithms, LIPIcs, vol. 351, 91.","chicago":"Dhulipala, Laxman, Monika Henzinger, George Z. Li, Quanquan C. Liu, A. R. Sricharan, and Leqi Zhu. “Near-Optimal Differentially Private Graph Algorithms via the Multidimensional AboveThreshold Mechanism.” In <i>33rd Annual European Symposium on Algorithms</i>, Vol. 351. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025. <a href=\"https://doi.org/10.4230/LIPIcs.ESA.2025.91\">https://doi.org/10.4230/LIPIcs.ESA.2025.91</a>.","ieee":"L. Dhulipala, M. Henzinger, G. Z. Li, Q. C. Liu, A. R. Sricharan, and L. Zhu, “Near-optimal differentially private graph algorithms via the Multidimensional AboveThreshold Mechanism,” in <i>33rd Annual European Symposium on Algorithms</i>, Warsaw, Poland, 2025, vol. 351."},"status":"public","oa":1,"corr_author":"1","date_published":"2025-10-01T00:00:00Z","OA_place":"publisher","intvolume":"       351","author":[{"first_name":"Laxman","full_name":"Dhulipala, Laxman","last_name":"Dhulipala"},{"first_name":"Monika H","id":"540c9bbd-f2de-11ec-812d-d04a5be85630","full_name":"Henzinger, Monika H","orcid":"0000-0002-5008-6530","last_name":"Henzinger"},{"first_name":"George Z.","last_name":"Li","full_name":"Li, George Z."},{"first_name":"Quanquan C.","full_name":"Liu, Quanquan C.","last_name":"Liu"},{"last_name":"Sricharan","full_name":"Sricharan, A. R.","first_name":"A. R."},{"last_name":"Zhu","full_name":"Zhu, Leqi","first_name":"Leqi","id":"a2117c59-cee4-11ed-b9d0-874ecf0f8ac5"}],"publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","doi":"10.4230/LIPIcs.ESA.2025.91","date_created":"2025-10-26T23:01:35Z"},{"date_published":"2025-08-29T00:00:00Z","corr_author":"1","oa":1,"status":"public","file":[{"file_size":1081870,"file_name":"2025_LIPIcs.WADS_Safavi.pdf","file_id":"20540","date_updated":"2025-10-27T07:09:41Z","content_type":"application/pdf","checksum":"196af33762831a78e87f4f95ecd8677b","relation":"main_file","access_level":"open_access","date_created":"2025-10-27T07:09:41Z","success":1,"creator":"dernst"}],"publication_status":"published","citation":{"short":"R. Safavi Hemami, M.P. Seybold, in:, 19th International Symposium on Algorithms and Data Structures, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025.","apa":"Safavi Hemami, R., &#38; Seybold, M. P. (2025). B-Treaps revised: Write efficient randomized block search trees with high load. In <i>19th International Symposium on Algorithms and Data Structures</i> (Vol. 349). Toronto, Canada: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.WADS.2025.47\">https://doi.org/10.4230/LIPIcs.WADS.2025.47</a>","ama":"Safavi Hemami R, Seybold MP. B-Treaps revised: Write efficient randomized block search trees with high load. In: <i>19th International Symposium on Algorithms and Data Structures</i>. Vol 349. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2025. doi:<a href=\"https://doi.org/10.4230/LIPIcs.WADS.2025.47\">10.4230/LIPIcs.WADS.2025.47</a>","chicago":"Safavi Hemami, Roodabeh, and Martin P. Seybold. “B-Treaps Revised: Write Efficient Randomized Block Search Trees with High Load.” In <i>19th International Symposium on Algorithms and Data Structures</i>, Vol. 349. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025. <a href=\"https://doi.org/10.4230/LIPIcs.WADS.2025.47\">https://doi.org/10.4230/LIPIcs.WADS.2025.47</a>.","ieee":"R. Safavi Hemami and M. P. Seybold, “B-Treaps revised: Write efficient randomized block search trees with high load,” in <i>19th International Symposium on Algorithms and Data Structures</i>, Toronto, Canada, 2025, vol. 349.","ista":"Safavi Hemami R, Seybold MP. 2025. B-Treaps revised: Write efficient randomized block search trees with high load. 19th International Symposium on Algorithms and Data Structures. WADS: Algorithms and Data Structures Symposium, LIPIcs, vol. 349, 47.","mla":"Safavi Hemami, Roodabeh, and Martin P. Seybold. “B-Treaps Revised: Write Efficient Randomized Block Search Trees with High Load.” <i>19th International Symposium on Algorithms and Data Structures</i>, vol. 349, 47, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025, doi:<a href=\"https://doi.org/10.4230/LIPIcs.WADS.2025.47\">10.4230/LIPIcs.WADS.2025.47</a>."},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","doi":"10.4230/LIPIcs.WADS.2025.47","date_created":"2025-10-26T23:01:35Z","publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","author":[{"first_name":"Roodabeh","id":"72ed2640-8972-11ed-ae7b-f9c81ec75154","last_name":"Safavi Hemami","full_name":"Safavi Hemami, Roodabeh"},{"last_name":"Seybold","full_name":"Seybold, Martin P.","first_name":"Martin P."}],"intvolume":"       349","OA_place":"publisher","year":"2025","abstract":[{"lang":"eng","text":"Uniquely represented (UR) data structures represent each logical state with a unique storage state. We study the problem of maintaining a dynamic set of n keys from a totally ordered universe in this context. UR structures are also called \"strongly history independent\" structures in the literature.\r\nWe introduce a two-layer data structure called (α,ε)-Randomized Block Search Tree (RBST) that is uniquely represented and suitable for external memory (EM). Though RBSTs naturally generalize the well-known binary Treaps, several new ideas are needed to analyze the expected search, update, and storage efficiency in terms of block-reads, block-writes, and blocks stored. We prove that searches have O(ε^{-1} + log_α n) block-reads, that dynamic updates perform O(ε^{-1} + log_α(n)/α) block-writes and O(ε^{-2}+(1+(ε^{-1}+log n)/α)log_α n) block-reads, and that (α, ε)-RBSTs have an asymptotic load-factor of at least (1-ε) for every ε ∈ (0,1/2].\r\nThus (α, ε)-RBSTs improve on the known, uniquely represented B-Treap [Golovin; ICALP'09]. Compared with non-UR structures, the RBST is also, to the best of our knowledge, the first external memory structure that is storage-efficient and has a non-amortized, write-efficient update bound."}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"acknowledgement":"This work was supported under the Australian Research Council Discovery Projects\r\nfunding scheme (project number DP180102870). This project has received funding from the\r\nEuropean Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (Grant agreement No. 101019564) “The Design of Modern Fully Dynamic Data Structures (MoDynStruct)” and from the Austrian Science Fund (FWF) project Z 422-N and project “Fast Algorithms for a Reactive Network Layer (ReactNet)” P 33775-N, with additional funding from the netidee SCIENCE Stiftung, 2020–2024.","_id":"20536","scopus_import":"1","OA_type":"gold","article_processing_charge":"No","day":"29","language":[{"iso":"eng"}],"file_date_updated":"2025-10-27T07:09:41Z","publication":"19th International Symposium on Algorithms and Data Structures","month":"08","volume":349,"has_accepted_license":"1","publication_identifier":{"issn":["1868-8969"],"isbn":["9783959773980"]},"oa_version":"Published Version","alternative_title":["LIPIcs"],"project":[{"grant_number":"101019564","call_identifier":"H2020","name":"The design and evaluation of modern fully dynamic data structures","_id":"bd9ca328-d553-11ed-ba76-dc4f890cfe62"},{"grant_number":"Z00422","_id":"34def286-11ca-11ed-8bc3-da5948e1613c","name":"Efficient algorithms"},{"name":"Fast Algorithms for a Reactive Network Layer","_id":"bd9e3a2e-d553-11ed-ba76-8aa684ce17fe","grant_number":"P33775"}],"date_updated":"2025-10-27T07:10:49Z","quality_controlled":"1","department":[{"_id":"MoHe"}],"type":"conference","ec_funded":1,"article_number":"47","arxiv":1,"external_id":{"arxiv":["2303.04722"]},"title":"B-Treaps revised: Write efficient randomized block search trees with high load","conference":{"start_date":"2025-08-11","end_date":"2025-08-15","location":"Toronto, Canada","name":"WADS: Algorithms and Data Structures Symposium"},"ddc":["000"]},{"OA_place":"publisher","acknowledged_ssus":[{"_id":"NMR"},{"_id":"LifeSc"}],"doi":"10.1016/j.jmb.2025.169465","pmid":1,"date_created":"2025-10-26T23:01:35Z","publisher":"Elsevier","author":[{"full_name":"Knödlstorfer, Sonja","last_name":"Knödlstorfer","first_name":"Sonja"},{"first_name":"Giorgia","id":"334a5e40-8747-11f0-b671-ba1f5154b4b4","last_name":"Toscano","full_name":"Toscano, Giorgia"},{"full_name":"Ptaszek, Aleksandra L.","last_name":"Ptaszek","first_name":"Aleksandra L."},{"last_name":"Kontaxis","full_name":"Kontaxis, Georg","first_name":"Georg"},{"id":"d42e08e7-f4fc-11eb-af0a-d71e26138f1b","first_name":"Federico","last_name":"Napoli","orcid":"0000-0002-9043-136X","full_name":"Napoli, Federico"},{"last_name":"Schneider","full_name":"Schneider, Jakob","id":"64368429-eb97-11eb-a6c2-c980b1f44415","first_name":"Jakob"},{"last_name":"Maier","full_name":"Maier, Katharina","first_name":"Katharina"},{"full_name":"Kapitonova, Anna","last_name":"Kapitonova","id":"9fb2a840-89e1-11ee-a8b7-cc5c7ba62471","first_name":"Anna"},{"first_name":"Roman J.","last_name":"Lichtenecker","full_name":"Lichtenecker, Roman J."},{"full_name":"Schanda, Paul","orcid":"0000-0002-9350-7606","last_name":"Schanda","id":"7B541462-FAF6-11E9-A490-E8DFE5697425","first_name":"Paul"},{"first_name":"Robert","full_name":"Konrat, Robert","last_name":"Konrat"}],"intvolume":"       437","status":"public","oa":1,"file":[{"date_created":"2025-12-30T10:29:08Z","creator":"dernst","success":1,"content_type":"application/pdf","access_level":"open_access","relation":"main_file","checksum":"feb92f9c79032c261165f4ca573f444a","file_id":"20915","date_updated":"2025-12-30T10:29:08Z","file_name":"2025_JourMolecularBiology_Knoedlstorfer.pdf","file_size":3076611}],"citation":{"ista":"Knödlstorfer S, Toscano G, Ptaszek AL, Kontaxis G, Napoli F, Schneider J, Maier K, Kapitonova A, Lichtenecker RJ, Schanda P, Konrat R. 2025. A novel HMBC-CC-HMQC NMR strategy for methyl assignment using triple-13C-labeled α-ketoisovalerate integrated with UCBShift 2.0. Journal of Molecular Biology. 437(23), 169465.","mla":"Knödlstorfer, Sonja, et al. “A Novel HMBC-CC-HMQC NMR Strategy for Methyl Assignment Using Triple-13C-Labeled α-Ketoisovalerate Integrated with UCBShift 2.0.” <i>Journal of Molecular Biology</i>, vol. 437, no. 23, 169465, Elsevier, 2025, doi:<a href=\"https://doi.org/10.1016/j.jmb.2025.169465\">10.1016/j.jmb.2025.169465</a>.","chicago":"Knödlstorfer, Sonja, Giorgia Toscano, Aleksandra L. Ptaszek, Georg Kontaxis, Federico Napoli, Jakob Schneider, Katharina Maier, et al. “A Novel HMBC-CC-HMQC NMR Strategy for Methyl Assignment Using Triple-13C-Labeled α-Ketoisovalerate Integrated with UCBShift 2.0.” <i>Journal of Molecular Biology</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.jmb.2025.169465\">https://doi.org/10.1016/j.jmb.2025.169465</a>.","ieee":"S. Knödlstorfer <i>et al.</i>, “A novel HMBC-CC-HMQC NMR strategy for methyl assignment using triple-13C-labeled α-ketoisovalerate integrated with UCBShift 2.0,” <i>Journal of Molecular Biology</i>, vol. 437, no. 23. Elsevier, 2025.","apa":"Knödlstorfer, S., Toscano, G., Ptaszek, A. L., Kontaxis, G., Napoli, F., Schneider, J., … Konrat, R. (2025). A novel HMBC-CC-HMQC NMR strategy for methyl assignment using triple-13C-labeled α-ketoisovalerate integrated with UCBShift 2.0. <i>Journal of Molecular Biology</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jmb.2025.169465\">https://doi.org/10.1016/j.jmb.2025.169465</a>","short":"S. Knödlstorfer, G. Toscano, A.L. Ptaszek, G. Kontaxis, F. Napoli, J. Schneider, K. Maier, A. Kapitonova, R.J. Lichtenecker, P. Schanda, R. Konrat, Journal of Molecular Biology 437 (2025).","ama":"Knödlstorfer S, Toscano G, Ptaszek AL, et al. A novel HMBC-CC-HMQC NMR strategy for methyl assignment using triple-13C-labeled α-ketoisovalerate integrated with UCBShift 2.0. <i>Journal of Molecular Biology</i>. 2025;437(23). doi:<a href=\"https://doi.org/10.1016/j.jmb.2025.169465\">10.1016/j.jmb.2025.169465</a>"},"publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2025-12-01T00:00:00Z","day":"01","article_processing_charge":"Yes (in subscription journal)","acknowledgement":"A.L.P and G.T were funded by the “New Ideas” program by Vienna Doctoral School in Chemistry. S.K. was funded by the Austrian Science Fund FWF P35098-B. This work was supported financially by the Austrian Science Fund (FWF, grant numbers I06223 and I5812-B, “AlloSpace”). This research was supported by the Scientific Service Units (SSU) of Institute of Science and Technology Austria (ISTA) through resources provided by the Nuclear Magnetic Resonance Facility and the Lab Support Facility (LSF). We thank Celina Sailer for assistance with the analysis of the NMR spectrum of HsTom70.","_id":"20538","scopus_import":"1","OA_type":"hybrid","year":"2025","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"abstract":[{"lang":"eng","text":"In this study, we describe an integrated approach for methyl group assignment comprising precursor-based selective methyl group labeling, a novel pulse sequence for methyl to backbone coherence transfer and chemical shift predictions using UCBShift 2.0. The utility of this novel α-ketoacid isotopologue is shown by the adaptation of an HMBC-HMQC pulse sequence that simultaneously connects geminal methyl groups of leucine and valine residues to each other and to the protein backbone. By additional 13C,2H-labeling of residues other than valine and leucine residues of the protein, important chemical shift information about neighboring residues (following valine and leucine residues) can be achieved. Thus, different valine and leucine residues in a protein can be characterized as a specific chemical shift vector. Frequency matching with predicted chemical shifts via UCBShift 2.0 using experimental data taken from a subset of the BMRB database revealed a correct assignment performance of about 90%. With applications to proteins of 60.2 kDa and 134 kDa (4 × 33.5 kDa) in size, we demonstrate that the approach provides valuable information even for very large proteins."}],"PlanS_conform":"1","publication_identifier":{"issn":["0022-2836"],"eissn":["1089-8638"]},"oa_version":"Published Version","publication":"Journal of Molecular Biology","month":"12","has_accepted_license":"1","volume":437,"language":[{"iso":"eng"}],"file_date_updated":"2025-12-30T10:29:08Z","title":"A novel HMBC-CC-HMQC NMR strategy for methyl assignment using triple-13C-labeled α-ketoisovalerate integrated with UCBShift 2.0","ddc":["540"],"article_number":"169465","external_id":{"pmid":["41016549"]},"issue":"23","type":"journal_article","department":[{"_id":"PaSc"},{"_id":"GradSch"}],"quality_controlled":"1","article_type":"original","project":[{"grant_number":"I06223","_id":"bdb9578d-d553-11ed-ba76-ed5d39fce6f0","name":"Structure and mechanism of the mitochondrial MIM insertase"},{"name":"AlloSpace. The emergence and mechanisms of allostery","_id":"eb9c82eb-77a9-11ec-83b8-aadd536561cf","grant_number":"I05812"}],"date_updated":"2025-12-30T10:29:20Z"},{"doi":"10.1051/0004-6361/202555816","date_created":"2025-10-27T08:17:26Z","publisher":"EDP Sciences","author":[{"first_name":"Raphael E.","full_name":"Hviding, Raphael E.","last_name":"Hviding"},{"first_name":"Anna","last_name":"de Graaff","full_name":"de Graaff, Anna"},{"first_name":"Tim B.","last_name":"Miller","full_name":"Miller, Tim B."},{"last_name":"Setton","full_name":"Setton, David J.","first_name":"David J."},{"full_name":"Greene, Jenny E.","last_name":"Greene","first_name":"Jenny E."},{"first_name":"Ivo","last_name":"Labbé","full_name":"Labbé, Ivo"},{"first_name":"Gabriel","full_name":"Brammer, Gabriel","last_name":"Brammer"},{"full_name":"Bezanson, Rachel","last_name":"Bezanson","first_name":"Rachel"},{"first_name":"Leindert A.","last_name":"Boogaard","full_name":"Boogaard, Leindert A."},{"first_name":"Nikko J.","full_name":"Cleri, Nikko J.","last_name":"Cleri"},{"first_name":"Joel","last_name":"Leja","full_name":"Leja, Joel"},{"first_name":"Michael V.","full_name":"Maseda, Michael V.","last_name":"Maseda"},{"full_name":"McConachie, Ian","last_name":"McConachie","first_name":"Ian"},{"orcid":"0000-0003-2871-127X","last_name":"Matthee","full_name":"Matthee, Jorryt J","first_name":"Jorryt J","id":"7439a258-f3c0-11ec-9501-9df22fe06720"},{"last_name":"Naidu","full_name":"Naidu, Rohan P.","first_name":"Rohan P."},{"last_name":"Oesch","full_name":"Oesch, Pascal A.","first_name":"Pascal A."},{"first_name":"Bingjie","full_name":"Wang, Bingjie","last_name":"Wang"},{"first_name":"Katherine E.","full_name":"Whitaker, Katherine E.","last_name":"Whitaker"},{"first_name":"Christina C.","last_name":"Williams","full_name":"Williams, Christina C."}],"intvolume":"       702","OA_place":"publisher","date_published":"2025-10-01T00:00:00Z","status":"public","oa":1,"file":[{"access_level":"open_access","checksum":"34d6612d80f3f0e79a8f8ac33d9286ae","relation":"main_file","content_type":"application/pdf","success":1,"creator":"dernst","date_created":"2025-10-27T09:16:23Z","file_size":3885322,"file_name":"2025_AstronomyAstrophysics_Hviding.pdf","date_updated":"2025-10-27T09:16:23Z","file_id":"20550"}],"publication_status":"published","citation":{"apa":"Hviding, R. E., de Graaff, A., Miller, T. B., Setton, D. J., Greene, J. E., Labbé, I., … Williams, C. C. (2025). RUBIES: A spectroscopic census of little red dots. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a href=\"https://doi.org/10.1051/0004-6361/202555816\">https://doi.org/10.1051/0004-6361/202555816</a>","ama":"Hviding RE, de Graaff A, Miller TB, et al. RUBIES: A spectroscopic census of little red dots. <i>Astronomy &#38; Astrophysics</i>. 2025;702. doi:<a href=\"https://doi.org/10.1051/0004-6361/202555816\">10.1051/0004-6361/202555816</a>","short":"R.E. Hviding, A. de Graaff, T.B. Miller, D.J. Setton, J.E. Greene, I. Labbé, G. Brammer, R. Bezanson, L.A. Boogaard, N.J. Cleri, J. Leja, M.V. Maseda, I. McConachie, J.J. Matthee, R.P. Naidu, P.A. Oesch, B. Wang, K.E. Whitaker, C.C. Williams, Astronomy &#38; Astrophysics 702 (2025).","mla":"Hviding, Raphael E., et al. “RUBIES: A Spectroscopic Census of Little Red Dots.” <i>Astronomy &#38; Astrophysics</i>, vol. 702, A57, EDP Sciences, 2025, doi:<a href=\"https://doi.org/10.1051/0004-6361/202555816\">10.1051/0004-6361/202555816</a>.","ista":"Hviding RE, de Graaff A, Miller TB, Setton DJ, Greene JE, Labbé I, Brammer G, Bezanson R, Boogaard LA, Cleri NJ, Leja J, Maseda MV, McConachie I, Matthee JJ, Naidu RP, Oesch PA, Wang B, Whitaker KE, Williams CC. 2025. RUBIES: A spectroscopic census of little red dots. Astronomy &#38; Astrophysics. 702, A57.","ieee":"R. E. Hviding <i>et al.</i>, “RUBIES: A spectroscopic census of little red dots,” <i>Astronomy &#38; Astrophysics</i>, vol. 702. EDP Sciences, 2025.","chicago":"Hviding, Raphael E., Anna de Graaff, Tim B. Miller, David J. Setton, Jenny E. Greene, Ivo Labbé, Gabriel Brammer, et al. “RUBIES: A Spectroscopic Census of Little Red Dots.” <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2025. <a href=\"https://doi.org/10.1051/0004-6361/202555816\">https://doi.org/10.1051/0004-6361/202555816</a>."},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"Yes (via OA deal)","day":"01","year":"2025","abstract":[{"lang":"eng","text":"The physical nature of little red dots (LRDs), a population of compact red galaxies revealed by JWST, remains unclear. Photometric samples were constructed from varying selection criteria with limited spectroscopic follow-up available to test intrinsic spectral shapes and the prevalence of broad emission lines. We used the RUBIES survey, a large spectroscopic program with wide color-morphology coverage and homogeneous data quality, to systematically analyze the emission-line kinematics, spectral shapes, and morphologies of ∼1500 galaxies at <jats:italic>z</jats:italic> &gt; 3.1. We identified broad Balmer lines via a novel fitting approach that simultaneously models NIRSpec/PRISM and G395M spectra, yielding 80 broad-line sources with 28 (35%) at <jats:italic>z</jats:italic> &gt; 6. A large subpopulation naturally emerged from the broad Balmer line sources, with 36 exhibiting v-shaped UV-to-optical continua and a dominant point source component in the rest-optical; we define these as spectroscopic LRDs, constituting the largest such sample to date. Strikingly, the spectroscopic LRD population is largely recovered when either a broad line or rest-optical point source is required in combination with a v-shaped continuum, suggesting an inherent link between these three defining characteristics. We compared the spectroscopic LRD sample to published photometric searches. Although these selections have high accuracy, 80%−95% down to F444W < 26.5, only 50%−80% of the RUBIES LRDs were photometrically identified, depending on the selection criteria used. The remainder were missed due to a mixture of faint rest-UV photometry, comparatively blue rest-optical colors, or highly uncertain photometric redshifts. Our findings highlight that well-selected spectroscopic campaigns are essential for robust LRD identification, while photometric criteria require refinement to capture the full population."}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"acknowledgement":"Open access funding provided by Max Planck Society. We would like to thank the anonymous reviewer for their constructive comments which improved the final manuscript. REH acknowledges support by the German Aerospace Center (DLR) and the Federal Ministry for Economic Affairs and Energy (BMWi) through program 50OR2403 ‘RUBIES’. TBM was supported by a CIERA Postdoctoral Fellowship. This work used computing resources provided by Northwestern University and the Center for Interdisciplinary Exploration and Research in Astrophysics (CIERA). This research was supported in part through the computational resources and staff contributions provided for the Quest high performance computing facility at Northwestern University which is jointly supported by the Office of the Provost, the Office for Research, and Northwestern University Information Technology. Support for this work was provided by The Brinson Foundation through a Brinson Prize Fellowship grant. The Cosmic Dawn Center is funded by the Danish National Research Foundation (DNRF) under grant #140. This work has received funding from the Swiss State Secretariat for Education, Research and Innovation (SERI) under contract number MB22.00072, as well as from the Swiss National Science Foundation (SNSF) through project grant 200020_207349. Support for this work for RPN was provided by NASA through the NASA Hubble Fellowship grant HST-HF2-51515.001-A awarded by the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Incorporated, under NASA contract NAS5-26555. The work of CCW is supported by NOIRLab, which is managed by the Association of Universities for Research in Astronomy (AURA) under a cooperative agreement with the National Science Foundation. The data products presented herein were retrieved from the Dawn JWST Archive (DJA). DJA is an initiative of the Cosmic Dawn Center (DAWN). This work is based in part on observations made with the NASA/ESA/CSA James Webb Space Telescope. The data were obtained from the Mikulski Archive for Space Telescopes at the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-03127 for JWST. These observations are associated with programs numbers 1345, 1837, 2234, 2279, 2514, 2750, 3990 and 4233. Support for program no. 4233 was provided by NASA through a grant from the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-03127. The authors acknowledge the CEERS, PRIMER, PANORAMIC, and BEACONS teams for developing their observing program with a zero-exclusive-access period. We acknowledge the use of the following software packages which were instrumental in the development of this work: Astropy Astropy Collaboration 2013, 2018, 2022, grizli Brammer 2023a, jax Bradbury et al. 2018, jwst Bushouse et al. 2022, LaTeX Lamport 1994, MatplotlibHunter 2007, msaexp Brammer 2023b, msafit de Graaff et al. 2024, NumPy Oliphant 2006; van der Walt et al. 2011; Harris et al. 2020, NumPyro Phan et al. 2019, photutils Bradley et al. 2024b, pysersic Pasha & Miller 2023, photutils Bradley et al. 2024a, sedpy Johnson 2021, Source-Extractor Bertin & Arnouts 1996, and unite Hviding 2025. This work makes use of color palettes created by Martin Krzywinski designed for colorblindness. The color palettes and more information can be found at http://mkweb.bcgsc.ca/colorblind/","_id":"20544","scopus_import":"1","OA_type":"hybrid","PlanS_conform":"1","publication_identifier":{"issn":["0004-6361"],"eissn":["1432-0746"]},"oa_version":"Published Version","language":[{"iso":"eng"}],"file_date_updated":"2025-10-27T09:16:23Z","related_material":{"link":[{"url":"https://doi.org/10.1051/0004-6361/202659153e","relation":"erratum"}]},"isi":1,"publication":"Astronomy & Astrophysics","month":"10","volume":702,"has_accepted_license":"1","type":"journal_article","title":"RUBIES: A spectroscopic census of little red dots","external_id":{"isi":["001589731300022"]},"article_number":"A57","ddc":["520"],"article_type":"original","date_updated":"2026-03-02T09:17:21Z","department":[{"_id":"JoMa"}],"quality_controlled":"1"},{"OA_place":"publisher","publisher":"Oxford University Press","doi":"10.1093/mnras/staf1622","date_created":"2025-10-27T08:18:07Z","intvolume":"       543","author":[{"first_name":"Fuga","last_name":"Komori","full_name":"Komori, Fuga"},{"first_name":"Akio K","full_name":"Inoue, Akio K","last_name":"Inoue"},{"last_name":"Mawatari","full_name":"Mawatari, Ken","first_name":"Ken"},{"first_name":"Yuma","last_name":"Sugahara","full_name":"Sugahara, Yuma"},{"full_name":"Umehata, Hideki","last_name":"Umehata","first_name":"Hideki"},{"full_name":"Shimakawa, Rhythm","last_name":"Shimakawa","first_name":"Rhythm"},{"first_name":"Satoshi","last_name":"Yamanaka","full_name":"Yamanaka, Satoshi"},{"first_name":"Takuya","last_name":"Hashimoto","full_name":"Hashimoto, Takuya"},{"orcid":"0000-0003-2871-127X","last_name":"Matthee","full_name":"Matthee, Jorryt J","id":"7439a258-f3c0-11ec-9501-9df22fe06720","first_name":"Jorryt J"},{"first_name":"Toru","last_name":"Misawa","full_name":"Misawa, Toru"}],"DOAJ_listed":"1","file":[{"success":1,"creator":"dernst","date_created":"2025-10-27T09:06:51Z","checksum":"d3190e974ce771e96c4c16ee98abb82a","access_level":"open_access","relation":"main_file","content_type":"application/pdf","date_updated":"2025-10-27T09:06:51Z","file_id":"20549","file_name":"2025_MonthlyNoticesRAS_Komori.pdf","file_size":4864160}],"citation":{"apa":"Komori, F., Inoue, A. K., Mawatari, K., Sugahara, Y., Umehata, H., Shimakawa, R., … Misawa, T. (2025). The first direct imaging of the silhouette of a damped Lyman α system along the line-of-sight to a background galaxy. <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/mnras/staf1622\">https://doi.org/10.1093/mnras/staf1622</a>","short":"F. Komori, A.K. Inoue, K. Mawatari, Y. Sugahara, H. Umehata, R. Shimakawa, S. Yamanaka, T. Hashimoto, J.J. Matthee, T. Misawa, Monthly Notices of the Royal Astronomical Society 543 (2025) 2943–2957.","ama":"Komori F, Inoue AK, Mawatari K, et al. The first direct imaging of the silhouette of a damped Lyman α system along the line-of-sight to a background galaxy. <i>Monthly Notices of the Royal Astronomical Society</i>. 2025;543(3):2943-2957. doi:<a href=\"https://doi.org/10.1093/mnras/staf1622\">10.1093/mnras/staf1622</a>","chicago":"Komori, Fuga, Akio K Inoue, Ken Mawatari, Yuma Sugahara, Hideki Umehata, Rhythm Shimakawa, Satoshi Yamanaka, Takuya Hashimoto, Jorryt J Matthee, and Toru Misawa. “The First Direct Imaging of the Silhouette of a Damped Lyman α System along the Line-of-Sight to a Background Galaxy.” <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press, 2025. <a href=\"https://doi.org/10.1093/mnras/staf1622\">https://doi.org/10.1093/mnras/staf1622</a>.","ieee":"F. Komori <i>et al.</i>, “The first direct imaging of the silhouette of a damped Lyman α system along the line-of-sight to a background galaxy,” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 543, no. 3. Oxford University Press, pp. 2943–2957, 2025.","ista":"Komori F, Inoue AK, Mawatari K, Sugahara Y, Umehata H, Shimakawa R, Yamanaka S, Hashimoto T, Matthee JJ, Misawa T. 2025. The first direct imaging of the silhouette of a damped Lyman α system along the line-of-sight to a background galaxy. Monthly Notices of the Royal Astronomical Society. 543(3), 2943–2957.","mla":"Komori, Fuga, et al. “The First Direct Imaging of the Silhouette of a Damped Lyman α System along the Line-of-Sight to a Background Galaxy.” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 543, no. 3, Oxford University Press, 2025, pp. 2943–57, doi:<a href=\"https://doi.org/10.1093/mnras/staf1622\">10.1093/mnras/staf1622</a>."},"publication_status":"published","oa":1,"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2025-09-25T00:00:00Z","day":"25","article_processing_charge":"Yes","acknowledgement":"We thank Seiji Fujimoto for discussions in the early stage of this work. We were supported by JSPS (Japan Society for the Promotion of Science) KAKENHI Grant Numbers 21H04489, 22H04939, 23H00131, 24H00002, 24K17095, 25K01038, and 25K01039. Some of the data presented herein were obtained at Keck Observatory, which is a private 501(c)3 non-profit organization operated as a scientific partnership among the California Institute of Technology,\r\nthe University of California, and the National Aeronautics and Space Administration. The Observatory was made possible by the generous financial support of the W. M. Keck Foundation. The authors wish to recognize and acknowledge the very significant cultural role and reverence that the summit of Maunakea has always had within the Native Hawaiian community. We are most fortunate to have the opportunity to conduct observations from this\r\nmountain. This research made use of MONTAGE. It is funded by the National Science Foundation under Grant Number ACI-1440620, and was previously funded by the National Aeronautics and Space Administration’s Earth Science Technology Office, Computation\r\nTechnologies Project, underCooperative Agreement Number NCC5-626 between NASA and the California Institute of Technology.","scopus_import":"1","OA_type":"gold","_id":"20545","page":"2943-2957","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"abstract":[{"text":"The H i gas distribution in damped Lyman $\\alpha$ absorbers (DLAs) has remained elusive due to the point-source nature of background quasar emission. Observing DLAs against spatially extended background galaxies provides a new method for constraining their size and structure. Using the Keck Cosmic Web Imager, we present the first ‘silhouette’ image of a DLA at $z=3.34$, identified in the spectrum of a background galaxy at $z=3.61$. Although the silhouette remains unresolved due to limited spatial resolution, this represents a successful proof-of-concept for studying DLA morphology using extended background sources. Possible residual emission in the DLA trough suggests an optical depth contrast exceeding $10^7$ in the internal structure, implying a sharp edge or patchy structure. A Lyman $\\alpha$ emitter (LAE) at $z_{\\rm LAE}=3.3433\\pm 0.0005$, consistent with the DLA redshift, is detected at an angular separation of $1{{_{.}^{\\prime\\prime}} }73\\pm 0{{_{.}^{\\prime\\prime}} }28$ ($12.9\\pm 2.1$ kpc). The DLA is surrounded by three galaxies within 140 kpc in projected distance and 500 km s$^{-1}$ in line-of-sight velocity, indicating that it resides in the circumgalactic medium of the LAE or within a galaxy group/protocluster environment. An O i  $\\lambda 1302$ absorption at $z_{\\rm OI}=3.3288\\pm 0.0004$ is also detected along the line of sight. This absorber may trace metal-enriched outflow from the LAE or a gas-rich galaxy exhibiting the highest star formation activity among the surrounding galaxies. Future large spectroscopic surveys of galaxies will expand such a DLA sample, and three-dimensional spectroscopy for it will shed new light on the role of intergalactic dense gas in galaxy formation and evolution.","lang":"eng"}],"year":"2025","PlanS_conform":"1","publication_identifier":{"eissn":["1365-2966"],"issn":["0035-8711"]},"oa_version":"Published Version","publication":"Monthly Notices of the Royal Astronomical Society","isi":1,"month":"09","has_accepted_license":"1","volume":543,"language":[{"iso":"eng"}],"file_date_updated":"2025-10-27T09:06:51Z","ddc":["520"],"external_id":{"isi":["001592326700001"]},"title":"The first direct imaging of the silhouette of a damped Lyman α system along the line-of-sight to a background galaxy","issue":"3","type":"journal_article","quality_controlled":"1","department":[{"_id":"JoMa"}],"date_updated":"2025-12-01T15:07:43Z","article_type":"original"},{"quality_controlled":"1","department":[{"_id":"FrPe"}],"article_type":"original","date_updated":"2025-12-01T15:05:58Z","external_id":{"isi":["001560847000001"]},"title":"DebDaB: A database of supraglacial debris  thickness and physical properties","ddc":["550"],"issue":"8","type":"journal_article","isi":1,"publication":"Earth System Science Data","month":"08","volume":17,"has_accepted_license":"1","language":[{"iso":"eng"}],"related_material":{"record":[{"relation":"research_data","id":"20547","status":"public"}]},"file_date_updated":"2025-10-27T08:38:40Z","PlanS_conform":"1","publication_identifier":{"issn":["1866-3516"]},"oa_version":"Published Version","acknowledgement":"This work was supported by SNF project RENOIR (“Resolving the thickness of debris on Earth’s glaciers and its rate of change”; grant no. 204322). This project received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and\r\ninnovation programme (grant no. 772751; RAVEN: “Rapid mass losses of debris covered glaciers in High Mountain Asia”). The authors acknowledge DCGWG of IACS for setting the stage and bringing together the debris-covered glacier community to focus on broader needs transcending a specific research topic and for starting the Zenodo community on debris-covered glaciers, where this database is hosted. The authors thank Achim A. Beylich (topical editor), Ken\r\nMankoff (chief editor), Morgan Jones (reviewer), and an anonymous reviewer for their  constructive feedback, comments, and discussions on the database and paper.","_id":"20546","scopus_import":"1","OA_type":"gold","page":"4213-4234","year":"2025","abstract":[{"text":"Rocky debris covers around 7.3 % of the global glacier area, influencing ice melt rates and the surface mass balance of glaciers, making the dynamics and hydrology of debris-covered glaciers distinct from those of clean-ice glaciers. Accurate representation of debris in models is challenging, as measurements of the physical properties and thickness of the supraglacial debris layer are scarce. Here, we compile a database of measured and reported bulk physical properties and layer thicknesses of supraglacial debris that we call the supraglacial Debris Database (DebDaB) and that is open to community submissions. The majority of the database (90 %) is compiled from 172 sources in the literature, and the remaining 10 % was previously unpublished. DebDaB contains 8741 data entries for supraglacial debris layer thickness, of which 1770 entries also include sub-debris ablation rates, 179 thermal conductivity of debris, 160 aerodynamic surface roughness length, 79 debris albedo, 59 debris emissivity, and 37 debris porosity. The data are distributed over 84 glaciers in 13 regions in the Global Terrestrial Network for Glaciers. We show regional differences in the distribution of debris thickness measurements in DebDaB and fit simplified Østrem curves to 19 glaciers with sufficient debris thickness and ablation data. The data in DebDaB can be used for energy balance, melt, and surface mass balance studies by incorporating site-specific debris properties or for evaluation of remote sensing estimates of debris thickness and surface roughness. They can also help future field campaigns on debris-covered glaciers by identifying observation gaps. DebDaB's uneven spatial coverage points to sampling biases in community efforts to observe debris-covered glaciers, with some regions (e.g. central Europe and South Asia) well-sampled but others having gaps with prevalent debris (e.g. the Andes and Alaska). Debris thickness measurements are mostly concentrated at lower elevations, leaving higher-elevation debris-covered areas undersampled and suggesting that our knowledge of debris properties might not be representative of all elevations. The aims of DebDaB, as an openly available dataset, are to evolve over time, to be updated, and to add to community submissions as new data on supraglacial properties become available. The data described in this paper can be accessed from Zenodo at https://doi.org/10.5281/zenodo.14224835 (Groeneveld et al., 2025).","lang":"eng"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"article_processing_charge":"Yes","day":"29","status":"public","oa":1,"DOAJ_listed":"1","publication_status":"published","citation":{"apa":"Fontrodona-Bach, A., Groeneveld, L., Miles, E., McCarthy, M., Shaw, T., Melo Velasco, J. V., &#38; Pellicciotti, F. (2025). DebDaB: A database of supraglacial debris  thickness and physical properties. <i>Earth System Science Data</i>. Copernicus Publications. <a href=\"https://doi.org/10.5194/essd-17-4213-2025\">https://doi.org/10.5194/essd-17-4213-2025</a>","ama":"Fontrodona-Bach A, Groeneveld L, Miles E, et al. DebDaB: A database of supraglacial debris  thickness and physical properties. <i>Earth System Science Data</i>. 2025;17(8):4213-4234. doi:<a href=\"https://doi.org/10.5194/essd-17-4213-2025\">10.5194/essd-17-4213-2025</a>","short":"A. Fontrodona-Bach, L. Groeneveld, E. Miles, M. McCarthy, T. Shaw, J.V. Melo Velasco, F. Pellicciotti, Earth System Science Data 17 (2025) 4213–4234.","ista":"Fontrodona-Bach A, Groeneveld L, Miles E, McCarthy M, Shaw T, Melo Velasco JV, Pellicciotti F. 2025. DebDaB: A database of supraglacial debris  thickness and physical properties. Earth System Science Data. 17(8), 4213–4234.","mla":"Fontrodona-Bach, Adrià, et al. “DebDaB: A Database of Supraglacial Debris  Thickness and Physical Properties.” <i>Earth System Science Data</i>, vol. 17, no. 8, Copernicus Publications, 2025, pp. 4213–34, doi:<a href=\"https://doi.org/10.5194/essd-17-4213-2025\">10.5194/essd-17-4213-2025</a>.","chicago":"Fontrodona-Bach, Adrià, Lars Groeneveld, Evan Miles, Michael McCarthy, Thomas Shaw, Juan Vicente Melo Velasco, and Francesca Pellicciotti. “DebDaB: A Database of Supraglacial Debris  Thickness and Physical Properties.” <i>Earth System Science Data</i>. Copernicus Publications, 2025. <a href=\"https://doi.org/10.5194/essd-17-4213-2025\">https://doi.org/10.5194/essd-17-4213-2025</a>.","ieee":"A. Fontrodona-Bach <i>et al.</i>, “DebDaB: A database of supraglacial debris  thickness and physical properties,” <i>Earth System Science Data</i>, vol. 17, no. 8. Copernicus Publications, pp. 4213–4234, 2025."},"file":[{"file_size":3842196,"file_name":"2025_EarthSystemScienceData_FontrodonaBach.pdf","file_id":"20548","date_updated":"2025-10-27T08:38:40Z","content_type":"application/pdf","relation":"main_file","access_level":"open_access","checksum":"f77ebb9825f374134a89e0e6311fe188","date_created":"2025-10-27T08:38:40Z","success":1,"creator":"dernst"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","corr_author":"1","date_published":"2025-08-29T00:00:00Z","OA_place":"publisher","date_created":"2025-10-27T08:21:22Z","doi":"10.5194/essd-17-4213-2025","publisher":"Copernicus Publications","author":[{"full_name":"Fontrodona-Bach, Adrià","last_name":"Fontrodona-Bach","first_name":"Adrià","id":"f06891fd-9f42-11ee-8632-a20971c43046"},{"last_name":"Groeneveld","full_name":"Groeneveld, Lars","first_name":"Lars"},{"first_name":"Evan","full_name":"Miles, Evan","last_name":"Miles"},{"first_name":"Michael","id":"22a2674a-61ce-11ee-94b5-d18813baf16f","full_name":"McCarthy, Michael","last_name":"McCarthy"},{"orcid":"0000-0001-7640-6152","last_name":"Shaw","full_name":"Shaw, Thomas","id":"3caa3f91-1f03-11ee-96ce-e0e553054d6e","first_name":"Thomas"},{"last_name":"Melo Velasco","full_name":"Melo Velasco, Juan Vicente","first_name":"Juan Vicente","id":"2611dec0-b9c6-11ed-9bea-a81c2b17a549"},{"first_name":"Francesca","id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","full_name":"Pellicciotti, Francesca","last_name":"Pellicciotti","orcid":"0000-0002-5554-8087"}],"intvolume":"        17"},{"department":[{"_id":"FrPe"}],"OA_type":"gold","_id":"20547","abstract":[{"lang":"eng","text":"DebdaB is a database of measured and reported physical properties and thickness of supraglacial debris that is openly available and open to community submissions.\r\n\r\nThe majority of the database (90%) is compiled from 172 sources in the literature, and the remaining 10% has not been published before. DebDaB contains 8,286 data entries for supraglacial debris thickness, of which 1,852 entries also include sub-debris ablation rates, 167 data entries of thermal conductivity of debris, 157 of aerodynamic surface roughness length, 77 of debris albedo, 56 of debris emissivity and 37 of debris porosity. The data are distributed over 83 glaciers in 13 regions in the Global Terrestrial Network for Glaciers. "}],"date_updated":"2025-12-01T15:05:58Z","year":"2025","day":"16","article_processing_charge":"No","ddc":["550"],"title":"DebDaB: A database of supraglacial debris thickness and physical properties","type":"research_data_reference","citation":{"apa":"Groeneveld, L., Fontrodona-Bach, A., Miles, E., McCarthy, M., Melo Velasco, J. V., Shaw, T., … Schmid, S. (2025). DebDaB: A database of supraglacial debris thickness and physical properties. Zenodo. <a href=\"https://doi.org/10.5281/ZENODO.14224835\">https://doi.org/10.5281/ZENODO.14224835</a>","short":"L. Groeneveld, A. Fontrodona-Bach, E. Miles, M. McCarthy, J.V. Melo Velasco, T. Shaw, F. Pellicciotti, A. Bauder, P. Buri, M. Kneib, A. Kumar, A. Mishra,  lene Petersen, R. Renner, S. Schmid, (2025).","ama":"Groeneveld L, Fontrodona-Bach A, Miles E, et al. DebDaB: A database of supraglacial debris thickness and physical properties. 2025. doi:<a href=\"https://doi.org/10.5281/ZENODO.14224835\">10.5281/ZENODO.14224835</a>","mla":"Groeneveld, Lars, et al. <i>DebDaB: A Database of Supraglacial Debris Thickness and Physical Properties</i>. Zenodo, 2025, doi:<a href=\"https://doi.org/10.5281/ZENODO.14224835\">10.5281/ZENODO.14224835</a>.","ista":"Groeneveld L, Fontrodona-Bach A, Miles E, McCarthy M, Melo Velasco JV, Shaw T, Pellicciotti F, Bauder A, Buri P, Kneib M, Kumar A, Mishra A, Petersen  lene, Renner R, Schmid S. 2025. DebDaB: A database of supraglacial debris thickness and physical properties, Zenodo, <a href=\"https://doi.org/10.5281/ZENODO.14224835\">10.5281/ZENODO.14224835</a>.","chicago":"Groeneveld, Lars, Adrià Fontrodona-Bach, Evan Miles, Michael McCarthy, Juan Vicente Melo Velasco, Thomas Shaw, Francesca Pellicciotti, et al. “DebDaB: A Database of Supraglacial Debris Thickness and Physical Properties.” Zenodo, 2025. <a href=\"https://doi.org/10.5281/ZENODO.14224835\">https://doi.org/10.5281/ZENODO.14224835</a>.","ieee":"L. Groeneveld <i>et al.</i>, “DebDaB: A database of supraglacial debris thickness and physical properties.” Zenodo, 2025."},"month":"05","oa":1,"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","main_file_link":[{"open_access":"1","url":"https://doi.org/10.5281/zenodo.15441000"}],"date_published":"2025-05-16T00:00:00Z","related_material":{"record":[{"status":"public","id":"20546","relation":"used_in_publication"}]},"OA_place":"repository","publisher":"Zenodo","doi":"10.5281/ZENODO.14224835","date_created":"2025-10-27T08:42:09Z","oa_version":"Published Version","author":[{"full_name":"Groeneveld, Lars","last_name":"Groeneveld","first_name":"Lars"},{"last_name":"Fontrodona-Bach","full_name":"Fontrodona-Bach, Adrià","id":"f06891fd-9f42-11ee-8632-a20971c43046","first_name":"Adrià"},{"first_name":"Evan","full_name":"Miles, Evan","last_name":"Miles"},{"id":"22a2674a-61ce-11ee-94b5-d18813baf16f","first_name":"Michael","last_name":"McCarthy","full_name":"McCarthy, Michael"},{"full_name":"Melo Velasco, Juan Vicente","last_name":"Melo Velasco","id":"2611dec0-b9c6-11ed-9bea-a81c2b17a549","first_name":"Juan Vicente"},{"last_name":"Shaw","orcid":"0000-0001-7640-6152","full_name":"Shaw, Thomas","id":"3caa3f91-1f03-11ee-96ce-e0e553054d6e","first_name":"Thomas"},{"last_name":"Pellicciotti","orcid":"0000-0002-5554-8087","full_name":"Pellicciotti, Francesca","first_name":"Francesca","id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70"},{"first_name":"Andreas","full_name":"Bauder, Andreas","last_name":"Bauder"},{"first_name":"Pascal","full_name":"Buri, Pascal","last_name":"Buri"},{"last_name":"Kneib","full_name":"Kneib, Marin","first_name":"Marin"},{"last_name":"Kumar","full_name":"Kumar, Amit","first_name":"Amit"},{"last_name":"Mishra","full_name":"Mishra, Aditya","first_name":"Aditya"},{"first_name":"lene","last_name":"Petersen","full_name":"Petersen, lene"},{"full_name":"Renner, Roman","last_name":"Renner","first_name":"Roman"},{"first_name":"Sandro","last_name":"Schmid","full_name":"Schmid, Sandro"}]}]