[{"article_type":"original","external_id":{"isi":["001443061400001"],"arxiv":["2312.13061"]},"article_processing_charge":"Yes (via OA deal)","title":"Precoloring extension in planar near-Eulerian-triangulations","date_created":"2025-06-23T13:54:46Z","license":"https://creativecommons.org/licenses/by/4.0/","corr_author":"1","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"relation":"main_file","date_updated":"2025-06-24T06:33:30Z","checksum":"8b3585df45b25091fba9bee9854b7d01","file_name":"2025_EuropJournCombinatorics_Dvorak.pdf","access_level":"open_access","file_size":564203,"content_type":"application/pdf","file_id":"19887","success":1,"date_created":"2025-06-24T06:33:30Z","creator":"dernst"}],"language":[{"iso":"eng"}],"type":"journal_article","_id":"19879","intvolume":"       127","publication_identifier":{"issn":["0195-6698"]},"publisher":"Elsevier","department":[{"_id":"MaKw"}],"author":[{"first_name":"Zdeněk","full_name":"Dvořák, Zdeněk","last_name":"Dvořák"},{"first_name":"Benjamin","full_name":"Moore, Benjamin","last_name":"Moore","id":"6dc1a1be-bf1c-11ed-8d2b-d044840f49d6"},{"full_name":"Seifrtová, Michaela","first_name":"Michaela","last_name":"Seifrtová"},{"last_name":"Šámal","full_name":"Šámal, Robert","first_name":"Robert"}],"quality_controlled":"1","article_number":"104138","date_published":"2025-06-01T00:00:00Z","arxiv":1,"ddc":["510"],"oa":1,"file_date_updated":"2025-06-24T06:33:30Z","isi":1,"publication":"European Journal of Combinatorics","acknowledgement":"Supported by project 22-17398S (Flows and cycles in graphs on surfaces) of Czech Science Foundation. An extended abstract appeared in Proceedings of the 12th European Conference on Combinatorics, Graph Theory and Applications (EUROCOMB’23)","volume":127,"date_updated":"2025-09-30T13:42:59Z","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","scopus_import":"1","day":"01","has_accepted_license":"1","year":"2025","publication_status":"published","OA_place":"publisher","doi":"10.1016/j.ejc.2025.104138","abstract":[{"lang":"eng","text":"We consider the 4-precoloring extension problem in planar near-Eulerian- triangulations, i.e., plane graphs where all faces except possibly for the outer one have length three, all vertices not incident with the outer face have even degree, and exactly the vertices incident with the outer face are precolored. We give a necessary topological condition for the precoloring to extend, and give a complete characterization when the outer face has length at most five and when all vertices of the outer face have odd degree and are colored using only three colors."}],"citation":{"ieee":"Z. Dvořák, B. Moore, M. Seifrtová, and R. Šámal, “Precoloring extension in planar near-Eulerian-triangulations,” <i>European Journal of Combinatorics</i>, vol. 127. Elsevier, 2025.","ama":"Dvořák Z, Moore B, Seifrtová M, Šámal R. Precoloring extension in planar near-Eulerian-triangulations. <i>European Journal of Combinatorics</i>. 2025;127. doi:<a href=\"https://doi.org/10.1016/j.ejc.2025.104138\">10.1016/j.ejc.2025.104138</a>","short":"Z. Dvořák, B. Moore, M. Seifrtová, R. Šámal, European Journal of Combinatorics 127 (2025).","apa":"Dvořák, Z., Moore, B., Seifrtová, M., &#38; Šámal, R. (2025). Precoloring extension in planar near-Eulerian-triangulations. <i>European Journal of Combinatorics</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.ejc.2025.104138\">https://doi.org/10.1016/j.ejc.2025.104138</a>","ista":"Dvořák Z, Moore B, Seifrtová M, Šámal R. 2025. Precoloring extension in planar near-Eulerian-triangulations. European Journal of Combinatorics. 127, 104138.","mla":"Dvořák, Zdeněk, et al. “Precoloring Extension in Planar Near-Eulerian-Triangulations.” <i>European Journal of Combinatorics</i>, vol. 127, 104138, Elsevier, 2025, doi:<a href=\"https://doi.org/10.1016/j.ejc.2025.104138\">10.1016/j.ejc.2025.104138</a>.","chicago":"Dvořák, Zdeněk, Benjamin Moore, Michaela Seifrtová, and Robert Šámal. “Precoloring Extension in Planar Near-Eulerian-Triangulations.” <i>European Journal of Combinatorics</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.ejc.2025.104138\">https://doi.org/10.1016/j.ejc.2025.104138</a>."},"OA_type":"hybrid","oa_version":"Published Version","status":"public","month":"06"},{"publication_status":"published","OA_place":"publisher","abstract":[{"text":"We investigate quantum transport in a two-dimensional electron system coupled to a chiral molecular potential, demonstrating how molecular chirality and orientation affect charge and spin transport properties. We propose a minimal model for realizing true chiral symmetry breaking on a magnetized surface, with a crucial role played by the tilt angle of the molecular dipole with respect to the surface. For non-zero tilting, we show that the Hall response exhibits clear signatures of chirality-induced effects, in both charge- and spin-resolved observables. Concerning the former, tilted enantiomers produce asymmetric Hall conductances and, even more remarkably, the persistence of this feature in the absence of spin–orbit coupling (SOC) signals how the enantiospecific charge response results from electron scattering off the molecular potential. Concerning spin-resolved observables where SOC plays a relevant role, we reveal that chiral symmetry breaking is crucial in enabling spin-flipping processes.","lang":"eng"}],"doi":"10.1063/5.0271155","pmid":1,"citation":{"ieee":"R. Al Hyder, M. Lemeshko, and A. Cappellaro, “Quantum transport in the presence of a chiral molecular potential,” <i>The Journal of Chemical Physics</i>, vol. 162, no. 23. AIP Publishing, 2025.","short":"R. Al Hyder, M. Lemeshko, A. Cappellaro, The Journal of Chemical Physics 162 (2025).","ama":"Al Hyder R, Lemeshko M, Cappellaro A. Quantum transport in the presence of a chiral molecular potential. <i>The Journal of Chemical Physics</i>. 2025;162(23). doi:<a href=\"https://doi.org/10.1063/5.0271155\">10.1063/5.0271155</a>","apa":"Al Hyder, R., Lemeshko, M., &#38; Cappellaro, A. (2025). Quantum transport in the presence of a chiral molecular potential. <i>The Journal of Chemical Physics</i>. AIP Publishing. <a href=\"https://doi.org/10.1063/5.0271155\">https://doi.org/10.1063/5.0271155</a>","ista":"Al Hyder R, Lemeshko M, Cappellaro A. 2025. Quantum transport in the presence of a chiral molecular potential. The Journal of Chemical Physics. 162(23), 234106.","mla":"Al Hyder, Ragheed, et al. “Quantum Transport in the Presence of a Chiral Molecular Potential.” <i>The Journal of Chemical Physics</i>, vol. 162, no. 23, 234106, AIP Publishing, 2025, doi:<a href=\"https://doi.org/10.1063/5.0271155\">10.1063/5.0271155</a>.","chicago":"Al Hyder, Ragheed, Mikhail Lemeshko, and Alberto Cappellaro. “Quantum Transport in the Presence of a Chiral Molecular Potential.” <i>The Journal of Chemical Physics</i>. AIP Publishing, 2025. <a href=\"https://doi.org/10.1063/5.0271155\">https://doi.org/10.1063/5.0271155</a>."},"OA_type":"hybrid","oa_version":"Published Version","month":"06","status":"public","arxiv":1,"ddc":["530"],"date_published":"2025-06-21T00:00:00Z","oa":1,"file_date_updated":"2025-06-23T14:03:30Z","isi":1,"publication":"The Journal of Chemical Physics","acknowledgement":"We thank Artem Volosniev, Narcis Avarvari, Georgios Koutentakis, Sandro Wimberger, and Binghai Yan for useful discussions. R.A. received funding from the Austrian Academy of Science ÖWA, Grant No. PR1029OEAW03. M.L. acknowledges support by the European Research Council (ERC) Starting Grant No. 801770 (ANGULON). A.C. received funding from the European Union’s Horizon Europe research and innovation program under the Marie Skłodowska-Curie Grant Agreement No. 101062862-NeqMolRot.","volume":162,"date_updated":"2025-09-30T13:40:55Z","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","scopus_import":"1","day":"21","has_accepted_license":"1","year":"2025","language":[{"iso":"eng"}],"type":"journal_article","_id":"19880","ec_funded":1,"intvolume":"       162","publication_identifier":{"issn":["0021-9606"],"eissn":["1089-7690"]},"project":[{"name":"Angulon: physics and applications of a new quasiparticle","call_identifier":"H2020","grant_number":"801770","_id":"2688CF98-B435-11E9-9278-68D0E5697425"},{"name":"Non-Equilibrium Field Theory of Molecular Rotations","_id":"bd7b5202-d553-11ed-ba76-9b1c1b258338","grant_number":"101062862"},{"_id":"8fa7db46-16d5-11f0-9cad-917600954daf","grant_number":"12078","name":"Polarons in Lead Halide Perovskites"}],"issue":"23","department":[{"_id":"MiLe"}],"publisher":"AIP Publishing","author":[{"first_name":"Ragheed","full_name":"Al Hyder, Ragheed","last_name":"Al Hyder","id":"d1c405be-ae15-11ed-8510-ccf53278162e"},{"first_name":"Mikhail","full_name":"Lemeshko, Mikhail","last_name":"Lemeshko","orcid":"0000-0002-6990-7802","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Cappellaro, Alberto","first_name":"Alberto","id":"9d13b3cb-30a2-11eb-80dc-f772505e8660","orcid":"0000-0001-6110-2359","last_name":"Cappellaro"}],"quality_controlled":"1","article_number":"234106","article_type":"original","external_id":{"arxiv":["2503.14124"],"pmid":["40526561"],"isi":["001512872900010"]},"article_processing_charge":"Yes (via OA deal)","title":"Quantum transport in the presence of a chiral molecular potential","date_created":"2025-06-23T13:55:28Z","corr_author":"1","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"relation":"main_file","checksum":"e278631d949657baa9d5309dad5f4b77","date_updated":"2025-06-23T14:03:30Z","date_created":"2025-06-23T14:03:30Z","success":1,"file_id":"19881","content_type":"application/pdf","file_size":7202681,"access_level":"open_access","file_name":"2025_JourChemicalPhysics_AlHyder.pdf","creator":"dernst"}]},{"date_created":"2025-06-24T06:56:03Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","corr_author":"1","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"day":"01","file":[{"success":1,"file_id":"19893","date_created":"2025-06-24T15:14:13Z","file_size":3404814792,"file_name":"DatasetsPaper.zip","access_level":"open_access","content_type":"application/x-zip-compressed","creator":"jsaezmol","relation":"main_file","checksum":"eff1ae9e46599fdfab8da00a2ca3c289","date_updated":"2025-06-24T15:14:13Z"},{"relation":"main_file","date_updated":"2025-06-25T07:11:52Z","checksum":"21840ceac04d677a799b8e5bd919804f","access_level":"open_access","file_size":622,"file_name":"README.txt","content_type":"text/plain","file_id":"19899","success":1,"date_created":"2025-06-25T07:11:52Z","creator":"jsaezmol"}],"year":"2025","has_accepted_license":"1","oa":1,"file_date_updated":"2025-06-25T07:11:52Z","ddc":["530"],"date_published":"2025-06-01T00:00:00Z","acknowledgement":"The authors would like to thank Barnaby van Straaten, Jonas Schuff, Daniel Jirovec and Hanifa Tidjani for fruitful discussions. This research was supported by the Scientific Service Units of ISTA through resources provided by the MIBA Machine Shop and the Nanofabrication Facility. G.K. acknowledges support from the NOMIS Foundation, the HORIZON-RIA (project no. 101069515) and the FWF Projects (DOIs: 10.55776/F86 and 10.55776/I5060). N.A. acknowledges support from the European Research Council (grant agreement 948932), and the Royal Society (grant no. URF/R1/191150). This project received support from the US Army Research Office (ARO) under Award No. W911NF-24-2-0043. C.C. acknowledges support from the UKRI Doctoral Training Partnership related to EP/W524311/1 (project ref. 2887634).","title":"Automated All-RF Tuning for Spin Qubit Readout and Control","article_processing_charge":"No","contributor":[{"contributor_type":"researcher","last_name":"Carlsson","first_name":"Cornelius"},{"last_name":"Fedele","contributor_type":"researcher","first_name":"Federico "},{"first_name":"Stefano","contributor_type":"researcher","last_name":"Calcaterra"},{"last_name":"Chrastina","contributor_type":"researcher","first_name":" Daniel "},{"first_name":"Giovanni ","last_name":"Isella","contributor_type":"researcher"},{"contributor_type":"researcher","orcid":"0000-0001-8342-202X","id":"38DB5788-F248-11E8-B48F-1D18A9856A87","last_name":"Katsaros","first_name":"Georgios"},{"first_name":"Natalia","last_name":"Ares","contributor_type":"researcher"}],"date_updated":"2025-07-01T07:19:26Z","oa_version":"Published Version","publisher":"Institute of Science and Technology Austria","department":[{"_id":"GradSch"},{"_id":"GeKa"}],"citation":{"apa":"Saez Mollejo, J. (2025). Automated All-RF Tuning for Spin Qubit Readout and Control. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:19885\">https://doi.org/10.15479/AT:ISTA:19885</a>","ista":"Saez Mollejo J. 2025. Automated All-RF Tuning for Spin Qubit Readout and Control, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT:ISTA:19885\">10.15479/AT:ISTA:19885</a>.","mla":"Saez Mollejo, Jaime. <i>Automated All-RF Tuning for Spin Qubit Readout and Control</i>. Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:19885\">10.15479/AT:ISTA:19885</a>.","chicago":"Saez Mollejo, Jaime. “Automated All-RF Tuning for Spin Qubit Readout and Control.” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT:ISTA:19885\">https://doi.org/10.15479/AT:ISTA:19885</a>.","ieee":"J. Saez Mollejo, “Automated All-RF Tuning for Spin Qubit Readout and Control.” Institute of Science and Technology Austria, 2025.","ama":"Saez Mollejo J. Automated All-RF Tuning for Spin Qubit Readout and Control. 2025. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:19885\">10.15479/AT:ISTA:19885</a>","short":"J. Saez Mollejo, (2025)."},"status":"public","month":"06","author":[{"full_name":"Saez Mollejo, Jaime","first_name":"Jaime","id":"e0390f72-f6e0-11ea-865d-862393336714","last_name":"Saez Mollejo"}],"type":"research_data","_id":"19885","acknowledged_ssus":[{"_id":"M-Shop"},{"_id":"NanoFab"}],"doi":"10.15479/AT:ISTA:19885","abstract":[{"lang":"eng","text":"This .zip file contains the data to reproduce the figures and supplementary figures of \"Automated All-RF Tuning for Spin Qubit Readout and Control\" by Cornelius Carlsson and Jaime Saez-Mollejo et al."}],"project":[{"_id":"34c0acea-11ca-11ed-8bc3-8775e10fd452","grant_number":"101069515","name":"Integrated Germanium Quantum Technology"},{"_id":"c0977eea-5a5b-11eb-8a69-a862db0cf4d1","grant_number":"I05060","name":"High impedance circuit quantum electrodynamics with hole spins"},{"name":"Center for Correlated Quantum Materials and Solid State Quantum Systems: Conventional  and unconventional topological superconductors","_id":"34a66131-11ca-11ed-8bc3-a31681c6b03e","grant_number":"F8606"}]},{"acknowledgement":"We thank all members of the Martin Loose lab at ISTA for helpful discussions and Marko Kojic for critical reading of the manuscript. This research was supported by the Scientific Service Units (SSU) of ISTA through resources provided by the Imaging & Optics Facility (IOF), the Scientific Computing (SciComp) and the Electron Microscopy Facility (EMF), as well as the Lab Support Facility (LSF). This project has received funding from the European Union’s Horizon 2020 research and innovation program under the Marie Skłodowska-Curie Grant Agreement No.101034413 awarded to BLS as well as an ERC grant (ActinID, 101076260) from the European Union awarded to FKMS. Views and opinions expressed are however those of the author(s) only and do not necessarily reflect those of the European Union or the European Research Council. Neither the European Union nor the granting authority can be held responsible for them.\r\n\r\nWe are grateful for Antonia Herrero (Sevilla University) for sharing her extensive BACTH plasmid library and other plasmids as well as cyanobacterial strains. Likewise, we would like to thank Tal Dagan and Fabian Nies (both Kiel University) for sharing cyanobacterial strains and plasmids and for valuable discussions.\r\n\r\nWe would further like to express our gratitude to Nicolas Sapay and Alexis Michon for providing the Amphipaseek code, which enabled us to perform our large-scale amphipathic helix screen of cyanobacterial CorR proteins. Finally, we also want to thank Jesse Hansen for advice in cryo-EM data processing","oa":1,"file_date_updated":"2025-07-02T08:10:21Z","date_published":"2025-06-27T00:00:00Z","contributor":[{"contributor_type":"project_leader","last_name":"Springstein","orcid":"0000-0002-3461-5391","id":"b4eb62ef-ac72-11ed-9503-ed3b4d66c083","first_name":"Benjamin L"},{"first_name":"Manjunath","contributor_type":"researcher","id":"305ab18b-dc7d-11ea-9b2f-b58195228ea2","last_name":"Javoor"},{"last_name":"Megrian","contributor_type":"researcher","first_name":"Daniela"},{"id":"ffab949d-133f-11ed-8f02-94de21ace503","last_name":"Hajdu","contributor_type":"researcher","first_name":"Roman"},{"first_name":"Dustin M","last_name":"Hanke","contributor_type":"researcher"},{"contributor_type":"researcher","orcid":"0000-0003-4790-8078","id":"48AD8942-F248-11E8-B48F-1D18A9856A87","last_name":"Schur","first_name":"Florian 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BY-NC-ND 4.0)"},"day":"27","ec_funded":1,"_id":"19915","type":"research_data","doi":"10.15479/AT:ISTA:19915","project":[{"grant_number":"101034413","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","name":"IST-BRIDGE: International postdoctoral program","call_identifier":"H2020"},{"grant_number":"101076260","_id":"bd980d18-d553-11ed-ba76-ceaa645c97eb","name":"A molecular atlas of Actin filament IDentities in the cell motility machinery"}],"publisher":"Institute of Science and Technology Austria","department":[{"_id":"MaLo"}],"oa_version":"None","citation":{"ieee":"B. L. Springstein, “Files for ‘Evolutionary repurposing of a DNA segregation machinery into a cytoskeletal system controlling cyanobacterial cell shape.’” Institute of Science and Technology Austria, 2025.","ama":"Springstein BL. Files for “Evolutionary repurposing of a DNA segregation machinery into a cytoskeletal system controlling cyanobacterial cell shape.” 2025. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:19915\">10.15479/AT:ISTA:19915</a>","short":"B.L. Springstein, (2025).","ista":"Springstein BL. 2025. Files for ‘Evolutionary repurposing of a DNA segregation machinery into a cytoskeletal system controlling cyanobacterial cell shape’, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT:ISTA:19915\">10.15479/AT:ISTA:19915</a>.","apa":"Springstein, B. L. (2025). Files for “Evolutionary repurposing of a DNA segregation machinery into a cytoskeletal system controlling cyanobacterial cell shape.” Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:19915\">https://doi.org/10.15479/AT:ISTA:19915</a>","chicago":"Springstein, Benjamin L. “Files for ‘Evolutionary Repurposing of a DNA Segregation Machinery into a Cytoskeletal System Controlling Cyanobacterial Cell Shape.’” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT:ISTA:19915\">https://doi.org/10.15479/AT:ISTA:19915</a>.","mla":"Springstein, Benjamin L. <i>Files for “Evolutionary Repurposing of a DNA Segregation Machinery into a Cytoskeletal System Controlling Cyanobacterial Cell Shape.”</i> Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:19915\">10.15479/AT:ISTA:19915</a>."},"author":[{"last_name":"Springstein","orcid":"0000-0002-3461-5391","id":"b4eb62ef-ac72-11ed-9503-ed3b4d66c083","first_name":"Benjamin L","full_name":"Springstein, Benjamin L"}],"month":"06","status":"public"},{"volume":222,"date_updated":"2025-12-30T09:00:42Z","ddc":["570"],"date_published":"2025-09-01T00:00:00Z","oa":1,"file_date_updated":"2025-12-30T09:00:04Z","isi":1,"acknowledgement":"Sequencing was performed by the Vienna BioCenter Core Facilities (Medical University of Vienna Core Facility) and the Biomedical Sequencing Facility at CeMM, Vienna. Cell sorting and flow cytometry were performed at the Core Facility Flow Cytometry and Imaging (Medical University of Vienna). We thank Jasmin Schwarz, Gudrun Kohl, Petra Pjevac, and Joana Seneca Silva from the Joint Microbiome Facility of the Medical University of Vienna and the University of Vienna for assisting with amplicon and metagenomic sequencing, as well as repositing of sequencing data. We thank Sophia Derdak and Michael Schuster for initial data analysis, Robert Vilvoi and Stephan Hemm for animal handling, Marcel Kertesz for mouse genotyping, and Salwan Roumaia for next generation sequencing sample preparation. Treatment schemes and graphical abstracts were created with https://BioRender.com.\r\n\r\nThis work was supported by the Austrian Science Fund, grant number ZK 57-B28 to C. Vesely, R. Gawish, and F.C. Pereira; grant number V 1025-B to R. Gawish; grant number DOC32-B28 to R. Varada and M.F. Jantsch; and F8007 and P32678 to M.F. Jantsch. Open Access funding provided by Medical University of Vienna.","publication":"Journal of Experimental Medicine","day":"01","has_accepted_license":"1","year":"2025","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","doi":"10.1084/jem.20240109","abstract":[{"text":"Patho-mechanistic origins of ulcerative colitis are still poorly understood. The actin cross-linker filamin A (FLNA) impacts cellular responses through interaction with cytosolic proteins. Posttranscriptional A-to-I editing generates two forms of FLNA: genome-encoded FLNAQ and FLNAR. FLNA is edited in colon fibroblasts, smooth muscle cells, and endothelial cells. We found that the FLNA editing status determines colitis severity. Editing was highest in healthy colons and reduced during murine and human colitis. Mice that exclusively express FLNAR were highly resistant to DSS-induced colitis, whereas fully FLNAQ animals developed severe inflammation. While the genetic induction of FLNA editing influenced transcriptional states of structural cells and microbiome composition, we found that FLNAR exerts protection specifically via myeloid cells, which are physiologically unedited. Introducing fixed FLNAR did not hamper cell migration but reduced macrophage inflammation and rendered neutrophils less prone to NETosis. Thus, loss of FLNA editing correlates with colitis severity, and targeted editing of myeloid cells serves as a novel therapeutic approach in intestinal inflammation.","lang":"eng"}],"publication_status":"published","OA_place":"publisher","month":"09","status":"public","pmid":1,"citation":{"short":"R. Gawish, R. Varada, F. Deckert, A. Hladik, L. Steinbichl, L. Cimatti, K. Milanovic, M. Jain, N. Torgasheva, A. Tanzer, K. De Paepe, T. Van De Wiele, B. Hausmann, M. Lang, M. Pechhacker, N. Ibrahim, I. de Vries, C. Brostjan, M.K. Sixt, C. Gasche, L. Boon, D. Berry, M.F. Jantsch, F.C. Pereira, C. Vesely, Journal of Experimental Medicine 222 (2025).","ama":"Gawish R, Varada R, Deckert F, et al. Filamin A editing in myeloid cells reduces intestinal inflammation and protects from colitis. <i>Journal of Experimental Medicine</i>. 2025;222(9). doi:<a href=\"https://doi.org/10.1084/jem.20240109\">10.1084/jem.20240109</a>","ieee":"R. Gawish <i>et al.</i>, “Filamin A editing in myeloid cells reduces intestinal inflammation and protects from colitis,” <i>Journal of Experimental Medicine</i>, vol. 222, no. 9. Rockefeller University Press, 2025.","mla":"Gawish, Riem, et al. “Filamin A Editing in Myeloid Cells Reduces Intestinal Inflammation and Protects from Colitis.” <i>Journal of Experimental Medicine</i>, vol. 222, no. 9, e20240109, Rockefeller University Press, 2025, doi:<a href=\"https://doi.org/10.1084/jem.20240109\">10.1084/jem.20240109</a>.","chicago":"Gawish, Riem, Rajagopal Varada, Florian Deckert, Anastasiya Hladik, Linda Steinbichl, Laura Cimatti, Katarina Milanovic, et al. “Filamin A Editing in Myeloid Cells Reduces Intestinal Inflammation and Protects from Colitis.” <i>Journal of Experimental Medicine</i>. Rockefeller University Press, 2025. <a href=\"https://doi.org/10.1084/jem.20240109\">https://doi.org/10.1084/jem.20240109</a>.","apa":"Gawish, R., Varada, R., Deckert, F., Hladik, A., Steinbichl, L., Cimatti, L., … Vesely, C. (2025). Filamin A editing in myeloid cells reduces intestinal inflammation and protects from colitis. <i>Journal of Experimental Medicine</i>. Rockefeller University Press. <a href=\"https://doi.org/10.1084/jem.20240109\">https://doi.org/10.1084/jem.20240109</a>","ista":"Gawish R, Varada R, Deckert F, Hladik A, Steinbichl L, Cimatti L, Milanovic K, Jain M, Torgasheva N, Tanzer A, De Paepe K, Van De Wiele T, Hausmann B, Lang M, Pechhacker M, Ibrahim N, de Vries I, Brostjan C, Sixt MK, Gasche C, Boon L, Berry D, Jantsch MF, Pereira FC, Vesely C. 2025. Filamin A editing in myeloid cells reduces intestinal inflammation and protects from colitis. Journal of Experimental Medicine. 222(9), e20240109."},"oa_version":"Published Version","OA_type":"hybrid","article_processing_charge":"Yes (via OA deal)","title":"Filamin A editing in myeloid cells reduces intestinal inflammation and protects from colitis","article_type":"original","external_id":{"pmid":["40471139"],"isi":["001502896900001"]},"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"date_updated":"2025-12-30T09:00:04Z","checksum":"708d61fb8cf1d83ee1e33ddcfde0857e","relation":"main_file","creator":"dernst","file_name":"2025_JEM_Gawish.pdf","file_size":9349311,"access_level":"open_access","content_type":"application/pdf","success":1,"file_id":"20899","date_created":"2025-12-30T09:00:04Z"}],"date_created":"2025-06-29T22:01:15Z","publication_identifier":{"eissn":["1540-9538"],"issn":["0022-1007"]},"language":[{"iso":"eng"}],"type":"journal_article","_id":"19928","intvolume":"       222","author":[{"full_name":"Gawish, Riem","first_name":"Riem","last_name":"Gawish"},{"last_name":"Varada","first_name":"Rajagopal","full_name":"Varada, Rajagopal"},{"full_name":"Deckert, Florian","first_name":"Florian","last_name":"Deckert"},{"full_name":"Hladik, Anastasiya","first_name":"Anastasiya","last_name":"Hladik"},{"last_name":"Steinbichl","first_name":"Linda","full_name":"Steinbichl, Linda"},{"last_name":"Cimatti","full_name":"Cimatti, Laura","first_name":"Laura"},{"last_name":"Milanovic","full_name":"Milanovic, Katarina","first_name":"Katarina"},{"first_name":"Mamta","full_name":"Jain, Mamta","last_name":"Jain"},{"last_name":"Torgasheva","first_name":"Natalya","full_name":"Torgasheva, Natalya"},{"full_name":"Tanzer, Andrea","first_name":"Andrea","last_name":"Tanzer"},{"last_name":"De Paepe","first_name":"Kim","full_name":"De Paepe, Kim"},{"full_name":"Van De Wiele, Tom","first_name":"Tom","last_name":"Van De Wiele"},{"last_name":"Hausmann","full_name":"Hausmann, Bela","first_name":"Bela"},{"last_name":"Lang","full_name":"Lang, Michaela","first_name":"Michaela"},{"last_name":"Pechhacker","full_name":"Pechhacker, Martin","first_name":"Martin"},{"full_name":"Ibrahim, Nahla","first_name":"Nahla","last_name":"Ibrahim"},{"last_name":"De Vries","id":"4C7D837E-F248-11E8-B48F-1D18A9856A87","first_name":"Ingrid","full_name":"De Vries, Ingrid"},{"full_name":"Brostjan, Christine","first_name":"Christine","last_name":"Brostjan"},{"last_name":"Sixt","id":"41E9FBEA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6620-9179","first_name":"Michael K","full_name":"Sixt, Michael K"},{"last_name":"Gasche","full_name":"Gasche, Christoph","first_name":"Christoph"},{"last_name":"Boon","full_name":"Boon, Louis","first_name":"Louis"},{"first_name":"David","full_name":"Berry, David","last_name":"Berry"},{"last_name":"Jantsch","full_name":"Jantsch, Michael F.","first_name":"Michael F."},{"first_name":"Fatima C.","full_name":"Pereira, Fatima C.","last_name":"Pereira"},{"last_name":"Vesely","full_name":"Vesely, Cornelia","first_name":"Cornelia"}],"quality_controlled":"1","article_number":"e20240109","issue":"9","department":[{"_id":"MiSi"}],"publisher":"Rockefeller University Press"},{"article_number":"A139","quality_controlled":"1","author":[{"first_name":"Siddhartha","full_name":"Gurung-López, Siddhartha","last_name":"Gurung-López"},{"first_name":"Chris","full_name":"Byrohl, Chris","last_name":"Byrohl"},{"first_name":"Max","full_name":"Gronke, Max","last_name":"Gronke"},{"last_name":"Spinoso","full_name":"Spinoso, Daniele","first_name":"Daniele"},{"last_name":"Torralba Torregrosa","orcid":"0000-0001-5586-6950","id":"018f0249-0e87-11f0-b167-cbce08fbd541","first_name":"Alberto","full_name":"Torralba Torregrosa, Alberto"},{"last_name":"Fernández-Soto","full_name":"Fernández-Soto, Alberto","first_name":"Alberto"},{"last_name":"Arnalte-Mur","first_name":"Pablo","full_name":"Arnalte-Mur, Pablo"},{"last_name":"Martínez","full_name":"Martínez, Vicent J.","first_name":"Vicent J."}],"department":[{"_id":"JoMa"}],"publisher":"EDP Sciences","publication_identifier":{"eissn":["1432-0746"],"issn":["0004-6361"]},"intvolume":"       698","_id":"19929","type":"journal_article","language":[{"iso":"eng"}],"file":[{"creator":"dernst","file_id":"19933","success":1,"date_created":"2025-06-30T08:28:40Z","file_size":5758102,"access_level":"open_access","file_name":"2025_AstronomyAstrophysics_GurungLopez.pdf","content_type":"application/pdf","checksum":"a50a817b72f03534c6a867035b51e433","date_updated":"2025-06-30T08:28:40Z","relation":"main_file"}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"date_created":"2025-06-29T22:01:15Z","title":"zELDA II: Reconstruction of galactic Lyman-alpha spectra attenuated by the intergalactic medium using neural networks","article_processing_charge":"No","external_id":{"isi":["001507317300003"],"arxiv":["2501.04077"]},"article_type":"original","month":"06","status":"public","OA_type":"diamond","oa_version":"Published Version","citation":{"short":"S. Gurung-López, C. Byrohl, M. Gronke, D. Spinoso, A. Torralba Torregrosa, A. Fernández-Soto, P. Arnalte-Mur, V.J. Martínez, Astronomy &#38; Astrophysics 698 (2025).","ama":"Gurung-López S, Byrohl C, Gronke M, et al. zELDA II: Reconstruction of galactic Lyman-alpha spectra attenuated by the intergalactic medium using neural networks. <i>Astronomy &#38; Astrophysics</i>. 2025;698. doi:<a href=\"https://doi.org/10.1051/0004-6361/202453547\">10.1051/0004-6361/202453547</a>","ieee":"S. Gurung-López <i>et al.</i>, “zELDA II: Reconstruction of galactic Lyman-alpha spectra attenuated by the intergalactic medium using neural networks,” <i>Astronomy &#38; Astrophysics</i>, vol. 698. EDP Sciences, 2025.","mla":"Gurung-López, Siddhartha, et al. “ZELDA II: Reconstruction of Galactic Lyman-Alpha Spectra Attenuated by the Intergalactic Medium Using Neural Networks.” <i>Astronomy &#38; Astrophysics</i>, vol. 698, A139, EDP Sciences, 2025, doi:<a href=\"https://doi.org/10.1051/0004-6361/202453547\">10.1051/0004-6361/202453547</a>.","chicago":"Gurung-López, Siddhartha, Chris Byrohl, Max Gronke, Daniele Spinoso, Alberto Torralba Torregrosa, Alberto Fernández-Soto, Pablo Arnalte-Mur, and Vicent J. Martínez. “ZELDA II: Reconstruction of Galactic Lyman-Alpha Spectra Attenuated by the Intergalactic Medium Using Neural Networks.” <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2025. <a href=\"https://doi.org/10.1051/0004-6361/202453547\">https://doi.org/10.1051/0004-6361/202453547</a>.","apa":"Gurung-López, S., Byrohl, C., Gronke, M., Spinoso, D., Torralba Torregrosa, A., Fernández-Soto, A., … Martínez, V. J. (2025). zELDA II: Reconstruction of galactic Lyman-alpha spectra attenuated by the intergalactic medium using neural networks. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a href=\"https://doi.org/10.1051/0004-6361/202453547\">https://doi.org/10.1051/0004-6361/202453547</a>","ista":"Gurung-López S, Byrohl C, Gronke M, Spinoso D, Torralba Torregrosa A, Fernández-Soto A, Arnalte-Mur P, Martínez VJ. 2025. zELDA II: Reconstruction of galactic Lyman-alpha spectra attenuated by the intergalactic medium using neural networks. Astronomy &#38; Astrophysics. 698, A139."},"doi":"10.1051/0004-6361/202453547","abstract":[{"text":"Context. The observed Lyman-alpha (Lyα) line profile is a convolution of the complex Lyα radiative transfer taking place in the interstellar, circumgalactic, and intergalactic media (ISM, CGM, and IGM, respectively). Discerning the different components of the Lyα line is crucial in order to use it as a probe of galaxy formation or the evolution of the IGM.\r\n\r\nAims. We aim to present the second version of zELDA (redshift Estimator for Line profiles of Distant Lyman-Alpha emitters), an open-source Python module focused on modelling and fitting observed Lyα line profiles. This new version of zELDA focuses on disentangling the galactic from the IGM effects.\r\n\r\nMethods. We built realistic Lyα line profiles that include the ISM and IGM contributions by combining the Monte Carlo radiative-transfer simulations for the so-called shell model (ISM) and IGM transmission curves generated from TNG100. We used these mock line profiles to train different artificial neural networks. These use the observed spectrum as input and the outflow parameters of the best fitting ‘shell model’ as output along with the redshift and Lyα emission IGM escape fraction of the source.\r\n\r\nResults. We measured the accuracy of zELDA on mock Lyα line profiles. We find that zELDA is capable of reconstructing the ISM emerging Lyα line profile with high levels of accuracy (Kolmogórov-Smirnov<0.1) for 95% of the cases for HST/COS-like observations and 80% for MUSE-WIDE-like observations. zELDA is able to measure the IGM transmission with typical uncertainties below 10% for HST/COS and MUSE-WIDE data.\r\n\r\nConclusions. This work represents a step forward in the high-precision reconstruction of IGM-attenuated Lyα line profiles. zELDA allows the disentanglement of the galactic and IGM contribution shaping the Lyα line shape and thus allows us to use Lyα as a tool to study galaxy and ISM evolution.","lang":"eng"}],"publication_status":"published","OA_place":"publisher","year":"2025","has_accepted_license":"1","day":"01","scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_updated":"2026-02-16T12:11:56Z","volume":698,"isi":1,"publication":"Astronomy & Astrophysics","acknowledgement":"The authors acknowledge the financial support from the MICIU with funding from the European Union NextGenerationEU and Generalitat Valenciana in the call Programa de Planes Complementarios de I+D+i (PRTR 2022) Project (VAL-JPAS), reference ASFAE/2022/025. This work is part of the research Project PID2023-149420NB-I00 funded by MICIU/AEI/10.13039/501100011033 and by ERDF/EU. This work is also supported by the project of excellence PROMETEO CIPROM/2023/21 of the Conselleria de Educación, Universidades y Empleo (Generalitat Valenciana). MG thanks the Max Planck Society for support through the Max Planck Research Group. DS acknowledges the support by the Tsinghua Shui Mu Scholarship, funding of the National Key R&D Program of China (grant no. 2023YFA1605600), the science research grants from the China Manned Space Project with no. CMS-CSST2021-A05, and the Tsinghua University Initiative Scientific Research Program (no. 20223080023). This research made use of matplotlib, a Python library for publication quality graphics (Hunter 2007), NumPy (Harris et al. 2020) and SciPy (Virtanen et al. 2020).","file_date_updated":"2025-06-30T08:28:40Z","oa":1,"ddc":["520"],"arxiv":1,"date_published":"2025-06-01T00:00:00Z"},{"abstract":[{"text":"We present an analysis of the UV continuum slope, β, using a sample of 726 galaxies with z > 4, selected from a mixture of JWST ERS, GTO, and GO observational programs. We considered only spectroscopic data obtained with the low-resolution (R ∼ 30 − 300) PRISM/CLEAR NIRSpec configuration. Studying the correlation between β and MUV, we find an overall decreasing trend, described by β = ( − 0.055 ± 0.017)MUV + ( − 2.98 ± 0.34). This is consistent with previous studies, where brighter galaxies show redder β values. However, when analyzing the trend in separate redshift bins, we find that at high redshift the relation becomes much flatter and is consistent with a flat slope within 1σ. Furthermore, we find that β tends to decrease with redshift, following β = ( − 0.075 ± 0.010)z + ( − 1.496 ± 0.056). This is consistent with most recent results showing a steepening of the spectra at higher z. We selected a sample of galaxies with extremely blue slopes (i.e., β < −2.6). Such slopes are steeper than predicted by stellar evolution models – even for dust-free, young, metal-poor populations – when the contribution of nebular emission is included. We selected 44 extremely blue galaxies (XBGs) and investigated the possible physical origin of their steep slopes by comparing them to a subsample of redder galaxies (matched in Δz = ±0.5 and ΔMUV = ±0.2). We find that XBGs have younger stellar populations, stronger ionization fields, lower dust attenuation, and lower but not pristine metallicity (∼10% Z⊙) compared to red galaxies. However, these properties alone cannot explain the extreme β values. Using indirect inference of Lyman continuum escape with the most recent models, we estimated the escape fraction fesc > 10% in at least 25% of the XBGs, whereas all the red sources exhibit much lower fesc values. A reduced nebular continuum contribution – resulting from either a high escape fraction or a bursty star formation history – is likely the origin of the extremely blue slopes.","lang":"eng"}],"doi":"10.1051/0004-6361/202453267","OA_place":"publisher","publication_status":"published","status":"public","month":"06","OA_type":"diamond","oa_version":"Published Version","citation":{"ieee":"D. Dottorini <i>et al.</i>, “Evolution of the UV slope of galaxies at cosmic morning (z &#62; 4): The properties of extremely blue galaxies,” <i>Astronomy &#38; Astrophysics</i>, vol. 698. EDP Sciences, 2025.","ama":"Dottorini D, Calabrò A, Pentericci L, et al. Evolution of the UV slope of galaxies at cosmic morning (z &#62; 4): The properties of extremely blue galaxies. <i>Astronomy &#38; Astrophysics</i>. 2025;698. doi:<a href=\"https://doi.org/10.1051/0004-6361/202453267\">10.1051/0004-6361/202453267</a>","short":"D. Dottorini, A. Calabrò, L. Pentericci, S. Mascia, M. Llerena, L. Napolitano, P. Santini, G. Roberts-Borsani, M. Castellano, R. Amorin, M. Dickinson, A. Fontana, N. Hathi, M. Hirschmann, A.M. Koekemoer, R.A. Lucas, E. Merlin, A. Morales, F. Pacucci, S. Wilkins, P. Arrabal Haro, M. Bagley, S.L. Finkelstein, J. Kartaltepe, C. Papovich, N. Pirzkal, Astronomy &#38; Astrophysics 698 (2025).","ista":"Dottorini D, Calabrò A, Pentericci L, Mascia S, Llerena M, Napolitano L, Santini P, Roberts-Borsani G, Castellano M, Amorin R, Dickinson M, Fontana A, Hathi N, Hirschmann M, Koekemoer AM, Lucas RA, Merlin E, Morales A, Pacucci F, Wilkins S, Arrabal Haro P, Bagley M, Finkelstein SL, Kartaltepe J, Papovich C, Pirzkal N. 2025. Evolution of the UV slope of galaxies at cosmic morning (z &#62; 4): The properties of extremely blue galaxies. Astronomy &#38; Astrophysics. 698, A234.","apa":"Dottorini, D., Calabrò, A., Pentericci, L., Mascia, S., Llerena, M., Napolitano, L., … Pirzkal, N. (2025). Evolution of the UV slope of galaxies at cosmic morning (z &#62; 4): The properties of extremely blue galaxies. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a href=\"https://doi.org/10.1051/0004-6361/202453267\">https://doi.org/10.1051/0004-6361/202453267</a>","chicago":"Dottorini, D., A. Calabrò, L. Pentericci, Sara Mascia, M. Llerena, L. Napolitano, P. Santini, et al. “Evolution of the UV Slope of Galaxies at Cosmic Morning (z &#62; 4): The Properties of Extremely Blue Galaxies.” <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2025. <a href=\"https://doi.org/10.1051/0004-6361/202453267\">https://doi.org/10.1051/0004-6361/202453267</a>.","mla":"Dottorini, D., et al. “Evolution of the UV Slope of Galaxies at Cosmic Morning (z &#62; 4): The Properties of Extremely Blue Galaxies.” <i>Astronomy &#38; Astrophysics</i>, vol. 698, A234, EDP Sciences, 2025, doi:<a href=\"https://doi.org/10.1051/0004-6361/202453267\">10.1051/0004-6361/202453267</a>."},"volume":698,"date_updated":"2026-02-16T12:11:39Z","file_date_updated":"2025-06-30T08:22:08Z","oa":1,"date_published":"2025-06-01T00:00:00Z","ddc":["520"],"arxiv":1,"acknowledgement":"We acknowledges support from the INAF Large Grant for Extragalactic Surveys with JWST and from the PRIN 2022 MUR project 2022CB3PJ3 – First Light And Galaxy aSsembly (FLAGS) funded by the European Union – Next Generation EU. PS acknowledges INAF Mini Grant 2022 “The evolution of passive galaxies through cosmic time”. Part of the research activities described in this paper were carried out with the contribution of the Next Generation EU funds within the National Recovery and Resilience Plan (PNRR), Mission 4 – Education and Research, Component 2 – From Research to Business (M4C2), Investment Line 3.1 – Strengthening and creation of Research Infrastructures, Project IR0000034 – “STILES – Strengthening the Italian Leadership in ELT and SKA”. RA acknowledges support of Grant project PID2023-147386NB-I00 funded by MICIU/AEI/10.13039/501100011033 and by ERDF/EU, and the Severo Ochoa grant CEX2021-001131-S funded by MCIN/AEI/10.13039/50110001103.","publication":"Astronomy & Astrophysics","isi":1,"day":"01","year":"2025","has_accepted_license":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","publication_identifier":{"issn":["0004-6361"],"eissn":["1432-0746"]},"type":"journal_article","language":[{"iso":"eng"}],"intvolume":"       698","_id":"19930","article_number":"A234","quality_controlled":"1","author":[{"last_name":"Dottorini","first_name":"D.","full_name":"Dottorini, D."},{"last_name":"Calabrò","first_name":"A.","full_name":"Calabrò, A."},{"last_name":"Pentericci","full_name":"Pentericci, L.","first_name":"L."},{"last_name":"Mascia","id":"edaf889c-c7cd-11ef-ab1b-bb28c431bd29","first_name":"Sara","full_name":"Mascia, Sara"},{"first_name":"M.","full_name":"Llerena, M.","last_name":"Llerena"},{"last_name":"Napolitano","first_name":"L.","full_name":"Napolitano, L."},{"full_name":"Santini, P.","first_name":"P.","last_name":"Santini"},{"full_name":"Roberts-Borsani, G.","first_name":"G.","last_name":"Roberts-Borsani"},{"first_name":"M.","full_name":"Castellano, M.","last_name":"Castellano"},{"full_name":"Amorin, R.","first_name":"R.","last_name":"Amorin"},{"full_name":"Dickinson, M.","first_name":"M.","last_name":"Dickinson"},{"full_name":"Fontana, A.","first_name":"A.","last_name":"Fontana"},{"full_name":"Hathi, N.","first_name":"N.","last_name":"Hathi"},{"full_name":"Hirschmann, M.","first_name":"M.","last_name":"Hirschmann"},{"last_name":"Koekemoer","first_name":"A. M.","full_name":"Koekemoer, A. M."},{"last_name":"Lucas","full_name":"Lucas, R. A.","first_name":"R. A."},{"full_name":"Merlin, E.","first_name":"E.","last_name":"Merlin"},{"first_name":"A.","full_name":"Morales, A.","last_name":"Morales"},{"full_name":"Pacucci, F.","first_name":"F.","last_name":"Pacucci"},{"last_name":"Wilkins","full_name":"Wilkins, S.","first_name":"S."},{"last_name":"Arrabal Haro","first_name":"P.","full_name":"Arrabal Haro, P."},{"first_name":"M.","full_name":"Bagley, M.","last_name":"Bagley"},{"full_name":"Finkelstein, S. L.","first_name":"S. L.","last_name":"Finkelstein"},{"last_name":"Kartaltepe","full_name":"Kartaltepe, J.","first_name":"J."},{"first_name":"C.","full_name":"Papovich, C.","last_name":"Papovich"},{"last_name":"Pirzkal","first_name":"N.","full_name":"Pirzkal, N."}],"department":[{"_id":"JoMa"}],"publisher":"EDP Sciences","title":"Evolution of the UV slope of galaxies at cosmic morning (z > 4): The properties of extremely blue galaxies","article_processing_charge":"No","external_id":{"isi":["001510826300019"],"arxiv":["2412.01623"]},"article_type":"original","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"relation":"main_file","checksum":"100f897d468de9d0113277c870035b62","date_updated":"2025-06-30T08:22:08Z","file_id":"19932","success":1,"date_created":"2025-06-30T08:22:08Z","access_level":"open_access","file_size":2442076,"file_name":"2025_AstronomyAstrophysics_Dottorini.pdf","content_type":"application/pdf","creator":"dernst"}],"date_created":"2025-06-29T22:01:15Z"},{"volume":698,"date_updated":"2026-02-16T12:11:22Z","oa":1,"file_date_updated":"2025-06-30T08:44:24Z","date_published":"2025-06-01T00:00:00Z","ddc":["520"],"arxiv":1,"isi":1,"publication":"Astronomy & Astrophysics","acknowledgement":"We would like to thank Xihan Ji, Hannah Übler, and Roberto Maiolino, for cordial and useful discussions. The BGU lensing group acknowledges support by grant No. 2020750 from the United States-Israel Binational Science Foundation (BSF) and grant No. 2109066 from the United States National Science Foundation (NSF), and by the Israel Science Foundation Grant No. 864/23. P.D. warmly thanks the European Commission’s and University of Groningen’s CO-FUND Rosalind Franklin program. This work is based on observations obtained with the NASA/ESA/CSA JWST, namely programs GO-2756, -2561, -2883, -3538, -4111, and -3516, retrieved from the Mikulski Archive for Space Telescopes (MAST) at the Space Telescope Science Institute (STScI). STScI is operated by the Association of Universities for Research in Astronomy, Inc. under NASA contract NAS 5-26555. The spectroscopy products presented herein, from JWST program GO-2561, were retrieved from the Dawn JWST Archive (DJA). DJA is an initiative of the Cosmic Dawn Center (DAWN), which is funded by the Danish National Research Foundation under grant DNRF140. The data used in this work may be retrieved from the MAST archive at: http://dx.doi.org/10.17909/p7t7-te67. This work also makes use of the Center for Computational Astrophysics at the Flatiron Institute which is supported by the Simons Foundation. Support for JWST programs GO-2561, -4111, and -3516 was provided by NASA through grants from STScI. This research made use of Astropy, (http://www.astropy.org) a community-developed core Python package for Astronomy (Astropy Collaboration 2013, 2018) and Photutils, an Astropy package for detection and photometry of astronomical sources (Bradley et al. 2024), as well as the packages NumPy (van der Walt et al. 2011), SciPy (Virtanen et al. 2020), Matplotlib (Hunter 2007), and the MAAT Astronomy and Astrophysics tools for MATLAB (Ofek 2014).","day":"01","year":"2025","has_accepted_license":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","doi":"10.1051/0004-6361/202554110","abstract":[{"lang":"eng","text":"JWST observations have uncovered a new population of red, compact objects at high redshifts dubbed “little red dots” (LRDs), which typically show broad emission lines and are thought to be dusty active galactic nuclei (AGNs). Some of their other features, however, challenge the AGN explanation, such as prominent Balmer breaks and extremely faint or even missing metal high-ionization lines, X-ray, or radio emission, including in deep stacks. Time variability is another robust test of AGN activity. Here, we exploit the z = 7.045 multiply imaged LRD A2744-QSO1, which offers a particularly unique test of variability due to lensing-induced time delays between the three images spanning 22 yr (2.7 yr in the rest-frame), to investigate its photometric and spectroscopic variability. We find the equivalent widths (EWs) of the broad Hα and Hβ lines, which are independent of magnification and other systematics, to exhibit significant variations, of up to 18 ± 3% for Hα and up to 22 ± 8% in Hβ, on a timescale of 875 d (2.4 yr) in the rest-frame. This suggests that A2744-QSO1 is indeed an AGN. We find no significant photometric variability beyond the limiting systematic uncertainties, so it currently cannot be determined whether the EW variations are due to line-flux or continuum variability. These results are consistent with a typical damped random walk variability model for an AGN such as A2744-QSO1 (MBH = 4 × 107 M⊙) given the sparse sampling of the light curve with the available data. Our results therefore support the AGN interpretation of this LRD, and highlight the need for further photometric and spectroscopic monitoring in order to build a detailed and reliable light curve."}],"publication_status":"published","OA_place":"publisher","status":"public","month":"06","oa_version":"Published Version","OA_type":"diamond","citation":{"apa":"Furtak, L. J., Secunda, A. R., Greene, J. E., Zitrin, A., Labbé, I., Golubchik, M., … Whitaker, K. E. (2025). Investigating photometric and spectroscopic variability in the multiply imaged little red dot A2744-QSO1. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a href=\"https://doi.org/10.1051/0004-6361/202554110\">https://doi.org/10.1051/0004-6361/202554110</a>","ista":"Furtak LJ, Secunda AR, Greene JE, Zitrin A, Labbé I, Golubchik M, Bezanson R, Kokorev V, Atek H, Brammer GB, Chemerynska I, Cutler SE, Dayal P, Feldmann R, Fujimoto S, Glazebrook K, Leja J, Ma Y, Matthee JJ, Naidu RP, Nelson EJ, Oesch PA, Pan R, Price SH, Suess KA, Wang B, Weaver JR, Whitaker KE. 2025. Investigating photometric and spectroscopic variability in the multiply imaged little red dot A2744-QSO1. Astronomy &#38; Astrophysics. 698, A227.","mla":"Furtak, Lukas J., et al. “Investigating Photometric and Spectroscopic Variability in the Multiply Imaged Little Red Dot A2744-QSO1.” <i>Astronomy &#38; Astrophysics</i>, vol. 698, A227, EDP Sciences, 2025, doi:<a href=\"https://doi.org/10.1051/0004-6361/202554110\">10.1051/0004-6361/202554110</a>.","chicago":"Furtak, Lukas J., Amy R. Secunda, Jenny E. Greene, Adi Zitrin, Ivo Labbé, Miriam Golubchik, Rachel Bezanson, et al. “Investigating Photometric and Spectroscopic Variability in the Multiply Imaged Little Red Dot A2744-QSO1.” <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2025. <a href=\"https://doi.org/10.1051/0004-6361/202554110\">https://doi.org/10.1051/0004-6361/202554110</a>.","ieee":"L. J. Furtak <i>et al.</i>, “Investigating photometric and spectroscopic variability in the multiply imaged little red dot A2744-QSO1,” <i>Astronomy &#38; Astrophysics</i>, vol. 698. EDP Sciences, 2025.","short":"L.J. Furtak, A.R. Secunda, J.E. Greene, A. Zitrin, I. Labbé, M. Golubchik, R. Bezanson, V. Kokorev, H. Atek, G.B. Brammer, I. Chemerynska, S.E. Cutler, P. Dayal, R. Feldmann, S. Fujimoto, K. Glazebrook, J. Leja, Y. Ma, J.J. Matthee, R.P. Naidu, E.J. Nelson, P.A. Oesch, R. Pan, S.H. Price, K.A. Suess, B. Wang, J.R. Weaver, K.E. Whitaker, Astronomy &#38; Astrophysics 698 (2025).","ama":"Furtak LJ, Secunda AR, Greene JE, et al. Investigating photometric and spectroscopic variability in the multiply imaged little red dot A2744-QSO1. <i>Astronomy &#38; Astrophysics</i>. 2025;698. doi:<a href=\"https://doi.org/10.1051/0004-6361/202554110\">10.1051/0004-6361/202554110</a>"},"title":"Investigating photometric and spectroscopic variability in the multiply imaged little red dot A2744-QSO1","article_processing_charge":"No","external_id":{"isi":["001510826300017"],"arxiv":["2502.07875"]},"article_type":"original","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"checksum":"567fa02a9791d489355ec75d02bb1cb9","date_updated":"2025-06-30T08:44:24Z","relation":"main_file","creator":"dernst","date_created":"2025-06-30T08:44:24Z","success":1,"file_id":"19934","content_type":"application/pdf","file_name":"2025_AstronomyAstrophysics_Furtak.pdf","access_level":"open_access","file_size":1835865}],"date_created":"2025-06-29T22:01:16Z","publication_identifier":{"eissn":["1432-0746"],"issn":["0004-6361"]},"type":"journal_article","language":[{"iso":"eng"}],"intvolume":"       698","_id":"19931","quality_controlled":"1","article_number":"A227","author":[{"first_name":"Lukas J.","full_name":"Furtak, Lukas J.","last_name":"Furtak"},{"first_name":"Amy R.","full_name":"Secunda, Amy R.","last_name":"Secunda"},{"last_name":"Greene","first_name":"Jenny E.","full_name":"Greene, Jenny E."},{"full_name":"Zitrin, Adi","first_name":"Adi","last_name":"Zitrin"},{"last_name":"Labbé","first_name":"Ivo","full_name":"Labbé, Ivo"},{"first_name":"Miriam","full_name":"Golubchik, Miriam","last_name":"Golubchik"},{"last_name":"Bezanson","first_name":"Rachel","full_name":"Bezanson, Rachel"},{"last_name":"Kokorev","full_name":"Kokorev, Vasily","first_name":"Vasily"},{"last_name":"Atek","first_name":"Hakim","full_name":"Atek, Hakim"},{"last_name":"Brammer","full_name":"Brammer, Gabriel B.","first_name":"Gabriel B."},{"first_name":"Iryna","full_name":"Chemerynska, Iryna","last_name":"Chemerynska"},{"last_name":"Cutler","first_name":"Sam E.","full_name":"Cutler, Sam E."},{"last_name":"Dayal","full_name":"Dayal, Pratika","first_name":"Pratika"},{"full_name":"Feldmann, Robert","first_name":"Robert","last_name":"Feldmann"},{"full_name":"Fujimoto, Seiji","first_name":"Seiji","last_name":"Fujimoto"},{"last_name":"Glazebrook","first_name":"Karl","full_name":"Glazebrook, Karl"},{"full_name":"Leja, Joel","first_name":"Joel","last_name":"Leja"},{"first_name":"Yilun","full_name":"Ma, Yilun","last_name":"Ma"},{"last_name":"Matthee","orcid":"0000-0003-2871-127X","id":"7439a258-f3c0-11ec-9501-9df22fe06720","first_name":"Jorryt J","full_name":"Matthee, Jorryt J"},{"last_name":"Naidu","first_name":"Rohan P.","full_name":"Naidu, Rohan P."},{"last_name":"Nelson","full_name":"Nelson, Erica J.","first_name":"Erica J."},{"last_name":"Oesch","full_name":"Oesch, Pascal A.","first_name":"Pascal A."},{"full_name":"Pan, Richard","first_name":"Richard","last_name":"Pan"},{"full_name":"Price, Sedona H.","first_name":"Sedona H.","last_name":"Price"},{"full_name":"Suess, Katherine A.","first_name":"Katherine A.","last_name":"Suess"},{"first_name":"Bingjie","full_name":"Wang, Bingjie","last_name":"Wang"},{"last_name":"Weaver","first_name":"John R.","full_name":"Weaver, John R."},{"full_name":"Whitaker, Katherine E.","first_name":"Katherine E.","last_name":"Whitaker"}],"publisher":"EDP Sciences","department":[{"_id":"JoMa"}]},{"article_type":"original","article_processing_charge":"Yes (in subscription journal)","title":"Destabilizing Iris","corr_author":"1","date_created":"2025-06-30T08:47:31Z","file":[{"date_updated":"2025-06-30T09:01:08Z","checksum":"6b72d84c10a10ba7cd1646e2c36dc1ff","relation":"main_file","creator":"dernst","file_size":843343,"access_level":"open_access","file_name":"2025_ProcACMProg_Spies.pdf","content_type":"application/pdf","file_id":"19938","success":1,"date_created":"2025-06-30T09:01:08Z"}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"_id":"19935","intvolume":"         9","language":[{"iso":"eng"}],"type":"journal_article","publication_identifier":{"eissn":["2475-1421"]},"department":[{"_id":"MiSa"}],"publisher":"Association for Computing Machinery","issue":"PLDI","author":[{"last_name":"Spies","full_name":"Spies, Simon","first_name":"Simon"},{"last_name":"Mück","full_name":"Mück, Niklas","first_name":"Niklas"},{"last_name":"Zeng","first_name":"Haoyi","full_name":"Zeng, Haoyi"},{"full_name":"Sammler, Michael Joachim","first_name":"Michael Joachim","id":"510d3901-2a03-11ee-914d-d9ae9011f0a7","last_name":"Sammler"},{"full_name":"Lattuada, Andrea","first_name":"Andrea","last_name":"Lattuada"},{"last_name":"Müller","full_name":"Müller, Peter","first_name":"Peter"},{"first_name":"Derek","full_name":"Dreyer, Derek","last_name":"Dreyer"}],"quality_controlled":"1","publication":"Proceedings of the ACM on Programming Languages","acknowledgement":"We would like to thank the anonymous reviewers for their helpful feedback and Alex Summers\r\nfor insightful discussions. This work was funded in part by a Google PhD Fellowship for the first\r\nauthor.","date_published":"2025-06-01T00:00:00Z","ddc":["000"],"file_date_updated":"2025-06-30T09:01:08Z","oa":1,"date_updated":"2025-06-30T09:10:11Z","volume":9,"scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","has_accepted_license":"1","year":"2025","day":"01","publication_status":"published","page":"848-873","OA_place":"publisher","abstract":[{"text":"The separation logic framework Iris has been built on the premise that all assertions are stable, meaning they unconditionally enjoy the famous frame rule. This gives Iris—and the numerous program logics that build on it—very modular reasoning principles. But stability also comes at a cost. It excludes a core feature of the Viper verifier family, heap-dependent expression assertions, which lift program expressions to the assertion level in order to reduce redundancy between code and specifications and better facilitate SMT-based automation.\r\nIn this paper, we bring heap-dependent expression assertions to Iris with Daenerys. To do so, we must first revisit the very core of Iris, extending it with a new form of unstable resources (and adapting the frame rule accordingly). On top, we then build a program logic with heap-dependent expression assertions and lay the foundations for connecting Iris to SMT solvers. We apply Daenerys to several case studies, including some that go beyond what Viper and Iris can do individually and others that benefit from the connection to SMT.","lang":"eng"}],"doi":"10.1145/3729284","citation":{"ieee":"S. Spies <i>et al.</i>, “Destabilizing Iris,” <i>Proceedings of the ACM on Programming Languages</i>, vol. 9, no. PLDI. Association for Computing Machinery, pp. 848–873, 2025.","short":"S. Spies, N. Mück, H. Zeng, M.J. Sammler, A. Lattuada, P. Müller, D. Dreyer, Proceedings of the ACM on Programming Languages 9 (2025) 848–873.","ama":"Spies S, Mück N, Zeng H, et al. Destabilizing Iris. <i>Proceedings of the ACM on Programming Languages</i>. 2025;9(PLDI):848-873. doi:<a href=\"https://doi.org/10.1145/3729284\">10.1145/3729284</a>","ista":"Spies S, Mück N, Zeng H, Sammler MJ, Lattuada A, Müller P, Dreyer D. 2025. Destabilizing Iris. Proceedings of the ACM on Programming Languages. 9(PLDI), 848–873.","apa":"Spies, S., Mück, N., Zeng, H., Sammler, M. J., Lattuada, A., Müller, P., &#38; Dreyer, D. (2025). Destabilizing Iris. <i>Proceedings of the ACM on Programming Languages</i>. Association for Computing Machinery. <a href=\"https://doi.org/10.1145/3729284\">https://doi.org/10.1145/3729284</a>","chicago":"Spies, Simon, Niklas Mück, Haoyi Zeng, Michael Joachim Sammler, Andrea Lattuada, Peter Müller, and Derek Dreyer. “Destabilizing Iris.” <i>Proceedings of the ACM on Programming Languages</i>. Association for Computing Machinery, 2025. <a href=\"https://doi.org/10.1145/3729284\">https://doi.org/10.1145/3729284</a>.","mla":"Spies, Simon, et al. “Destabilizing Iris.” <i>Proceedings of the ACM on Programming Languages</i>, vol. 9, no. PLDI, Association for Computing Machinery, 2025, pp. 848–73, doi:<a href=\"https://doi.org/10.1145/3729284\">10.1145/3729284</a>."},"oa_version":"Published Version","OA_type":"hybrid","month":"06","status":"public"},{"quality_controlled":"1","author":[{"first_name":"Kimaya","full_name":"Bedarkar, Kimaya","last_name":"Bedarkar"},{"first_name":"Laila","full_name":"Elbeheiry, Laila","last_name":"Elbeheiry"},{"full_name":"Sammler, Michael Joachim","first_name":"Michael Joachim","id":"510d3901-2a03-11ee-914d-d9ae9011f0a7","last_name":"Sammler"},{"last_name":"Gäher","first_name":"Lennard","full_name":"Gäher, Lennard"},{"last_name":"Brandenburg","first_name":"Björn","full_name":"Brandenburg, Björn"},{"last_name":"Dreyer","first_name":"Derek","full_name":"Dreyer, Derek"},{"full_name":"Garg, Deepak","first_name":"Deepak","last_name":"Garg"}],"issue":"PLDI","department":[{"_id":"MiSa"}],"publisher":"Association for Computing Machinery","publication_identifier":{"issn":["2475-1421"]},"type":"journal_article","language":[{"iso":"eng"}],"intvolume":"         9","_id":"19936","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"content_type":"application/pdf","file_name":"2025_ProcACMProg_Bedarkar.pdf","access_level":"open_access","file_size":1043790,"date_created":"2025-06-30T09:08:05Z","success":1,"file_id":"19939","creator":"dernst","relation":"main_file","date_updated":"2025-06-30T09:08:05Z","checksum":"8c18d777feb342a7265c54b16205ec4c"}],"date_created":"2025-06-30T08:47:58Z","corr_author":"1","title":"RefinedProsa: Connecting response-time analysis with C verification for interrupt-free schedulers","article_processing_charge":"Yes (in subscription journal)","article_type":"original","status":"public","month":"06","OA_type":"hybrid","oa_version":"Published Version","citation":{"ieee":"K. Bedarkar <i>et al.</i>, “RefinedProsa: Connecting response-time analysis with C verification for interrupt-free schedulers,” <i>Proceedings of the ACM on Programming Languages</i>, vol. 9, no. PLDI. Association for Computing Machinery, pp. 73–97, 2025.","short":"K. Bedarkar, L. Elbeheiry, M.J. Sammler, L. Gäher, B. Brandenburg, D. Dreyer, D. Garg, Proceedings of the ACM on Programming Languages 9 (2025) 73–97.","ama":"Bedarkar K, Elbeheiry L, Sammler MJ, et al. RefinedProsa: Connecting response-time analysis with C verification for interrupt-free schedulers. <i>Proceedings of the ACM on Programming Languages</i>. 2025;9(PLDI):73-97. doi:<a href=\"https://doi.org/10.1145/3729249\">10.1145/3729249</a>","apa":"Bedarkar, K., Elbeheiry, L., Sammler, M. J., Gäher, L., Brandenburg, B., Dreyer, D., &#38; Garg, D. (2025). RefinedProsa: Connecting response-time analysis with C verification for interrupt-free schedulers. <i>Proceedings of the ACM on Programming Languages</i>. Association for Computing Machinery. <a href=\"https://doi.org/10.1145/3729249\">https://doi.org/10.1145/3729249</a>","ista":"Bedarkar K, Elbeheiry L, Sammler MJ, Gäher L, Brandenburg B, Dreyer D, Garg D. 2025. RefinedProsa: Connecting response-time analysis with C verification for interrupt-free schedulers. Proceedings of the ACM on Programming Languages. 9(PLDI), 73–97.","mla":"Bedarkar, Kimaya, et al. “RefinedProsa: Connecting Response-Time Analysis with C Verification for Interrupt-Free Schedulers.” <i>Proceedings of the ACM on Programming Languages</i>, vol. 9, no. PLDI, Association for Computing Machinery, 2025, pp. 73–97, doi:<a href=\"https://doi.org/10.1145/3729249\">10.1145/3729249</a>.","chicago":"Bedarkar, Kimaya, Laila Elbeheiry, Michael Joachim Sammler, Lennard Gäher, Björn Brandenburg, Derek Dreyer, and Deepak Garg. “RefinedProsa: Connecting Response-Time Analysis with C Verification for Interrupt-Free Schedulers.” <i>Proceedings of the ACM on Programming Languages</i>. Association for Computing Machinery, 2025. <a href=\"https://doi.org/10.1145/3729249\">https://doi.org/10.1145/3729249</a>."},"abstract":[{"lang":"eng","text":"There has been a recent upsurge of interest in formal, machine-checked verification of timing guarantees for C implementations of real-time system schedulers. However, prior work has only considered tick-based schedulers, which enjoy a clearly defined notion of time: the time \"quantum\". In this work, we present a new approach to real-time systems verification for interrupt-free schedulers, which are commonly used in deeply embedded and resource-constrained systems but which do not enjoy a natural notion of periodic time. Our approach builds on and connects two recently developed Rocq-based systems—RefinedC (for foundational C verification) and Prosa (for verified response-time analysis)—adapting the former to reason about timed traces and the latter to reason about overheads. We apply the resulting system, which we call RefinedProsa, to verify Rössl, a simple yet representative, fixed-priority, non-preemptive, interrupt-free scheduler implemented in C."}],"doi":"10.1145/3729249","publication_status":"published","page":"73-97","OA_place":"publisher","day":"13","year":"2025","has_accepted_license":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","volume":9,"date_updated":"2025-06-30T09:09:55Z","oa":1,"file_date_updated":"2025-06-30T09:08:05Z","date_published":"2025-06-13T00:00:00Z","ddc":["000"],"acknowledgement":"We would like to thank the anonymous reviewers for their helpful feedback.\r\nThis project has received funding from the European Research Council (ERC) under the European\r\nUnion’s Horizon 2020 research and innovation programme (grant agreement No 803111).","publication":"Proceedings of the ACM on Programming Languages"},{"issue":"11","publisher":"Elsevier","department":[{"_id":"HeEd"}],"author":[{"first_name":"Mohammad","full_name":"Mahini, Mohammad","last_name":"Mahini"},{"last_name":"Beigy","full_name":"Beigy, Hamid","first_name":"Hamid"},{"full_name":"Qadami, Salman","first_name":"Salman","last_name":"Qadami"},{"full_name":"Saghafian, Morteza","first_name":"Morteza","id":"f86f7148-b140-11ec-9577-95435b8df824","last_name":"Saghafian"}],"quality_controlled":"1","article_number":"122425","language":[{"iso":"eng"}],"type":"journal_article","_id":"19937","ec_funded":1,"intvolume":"       719","publication_identifier":{"issn":["0020-0255"]},"project":[{"_id":"266A2E9E-B435-11E9-9278-68D0E5697425","grant_number":"788183","call_identifier":"H2020","name":"Alpha Shape Theory Extended"},{"call_identifier":"FWF","name":"Mathematics, Computer Science","_id":"268116B8-B435-11E9-9278-68D0E5697425","grant_number":"Z00342"},{"_id":"2561EBF4-B435-11E9-9278-68D0E5697425","grant_number":"I02979-N35","call_identifier":"FWF","name":"Persistence and stability of geometric complexes"}],"date_created":"2025-06-30T08:48:48Z","corr_author":"1","article_type":"original","external_id":{"isi":["001516170500002"]},"article_processing_charge":"No","title":"Simplet-based signatures and approximation in simplicial complexes: Frequency, degree, and centrality","citation":{"ista":"Mahini M, Beigy H, Qadami S, Saghafian M. 2025. Simplet-based signatures and approximation in simplicial complexes: Frequency, degree, and centrality. Information Sciences. 719(11), 122425.","apa":"Mahini, M., Beigy, H., Qadami, S., &#38; Saghafian, M. (2025). Simplet-based signatures and approximation in simplicial complexes: Frequency, degree, and centrality. <i>Information Sciences</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.ins.2025.122425\">https://doi.org/10.1016/j.ins.2025.122425</a>","chicago":"Mahini, Mohammad, Hamid Beigy, Salman Qadami, and Morteza Saghafian. “Simplet-Based Signatures and Approximation in Simplicial Complexes: Frequency, Degree, and Centrality.” <i>Information Sciences</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.ins.2025.122425\">https://doi.org/10.1016/j.ins.2025.122425</a>.","mla":"Mahini, Mohammad, et al. “Simplet-Based Signatures and Approximation in Simplicial Complexes: Frequency, Degree, and Centrality.” <i>Information Sciences</i>, vol. 719, no. 11, 122425, Elsevier, 2025, doi:<a href=\"https://doi.org/10.1016/j.ins.2025.122425\">10.1016/j.ins.2025.122425</a>.","ieee":"M. Mahini, H. Beigy, S. Qadami, and M. Saghafian, “Simplet-based signatures and approximation in simplicial complexes: Frequency, degree, and centrality,” <i>Information Sciences</i>, vol. 719, no. 11. Elsevier, 2025.","short":"M. Mahini, H. Beigy, S. Qadami, M. Saghafian, Information Sciences 719 (2025).","ama":"Mahini M, Beigy H, Qadami S, Saghafian M. Simplet-based signatures and approximation in simplicial complexes: Frequency, degree, and centrality. <i>Information Sciences</i>. 2025;719(11). doi:<a href=\"https://doi.org/10.1016/j.ins.2025.122425\">10.1016/j.ins.2025.122425</a>"},"oa_version":"None","OA_type":"closed access","month":"11","status":"public","publication_status":"published","doi":"10.1016/j.ins.2025.122425","abstract":[{"lang":"eng","text":"Simplets are elementary units within simplicial complexes and are fundamental for analyzing the structure of simplicial complexes. Previous efforts have mainly focused on accurately counting or approximating the number of simplets rather than studying their frequencies. However, analyzing simplet frequencies is more practical for large-scale simplicial complexes. This paper introduces the Simplet Frequency Distribution (SFD) vector, which enables the analysis of simplet frequencies in simplicial complexes. Additionally, we provide a bound on the sample complexity required to approximate the SFD vector using any uniform sampling-based algorithm accurately. We extend the definition of simplet frequency distribution to encompass simplices, allowing for the analysis of simplet frequencies within simplices of simplicial complexes. This paper introduces the Simplet Degree Vector (SDV) and the Simplet Degree Centrality (SDC), facilitating this analysis for each simplex. Furthermore, we present a bound on the sample complexity required for accurately approximating the SDV and SDC for a set of simplices using any uniform sampling-based algorithm. We also introduce algorithms for approximating SFD, geometric SFD, SDV, and SDC. We also validate the theoretical bounds with experiments on random simplicial complexes and demonstrate the practical application through a case study."}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","day":"01","year":"2025","date_published":"2025-11-01T00:00:00Z","acknowledgement":"The authors would like to thank the anonymous reviewers for their valuable comments and suggestions, which improved this paper.\r\nWork by the first and fourth authors is partially supported by the European Research Council (ERC), grant no. 788183, by the Wittgenstein Prize, Austrian Science Fund (FWF), grant no. Z 342-N31, and by the DFG Collaborative Research Center TRR 109, Austrian Science Fund (FWF), grant no. I 02979-N35.","isi":1,"publication":"Information Sciences","volume":719,"date_updated":"2025-12-30T09:05:32Z"},{"month":"07","status":"public","related_material":{"record":[{"id":"20258","status":"public","relation":"used_in_publication"}]},"citation":{"chicago":"Schanda, Paul. “Arginine Dynamics Probed by Magic-Angle Spinning NMR with a Specific Isotope-Labeling Scheme.” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT-ISTA-19956\">https://doi.org/10.15479/AT-ISTA-19956</a>.","mla":"Schanda, Paul. <i>Arginine Dynamics Probed by Magic-Angle Spinning NMR with a Specific Isotope-Labeling Scheme</i>. Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-19956\">10.15479/AT-ISTA-19956</a>.","ista":"Schanda P. 2025. Arginine Dynamics Probed by Magic-Angle Spinning NMR with a Specific Isotope-Labeling Scheme, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT-ISTA-19956\">10.15479/AT-ISTA-19956</a>.","apa":"Schanda, P. (2025). Arginine Dynamics Probed by Magic-Angle Spinning NMR with a Specific Isotope-Labeling Scheme. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-19956\">https://doi.org/10.15479/AT-ISTA-19956</a>","short":"P. Schanda, (2025).","ama":"Schanda P. Arginine Dynamics Probed by Magic-Angle Spinning NMR with a Specific Isotope-Labeling Scheme. 2025. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-19956\">10.15479/AT-ISTA-19956</a>","ieee":"P. Schanda, “Arginine Dynamics Probed by Magic-Angle Spinning NMR with a Specific Isotope-Labeling Scheme.” Institute of Science and Technology Austria, 2025."},"oa_version":"None","abstract":[{"lang":"eng","text":"The specific introduction of 1H-13C or 1H-15N moieties into otherwise deuterated proteins holds great potential for high-resolution solution and magic-angle spinning (MAS) NMR studies of protein structure and dynamics. Arginine residues play key roles for example at active sites of enzymes. Taking advantage of a chemically synthesized Arg with a 13C-1H2 group in an otherwise deuterated backbone, we demonstrate here the usefulness of proton-detected arginine MAS NMR approaches to probe arginine dynamics. In experiments on crystalline ubiquitin and the 134 kDa tetrameric enzyme malate dehydrogenase we detected a wide range of motions, from sites that are rigid on time scales of at least tens of milliseconds to residues undergoing predominantly nanosecond motions. Spin-relaxation and dipolar-coupling measurements enabled quantitative determination of these dynamics. We observed microsecond dynamics of residue Arg54 in crystalline ubiquitin, whose backbone is known to sample different β-turn conformations on this time scale. The labeling scheme and experiments presented here expand the toolkit for high-resolution proton-detected MAS NMR"}],"doi":"10.15479/AT-ISTA-19956","day":"03","has_accepted_license":"1","year":"2025","user_id":"68b8ca59-c5b3-11ee-8790-cd641c68093d","date_updated":"2025-12-29T14:52:16Z","ddc":["572"],"date_published":"2025-07-03T00:00:00Z","oa":1,"file_date_updated":"2025-08-14T07:06:58Z","author":[{"orcid":"0000-0002-9350-7606","id":"7B541462-FAF6-11E9-A490-E8DFE5697425","last_name":"Schanda","full_name":"Schanda, Paul","first_name":"Paul"}],"publisher":"Institute of Science and Technology Austria","department":[{"_id":"PaSc"}],"project":[{"_id":"eb9c82eb-77a9-11ec-83b8-aadd536561cf","grant_number":"I05812","name":"AlloSpace. The emergence and mechanisms of allostery"}],"type":"research_data","acknowledged_ssus":[{"_id":"NMR"},{"_id":"LifeSc"}],"_id":"19956","tmp":{"name":"Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)","short":"CC BY-NC (4.0)","image":"/images/cc_by_nc.png","legal_code_url":"https://creativecommons.org/licenses/by-nc/4.0/legalcode"},"file":[{"relation":"main_file","date_updated":"2025-07-03T10:30:14Z","checksum":"a2ef61aa9fb5313c7d426913eb0482c0","file_name":"README","access_level":"open_access","file_size":1160,"content_type":"application/octet-stream","success":1,"file_id":"19960","date_created":"2025-07-03T10:30:14Z","creator":"pschanda"},{"relation":"main_file","checksum":"8fb77b96d0fcc95c9903005652207a8c","date_updated":"2025-07-03T10:30:55Z","date_created":"2025-07-03T10:30:55Z","file_id":"19961","success":1,"content_type":"application/zip","access_level":"open_access","file_size":128597184,"file_name":"data_Arg_MASNMR_Rohden.zip","creator":"pschanda"},{"file_name":"20240903_ubi_DN_Argd1C13_2D_spectra.tar.xz","access_level":"open_access","file_size":4766564,"content_type":"application/x-xz","success":1,"file_id":"20172","date_created":"2025-08-14T07:06:58Z","creator":"pschanda","relation":"main_file","date_updated":"2025-08-14T07:06:58Z","checksum":"a60cc16d20b089c4bef94040a99cfba5"}],"date_created":"2025-07-03T04:21:37Z","license":"https://creativecommons.org/licenses/by-nc/4.0/","corr_author":"1","article_processing_charge":"No","title":"Arginine Dynamics Probed by Magic-Angle Spinning NMR with a Specific Isotope-Labeling Scheme","contributor":[{"first_name":"Darja","contributor_type":"researcher","last_name":"Rohden"},{"first_name":"Federico","contributor_type":"researcher","last_name":"Napoli"},{"contributor_type":"researcher","last_name":"Tatman","first_name":"Ben"},{"contributor_type":"researcher","last_name":"Schanda","first_name":"Paul"}]},{"OA_place":"publisher","publication_status":"published","DOAJ_listed":"1","doi":"10.26508/lsa.202503208","abstract":[{"lang":"eng","text":"The acquisition of cellular identity requires large-scale alterations in cellular state. The noncanonical proteasome activator PSME3 is known to regulate diverse cellular processes, but its importance for differentiation remains unclear. Here, we demonstrate that PSME3 binds dynamically to highly active promoters over the course of differentiation. However, loss of PSME3 does not globally affect mRNA transcription. We find instead that PSME3 influences the levels of several adhesion-related proteins and acts upstream of the HSP90 co-chaperone NUDC to regulate cell motility and myoblast differentiation in a proteasome-independent manner. Our findings reveal several new facets of PSME3 functionality and highlight its importance for the differentiation of myogenic cells."}],"PlanS_conform":"1","oa_version":"Published Version","OA_type":"gold","citation":{"apa":"Kuhn, K. D., Cho, U. H., &#38; Hetzer, M. (2025). PSME3 regulates migration and differentiation of myoblasts. <i>Life Science Alliance</i>. Embo Press. <a href=\"https://doi.org/10.26508/lsa.202503208\">https://doi.org/10.26508/lsa.202503208</a>","ista":"Kuhn KD, Cho UH, Hetzer M. 2025. PSME3 regulates migration and differentiation of myoblasts. Life Science Alliance. 8(9), e202503208.","mla":"Kuhn, Kenneth D., et al. “PSME3 Regulates Migration and Differentiation of Myoblasts.” <i>Life Science Alliance</i>, vol. 8, no. 9, e202503208, Embo Press, 2025, doi:<a href=\"https://doi.org/10.26508/lsa.202503208\">10.26508/lsa.202503208</a>.","chicago":"Kuhn, Kenneth D, Ukrae H. Cho, and Martin Hetzer. “PSME3 Regulates Migration and Differentiation of Myoblasts.” <i>Life Science Alliance</i>. Embo Press, 2025. <a href=\"https://doi.org/10.26508/lsa.202503208\">https://doi.org/10.26508/lsa.202503208</a>.","ieee":"K. D. Kuhn, U. H. Cho, and M. Hetzer, “PSME3 regulates migration and differentiation of myoblasts,” <i>Life Science Alliance</i>, vol. 8, no. 9. Embo Press, 2025.","short":"K.D. Kuhn, U.H. Cho, M. Hetzer, Life Science Alliance 8 (2025).","ama":"Kuhn KD, Cho UH, Hetzer M. PSME3 regulates migration and differentiation of myoblasts. <i>Life Science Alliance</i>. 2025;8(9). doi:<a href=\"https://doi.org/10.26508/lsa.202503208\">10.26508/lsa.202503208</a>"},"pmid":1,"month":"09","status":"public","publication":"Life Science Alliance","isi":1,"acknowledgement":"All proteomics analysis was done by the ISTA LSF Mass Spectrometry Service: Ewelina Dutkiewicz-Kopczynska processed the samples (digest and cleanup); Bella Bruszel optimized the acquisition methods, acquired the data, and performed all searches; and Armel Nicolas provided pre- and post-project consulting and post-processed the search results using a development version of their data analysis package, proteoCraft (publication pending). The authors would like to thank Saki for their clarity of thought and insight, as well as Dr. Lorenzo Puri and the members of his laboratory for invaluable discussions relating to the project. This research was further supported by the Lab Support Facility and the Imaging and Optics Facility of ISTA.","oa":1,"file_date_updated":"2025-12-30T09:17:09Z","ddc":["570"],"date_published":"2025-09-01T00:00:00Z","date_updated":"2025-12-30T09:17:55Z","volume":8,"scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","year":"2025","has_accepted_license":"1","day":"01","intvolume":"         8","acknowledged_ssus":[{"_id":"LifeSc"},{"_id":"Bio"}],"_id":"19963","type":"journal_article","language":[{"iso":"eng"}],"publication_identifier":{"eissn":["2575-1077"]},"publisher":"Embo Press","department":[{"_id":"MaHe"}],"issue":"9","quality_controlled":"1","article_number":"e202503208","author":[{"full_name":"Kuhn, Kenneth D","first_name":"Kenneth D","id":"7deed7e0-0133-11f0-8590-c4600b08d0f4","last_name":"Kuhn"},{"last_name":"Cho","full_name":"Cho, Ukrae H.","first_name":"Ukrae H."},{"last_name":"Hetzer","id":"86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed","orcid":"0000-0002-2111-992X","first_name":"Martin W","full_name":"Hetzer, Martin W"}],"external_id":{"pmid":["40537284"],"isi":["001511452100001"]},"article_type":"original","title":"PSME3 regulates migration and differentiation of myoblasts","article_processing_charge":"Yes","corr_author":"1","date_created":"2025-07-06T22:01:22Z","file":[{"creator":"dernst","success":1,"file_id":"20904","date_created":"2025-12-30T09:17:09Z","file_name":"2025_LifeScienceAlliance_Kuhn.pdf","file_size":5471288,"access_level":"open_access","content_type":"application/pdf","checksum":"591d47aa39fc969986c7d3b966890f5f","date_updated":"2025-12-30T09:17:09Z","relation":"main_file"}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"}},{"publication_identifier":{"eissn":["1538-3881"],"issn":["0004-6256"]},"_id":"19964","intvolume":"       170","language":[{"iso":"eng"}],"type":"journal_article","author":[{"last_name":"Cheng","full_name":"Cheng, Sihao","first_name":"Sihao"},{"full_name":"Schlaufman, Kevin C.","first_name":"Kevin C.","last_name":"Schlaufman"},{"id":"8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d","orcid":"0000-0002-4770-5388","last_name":"Caiazzo","full_name":"Caiazzo, Ilaria","first_name":"Ilaria"}],"article_number":"47","quality_controlled":"1","department":[{"_id":"IlCa"}],"publisher":"IOP Publishing","issue":"1","article_processing_charge":"Yes","title":"A candidate giant planet companion to the massive, young White Dwarf GALEX J071816.4+373139 informs the occurrence of giant planets orbiting B stars","article_type":"original","external_id":{"arxiv":["2408.03985"],"isi":["001514518100001"]},"file":[{"relation":"main_file","date_updated":"2025-07-08T06:40:54Z","checksum":"144b0e46aa3dff0cdf8c6ee7d4fe2fe4","content_type":"application/pdf","file_name":"2025_AstronomicalJour_Cheng.pdf","access_level":"open_access","file_size":931173,"date_created":"2025-07-08T06:40:54Z","file_id":"19975","success":1,"creator":"dernst"}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"date_created":"2025-07-06T22:01:22Z","doi":"10.3847/1538-3881/addd21","abstract":[{"text":"It has been suggested that giant planet occurrence peaks for stars with M* ≈ 3 M⊙ at a value a factor of 4 higher than observed for solar-mass stars. This population of giant planets predicted to frequently orbit main-sequence B stars at a ≈ 10 au is difficult to characterize during the few hundred million years while fusion persists in their host stars. By the time those stars become massive, young white dwarfs, any giant planets present would still be luminous as a consequence of their recent formation. From an initial sample of 2195 Gaia-identified massive, young white dwarfs, we use homogeneous Spitzer Infrared Array Camera (IRAC) photometry to search for evidence of unresolved giant planets. For 30 systems, these IRAC data provide sensitivity to objects with M ≲ 10 MJup, and we identify one candidate with M ≈ 4 MJup orbiting the white dwarf GALEX J071816.4+373139. Correcting for the possibility that some of the white dwarfs in our sample result from mergers, we find a giant planet occurrence  n GP = 0.11+0.13-0.07 for stars with initial masses M* ≳ 3 M⊙. Our occurrence inference is consistent with both the Doppler-inferred occurrence of giant planets orbiting M* ≈ 2 M⊙ giant stars and the theoretically predicted factor of 4 enhancement in the occurrence of giant planets orbiting M* ≈ 3 M⊙ stars relative to solar-mass stars. Future James Webb Space Telescope NIRCam observations of our sample would provide sensitivity to Saturn-mass planets and thereby a definitive estimate of the occurrence of giant planets orbiting stars with M* ≳ 3 M⊙.","lang":"eng"}],"OA_place":"publisher","publication_status":"published","DOAJ_listed":"1","month":"07","status":"public","citation":{"short":"S. Cheng, K.C. Schlaufman, I. Caiazzo, The Astronomical Journal 170 (2025).","ama":"Cheng S, Schlaufman KC, Caiazzo I. A candidate giant planet companion to the massive, young White Dwarf GALEX J071816.4+373139 informs the occurrence of giant planets orbiting B stars. <i>The Astronomical Journal</i>. 2025;170(1). doi:<a href=\"https://doi.org/10.3847/1538-3881/addd21\">10.3847/1538-3881/addd21</a>","ieee":"S. Cheng, K. C. Schlaufman, and I. Caiazzo, “A candidate giant planet companion to the massive, young White Dwarf GALEX J071816.4+373139 informs the occurrence of giant planets orbiting B stars,” <i>The Astronomical Journal</i>, vol. 170, no. 1. IOP Publishing, 2025.","mla":"Cheng, Sihao, et al. “A Candidate Giant Planet Companion to the Massive, Young White Dwarf GALEX J071816.4+373139 Informs the Occurrence of Giant Planets Orbiting B Stars.” <i>The Astronomical Journal</i>, vol. 170, no. 1, 47, IOP Publishing, 2025, doi:<a href=\"https://doi.org/10.3847/1538-3881/addd21\">10.3847/1538-3881/addd21</a>.","chicago":"Cheng, Sihao, Kevin C. Schlaufman, and Ilaria Caiazzo. “A Candidate Giant Planet Companion to the Massive, Young White Dwarf GALEX J071816.4+373139 Informs the Occurrence of Giant Planets Orbiting B Stars.” <i>The Astronomical Journal</i>. IOP Publishing, 2025. <a href=\"https://doi.org/10.3847/1538-3881/addd21\">https://doi.org/10.3847/1538-3881/addd21</a>.","apa":"Cheng, S., Schlaufman, K. C., &#38; Caiazzo, I. (2025). A candidate giant planet companion to the massive, young White Dwarf GALEX J071816.4+373139 informs the occurrence of giant planets orbiting B stars. <i>The Astronomical Journal</i>. IOP Publishing. <a href=\"https://doi.org/10.3847/1538-3881/addd21\">https://doi.org/10.3847/1538-3881/addd21</a>","ista":"Cheng S, Schlaufman KC, Caiazzo I. 2025. A candidate giant planet companion to the massive, young White Dwarf GALEX J071816.4+373139 informs the occurrence of giant planets orbiting B stars. The Astronomical Journal. 170(1), 47."},"oa_version":"Published Version","OA_type":"gold","date_updated":"2026-02-19T09:31:41Z","volume":170,"publication":"The Astronomical Journal","isi":1,"acknowledgement":"We thank Jay Farihi, Guangwei Fu, J. J. Hermes, Mary Anne Limbach, and Daniel Thorngren for useful discussions. S.C. thanks Siyu Yao for her constant inspiration and encouragement. S.C. acknowledges the support of the Martin A. and Helen Chooljian Member Fund, funding from the Zurich Insurance Company, and the Fund for Natural Sciences at the Institute for Advanced Study. This work has made use of data from the European Space Agency (ESA) mission Gaia (https://www.cosmos.esa.int/gaia), processed by the Gaia Data Processing and Analysis Consortium (DPAC; https://www.cosmos.esa.int/web/gaia/dpac/consortium). Funding for the DPAC has been provided by national institutions, in particular the institutions participating in the Gaia Multilateral Agreement. This work is based in part on observations made with the Spitzer Space Telescope, which is operated by the Jet Propulsion Laboratory, California Institute of Technology under a contract with NASA. This publication makes use of data products from the Wide-field Infrared Survey Explorer, which is a joint project of the University of California, Los Angeles, and the Jet Propulsion Laboratory/California Institute of Technology, funded by the National Aeronautics and Space Administration. This research has made use of the NASA Exoplanet Archive, which is operated by the California Institute of Technology, under contract with the National Aeronautics and Space Administration under the Exoplanet Exploration Program. This research has made use of NASA’s Astrophysics Data System.\r\nFacilities: ADS - , ESO:VISTA - European Southern Observatory's 4.1 meter Visible and Infrared Survey Telescope for Astronomy, Exoplanet Archive - , Gaia - , IRSA - , NEOWISE - , Spitzer - Spitzer Space Telescope satellite, UKIRT - United Kingdom Infrared Telescope, WISE - Wide-field Infrared Survey Explorer.\r\nSoftware: astropy (Astropy Collaboration et al. 2013, 2018, 2022), numpy (C. R. Harris et al. 2020), matplotlib (J. D. Hunter 2007), R (R Core Team 2024), SciPy (P. Virtanen et al. 2020).","ddc":["520"],"date_published":"2025-07-01T00:00:00Z","arxiv":1,"file_date_updated":"2025-07-08T06:40:54Z","oa":1,"has_accepted_license":"1","year":"2025","day":"01","scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"},{"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","scopus_import":"1","day":"24","has_accepted_license":"1","year":"2025","ddc":["000"],"date_published":"2025-06-24T00:00:00Z","file_date_updated":"2025-07-08T05:52:26Z","oa":1,"isi":1,"publication":"Proceedings of the National Academy of Sciences","acknowledgement":"We gratefully acknowledge the support from the European Research Council (Starting Grant 850529: E-DIRECT) and the Max Planck Society (C.H.), the European Research Council (Consolidator Grant 863818: ForM-SMArt) (K.C.), the Shanghai Pujiang Program (No. 23PJ1405500) (Q.S.), the Army Research Office (Grant No. W911NF-18-1-0325) (N.E.L.), and the John Templeton Foundation (Grant No. 62281) (J.B.P.).","volume":122,"date_updated":"2025-09-30T13:47:14Z","pmid":1,"citation":{"apa":"Mcavoy, A., Sehwag, U. M., Hilbe, C., Chatterjee, K., Barfuss, W., Su, Q., … Plotkin, J. B. (2025). Unilateral incentive alignment in two-agent stochastic games. <i>Proceedings of the National Academy of Sciences</i>. National Academy of Sciences. <a href=\"https://doi.org/10.1073/pnas.2319927121\">https://doi.org/10.1073/pnas.2319927121</a>","ista":"Mcavoy A, Sehwag UM, Hilbe C, Chatterjee K, Barfuss W, Su Q, Leonard NE, Plotkin JB. 2025. Unilateral incentive alignment in two-agent stochastic games. Proceedings of the National Academy of Sciences. 122(25), e2319927121.","mla":"Mcavoy, Alex, et al. “Unilateral Incentive Alignment in Two-Agent Stochastic Games.” <i>Proceedings of the National Academy of Sciences</i>, vol. 122, no. 25, e2319927121, National Academy of Sciences, 2025, doi:<a href=\"https://doi.org/10.1073/pnas.2319927121\">10.1073/pnas.2319927121</a>.","chicago":"Mcavoy, Alex, Udari Madhushani Sehwag, Christian Hilbe, Krishnendu Chatterjee, Wolfram Barfuss, Qi Su, Naomi Ehrich Leonard, and Joshua B. Plotkin. “Unilateral Incentive Alignment in Two-Agent Stochastic Games.” <i>Proceedings of the National Academy of Sciences</i>. National Academy of Sciences, 2025. <a href=\"https://doi.org/10.1073/pnas.2319927121\">https://doi.org/10.1073/pnas.2319927121</a>.","ieee":"A. Mcavoy <i>et al.</i>, “Unilateral incentive alignment in two-agent stochastic games,” <i>Proceedings of the National Academy of Sciences</i>, vol. 122, no. 25. National Academy of Sciences, 2025.","ama":"Mcavoy A, Sehwag UM, Hilbe C, et al. Unilateral incentive alignment in two-agent stochastic games. <i>Proceedings of the National Academy of Sciences</i>. 2025;122(25). doi:<a href=\"https://doi.org/10.1073/pnas.2319927121\">10.1073/pnas.2319927121</a>","short":"A. Mcavoy, U.M. Sehwag, C. Hilbe, K. Chatterjee, W. Barfuss, Q. Su, N.E. Leonard, J.B. Plotkin, Proceedings of the National Academy of Sciences 122 (2025)."},"oa_version":"Published Version","OA_type":"hybrid","status":"public","month":"06","publication_status":"published","OA_place":"publisher","abstract":[{"text":"Multiagent learning is challenging when agents face mixed-motivation interactions, where conflicts of interest arise as agents independently try to optimize their respective outcomes. Recent advancements in evolutionary game theory have identified a class of “zero-determinant” strategies, which confer an agent with significant unilateral control over outcomes in repeated games. Building on these insights, we present a comprehensive generalization of zero-determinant strategies to stochastic games, encompassing dynamic environments. We propose an algorithm that allows an agent to discover strategies enforcing predetermined linear (or approximately linear) payoff relationships. Of particular interest is the relationship in which both payoffs are equal, which serves as a proxy for fairness in symmetric games. We demonstrate that an agent can discover strategies enforcing such relationships through experience alone, without coordinating with an opponent. In finding and using such a strategy, an agent (“enforcer”) can incentivize optimal and equitable outcomes, circumventing potential exploitation. In particular, from the opponent’s viewpoint, the enforcer transforms a mixed-motivation problem into a cooperative problem, paving the way for more collaboration and fairness in multiagent systems.","lang":"eng"}],"doi":"10.1073/pnas.2319927121","date_created":"2025-07-06T22:01:23Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","image":"/images/cc_by_nc_nd.png","short":"CC BY-NC-ND (4.0)","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)"},"file":[{"relation":"main_file","checksum":"3b35befd959a3e37aa9080a64a6afaf3","date_updated":"2025-07-08T05:52:26Z","success":1,"file_id":"19972","date_created":"2025-07-08T05:52:26Z","access_level":"open_access","file_name":"2025_PNAS_McAvoy.pdf","file_size":29525932,"content_type":"application/pdf","creator":"dernst"}],"article_type":"original","external_id":{"pmid":["40523172"],"isi":["001522351900001"]},"article_processing_charge":"Yes (in subscription journal)","title":"Unilateral incentive alignment in two-agent stochastic games","issue":"25","publisher":"National Academy of Sciences","department":[{"_id":"KrCh"}],"author":[{"full_name":"Mcavoy, Alex","first_name":"Alex","last_name":"Mcavoy"},{"first_name":"Udari Madhushani","full_name":"Sehwag, Udari Madhushani","last_name":"Sehwag"},{"last_name":"Hilbe","orcid":"0000-0001-5116-955X","id":"2FDF8F3C-F248-11E8-B48F-1D18A9856A87","first_name":"Christian","full_name":"Hilbe, Christian"},{"last_name":"Chatterjee","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-4561-241X","first_name":"Krishnendu","full_name":"Chatterjee, Krishnendu"},{"last_name":"Barfuss","first_name":"Wolfram","full_name":"Barfuss, Wolfram"},{"first_name":"Qi","full_name":"Su, Qi","last_name":"Su"},{"full_name":"Leonard, Naomi Ehrich","first_name":"Naomi Ehrich","last_name":"Leonard"},{"last_name":"Plotkin","full_name":"Plotkin, Joshua B.","first_name":"Joshua B."}],"article_number":"e2319927121","quality_controlled":"1","language":[{"iso":"eng"}],"type":"journal_article","_id":"19965","intvolume":"       122","ec_funded":1,"publication_identifier":{"eissn":["1091-6490"],"issn":["0027-8424"]},"project":[{"_id":"0599E47C-7A3F-11EA-A408-12923DDC885E","grant_number":"863818","call_identifier":"H2020","name":"Formal Methods for Stochastic Models: Algorithms and Applications"}]},{"article_processing_charge":"Yes","title":"Multiple ionic memories in asymmetric nanochannels revealed by mem-spectrometry","article_type":"original","external_id":{"isi":["001517731700001"]},"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"relation":"main_file","date_updated":"2025-07-08T06:11:59Z","checksum":"e0e11aa01c54b20ee6cdd1f6b999571f","file_size":1296141,"file_name":"2025_NewJourPhysics_Jouveshomme.pdf","access_level":"open_access","content_type":"application/pdf","success":1,"file_id":"19973","date_created":"2025-07-08T06:11:59Z","creator":"dernst"}],"date_created":"2025-07-06T22:01:23Z","publication_identifier":{"eissn":["1367-2630"]},"project":[{"_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","grant_number":"101034413","name":"IST-BRIDGE: International postdoctoral program","call_identifier":"H2020"}],"language":[{"iso":"eng"}],"type":"journal_article","_id":"19966","intvolume":"        27","ec_funded":1,"author":[{"last_name":"Jouveshomme","full_name":"Jouveshomme, Simon","first_name":"Simon"},{"last_name":"Lizée","first_name":"Mathieu","full_name":"Lizée, Mathieu"},{"first_name":"Paul","full_name":"Robin, Paul","last_name":"Robin","orcid":"0000-0002-5728-9189","id":"48c58128-57b0-11ee-9095-dc28fd97fc1d"},{"last_name":"Bocquet","full_name":"Bocquet, Lydéric","first_name":"Lydéric"}],"quality_controlled":"1","article_number":"065001","issue":"6","department":[{"_id":"EdHa"}],"publisher":"IOP Publishing","volume":27,"date_updated":"2025-09-30T13:47:45Z","date_published":"2025-06-01T00:00:00Z","ddc":["530"],"oa":1,"file_date_updated":"2025-07-08T06:11:59Z","publication":"New Journal of Physics","isi":1,"acknowledgement":"The authors acknowledge ERC n-AQUA for funding. S J acknowledges CNRS for funding. The authors thank Hummink for pipette supply and characterization. P R acknowledges funding from the European Union Horizon 2020 research and innovation program under the Marie Skodowska-Curie Grant Agreement No. 101034413.","day":"01","has_accepted_license":"1","year":"2025","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","scopus_import":"1","doi":"10.1088/1367-2630/ade61b","abstract":[{"lang":"eng","text":"Recently discovered nanofluidic memristors, have raised promises for the development of iontronics and neuromorphic computing with ions. Ionic memory effects are related to ion dynamics inside nanochannels, with timescales associated with the manifold physicochemical phenomena occurring at confined interfaces. Here, we explore experimentally the frequency-dependent current–voltage response of model nanochannels—namely glass nanopipettes—to investigate memory effects in ion transport. This characterisation, which we refer to as mem-spectrometry, highlights two characteristic frequencies, associated with short and long timescales of the order of 50 ms and 50 s in the present system. Whereas the former can be associated with ionic diffusion, very long timescales are difficult to explain with conventional transport phenomena. We develop a minimal model accounting for these mem-spectrometry results, pointing to surface charge regulation and ionic adsorption-desorption as possible origins for the long-term memory. Our work demonstrates the relevance of mem-spectrometry to highlight subtle ion transport properties in nanochannels, giving hereby new insights on the mechanisms governing ion transport and current rectification in charged conical nanopores."}],"DOAJ_listed":"1","publication_status":"published","OA_place":"publisher","status":"public","month":"06","citation":{"ieee":"S. Jouveshomme, M. Lizée, P. Robin, and L. Bocquet, “Multiple ionic memories in asymmetric nanochannels revealed by mem-spectrometry,” <i>New Journal of Physics</i>, vol. 27, no. 6. IOP Publishing, 2025.","ama":"Jouveshomme S, Lizée M, Robin P, Bocquet L. Multiple ionic memories in asymmetric nanochannels revealed by mem-spectrometry. <i>New Journal of Physics</i>. 2025;27(6). doi:<a href=\"https://doi.org/10.1088/1367-2630/ade61b\">10.1088/1367-2630/ade61b</a>","short":"S. Jouveshomme, M. Lizée, P. Robin, L. Bocquet, New Journal of Physics 27 (2025).","apa":"Jouveshomme, S., Lizée, M., Robin, P., &#38; Bocquet, L. (2025). Multiple ionic memories in asymmetric nanochannels revealed by mem-spectrometry. <i>New Journal of Physics</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/1367-2630/ade61b\">https://doi.org/10.1088/1367-2630/ade61b</a>","ista":"Jouveshomme S, Lizée M, Robin P, Bocquet L. 2025. Multiple ionic memories in asymmetric nanochannels revealed by mem-spectrometry. New Journal of Physics. 27(6), 065001.","mla":"Jouveshomme, Simon, et al. “Multiple Ionic Memories in Asymmetric Nanochannels Revealed by Mem-Spectrometry.” <i>New Journal of Physics</i>, vol. 27, no. 6, 065001, IOP Publishing, 2025, doi:<a href=\"https://doi.org/10.1088/1367-2630/ade61b\">10.1088/1367-2630/ade61b</a>.","chicago":"Jouveshomme, Simon, Mathieu Lizée, Paul Robin, and Lydéric Bocquet. “Multiple Ionic Memories in Asymmetric Nanochannels Revealed by Mem-Spectrometry.” <i>New Journal of Physics</i>. IOP Publishing, 2025. <a href=\"https://doi.org/10.1088/1367-2630/ade61b\">https://doi.org/10.1088/1367-2630/ade61b</a>."},"OA_type":"gold","oa_version":"Published Version"},{"status":"public","month":"06","OA_type":"diamond","oa_version":"Published Version","citation":{"ieee":"M. Llerena <i>et al.</i>, “The ionizing photon production efficiency of star-forming galaxies at z ∼ 4–10,” <i>Astronomy &#38; Astrophysics</i>, vol. 698. EDP Sciences, 2025.","short":"M. Llerena, L. Pentericci, L. Napolitano, S. Mascia, R. Amorín, A. Calabrò, M. Castellano, N.J. Cleri, M. Giavalisco, N.A. Grogin, N.P. Hathi, M. Hirschmann, A.M. Koekemoer, T. Nanayakkara, F. Pacucci, L. Shen, S.M. Wilkins, I. Yoon, L.Y.A. Yung, R. Bhatawdekar, R.A. Lucas, X. Wang, P. Arrabal Haro, M.B. Bagley, S.L. Finkelstein, J.S. Kartaltepe, E. Merlin, C. Papovich, N. Pirzkal, P. Santini, Astronomy &#38; Astrophysics 698 (2025).","ama":"Llerena M, Pentericci L, Napolitano L, et al. The ionizing photon production efficiency of star-forming galaxies at z ∼ 4–10. <i>Astronomy &#38; Astrophysics</i>. 2025;698. doi:<a href=\"https://doi.org/10.1051/0004-6361/202453251\">10.1051/0004-6361/202453251</a>","ista":"Llerena M, Pentericci L, Napolitano L, Mascia S, Amorín R, Calabrò A, Castellano M, Cleri NJ, Giavalisco M, Grogin NA, Hathi NP, Hirschmann M, Koekemoer AM, Nanayakkara T, Pacucci F, Shen L, Wilkins SM, Yoon I, Yung LYA, Bhatawdekar R, Lucas RA, Wang X, Arrabal Haro P, Bagley MB, Finkelstein SL, Kartaltepe JS, Merlin E, Papovich C, Pirzkal N, Santini P. 2025. The ionizing photon production efficiency of star-forming galaxies at z ∼ 4–10. Astronomy &#38; Astrophysics. 698, A302.","apa":"Llerena, M., Pentericci, L., Napolitano, L., Mascia, S., Amorín, R., Calabrò, A., … Santini, P. (2025). The ionizing photon production efficiency of star-forming galaxies at z ∼ 4–10. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a href=\"https://doi.org/10.1051/0004-6361/202453251\">https://doi.org/10.1051/0004-6361/202453251</a>","chicago":"Llerena, M., L. Pentericci, L. Napolitano, Sara Mascia, R. Amorín, A. Calabrò, M. Castellano, et al. “The Ionizing Photon Production Efficiency of Star-Forming Galaxies at z ∼ 4–10.” <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2025. <a href=\"https://doi.org/10.1051/0004-6361/202453251\">https://doi.org/10.1051/0004-6361/202453251</a>.","mla":"Llerena, M., et al. “The Ionizing Photon Production Efficiency of Star-Forming Galaxies at z ∼ 4–10.” <i>Astronomy &#38; Astrophysics</i>, vol. 698, A302, EDP Sciences, 2025, doi:<a href=\"https://doi.org/10.1051/0004-6361/202453251\">10.1051/0004-6361/202453251</a>."},"abstract":[{"text":"Context. Investigating the ionizing emission of star-forming galaxies and the escape fraction of ionizing photons is critical to understanding their contribution to reionization and their impact on the surrounding environment. The number of ionizing photons available to reionize the intergalactic medium (IGM) depends on not only the abundance of galaxies but also their efficiency in producing ionizing photons (ξion). This quantity is thus fundamental to quantify the role of faint versus bright sources in driving this process, as we must assess their relative contribution to the total ionizing emissivity.\r\n\r\nAims. Our goal is to estimate the ξion using Balmer lines (Hα or Hβ) in a sample of 761 galaxies at 4 ≤ z ≤ 10 selected from different JWST spectroscopic surveys. We aim to determine the redshift evolution of ξion and the relation of ξion with the physical properties of the galaxies.\r\n\r\nMethods. We used the available HST and JWST photometry to perform a spectral energy distribution (SED) fitting in the sample to determine their physical properties and relate them with ξion. We used the BAGPIPES code for the SED fitting and assumed a delayed exponential model for the star formation history. We used the NIRSpec spectra from prism or grating configurations to estimate Balmer luminosities, and then constrained ξion values after dust correction.\r\n\r\nResults. We find a mean value of 1025.22 Hz erg−1 for ξion in the sample with an observed scatter of 0.42 dex. We find an increase in the median values of ξion with redshift from 1025.09 Hz erg−1 at z ∼ 4.18 to 1025.28 Hz erg−1 at z ∼ 7.14, confirming the redshift evolution of ξion found in other studies. Regarding the relation between ξion and physical properties, we find a decrease in ξion with increasing stellar mass, indicating that low-mass galaxies are efficient producers of ionizing photons. We also find an increase in ξion with increasing specific star formation rate (sSFR) and increasing UV absolute magnitude. This indicates that faint galaxies and galaxies with high sSFR are also efficient producers. We also investigated the relation of ξion with the rest-frame equivalent width (EW) of [OIII]λ5007 and find that galaxies with the higher EW([OIII]λ5007) are more efficient producers of ionizing photons, with the best fit leading to the relation log(ξion)  =  0.43 × log(EW[OIII])+23.99. Similarly, we find that galaxies with higher O32 = [OIII]λ5007/[OII]λλ3727,3729 and lower gas-phase metallicities (based on the R23 = ([OIII]λλ4959,5007+[OII]λλ3727,3729)/Hβ calibration) show higher ξion values.","lang":"eng"}],"doi":"10.1051/0004-6361/202453251","publication_status":"published","OA_place":"publisher","year":"2025","has_accepted_license":"1","day":"20","scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_updated":"2026-02-16T12:12:15Z","volume":698,"publication":"Astronomy & Astrophysics","isi":1,"acknowledgement":"We thank the anonymous referee for the detailed review and useful suggestions that helped to improve this paper. We wish to thank all our colleagues in the CEERS collaboration for their hard work and valuable contributions to this project. We thank Pietro Bergamini for providing us with the magnification factors for the lensed sources. MLl acknowledges support from the INAF Large Grant 2022 “Extragalactic Surveys with JWST” (PI L. Pentericci), the PRIN 2022 MUR project 2022CB3PJ3 – First Light And Galaxy aSsembly (FLAGS) funded by the European Union – Next Generation EU, and INAF Mini-grant “Galaxies in the epoch of Reionization and their analogs at lower redshift” (PI M. Llerena). RA acknowledges support of grant PID2023-147386NB-I00 funded by MICIU/AEI/10.13039/501100011033 and by ERDF/EU, and the Severo Ochoa grant CEX2021-001131-S This work is based on observations made with the NASA/ESA/CSA James Webb Space Telescope (JWST). The JWST data presented in this article were obtained from the Mikulski Archive for Space Telescopes (MAST) at the Space Telescope Science Institute. The specific observations analyzed are associated with program JWST-GO-3073 and can be accessed via DOI. We acknowledge support from INAF Mini-grant “Reionization and Fundamental Cosmology with High-Redshift Galaxies”. This work has made extensive use of Python packages astropy (Astropy Collaboration 2018), numpy (Harris et al. 2020), Matplotlib (Hunter 2007) and LiMe (Fernández et al. 2024).","file_date_updated":"2025-07-08T06:17:02Z","oa":1,"date_published":"2025-06-20T00:00:00Z","arxiv":1,"ddc":["520"],"article_number":"A302","quality_controlled":"1","author":[{"full_name":"Llerena, M.","first_name":"M.","last_name":"Llerena"},{"last_name":"Pentericci","full_name":"Pentericci, L.","first_name":"L."},{"last_name":"Napolitano","first_name":"L.","full_name":"Napolitano, L."},{"id":"edaf889c-c7cd-11ef-ab1b-bb28c431bd29","last_name":"Mascia","full_name":"Mascia, Sara","first_name":"Sara"},{"full_name":"Amorín, R.","first_name":"R.","last_name":"Amorín"},{"first_name":"A.","full_name":"Calabrò, A.","last_name":"Calabrò"},{"last_name":"Castellano","full_name":"Castellano, M.","first_name":"M."},{"last_name":"Cleri","first_name":"N. J.","full_name":"Cleri, N. J."},{"last_name":"Giavalisco","first_name":"M.","full_name":"Giavalisco, M."},{"last_name":"Grogin","full_name":"Grogin, N. A.","first_name":"N. A."},{"first_name":"N. P.","full_name":"Hathi, N. P.","last_name":"Hathi"},{"last_name":"Hirschmann","first_name":"M.","full_name":"Hirschmann, M."},{"full_name":"Koekemoer, A. M.","first_name":"A. M.","last_name":"Koekemoer"},{"first_name":"T.","full_name":"Nanayakkara, T.","last_name":"Nanayakkara"},{"last_name":"Pacucci","full_name":"Pacucci, F.","first_name":"F."},{"last_name":"Shen","first_name":"L.","full_name":"Shen, L."},{"last_name":"Wilkins","first_name":"S. M.","full_name":"Wilkins, S. M."},{"last_name":"Yoon","first_name":"I.","full_name":"Yoon, I."},{"last_name":"Yung","first_name":"L. Y.A.","full_name":"Yung, L. Y.A."},{"first_name":"R.","full_name":"Bhatawdekar, R.","last_name":"Bhatawdekar"},{"first_name":"R. A.","full_name":"Lucas, R. A.","last_name":"Lucas"},{"last_name":"Wang","full_name":"Wang, X.","first_name":"X."},{"last_name":"Arrabal Haro","full_name":"Arrabal Haro, P.","first_name":"P."},{"last_name":"Bagley","first_name":"M. B.","full_name":"Bagley, M. B."},{"first_name":"S. L.","full_name":"Finkelstein, S. L.","last_name":"Finkelstein"},{"last_name":"Kartaltepe","full_name":"Kartaltepe, J. S.","first_name":"J. S."},{"full_name":"Merlin, E.","first_name":"E.","last_name":"Merlin"},{"last_name":"Papovich","full_name":"Papovich, C.","first_name":"C."},{"first_name":"N.","full_name":"Pirzkal, N.","last_name":"Pirzkal"},{"full_name":"Santini, P.","first_name":"P.","last_name":"Santini"}],"publisher":"EDP Sciences","department":[{"_id":"JoMa"}],"publication_identifier":{"eissn":["1432-0746"],"issn":["0004-6361"]},"intvolume":"       698","_id":"19967","type":"journal_article","language":[{"iso":"eng"}],"file":[{"creator":"dernst","access_level":"open_access","file_name":"2025_AstronomyAstrophysics_Llerena.pdf","file_size":7557993,"content_type":"application/pdf","file_id":"19974","success":1,"date_created":"2025-07-08T06:17:02Z","date_updated":"2025-07-08T06:17:02Z","checksum":"92745034d9448d38b6b0394407ae39a0","relation":"main_file"}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"date_created":"2025-07-06T22:01:23Z","title":"The ionizing photon production efficiency of star-forming galaxies at z ∼ 4–10","article_processing_charge":"No","external_id":{"isi":["001512479700026"],"arxiv":["2412.01358"]},"article_type":"original"},{"issue":"1","OA_type":"closed access","publisher":"Academy of Management","department":[{"_id":"CaMu"}],"oa_version":"None","citation":{"ieee":"C. Plata and A. Casallas Garcia, “Machine learning analysis of the factors influencing university-industry collaborations,” in <i>85th Annual Meeting of the Academy of Management</i>, Copenhagen, Denmark, 2025, vol. 2025, no. 1.","short":"C. Plata, A. Casallas Garcia, in:, 85th Annual Meeting of the Academy of Management, Academy of Management, 2025.","ama":"Plata C, Casallas Garcia A. Machine learning analysis of the factors influencing university-industry collaborations. In: <i>85th Annual Meeting of the Academy of Management</i>. Vol 2025. Academy of Management; 2025. doi:<a href=\"https://doi.org/10.5465/AMPROC.2025.54bp\">10.5465/AMPROC.2025.54bp</a>","apa":"Plata, C., &#38; Casallas Garcia, A. (2025). Machine learning analysis of the factors influencing university-industry collaborations. In <i>85th Annual Meeting of the Academy of Management</i> (Vol. 2025). Copenhagen, Denmark: Academy of Management. <a href=\"https://doi.org/10.5465/AMPROC.2025.54bp\">https://doi.org/10.5465/AMPROC.2025.54bp</a>","ista":"Plata C, Casallas Garcia A. 2025. Machine learning analysis of the factors influencing university-industry collaborations. 85th Annual Meeting of the Academy of Management. AOM: Annual Meeting of the Academy of Management vol. 2025.","mla":"Plata, Carlos, and Alejandro Casallas Garcia. “Machine Learning Analysis of the Factors Influencing University-Industry Collaborations.” <i>85th Annual Meeting of the Academy of Management</i>, vol. 2025, no. 1, Academy of Management, 2025, doi:<a href=\"https://doi.org/10.5465/AMPROC.2025.54bp\">10.5465/AMPROC.2025.54bp</a>.","chicago":"Plata, Carlos, and Alejandro Casallas Garcia. “Machine Learning Analysis of the Factors Influencing University-Industry Collaborations.” In <i>85th Annual Meeting of the Academy of Management</i>, Vol. 2025. Academy of Management, 2025. <a href=\"https://doi.org/10.5465/AMPROC.2025.54bp\">https://doi.org/10.5465/AMPROC.2025.54bp</a>."},"status":"public","month":"06","quality_controlled":"1","author":[{"last_name":"Plata","full_name":"Plata, Carlos","first_name":"Carlos"},{"id":"92081129-2d75-11ef-a48d-b04dd7a2385a","orcid":"0000-0002-1988-5035","last_name":"Casallas Garcia","full_name":"Casallas Garcia, Alejandro","first_name":"Alejandro"}],"type":"conference","language":[{"iso":"eng"}],"intvolume":"      2025","publication_status":"published","_id":"19968","publication_identifier":{"eissn":["2151-6561"],"issn":["0065-0668"]},"abstract":[{"lang":"eng","text":"In the dynamic arena of innovation, the relations between academia and industry are a keystone for breakthroughs and practical applications. Yet, the groundwork of these pivotal University-Industry (U-I) partnerships remains covered in complexity. This paper delves into these intricate relations, unraveling the factors that help successful collaborations. Grounded in the Resource-Based Theory, our study transcends traditional analytical boundaries, leveraging a neural network model to understand a comprehensive dataset from the UK’s Higher Education Statistics Agency, SCIMAGO Rankings, and Clarivate Publications. This novel approach helps to make clear the interplay of academic load, administrative support, scientific output, and university rank in sculpting U-I collaboration dynamics. Our findings suggest that reduced academic load and robust administrative support significantly bolster U-I collaborations. However, the influence of scientific output and university ranking is more nuanced, challenging the common belief. High scientific output, while indicative of expertise, doesn't always align with industry goals. Similarly, while higher-ranked universities could attract more collaborations, the benefits are not universal. This paper not only contributes to a deeper understanding of U-I collaborations, but also provides actionable insights for university administrators, policymakers, and industry leaders. In a world where innovation is key, understanding these collaborative dynamics is crucial for fostering partnerships that push the boundaries of research and practical application."}],"doi":"10.5465/AMPROC.2025.54bp","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2025-07-06T22:01:23Z","scopus_import":"1","day":"17","year":"2025","conference":{"name":"AOM: Annual Meeting of the Academy of Management","location":"Copenhagen, Denmark","end_date":"2025-07-29","start_date":"2025-07-25"},"date_published":"2025-06-17T00:00:00Z","publication":"85th Annual Meeting of the Academy of Management","title":"Machine learning analysis of the factors influencing university-industry collaborations","volume":2025,"article_processing_charge":"No","date_updated":"2025-09-09T08:39:03Z"},{"arxiv":1,"ddc":["510"],"date_published":"2025-09-01T00:00:00Z","file_date_updated":"2025-12-30T09:03:55Z","oa":1,"acknowledgement":"We thank all anonymous reviewers for their helpful comments. We would also like to thank Jakob Solnerzik and Olivier Stietel for catching some errors in the proofs. Open Access funding enabled and organized by Projekt DEAL. We gratefully acknowledge funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (grant agreement No 805223 ScaleML).","isi":1,"publication":"Distributed Computing","volume":38,"date_updated":"2025-12-30T09:04:18Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","day":"01","has_accepted_license":"1","year":"2025","publication_status":"published","page":"207-245","OA_place":"publisher","PlanS_conform":"1","abstract":[{"lang":"eng","text":"In the stochastic population protocol model, we are given a connected graph with n nodes, and in every time step, a scheduler samples an edge of the graph uniformly at random and the nodes connected by this edge interact. A fundamental task in this model is stable leader election, in which all nodes start in an identical state and the aim is to reach a configuration in which (1)\r\nexactly one node is elected as leader and (2) this node remains as the unique leader no matter what sequence of interactions follows. On cliques, the complexity of this problem has recently been settled: time-optimal protocols stabilize in (n log n) expected steps using (log log n) states, whereas protocols that use O(1) states require (n2) expected steps. In this work, we investigate the complexity of stable leader election on graphs. We provide the first non-trivial time lower bounds on general graphs, showing that, when moving beyond cliques, the complexity of stable leader election can range from O(1) to (n3) expected steps. We describe a protocol that is time-optimal on many graph families, but uses polynomially-many states. In contrast, we give a near-time-optimal protocol that uses only O(log2 n) states that is at most a factor O(log n) slower. Finally, we observe that for many graphs the constant-state protocol of Beauquier et al. [OPODIS 2013] is at most a factor O(n log n) slower than the fast polynomial-state protocol, and among constant-state protocols, this protocol has near-optimal average case complexity on dense random graphs."}],"doi":"10.1007/s00446-025-00487-7","citation":{"mla":"Alistarh, Dan-Adrian, et al. “Near-Optimal Leader Election in Population Protocols on Graphs.” <i>Distributed Computing</i>, vol. 38, Springer Nature, 2025, pp. 207–45, doi:<a href=\"https://doi.org/10.1007/s00446-025-00487-7\">10.1007/s00446-025-00487-7</a>.","chicago":"Alistarh, Dan-Adrian, Joel Rybicki, and Sasha Voitovych. “Near-Optimal Leader Election in Population Protocols on Graphs.” <i>Distributed Computing</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s00446-025-00487-7\">https://doi.org/10.1007/s00446-025-00487-7</a>.","apa":"Alistarh, D.-A., Rybicki, J., &#38; Voitovych, S. (2025). Near-optimal leader election in population protocols on graphs. <i>Distributed Computing</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00446-025-00487-7\">https://doi.org/10.1007/s00446-025-00487-7</a>","ista":"Alistarh D-A, Rybicki J, Voitovych S. 2025. Near-optimal leader election in population protocols on graphs. Distributed Computing. 38, 207–245.","ama":"Alistarh D-A, Rybicki J, Voitovych S. Near-optimal leader election in population protocols on graphs. <i>Distributed Computing</i>. 2025;38:207-245. doi:<a href=\"https://doi.org/10.1007/s00446-025-00487-7\">10.1007/s00446-025-00487-7</a>","short":"D.-A. Alistarh, J. Rybicki, S. Voitovych, Distributed Computing 38 (2025) 207–245.","ieee":"D.-A. Alistarh, J. Rybicki, and S. Voitovych, “Near-optimal leader election in population protocols on graphs,” <i>Distributed Computing</i>, vol. 38. Springer Nature, pp. 207–245, 2025."},"OA_type":"hybrid","oa_version":"Published Version","month":"09","status":"public","related_material":{"record":[{"id":"11844","status":"public","relation":"earlier_version"}]},"article_type":"original","external_id":{"arxiv":["2205.12597"],"isi":["001518300400001"]},"article_processing_charge":"Yes (via OA deal)","title":"Near-optimal leader election in population protocols on graphs","date_created":"2025-07-06T22:01:24Z","corr_author":"1","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"creator":"dernst","file_size":770705,"access_level":"open_access","file_name":"2025_DistributedComp_Alistarh.pdf","content_type":"application/pdf","success":1,"file_id":"20900","date_created":"2025-12-30T09:03:55Z","date_updated":"2025-12-30T09:03:55Z","checksum":"2789c0fdfb58f64930f05f6ac2b3ca61","relation":"main_file"}],"language":[{"iso":"eng"}],"type":"journal_article","_id":"19969","intvolume":"        38","ec_funded":1,"publication_identifier":{"issn":["0178-2770"],"eissn":["1432-0452"]},"project":[{"_id":"268A44D6-B435-11E9-9278-68D0E5697425","grant_number":"805223","name":"Elastic Coordination for Scalable Machine Learning","call_identifier":"H2020"}],"department":[{"_id":"DaAl"}],"publisher":"Springer Nature","author":[{"last_name":"Alistarh","id":"4A899BFC-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-3650-940X","first_name":"Dan-Adrian","full_name":"Alistarh, Dan-Adrian"},{"full_name":"Rybicki, Joel","first_name":"Joel","orcid":"0000-0002-6432-6646","id":"334EFD2E-F248-11E8-B48F-1D18A9856A87","last_name":"Rybicki"},{"first_name":"Sasha","full_name":"Voitovych, Sasha","last_name":"Voitovych"}],"quality_controlled":"1"},{"oa":1,"date_published":"2025-01-07T00:00:00Z","arxiv":1,"acknowledgement":"This project has received funding from the European Research Council (ERC) under the European Union’sHorizon 2020 research and innovation programme (MoDynStruct, No. 101019564) and the Austrian Science Fund(FWF) grant DOI 10.55776/Z422, grant DOI 10.55776/I5982, and grant DOI 10.55776/P33775 with additional funding from the netidee SCIENCE Stiftung, 2020–2024.","publication":"Proceedings of the 2025 Annual ACM-SIAM Symposium on Discrete Algorithms","date_updated":"2025-12-29T12:30:04Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","day":"07","year":"2025","conference":{"start_date":"2025-01-12","end_date":"2025-01-15","location":"New Orleans, LA, United States","name":"SODA: Symposium on Discrete Algorithms"},"OA_place":"repository","page":"750-784","publication_status":"published","abstract":[{"text":"Dynamically maintaining the minimum cut in a graph G under edge insertions and deletion is a fundamental problem in dynamic graph algorithms for which no conditional lower bound on the time per operation exists. In an n-node graph the best known (1 + o (1))-approximate algorithm takes  update time [14]. If the minimum cut is guaranteed to be (log n )o (1), a deterministic exact algorithm with n o (1) update time exists [8].\r\nWe present the first fully dynamic algorithm for (1 + o (1))-approximate minimum cut with n o(1) update time. Our main technical contribution is to show that it suffices to consider small-volume cuts in suitably contracted graphs.","lang":"eng"}],"doi":"10.1137/1.9781611978322.22","OA_type":"green","oa_version":"Preprint","citation":{"ista":"El-Hayek A, Henzinger M, Li J. 2025. Fully dynamic approximate minimum cut in subpolynomial time per operation. Proceedings of the 2025 Annual ACM-SIAM Symposium on Discrete Algorithms. SODA: Symposium on Discrete Algorithms, 750–784.","apa":"El-Hayek, A., Henzinger, M., &#38; Li, J. (2025). Fully dynamic approximate minimum cut in subpolynomial time per operation. In <i>Proceedings of the 2025 Annual ACM-SIAM Symposium on Discrete Algorithms</i> (pp. 750–784). New Orleans, LA, United States: Society for Industrial and Applied Mathematics. <a href=\"https://doi.org/10.1137/1.9781611978322.22\">https://doi.org/10.1137/1.9781611978322.22</a>","chicago":"El-Hayek, Antoine, Monika Henzinger, and Jason Li. “Fully Dynamic Approximate Minimum Cut in Subpolynomial Time per Operation.” In <i>Proceedings of the 2025 Annual ACM-SIAM Symposium on Discrete Algorithms</i>, 750–84. Society for Industrial and Applied Mathematics, 2025. <a href=\"https://doi.org/10.1137/1.9781611978322.22\">https://doi.org/10.1137/1.9781611978322.22</a>.","mla":"El-Hayek, Antoine, et al. “Fully Dynamic Approximate Minimum Cut in Subpolynomial Time per Operation.” <i>Proceedings of the 2025 Annual ACM-SIAM Symposium on Discrete Algorithms</i>, Society for Industrial and Applied Mathematics, 2025, pp. 750–84, doi:<a href=\"https://doi.org/10.1137/1.9781611978322.22\">10.1137/1.9781611978322.22</a>.","ieee":"A. El-Hayek, M. Henzinger, and J. Li, “Fully dynamic approximate minimum cut in subpolynomial time per operation,” in <i>Proceedings of the 2025 Annual ACM-SIAM Symposium on Discrete Algorithms</i>, New Orleans, LA, United States, 2025, pp. 750–784.","ama":"El-Hayek A, Henzinger M, Li J. Fully dynamic approximate minimum cut in subpolynomial time per operation. In: <i>Proceedings of the 2025 Annual ACM-SIAM Symposium on Discrete Algorithms</i>. Society for Industrial and Applied Mathematics; 2025:750-784. doi:<a href=\"https://doi.org/10.1137/1.9781611978322.22\">10.1137/1.9781611978322.22</a>","short":"A. El-Hayek, M. Henzinger, J. Li, in:, Proceedings of the 2025 Annual ACM-SIAM Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics, 2025, pp. 750–784."},"month":"01","status":"public","external_id":{"arxiv":["2412.15069"]},"title":"Fully dynamic approximate minimum cut in subpolynomial time per operation","article_processing_charge":"No","date_created":"2025-07-10T13:08:57Z","corr_author":"1","type":"conference","language":[{"iso":"eng"}],"ec_funded":1,"_id":"19982","publication_identifier":{"eisbn":["9781611978322"]},"project":[{"_id":"bd9ca328-d553-11ed-ba76-dc4f890cfe62","grant_number":"101019564","name":"The design and evaluation of modern fully dynamic data structures","call_identifier":"H2020"},{"name":"Efficient algorithms","_id":"34def286-11ca-11ed-8bc3-da5948e1613c","grant_number":"Z00422"},{"_id":"bda196b2-d553-11ed-ba76-8e8ee6c21103","grant_number":"I05982","name":"Static and Dynamic Hierarchical Graph Decompositions"},{"name":"Fast Algorithms for a Reactive Network Layer","grant_number":"P33775","_id":"bd9e3a2e-d553-11ed-ba76-8aa684ce17fe"}],"department":[{"_id":"MoHe"}],"publisher":"Society for Industrial and Applied Mathematics","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2412.15069","open_access":"1"}],"quality_controlled":"1","author":[{"full_name":"El-Hayek, Antoine","first_name":"Antoine","orcid":"0000-0003-4268-7368","id":"888a098e-fcac-11ee-aff7-d347be57b725","last_name":"El-Hayek"},{"full_name":"Henzinger, Monika H","first_name":"Monika H","orcid":"0000-0002-5008-6530","id":"540c9bbd-f2de-11ec-812d-d04a5be85630","last_name":"Henzinger"},{"last_name":"Li","first_name":"Jason","full_name":"Li, Jason"}]}]
