[{"file_date_updated":"2023-07-31T08:44:38Z","has_accepted_license":"1","article_processing_charge":"No","language":[{"iso":"eng"}],"status":"public","date_updated":"2023-12-13T11:39:32Z","title":"Magnetic impurity in a one-dimensional few-fermion system","author":[{"first_name":"Lukas","full_name":"Rammelmüller, Lukas","last_name":"Rammelmüller"},{"full_name":"Huber, David","last_name":"Huber","first_name":"David"},{"full_name":"Čufar, Matija","last_name":"Čufar","first_name":"Matija"},{"first_name":"Joachim","last_name":"Brand","full_name":"Brand, Joachim"},{"first_name":"Hans-Werner","last_name":"Hammer","full_name":"Hammer, Hans-Werner"},{"full_name":"Volosniev, Artem","last_name":"Volosniev","id":"37D278BC-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-0393-5525","first_name":"Artem"}],"keyword":["General Physics and Astronomy"],"oa_version":"Published Version","ddc":["530"],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","arxiv":1,"publication":"SciPost Physics","isi":1,"year":"2023","publication_identifier":{"issn":["2542-4653"]},"article_type":"original","article_number":"006","intvolume":" 14","date_published":"2023-01-24T00:00:00Z","day":"24","doi":"10.21468/scipostphys.14.1.006","file":[{"access_level":"open_access","file_name":"2023_SciPostPhysics_Rammelmueller.pdf","success":1,"date_created":"2023-07-31T08:44:38Z","file_size":1163444,"creator":"dernst","relation":"main_file","content_type":"application/pdf","checksum":"ffdb70b9ae7aa45ea4ea6096ecbd6431","file_id":"13328","date_updated":"2023-07-31T08:44:38Z"}],"oa":1,"scopus_import":"1","issue":"1","month":"01","_id":"13278","external_id":{"arxiv":["2204.01606"],"isi":["001000325800008"]},"date_created":"2023-07-24T10:48:23Z","publication_status":"published","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"publisher":"SciPost Foundation","department":[{"_id":"MiLe"}],"volume":14,"quality_controlled":"1","type":"journal_article","abstract":[{"lang":"eng","text":"We present a numerical analysis of spin-1/2 fermions in a one-dimensional harmonic potential in the presence of a magnetic point-like impurity at the center of the trap. The model represents a few-body analogue of a magnetic impurity in the vicinity of an s-wave superconductor. Already for a few particles we find a ground-state level crossing between sectors with different fermion parities. We interpret this crossing as a few-body precursor of a quantum phase transition, which occurs when the impurity \"breaks\" a Cooper pair. This picture is further corroborated by analyzing density-density correlations in momentum space. Finally, we discuss how the system may be realized with existing cold-atoms platforms."}],"citation":{"short":"L. Rammelmüller, D. Huber, M. Čufar, J. Brand, H.-W. Hammer, A. Volosniev, SciPost Physics 14 (2023).","ama":"Rammelmüller L, Huber D, Čufar M, Brand J, Hammer H-W, Volosniev A. Magnetic impurity in a one-dimensional few-fermion system. SciPost Physics. 2023;14(1). doi:10.21468/scipostphys.14.1.006","ieee":"L. Rammelmüller, D. Huber, M. Čufar, J. Brand, H.-W. Hammer, and A. Volosniev, “Magnetic impurity in a one-dimensional few-fermion system,” SciPost Physics, vol. 14, no. 1. SciPost Foundation, 2023.","apa":"Rammelmüller, L., Huber, D., Čufar, M., Brand, J., Hammer, H.-W., & Volosniev, A. (2023). Magnetic impurity in a one-dimensional few-fermion system. SciPost Physics. SciPost Foundation. https://doi.org/10.21468/scipostphys.14.1.006","ista":"Rammelmüller L, Huber D, Čufar M, Brand J, Hammer H-W, Volosniev A. 2023. Magnetic impurity in a one-dimensional few-fermion system. SciPost Physics. 14(1), 006.","chicago":"Rammelmüller, Lukas, David Huber, Matija Čufar, Joachim Brand, Hans-Werner Hammer, and Artem Volosniev. “Magnetic Impurity in a One-Dimensional Few-Fermion System.” SciPost Physics. SciPost Foundation, 2023. https://doi.org/10.21468/scipostphys.14.1.006.","mla":"Rammelmüller, Lukas, et al. “Magnetic Impurity in a One-Dimensional Few-Fermion System.” SciPost Physics, vol. 14, no. 1, 006, SciPost Foundation, 2023, doi:10.21468/scipostphys.14.1.006."}},{"date_published":"2023-07-05T00:00:00Z","intvolume":" 261","oa":1,"file":[{"checksum":"5d4c8932ef3450615a53b9bb15d92eb2","content_type":"application/pdf","relation":"main_file","date_updated":"2023-07-24T15:11:05Z","file_id":"13293","access_level":"open_access","date_created":"2023-07-24T15:11:05Z","success":1,"file_name":"icalp23.pdf","creator":"esarac","file_size":859379}],"doi":"10.4230/LIPIcs.ICALP.2023.129","day":"05","acknowledgement":"This work was supported in part by the ERC-2020-AdG 101020093.\r\nWe thank Pierre Ganty for early discussions and the anonymous reviewers for their helpful comments.\r\n","publication_identifier":{"isbn":["9783959772785"],"eissn":["1868-8969"]},"year":"2023","ec_funded":1,"publication":"50th International Colloquium on Automata, Languages, and Programming","arxiv":1,"ddc":["000"],"project":[{"call_identifier":"H2020","name":"Vigilant Algorithmic Monitoring of Software","_id":"62781420-2b32-11ec-9570-8d9b63373d4d","grant_number":"101020093"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","page":"129:1--129:20","date_updated":"2025-07-10T11:50:41Z","title":"Regular methods for operator precedence languages","author":[{"first_name":"Thomas A","orcid":"0000-0002-2985-7724","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","full_name":"Henzinger, Thomas A","last_name":"Henzinger"},{"full_name":"Kebis, Pavol","last_name":"Kebis","first_name":"Pavol"},{"id":"b26baa86-3308-11ec-87b0-8990f34baa85","full_name":"Mazzocchi, Nicolas Adrien","last_name":"Mazzocchi","first_name":"Nicolas Adrien"},{"full_name":"Sarac, Naci E","last_name":"Sarac","id":"8C6B42F8-C8E6-11E9-A03A-F2DCE5697425","first_name":"Naci E"}],"has_accepted_license":"1","article_processing_charge":"Yes","file_date_updated":"2023-07-24T15:11:05Z","status":"public","language":[{"iso":"eng"}],"quality_controlled":"1","citation":{"short":"T.A. Henzinger, P. Kebis, N.A. Mazzocchi, N.E. Sarac, in:, 50th International Colloquium on Automata, Languages, and Programming, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2023, p. 129:1--129:20.","mla":"Henzinger, Thomas A., et al. “Regular Methods for Operator Precedence Languages.” 50th International Colloquium on Automata, Languages, and Programming, vol. 261, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2023, p. 129:1--129:20, doi:10.4230/LIPIcs.ICALP.2023.129.","ista":"Henzinger TA, Kebis P, Mazzocchi NA, Sarac NE. 2023. Regular methods for operator precedence languages. 50th International Colloquium on Automata, Languages, and Programming. ICALP: Automata, Languages and Programming, LIPIcs, vol. 261, 129:1--129:20.","chicago":"Henzinger, Thomas A, Pavol Kebis, Nicolas Adrien Mazzocchi, and Naci E Sarac. “Regular Methods for Operator Precedence Languages.” In 50th International Colloquium on Automata, Languages, and Programming, 261:129:1--129:20. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2023. https://doi.org/10.4230/LIPIcs.ICALP.2023.129.","apa":"Henzinger, T. A., Kebis, P., Mazzocchi, N. A., & Sarac, N. E. (2023). Regular methods for operator precedence languages. In 50th International Colloquium on Automata, Languages, and Programming (Vol. 261, p. 129:1--129:20). Paderborn, Germany: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.4230/LIPIcs.ICALP.2023.129","ieee":"T. A. Henzinger, P. Kebis, N. A. Mazzocchi, and N. E. Sarac, “Regular methods for operator precedence languages,” in 50th International Colloquium on Automata, Languages, and Programming, Paderborn, Germany, 2023, vol. 261, p. 129:1--129:20.","ama":"Henzinger TA, Kebis P, Mazzocchi NA, Sarac NE. Regular methods for operator precedence languages. In: 50th International Colloquium on Automata, Languages, and Programming. Vol 261. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2023:129:1--129:20. doi:10.4230/LIPIcs.ICALP.2023.129"},"abstract":[{"text":"The operator precedence languages (OPLs) represent the largest known subclass of the context-free languages which enjoys all desirable closure and decidability properties. This includes the decidability of language inclusion, which is the ultimate verification problem. Operator precedence grammars, automata, and logics have been investigated and used, for example, to verify programs with arithmetic expressions and exceptions (both of which are deterministic pushdown but lie outside the scope of the visibly pushdown languages). In this paper, we complete the picture and give, for the first time, an algebraic characterization of the class of OPLs in the form of a syntactic congruence that has finitely many equivalence classes exactly for the operator precedence languages. This is a generalization of the celebrated Myhill-Nerode theorem for the regular languages to OPLs. As one of the consequences, we show that universality and language inclusion for nondeterministic operator precedence automata can be solved by an antichain algorithm. Antichain algorithms avoid determinization and complementation through an explicit subset construction, by leveraging a quasi-order on words, which allows the pruning of the search space for counterexample words without sacrificing completeness. Antichain algorithms can be implemented symbolically, and these implementations are today the best-performing algorithms in practice for the inclusion of finite automata. We give a generic construction of the quasi-order needed for antichain algorithms from a finite syntactic congruence. This yields the first antichain algorithm for OPLs, an algorithm that solves the ExpTime-hard language inclusion problem for OPLs in exponential time.","lang":"eng"}],"type":"conference","department":[{"_id":"GradSch"},{"_id":"ToHe"}],"volume":261,"corr_author":"1","publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","date_created":"2023-07-24T15:11:41Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"publication_status":"published","alternative_title":["LIPIcs"],"external_id":{"arxiv":["2305.03447"]},"conference":{"end_date":"2023-07-14","name":"ICALP: Automata, Languages and Programming","location":"Paderborn, Germany","start_date":"2023-07-10"},"_id":"13292","scopus_import":"1","month":"07"},{"publisher":"Springer Nature","corr_author":"1","volume":13965,"department":[{"_id":"GradSch"},{"_id":"ToHe"}],"citation":{"short":"T.A. Henzinger, M. Karimi, K. Kueffner, K. Mallik, in:, Computer Aided Verification, Springer Nature, 2023, pp. 358–382.","mla":"Henzinger, Thomas A., et al. “Monitoring Algorithmic Fairness.” Computer Aided Verification, vol. 13965, Springer Nature, 2023, pp. 358–382, doi:10.1007/978-3-031-37703-7_17.","ista":"Henzinger TA, Karimi M, Kueffner K, Mallik K. 2023. Monitoring algorithmic fairness. Computer Aided Verification. CAV: Computer Aided Verification, LNCS, vol. 13965, 358–382.","chicago":"Henzinger, Thomas A, Mahyar Karimi, Konstantin Kueffner, and Kaushik Mallik. “Monitoring Algorithmic Fairness.” In Computer Aided Verification, 13965:358–382. Springer Nature, 2023. https://doi.org/10.1007/978-3-031-37703-7_17.","ama":"Henzinger TA, Karimi M, Kueffner K, Mallik K. Monitoring algorithmic fairness. In: Computer Aided Verification. Vol 13965. Springer Nature; 2023:358–382. doi:10.1007/978-3-031-37703-7_17","apa":"Henzinger, T. A., Karimi, M., Kueffner, K., & Mallik, K. (2023). Monitoring algorithmic fairness. In Computer Aided Verification (Vol. 13965, pp. 358–382). Paris, France: Springer Nature. https://doi.org/10.1007/978-3-031-37703-7_17","ieee":"T. A. Henzinger, M. Karimi, K. Kueffner, and K. Mallik, “Monitoring algorithmic fairness,” in Computer Aided Verification, Paris, France, 2023, vol. 13965, pp. 358–382."},"type":"conference","abstract":[{"lang":"eng","text":"Machine-learned systems are in widespread use for making decisions about humans, and it is important that they are fair, i.e., not biased against individuals based on sensitive attributes. We present runtime verification of algorithmic fairness for systems whose models are unknown, but are assumed to have a Markov chain structure. We introduce a specification language that can model many common algorithmic fairness properties, such as demographic parity, equal opportunity, and social burden. We build monitors that observe a long sequence of events as generated by a given system, and output, after each observation, a quantitative estimate of how fair or biased the system was on that run until that point in time. The estimate is proven to be correct modulo a variable error bound and a given confidence level, where the error bound gets tighter as the observed sequence gets longer. Our monitors are of two types, and use, respectively, frequentist and Bayesian statistical inference techniques. While the frequentist monitors compute estimates that are objectively correct with respect to the ground truth, the Bayesian monitors compute estimates that are correct subject to a given prior belief about the system’s model. Using a prototype implementation, we show how we can monitor if a bank is fair in giving loans to applicants from different social backgrounds, and if a college is fair in admitting students while maintaining a reasonable financial burden on the society. Although they exhibit different theoretical complexities in certain cases, in our experiments, both frequentist and Bayesian monitors took less than a millisecond to update their verdicts after each observation."}],"quality_controlled":"1","month":"07","scopus_import":"1","_id":"13310","conference":{"start_date":"2023-07-17","location":"Paris, France","name":"CAV: Computer Aided Verification","end_date":"2023-07-22"},"external_id":{"arxiv":["2305.15979"],"isi":["001310804800017"]},"alternative_title":["LNCS"],"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"publication_status":"published","date_created":"2023-07-25T18:32:40Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","project":[{"call_identifier":"H2020","name":"Vigilant Algorithmic Monitoring of Software","_id":"62781420-2b32-11ec-9570-8d9b63373d4d","grant_number":"101020093"}],"ddc":["000"],"isi":1,"arxiv":1,"publication":"Computer Aided Verification","acknowledgement":"This work is supported by the European Research Council under Grant No.: ERC-2020-AdG101020093.","publication_identifier":{"eissn":["1611-3349"],"eisbn":["9783031377037"],"isbn":["9783031377020"],"issn":["0302-9743"]},"year":"2023","ec_funded":1,"oa":1,"file":[{"content_type":"application/pdf","checksum":"ccaf94bf7d658ba012c016e11869b54c","relation":"main_file","date_updated":"2023-07-31T08:11:20Z","file_id":"13327","access_level":"open_access","file_name":"2023_LNCS_CAV_HenzingerT.pdf","date_created":"2023-07-31T08:11:20Z","success":1,"creator":"dernst","file_size":647760}],"day":"18","doi":"10.1007/978-3-031-37703-7_17","date_published":"2023-07-18T00:00:00Z","intvolume":" 13965","status":"public","language":[{"iso":"eng"}],"article_processing_charge":"Yes (in subscription journal)","has_accepted_license":"1","file_date_updated":"2023-07-31T08:11:20Z","author":[{"first_name":"Thomas A","orcid":"0000-0002-2985-7724","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","last_name":"Henzinger","full_name":"Henzinger, Thomas A"},{"orcid":"0009-0005-0820-1696","full_name":"Karimi, Mahyar","last_name":"Karimi","id":"6e5417ba-5355-11ee-ae5a-94c2e510b26b","first_name":"Mahyar"},{"orcid":"0000-0001-8974-2542","id":"8121a2d0-dc85-11ea-9058-af578f3b4515","full_name":"Kueffner, Konstantin","last_name":"Kueffner","first_name":"Konstantin"},{"orcid":"0000-0001-9864-7475","last_name":"Mallik","full_name":"Mallik, Kaushik","id":"0834ff3c-6d72-11ec-94e0-b5b0a4fb8598","first_name":"Kaushik"}],"title":"Monitoring algorithmic fairness","date_updated":"2026-01-21T07:24:31Z","page":"358–382","oa_version":"Published Version"},{"date_created":"2023-07-30T22:01:02Z","publication_status":"published","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"external_id":{"pmid":["37463204"],"isi":["001121663500001"]},"_id":"13315","scopus_import":"1","issue":"30","month":"07","quality_controlled":"1","type":"journal_article","pmid":1,"abstract":[{"text":"How do statistical dependencies in measurement noise influence high-dimensional inference? To answer this, we study the paradigmatic spiked matrix model of principal components analysis (PCA), where a rank-one matrix is corrupted by additive noise. We go beyond the usual independence assumption on the noise entries, by drawing the noise from a low-order polynomial orthogonal matrix ensemble. The resulting noise correlations make the setting relevant for applications but analytically challenging. We provide characterization of the Bayes optimal limits of inference in this model. If the spike is rotation invariant, we show that standard spectral PCA is optimal. However, for more general priors, both PCA and the existing approximate message-passing algorithm (AMP) fall short of achieving the information-theoretic limits, which we compute using the replica method from statistical physics. We thus propose an AMP, inspired by the theory of adaptive Thouless–Anderson–Palmer equations, which is empirically observed to saturate the conjectured theoretical limit. This AMP comes with a rigorous state evolution analysis tracking its performance. Although we focus on specific noise distributions, our methodology can be generalized to a wide class of trace matrix ensembles at the cost of more involved expressions. Finally, despite the seemingly strong assumption of rotation-invariant noise, our theory empirically predicts algorithmic performance on real data, pointing at strong universality properties.","lang":"eng"}],"citation":{"mla":"Barbier, Jean, et al. “Fundamental Limits in Structured Principal Component Analysis and How to Reach Them.” Proceedings of the National Academy of Sciences of the United States of America, vol. 120, no. 30, e2302028120, National Academy of Sciences, 2023, doi:10.1073/pnas.2302028120.","ista":"Barbier J, Camilli F, Mondelli M, Sáenz M. 2023. Fundamental limits in structured principal component analysis and how to reach them. Proceedings of the National Academy of Sciences of the United States of America. 120(30), e2302028120.","chicago":"Barbier, Jean, Francesco Camilli, Marco Mondelli, and Manuel Sáenz. “Fundamental Limits in Structured Principal Component Analysis and How to Reach Them.” Proceedings of the National Academy of Sciences of the United States of America. National Academy of Sciences, 2023. https://doi.org/10.1073/pnas.2302028120.","ama":"Barbier J, Camilli F, Mondelli M, Sáenz M. Fundamental limits in structured principal component analysis and how to reach them. Proceedings of the National Academy of Sciences of the United States of America. 2023;120(30). doi:10.1073/pnas.2302028120","ieee":"J. Barbier, F. Camilli, M. Mondelli, and M. Sáenz, “Fundamental limits in structured principal component analysis and how to reach them,” Proceedings of the National Academy of Sciences of the United States of America, vol. 120, no. 30. National Academy of Sciences, 2023.","apa":"Barbier, J., Camilli, F., Mondelli, M., & Sáenz, M. (2023). Fundamental limits in structured principal component analysis and how to reach them. Proceedings of the National Academy of Sciences of the United States of America. National Academy of Sciences. https://doi.org/10.1073/pnas.2302028120","short":"J. Barbier, F. Camilli, M. Mondelli, M. Sáenz, Proceedings of the National Academy of Sciences of the United States of America 120 (2023)."},"department":[{"_id":"MaMo"}],"volume":120,"publisher":"National Academy of Sciences","oa_version":"Published Version","date_updated":"2025-09-09T12:41:50Z","related_material":{"link":[{"url":"https://github.com/fcamilli95/Structured-PCA-","relation":"software"}]},"title":"Fundamental limits in structured principal component analysis and how to reach them","author":[{"first_name":"Jean","last_name":"Barbier","full_name":"Barbier, Jean"},{"full_name":"Camilli, Francesco","last_name":"Camilli","first_name":"Francesco"},{"orcid":"0000-0002-3242-7020","id":"27EB676C-8706-11E9-9510-7717E6697425","full_name":"Mondelli, Marco","last_name":"Mondelli","first_name":"Marco"},{"first_name":"Manuel","full_name":"Sáenz, Manuel","last_name":"Sáenz"}],"file_date_updated":"2023-07-31T07:30:48Z","article_processing_charge":"Yes (in subscription journal)","has_accepted_license":"1","language":[{"iso":"eng"}],"status":"public","intvolume":" 120","date_published":"2023-07-25T00:00:00Z","day":"25","doi":"10.1073/pnas.2302028120","oa":1,"file":[{"file_size":995933,"creator":"dernst","file_name":"2023_PNAS_Barbier.pdf","success":1,"date_created":"2023-07-31T07:30:48Z","access_level":"open_access","file_id":"13323","date_updated":"2023-07-31T07:30:48Z","relation":"main_file","content_type":"application/pdf","checksum":"1fc06228afdb3aa80cf8e7766bcf9dc5"}],"article_type":"original","acknowledgement":"J.B. was funded by the European Union (ERC, CHORAL, project number 101039794). Views and opinions expressed are however those of the author(s) only and do not necessarily reflect those of the European Union or the European Research Council. Neither the European Union nor the granting authority can be held responsible for them. M.M. was supported by the 2019 Lopez-Loreta Prize. We would like to thank the reviewers for the insightful comments and, in particular, for suggesting the BAMP-inspired denoisers leading to AMP-AP.","publication_identifier":{"eissn":["1091-6490"]},"year":"2023","article_number":"e2302028120","publication":"Proceedings of the National Academy of Sciences of the United States of America","isi":1,"ddc":["000"],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","project":[{"name":"Prix Lopez-Loretta 2019 - Marco Mondelli","_id":"059876FA-7A3F-11EA-A408-12923DDC885E"}]},{"oa_version":"Published Version","has_accepted_license":"1","article_processing_charge":"Yes","file_date_updated":"2023-07-31T07:43:00Z","status":"public","language":[{"iso":"eng"}],"date_updated":"2023-12-13T11:37:36Z","title":"The yeast endocytic early/sorting compartment exists as an independent sub-compartment within the trans-Golgi network","author":[{"first_name":"Junko Y.","full_name":"Toshima, Junko Y.","last_name":"Toshima"},{"first_name":"Ayana","last_name":"Tsukahara","full_name":"Tsukahara, Ayana"},{"first_name":"Makoto","last_name":"Nagano","full_name":"Nagano, Makoto"},{"last_name":"Tojima","full_name":"Tojima, Takuro","first_name":"Takuro"},{"first_name":"Daria E","orcid":"0000-0001-8323-8353","id":"3D224B9E-F248-11E8-B48F-1D18A9856A87","full_name":"Siekhaus, Daria E","last_name":"Siekhaus"},{"first_name":"Akihiko","full_name":"Nakano, Akihiko","last_name":"Nakano"},{"last_name":"Toshima","full_name":"Toshima, Jiro","first_name":"Jiro"}],"acknowledgement":"This work was supported by JSPS KAKENHI grant #18K062291, and the Takeda Science Foundation to JYT., as well as JSPS KAKENHI grant #19K065710, the Takeda Science Foundation, and Life Science Foundation of Japan to JT.","article_type":"original","publication_identifier":{"eissn":["2050-084X"]},"year":"2023","article_number":"e84850","date_published":"2023-07-21T00:00:00Z","intvolume":" 12","file":[{"relation":"main_file","checksum":"2af111a00cf5e3a956f7f0fd13199b15","content_type":"application/pdf","file_id":"13324","date_updated":"2023-07-31T07:43:00Z","access_level":"open_access","date_created":"2023-07-31T07:43:00Z","file_name":"2023_eLife_Toshima.pdf","success":1,"file_size":11980913,"creator":"dernst"}],"oa":1,"day":"21","doi":"10.7554/eLife.84850","ddc":["570"],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","isi":1,"publication":"eLife","external_id":{"isi":["001035372800001"],"pmid":["37477116"]},"date_created":"2023-07-30T22:01:02Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"publication_status":"published","scopus_import":"1","month":"07","_id":"13316","quality_controlled":"1","citation":{"short":"J.Y. Toshima, A. Tsukahara, M. Nagano, T. Tojima, D.E. Siekhaus, A. Nakano, J. Toshima, ELife 12 (2023).","chicago":"Toshima, Junko Y., Ayana Tsukahara, Makoto Nagano, Takuro Tojima, Daria E Siekhaus, Akihiko Nakano, and Jiro Toshima. “The Yeast Endocytic Early/Sorting Compartment Exists as an Independent Sub-Compartment within the Trans-Golgi Network.” ELife. eLife Sciences Publications, 2023. https://doi.org/10.7554/eLife.84850.","ista":"Toshima JY, Tsukahara A, Nagano M, Tojima T, Siekhaus DE, Nakano A, Toshima J. 2023. The yeast endocytic early/sorting compartment exists as an independent sub-compartment within the trans-Golgi network. eLife. 12, e84850.","mla":"Toshima, Junko Y., et al. “The Yeast Endocytic Early/Sorting Compartment Exists as an Independent Sub-Compartment within the Trans-Golgi Network.” ELife, vol. 12, e84850, eLife Sciences Publications, 2023, doi:10.7554/eLife.84850.","ieee":"J. Y. Toshima et al., “The yeast endocytic early/sorting compartment exists as an independent sub-compartment within the trans-Golgi network,” eLife, vol. 12. eLife Sciences Publications, 2023.","ama":"Toshima JY, Tsukahara A, Nagano M, et al. The yeast endocytic early/sorting compartment exists as an independent sub-compartment within the trans-Golgi network. eLife. 2023;12. doi:10.7554/eLife.84850","apa":"Toshima, J. Y., Tsukahara, A., Nagano, M., Tojima, T., Siekhaus, D. E., Nakano, A., & Toshima, J. (2023). The yeast endocytic early/sorting compartment exists as an independent sub-compartment within the trans-Golgi network. ELife. eLife Sciences Publications. https://doi.org/10.7554/eLife.84850"},"type":"journal_article","pmid":1,"abstract":[{"text":"Although budding yeast has been extensively used as a model organism for studying organelle functions and intracellular vesicle trafficking, whether it possesses an independent endocytic early/sorting compartment that sorts endocytic cargos to the endo-lysosomal pathway or the recycling pathway has long been unclear. The structure and properties of the endocytic early/sorting compartment differ significantly between organisms; in plant cells, the trans-Golgi network (TGN) serves this role, whereas in mammalian cells a separate intracellular structure performs this function. The yeast syntaxin homolog Tlg2p, widely localizing to the TGN and endosomal compartments, is presumed to act as a Q-SNARE for endocytic vesicles, but which compartment is the direct target for endocytic vesicles remained unanswered. Here we demonstrate by high-speed and high-resolution 4D imaging of fluorescently labeled endocytic cargos that the Tlg2p-residing compartment within the TGN functions as the early/sorting compartment. After arriving here, endocytic cargos are recycled to the plasma membrane or transported to the yeast Rab5-residing endosomal compartment through the pathway requiring the clathrin adaptors GGAs. Interestingly, Gga2p predominantly localizes at the Tlg2p-residing compartment, and the deletion of GGAs has little effect on another TGN region where Sec7p is present but suppresses dynamics of the Tlg2-residing early/sorting compartment, indicating that the Tlg2p- and Sec7p-residing regions are discrete entities in the mutant. Thus, the Tlg2p-residing region seems to serve as an early/sorting compartment and function independently of the Sec7p-residing region within the TGN.","lang":"eng"}],"publisher":"eLife Sciences Publications","department":[{"_id":"DaSi"}],"volume":12},{"month":"10","scopus_import":"1","_id":"13319","external_id":{"pmid":["37766789"],"arxiv":["2303.15949"],"isi":["001033655400002"]},"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"publication_status":"published","date_created":"2023-07-30T22:01:03Z","publisher":"Springer Nature","corr_author":"1","volume":403,"department":[{"_id":"JaMa"}],"citation":{"ama":"Vernooij M, Wirth M. Derivations and KMS-symmetric quantum Markov semigroups. Communications in Mathematical Physics. 2023;403:381-416. doi:10.1007/s00220-023-04795-6","ieee":"M. Vernooij and M. Wirth, “Derivations and KMS-symmetric quantum Markov semigroups,” Communications in Mathematical Physics, vol. 403. Springer Nature, pp. 381–416, 2023.","apa":"Vernooij, M., & Wirth, M. (2023). Derivations and KMS-symmetric quantum Markov semigroups. Communications in Mathematical Physics. Springer Nature. https://doi.org/10.1007/s00220-023-04795-6","ista":"Vernooij M, Wirth M. 2023. Derivations and KMS-symmetric quantum Markov semigroups. Communications in Mathematical Physics. 403, 381–416.","chicago":"Vernooij, Matthijs, and Melchior Wirth. “Derivations and KMS-Symmetric Quantum Markov Semigroups.” Communications in Mathematical Physics. Springer Nature, 2023. https://doi.org/10.1007/s00220-023-04795-6.","mla":"Vernooij, Matthijs, and Melchior Wirth. “Derivations and KMS-Symmetric Quantum Markov Semigroups.” Communications in Mathematical Physics, vol. 403, Springer Nature, 2023, pp. 381–416, doi:10.1007/s00220-023-04795-6.","short":"M. Vernooij, M. Wirth, Communications in Mathematical Physics 403 (2023) 381–416."},"type":"journal_article","pmid":1,"abstract":[{"text":"We prove that the generator of the L2 implementation of a KMS-symmetric quantum Markov semigroup can be expressed as the square of a derivation with values in a Hilbert bimodule, extending earlier results by Cipriani and Sauvageot for tracially symmetric semigroups and the second-named author for GNS-symmetric semigroups. This result hinges on the introduction of a new completely positive map on the algebra of bounded operators on the GNS Hilbert space. This transformation maps symmetric Markov operators to symmetric Markov operators and is essential to obtain the required inner product on the Hilbert bimodule.","lang":"eng"}],"quality_controlled":"1","status":"public","language":[{"iso":"eng"}],"article_processing_charge":"Yes (via OA deal)","has_accepted_license":"1","file_date_updated":"2024-01-30T12:15:11Z","author":[{"first_name":"Matthijs","full_name":"Vernooij, Matthijs","last_name":"Vernooij"},{"last_name":"Wirth","full_name":"Wirth, Melchior","id":"88644358-0A0E-11EA-8FA5-49A33DDC885E","orcid":"0000-0002-0519-4241","first_name":"Melchior"}],"title":"Derivations and KMS-symmetric quantum Markov semigroups","date_updated":"2025-04-23T13:10:45Z","page":"381-416","oa_version":"Published Version","project":[{"name":"Gradient flow techniques for quantum Markov semigroups","_id":"34c6ea2d-11ca-11ed-8bc3-c04f3c502833","grant_number":"ESP156_N"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","ddc":["510"],"isi":1,"arxiv":1,"publication":"Communications in Mathematical Physics","acknowledgement":"The authors are grateful to Martijn Caspers for helpful comments on a preliminary version of this manuscript. M. V. was supported by the NWO Vidi grant VI.Vidi.192.018 ‘Non-commutative harmonic analysis and rigidity of operator algebras’. M. W. was funded by the Austrian Science Fund (FWF) under the Esprit Programme [ESP 156]. For the purpose of Open Access, the authors have applied a CC BY public copyright licence to any Author Accepted Manuscript (AAM) version arising from this submission. Open access funding provided by Austrian Science Fund (FWF).","publication_identifier":{"eissn":["1432-0916"],"issn":["0010-3616"]},"year":"2023","article_type":"original","oa":1,"file":[{"access_level":"open_access","date_created":"2024-01-30T12:15:11Z","success":1,"file_name":"2023_CommMathPhysics_Vernooij.pdf","file_size":481209,"creator":"dernst","relation":"main_file","checksum":"cca204e81891270216a0c84eb8bcd398","content_type":"application/pdf","file_id":"14905","date_updated":"2024-01-30T12:15:11Z"}],"doi":"10.1007/s00220-023-04795-6","day":"01","date_published":"2023-10-01T00:00:00Z","intvolume":" 403"},{"publisher":"Institute of Electrical and Electronics Engineers","corr_author":"1","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2212.01572","open_access":"1"}],"department":[{"_id":"MaMo"}],"citation":{"ama":"Xu Y, Hou TQ, Liang SS, Mondelli M. Approximate message passing for multi-layer estimation in rotationally invariant models. In: 2023 IEEE Information Theory Workshop. Institute of Electrical and Electronics Engineers; 2023:294-298. doi:10.1109/ITW55543.2023.10160238","apa":"Xu, Y., Hou, T. Q., Liang, S. S., & Mondelli, M. (2023). Approximate message passing for multi-layer estimation in rotationally invariant models. In 2023 IEEE Information Theory Workshop (pp. 294–298). Saint-Malo, France: Institute of Electrical and Electronics Engineers. https://doi.org/10.1109/ITW55543.2023.10160238","ieee":"Y. Xu, T. Q. Hou, S. S. Liang, and M. Mondelli, “Approximate message passing for multi-layer estimation in rotationally invariant models,” in 2023 IEEE Information Theory Workshop, Saint-Malo, France, 2023, pp. 294–298.","mla":"Xu, Yizhou, et al. “Approximate Message Passing for Multi-Layer Estimation in Rotationally Invariant Models.” 2023 IEEE Information Theory Workshop, Institute of Electrical and Electronics Engineers, 2023, pp. 294–98, doi:10.1109/ITW55543.2023.10160238.","ista":"Xu Y, Hou TQ, Liang SS, Mondelli M. 2023. Approximate message passing for multi-layer estimation in rotationally invariant models. 2023 IEEE Information Theory Workshop. ITW: Information Theory Workshop, 294–298.","chicago":"Xu, Yizhou, Tian Qi Hou, Shan Suo Liang, and Marco Mondelli. “Approximate Message Passing for Multi-Layer Estimation in Rotationally Invariant Models.” In 2023 IEEE Information Theory Workshop, 294–98. Institute of Electrical and Electronics Engineers, 2023. https://doi.org/10.1109/ITW55543.2023.10160238.","short":"Y. Xu, T.Q. Hou, S.S. Liang, M. Mondelli, in:, 2023 IEEE Information Theory Workshop, Institute of Electrical and Electronics Engineers, 2023, pp. 294–298."},"type":"conference","abstract":[{"lang":"eng","text":"We consider the problem of reconstructing the signal and the hidden variables from observations coming from a multi-layer network with rotationally invariant weight matrices. The multi-layer structure models inference from deep generative priors, and the rotational invariance imposed on the weights generalizes the i.i.d. Gaussian assumption by allowing for a complex correlation structure, which is typical in applications. In this work, we present a new class of approximate message passing (AMP) algorithms and give a state evolution recursion which precisely characterizes their performance in the large system limit. In contrast with the existing multi-layer VAMP (ML-VAMP) approach, our proposed AMP – dubbed multilayer rotationally invariant generalized AMP (ML-RI-GAMP) – provides a natural generalization beyond Gaussian designs, in the sense that it recovers the existing Gaussian AMP as a special case. Furthermore, ML-RI-GAMP exhibits a significantly lower complexity than ML-VAMP, as the computationally intensive singular value decomposition is replaced by an estimation of the moments of the design matrices. Finally, our numerical results show that this complexity gain comes at little to no cost in the performance of the algorithm."}],"quality_controlled":"1","month":"05","scopus_import":"1","_id":"13321","conference":{"end_date":"2023-04-28","name":"ITW: Information Theory Workshop","location":"Saint-Malo, France","start_date":"2023-04-23"},"external_id":{"arxiv":["2212.01572"],"isi":["001031733100053"]},"publication_status":"published","date_created":"2023-07-30T22:01:04Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","project":[{"_id":"059876FA-7A3F-11EA-A408-12923DDC885E","name":"Prix Lopez-Loretta 2019 - Marco Mondelli"}],"isi":1,"publication":"2023 IEEE Information Theory Workshop","arxiv":1,"year":"2023","acknowledgement":"Marco Mondelli was partially supported by the 2019 Lopez-Loreta prize.","publication_identifier":{"isbn":["9798350301496"],"eissn":["2475-4218"]},"oa":1,"day":"01","doi":"10.1109/ITW55543.2023.10160238","date_published":"2023-05-01T00:00:00Z","status":"public","language":[{"iso":"eng"}],"article_processing_charge":"No","title":"Approximate message passing for multi-layer estimation in rotationally invariant models","author":[{"first_name":"Yizhou","full_name":"Xu, Yizhou","last_name":"Xu"},{"first_name":"Tian Qi","last_name":"Hou","full_name":"Hou, Tian Qi"},{"full_name":"Liang, Shan Suo","last_name":"Liang","first_name":"Shan Suo"},{"first_name":"Marco","id":"27EB676C-8706-11E9-9510-7717E6697425","last_name":"Mondelli","full_name":"Mondelli, Marco","orcid":"0000-0002-3242-7020"}],"date_updated":"2025-04-15T07:50:16Z","page":"294-298","oa_version":"Preprint"},{"year":"2023","oa":1,"citation":{"apa":"Kleshnina, M. (2023). kleshnina/stochgames_info: The effect of environmental information on evolution of cooperation in stochastic games. Zenodo. https://doi.org/10.5281/ZENODO.8059564","ieee":"M. Kleshnina, “kleshnina/stochgames_info: The effect of environmental information on evolution of cooperation in stochastic games.” Zenodo, 2023.","ama":"Kleshnina M. kleshnina/stochgames_info: The effect of environmental information on evolution of cooperation in stochastic games. 2023. doi:10.5281/ZENODO.8059564","chicago":"Kleshnina, Maria. “Kleshnina/Stochgames_info: The Effect of Environmental Information on Evolution of Cooperation in Stochastic Games.” Zenodo, 2023. https://doi.org/10.5281/ZENODO.8059564.","ista":"Kleshnina M. 2023. kleshnina/stochgames_info: The effect of environmental information on evolution of cooperation in stochastic games, Zenodo, 10.5281/ZENODO.8059564.","mla":"Kleshnina, Maria. Kleshnina/Stochgames_info: The Effect of Environmental Information on Evolution of Cooperation in Stochastic Games. Zenodo, 2023, doi:10.5281/ZENODO.8059564.","short":"M. Kleshnina, (2023)."},"doi":"10.5281/ZENODO.8059564","day":"20","type":"research_data_reference","date_published":"2023-06-20T00:00:00Z","publisher":"Zenodo","corr_author":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","ddc":["000"],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.5281/zenodo.8059564"}],"department":[{"_id":"KrCh"}],"oa_version":"Published Version","date_created":"2023-07-31T11:30:46Z","status":"public","month":"06","article_processing_charge":"No","title":"kleshnina/stochgames_info: The effect of environmental information on evolution of cooperation in stochastic games","author":[{"last_name":"Kleshnina","full_name":"Kleshnina, Maria","id":"4E21749C-F248-11E8-B48F-1D18A9856A87","first_name":"Maria"}],"_id":"13336","related_material":{"record":[{"status":"public","id":"13258","relation":"used_in_publication"}]},"date_updated":"2025-04-15T06:54:58Z"},{"ec_funded":1,"year":"2023","publication_identifier":{"eissn":["1095-9203"]},"acknowledgement":"We acknowledge funding from the European Union’s Horizon 2020 Research and Innovation Program [European Research Council grants 820008 (Ra.K.) and 101045223 (A.P.) and Marie Skłodowska-Curie grants 812868 (J.G.) and 101022777 (T.-P.R.)], the Academy of Finland [Center of Excellence Programme LIBER grant 346107 (A.P.), Flagship Programme PREIN grant 320165 (A.P.), and Postdoctoral Researcher grant 340103 (T.-P.R.)], Zuckerman STEM Leadership Program Fellowship (J.R.C.), President’s PhD Scholarship (M.O.), and the EPSRC [Established Career Fellowship grant EP/R00188X/1 (M.J.F.)].","article_type":"original","doi":"10.1126/science.adh9059","day":"22","oa":1,"intvolume":" 381","date_published":"2023-09-22T00:00:00Z","project":[{"_id":"7bef070e-9f16-11ee-852c-db9675e131d9","name":"Dissipative self-assembly in synthetic systems: Towards life-like materials","grant_number":"820008","call_identifier":"H2020"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","publication":"Science","isi":1,"oa_version":"Preprint","language":[{"iso":"eng"}],"status":"public","article_processing_charge":"No","title":"Disequilibrating azoarenes by visible-light sensitization under confinement","author":[{"first_name":"Julius","full_name":"Gemen, Julius","last_name":"Gemen"},{"last_name":"Church","full_name":"Church, Jonathan R.","first_name":"Jonathan R."},{"last_name":"Ruoko","full_name":"Ruoko, Tero-Petri","first_name":"Tero-Petri"},{"first_name":"Nikita","last_name":"Durandin","full_name":"Durandin, Nikita"},{"full_name":"Białek, Michał J.","last_name":"Białek","first_name":"Michał J."},{"full_name":"Weissenfels, Maren","last_name":"Weissenfels","first_name":"Maren"},{"last_name":"Feller","full_name":"Feller, Moran","first_name":"Moran"},{"first_name":"Miri","full_name":"Kazes, Miri","last_name":"Kazes"},{"last_name":"Borin","full_name":"Borin, Veniamin A.","first_name":"Veniamin A."},{"full_name":"Odaybat, Magdalena","last_name":"Odaybat","first_name":"Magdalena"},{"first_name":"Rishir","last_name":"Kalepu","full_name":"Kalepu, Rishir"},{"first_name":"Yael","full_name":"Diskin-Posner, Yael","last_name":"Diskin-Posner"},{"first_name":"Dan","last_name":"Oron","full_name":"Oron, Dan"},{"first_name":"Matthew J.","last_name":"Fuchter","full_name":"Fuchter, Matthew J."},{"last_name":"Priimagi","full_name":"Priimagi, Arri","first_name":"Arri"},{"first_name":"Igor","full_name":"Schapiro, Igor","last_name":"Schapiro"},{"full_name":"Klajn, Rafal","last_name":"Klajn","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","first_name":"Rafal"}],"page":"1357-1363","date_updated":"2025-09-09T12:44:37Z","type":"journal_article","abstract":[{"lang":"eng","text":"Photoisomerization of azobenzenes from their stable E isomer to the metastable Z state is the basis of numerous applications of these molecules. However, this reaction typically requires ultraviolet light, which limits applicability. In this study, we introduce disequilibration by sensitization under confinement (DESC), a supramolecular approach to induce the E-to-Z isomerization by using light of a desired color, including red. DESC relies on a combination of a macrocyclic host and a photosensitizer, which act together to selectively bind and sensitize E-azobenzenes for isomerization. The Z isomer lacks strong affinity for and is expelled from the host, which can then convert additional E-azobenzenes to the Z state. In this way, the host–photosensitizer complex converts photon energy into chemical energy in the form of out-of-equilibrium photostationary states, including ones that cannot be accessed through direct photoexcitation."}],"pmid":1,"citation":{"mla":"Gemen, Julius, et al. “Disequilibrating Azoarenes by Visible-Light Sensitization under Confinement.” Science, vol. 381, no. 6664, American Association for the Advancement of Science, 2023, pp. 1357–63, doi:10.1126/science.adh9059.","ista":"Gemen J, Church JR, Ruoko T-P, Durandin N, Białek MJ, Weissenfels M, Feller M, Kazes M, Borin VA, Odaybat M, Kalepu R, Diskin-Posner Y, Oron D, Fuchter MJ, Priimagi A, Schapiro I, Klajn R. 2023. Disequilibrating azoarenes by visible-light sensitization under confinement. Science. 381(6664), 1357–1363.","chicago":"Gemen, Julius, Jonathan R. Church, Tero-Petri Ruoko, Nikita Durandin, Michał J. Białek, Maren Weissenfels, Moran Feller, et al. “Disequilibrating Azoarenes by Visible-Light Sensitization under Confinement.” Science. American Association for the Advancement of Science, 2023. https://doi.org/10.1126/science.adh9059.","ama":"Gemen J, Church JR, Ruoko T-P, et al. Disequilibrating azoarenes by visible-light sensitization under confinement. Science. 2023;381(6664):1357-1363. doi:10.1126/science.adh9059","ieee":"J. Gemen et al., “Disequilibrating azoarenes by visible-light sensitization under confinement,” Science, vol. 381, no. 6664. American Association for the Advancement of Science, pp. 1357–1363, 2023.","apa":"Gemen, J., Church, J. R., Ruoko, T.-P., Durandin, N., Białek, M. J., Weissenfels, M., … Klajn, R. (2023). Disequilibrating azoarenes by visible-light sensitization under confinement. Science. American Association for the Advancement of Science. https://doi.org/10.1126/science.adh9059","short":"J. Gemen, J.R. Church, T.-P. Ruoko, N. Durandin, M.J. Białek, M. Weissenfels, M. Feller, M. Kazes, V.A. Borin, M. Odaybat, R. Kalepu, Y. Diskin-Posner, D. Oron, M.J. Fuchter, A. Priimagi, I. Schapiro, R. Klajn, Science 381 (2023) 1357–1363."},"quality_controlled":"1","corr_author":"1","publisher":"American Association for the Advancement of Science","main_file_link":[{"open_access":"1","url":"https://doi.org/10.26434/chemrxiv-2023-gq2h0"}],"volume":381,"department":[{"_id":"RaKl"}],"external_id":{"isi":["001100654900035"],"pmid":["37733864"]},"publication_status":"published","date_created":"2023-08-01T08:26:15Z","month":"09","scopus_import":"1","issue":"6664","_id":"13340"},{"department":[{"_id":"NanoFab"},{"_id":"Bio"}],"publisher":"Embo Press","quality_controlled":"1","type":"journal_article","pmid":1,"abstract":[{"text":"Motile cells moving in multicellular organisms encounter microenvironments of locally heterogeneous mechanochemical composition. Individual compositional parameters like chemotactic signals, adhesiveness, and pore sizes are well known to be sensed by motile cells, providing individual guidance cues for cellular pathfinding. However, motile cells encounter diverse mechanochemical signals at the same time, raising the question of how cells respond to locally diverse and potentially competing signals on their migration routes. Here, we reveal that motile amoeboid cells require nuclear repositioning, termed nucleokinesis, for adaptive pathfinding in heterogeneous mechanochemical microenvironments. Using mammalian immune cells and the amoebaDictyostelium discoideum, we discover that frequent, rapid and long-distance nucleokinesis is a basic component of amoeboid pathfinding, enabling cells to reorientate quickly between locally competing cues. Amoeboid nucleokinesis comprises a two-step cell polarity switch and is driven by myosin II-forces, sliding the nucleus from a ‘losing’ to the ‘winning’ leading edge to re-adjust the nuclear to the cellular path. Impaired nucleokinesis distorts fast path adaptions and causes cellular arrest in the microenvironment. Our findings establish that nucleokinesis is required for amoeboid cell navigation. Given that motile single-cell amoebae, many immune cells, and some cancer cells utilize an amoeboid migration strategy, these results suggest that amoeboid nucleokinesis underlies cellular navigation during unicellular biology, immunity, and disease.","lang":"eng"}],"citation":{"apa":"Kroll, J., Hauschild, R., Kuznetcov, A., Stefanowski, K., Hermann, M. D., Merrin, J., … Renkawitz, J. (2023). Adaptive pathfinding by nucleokinesis during amoeboid migration. EMBO Journal. Embo Press. https://doi.org/10.15252/embj.2023114557","ama":"Kroll J, Hauschild R, Kuznetcov A, et al. Adaptive pathfinding by nucleokinesis during amoeboid migration. EMBO Journal. 2023. doi:10.15252/embj.2023114557","ieee":"J. Kroll et al., “Adaptive pathfinding by nucleokinesis during amoeboid migration,” EMBO Journal. Embo Press, 2023.","chicago":"Kroll, Janina, Robert Hauschild, Arthur Kuznetcov, Kasia Stefanowski, Monika D. Hermann, Jack Merrin, Lubuna B Shafeek, Annette Müller-Taubenberger, and Jörg Renkawitz. “Adaptive Pathfinding by Nucleokinesis during Amoeboid Migration.” EMBO Journal. Embo Press, 2023. https://doi.org/10.15252/embj.2023114557.","ista":"Kroll J, Hauschild R, Kuznetcov A, Stefanowski K, Hermann MD, Merrin J, Shafeek LB, Müller-Taubenberger A, Renkawitz J. 2023. Adaptive pathfinding by nucleokinesis during amoeboid migration. EMBO Journal., e114557.","mla":"Kroll, Janina, et al. “Adaptive Pathfinding by Nucleokinesis during Amoeboid Migration.” EMBO Journal, e114557, Embo Press, 2023, doi:10.15252/embj.2023114557.","short":"J. Kroll, R. Hauschild, A. Kuznetcov, K. Stefanowski, M.D. Hermann, J. Merrin, L.B. Shafeek, A. Müller-Taubenberger, J. Renkawitz, EMBO Journal (2023)."},"_id":"13342","scopus_import":"1","month":"11","date_created":"2023-08-01T08:59:06Z","publication_status":"published","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)","image":"/images/cc_by_nc_nd.png"},"external_id":{"isi":["001120971800001"],"pmid":["37987147"]},"publication":"EMBO Journal","isi":1,"ddc":["570"],"license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","date_published":"2023-11-21T00:00:00Z","day":"21","doi":"10.15252/embj.2023114557","oa":1,"file":[{"access_level":"open_access","creator":"dernst","file_size":4862497,"success":1,"file_name":"2023_EmboJournal_Kroll.pdf","date_created":"2023-11-27T08:45:56Z","checksum":"6261d0041c7e8d284c39712c40079730","content_type":"application/pdf","relation":"main_file","date_updated":"2023-11-27T08:45:56Z","file_id":"14611"}],"article_type":"original","publication_identifier":{"eissn":["1460-2075"],"issn":["0261-4189"]},"acknowledgement":"We thank Christoph Mayr and Bingzhi Wang for initial experiments on amoeboid nucleokinesis, Ana-Maria Lennon-Duménil and Aline Yatim for bone marrow from MyoIIA-Flox*CD11c-Cre mice, Michael Sixt and Aglaja Kopf for EMTB-mCherry, EB3-mCherry, Lifeact-GFP, Lfc knockout, and Myh9-GFP expressing HoxB8 cells, Malte Benjamin Braun, Mauricio Ruiz, and Madeleine T. Schmitt for critical reading of the manuscript, and the Core Facility Bioimaging, the Core Facility Flow Cytometry, and the Animal Core Facility of the Biomedical Center (BMC) for excellent support. This study was supported by the Peter Hans Hofschneider Professorship of the foundation “Stiftung Experimentelle Biomedizin” (to JR), the LMU Institutional Strategy LMU-Excellent within the framework of the German Excellence Initiative (to JR), and the Deutsche Forschungsgemeinschaft (DFG; German Research Foundation; SFB914 project A12, to JR), and the CZI grant DAF2020-225401 (https://doi.org/10.37921/120055ratwvi) from the Chan Zuckerberg Initiative DAF (to RH; an advised fund of Silicon Valley Community Foundation (funder https://doi.org/10.13039/100014989)). Open Access funding enabled and organized by Projekt DEAL.","year":"2023","article_number":"e114557","date_updated":"2025-09-09T12:44:04Z","author":[{"first_name":"Janina","last_name":"Kroll","full_name":"Kroll, Janina"},{"first_name":"Robert","full_name":"Hauschild, Robert","last_name":"Hauschild","id":"4E01D6B4-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-9843-3522"},{"full_name":"Kuznetcov, Arthur","last_name":"Kuznetcov","first_name":"Arthur"},{"first_name":"Kasia","last_name":"Stefanowski","full_name":"Stefanowski, Kasia"},{"last_name":"Hermann","full_name":"Hermann, Monika D.","first_name":"Monika D."},{"first_name":"Jack","full_name":"Merrin, Jack","last_name":"Merrin","id":"4515C308-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5145-4609"},{"first_name":"Lubuna B","last_name":"Shafeek","full_name":"Shafeek, Lubuna B","id":"3CD37A82-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-7180-6050"},{"first_name":"Annette","last_name":"Müller-Taubenberger","full_name":"Müller-Taubenberger, Annette"},{"first_name":"Jörg","id":"3F0587C8-F248-11E8-B48F-1D18A9856A87","last_name":"Renkawitz","full_name":"Renkawitz, Jörg","orcid":"0000-0003-2856-3369"}],"title":"Adaptive pathfinding by nucleokinesis during amoeboid migration","file_date_updated":"2023-11-27T08:45:56Z","article_processing_charge":"Yes (via OA deal)","has_accepted_license":"1","status":"public","language":[{"iso":"eng"}],"oa_version":"Published Version"},{"month":"01","scopus_import":"1","issue":"1","_id":"13346","publication_status":"published","date_created":"2023-08-01T09:30:29Z","publisher":"American Chemical Society","main_file_link":[{"url":"https://doi.org/10.1021/acsnano.2c07558","open_access":"1"}],"volume":17,"abstract":[{"text":"The self-assembly of nanoparticles driven by small molecules or ions may produce colloidal superlattices with features and properties reminiscent of those of metals or semiconductors. However, to what extent the properties of such supramolecular crystals actually resemble those of atomic materials often remains unclear. Here, we present coarse-grained molecular simulations explicitly demonstrating how a behavior evocative of that of semiconductors may emerge in a colloidal superlattice. As a case study, we focus on gold nanoparticles bearing positively charged groups that self-assemble into FCC crystals via mediation by citrate counterions. In silico ohmic experiments show how the dynamically diverse behavior of the ions in different superlattice domains allows the opening of conductive ionic gates above certain levels of applied electric fields. The observed binary conductive/nonconductive behavior is reminiscent of that of conventional semiconductors, while, at a supramolecular level, crossing the “band gap” requires a sufficient electrostatic stimulus to break the intermolecular interactions and make ions diffuse throughout the superlattice’s cavities.","lang":"eng"}],"type":"journal_article","extern":"1","citation":{"apa":"Lionello, C., Perego, C., Gardin, A., Klajn, R., & Pavan, G. M. (2023). Supramolecular semiconductivity through emerging ionic gates in ion–nanoparticle superlattices. ACS Nano. American Chemical Society. https://doi.org/10.1021/acsnano.2c07558","ieee":"C. Lionello, C. Perego, A. Gardin, R. Klajn, and G. M. Pavan, “Supramolecular semiconductivity through emerging ionic gates in ion–nanoparticle superlattices,” ACS Nano, vol. 17, no. 1. American Chemical Society, pp. 275–287, 2023.","ama":"Lionello C, Perego C, Gardin A, Klajn R, Pavan GM. Supramolecular semiconductivity through emerging ionic gates in ion–nanoparticle superlattices. ACS Nano. 2023;17(1):275-287. doi:10.1021/acsnano.2c07558","ista":"Lionello C, Perego C, Gardin A, Klajn R, Pavan GM. 2023. Supramolecular semiconductivity through emerging ionic gates in ion–nanoparticle superlattices. ACS Nano. 17(1), 275–287.","chicago":"Lionello, Chiara, Claudio Perego, Andrea Gardin, Rafal Klajn, and Giovanni M. Pavan. “Supramolecular Semiconductivity through Emerging Ionic Gates in Ion–Nanoparticle Superlattices.” ACS Nano. American Chemical Society, 2023. https://doi.org/10.1021/acsnano.2c07558.","mla":"Lionello, Chiara, et al. “Supramolecular Semiconductivity through Emerging Ionic Gates in Ion–Nanoparticle Superlattices.” ACS Nano, vol. 17, no. 1, American Chemical Society, 2023, pp. 275–87, doi:10.1021/acsnano.2c07558.","short":"C. Lionello, C. Perego, A. Gardin, R. Klajn, G.M. Pavan, ACS Nano 17 (2023) 275–287."},"quality_controlled":"1","status":"public","language":[{"iso":"eng"}],"article_processing_charge":"No","author":[{"full_name":"Lionello, Chiara","last_name":"Lionello","first_name":"Chiara"},{"full_name":"Perego, Claudio","last_name":"Perego","first_name":"Claudio"},{"first_name":"Andrea","last_name":"Gardin","full_name":"Gardin, Andrea"},{"first_name":"Rafal","last_name":"Klajn","full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b"},{"full_name":"Pavan, Giovanni M.","last_name":"Pavan","first_name":"Giovanni M."}],"title":"Supramolecular semiconductivity through emerging ionic gates in ion–nanoparticle superlattices","date_updated":"2023-08-02T06:51:15Z","page":"275-287","keyword":["General Physics and Astronomy","General Engineering","General Materials Science"],"oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication":"ACS Nano","article_type":"original","year":"2023","publication_identifier":{"eissn":["1936-086X"],"issn":["1936-0851"]},"day":"10","doi":"10.1021/acsnano.2c07558","oa":1,"intvolume":" 17","date_published":"2023-01-10T00:00:00Z"},{"article_type":"original","publication_identifier":{"issn":["0002-7863"],"eissn":["1520-5126"]},"year":"2023","date_published":"2023-02-09T00:00:00Z","intvolume":" 145","oa":1,"doi":"10.1021/jacs.2c11973","day":"09","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication":"Journal of the American Chemical Society","keyword":["Colloid and Surface Chemistry","Biochemistry","General Chemistry","Catalysis"],"oa_version":"Published Version","article_processing_charge":"No","language":[{"iso":"eng"}],"status":"public","page":"4098-4108","date_updated":"2024-10-14T12:11:46Z","author":[{"first_name":"Jinhua","last_name":"Wang","full_name":"Wang, Jinhua"},{"last_name":"Peled","full_name":"Peled, Tzuf Shay","first_name":"Tzuf Shay"},{"id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","last_name":"Klajn","full_name":"Klajn, Rafal","first_name":"Rafal"}],"title":"Photocleavable anionic glues for light-responsive nanoparticle aggregates","quality_controlled":"1","citation":{"mla":"Wang, Jinhua, et al. “Photocleavable Anionic Glues for Light-Responsive Nanoparticle Aggregates.” Journal of the American Chemical Society, vol. 145, no. 7, American Chemical Society, 2023, pp. 4098–108, doi:10.1021/jacs.2c11973.","ista":"Wang J, Peled TS, Klajn R. 2023. Photocleavable anionic glues for light-responsive nanoparticle aggregates. Journal of the American Chemical Society. 145(7), 4098–4108.","chicago":"Wang, Jinhua, Tzuf Shay Peled, and Rafal Klajn. “Photocleavable Anionic Glues for Light-Responsive Nanoparticle Aggregates.” Journal of the American Chemical Society. American Chemical Society, 2023. https://doi.org/10.1021/jacs.2c11973.","ieee":"J. Wang, T. S. Peled, and R. Klajn, “Photocleavable anionic glues for light-responsive nanoparticle aggregates,” Journal of the American Chemical Society, vol. 145, no. 7. American Chemical Society, pp. 4098–4108, 2023.","apa":"Wang, J., Peled, T. S., & Klajn, R. (2023). Photocleavable anionic glues for light-responsive nanoparticle aggregates. Journal of the American Chemical Society. American Chemical Society. https://doi.org/10.1021/jacs.2c11973","ama":"Wang J, Peled TS, Klajn R. Photocleavable anionic glues for light-responsive nanoparticle aggregates. Journal of the American Chemical Society. 2023;145(7):4098-4108. doi:10.1021/jacs.2c11973","short":"J. Wang, T.S. Peled, R. Klajn, Journal of the American Chemical Society 145 (2023) 4098–4108."},"extern":"1","type":"journal_article","pmid":1,"abstract":[{"lang":"eng","text":"Integrating light-sensitive molecules within nanoparticle (NP) assemblies is an attractive approach to fabricate new photoresponsive nanomaterials. Here, we describe the concept of photocleavable anionic glue (PAG): small trianions capable of mediating interactions between (and inducing the aggregation of) cationic NPs by means of electrostatic interactions. Exposure to light converts PAGs into dianionic products incapable of maintaining the NPs in an assembled state, resulting in light-triggered disassembly of NP aggregates. To demonstrate the proof-of-concept, we work with an organic PAG incorporating the UV-cleavable o-nitrobenzyl moiety and an inorganic PAG, the photosensitive trioxalatocobaltate(III) complex, which absorbs light across the entire visible spectrum. Both PAGs were used to prepare either amorphous NP assemblies or regular superlattices with a long-range NP order. These NP aggregates disassembled rapidly upon light exposure for a specific time, which could be tuned by the incident light wavelength or the amount of PAG used. Selective excitation of the inorganic PAG in a system combining the two PAGs results in a photodecomposition product that deactivates the organic PAG, enabling nontrivial disassembly profiles under a single type of external stimulus."}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1021/jacs.2c11973"}],"publisher":"American Chemical Society","volume":145,"external_id":{"pmid":["36757850"]},"date_created":"2023-08-01T09:33:08Z","publication_status":"published","scopus_import":"1","issue":"7","month":"02","_id":"13354"},{"quality_controlled":"1","citation":{"ista":"Sunko V, Sun Y, Vranas M, Homes CC, Lee C, Donoway E, Wang Z-C, Balguri S, Mahendru MB, Ruiz A, Gunn B, Basak R, Blanco-Canosa S, Schierle E, Weschke E, Tafti F, Frano A, Orenstein J. 2023. Spin-carrier coupling induced ferromagnetism and giant resistivity peak in EuCd2P2. Physical Review B. 107(14), 144404.","chicago":"Sunko, Veronika, Y. Sun, M. Vranas, C. C. Homes, C. Lee, E. Donoway, Z.-C. Wang, et al. “Spin-Carrier Coupling Induced Ferromagnetism and Giant Resistivity Peak in EuCd2P2.” Physical Review B. American Physical Society, 2023. https://doi.org/10.1103/physrevb.107.144404.","mla":"Sunko, Veronika, et al. “Spin-Carrier Coupling Induced Ferromagnetism and Giant Resistivity Peak in EuCd2P2.” Physical Review B, vol. 107, no. 14, 144404, American Physical Society, 2023, doi:10.1103/physrevb.107.144404.","apa":"Sunko, V., Sun, Y., Vranas, M., Homes, C. C., Lee, C., Donoway, E., … Orenstein, J. (2023). Spin-carrier coupling induced ferromagnetism and giant resistivity peak in EuCd2P2. Physical Review B. American Physical Society. https://doi.org/10.1103/physrevb.107.144404","ama":"Sunko V, Sun Y, Vranas M, et al. Spin-carrier coupling induced ferromagnetism and giant resistivity peak in EuCd2P2. Physical Review B. 2023;107(14). doi:10.1103/physrevb.107.144404","ieee":"V. Sunko et al., “Spin-carrier coupling induced ferromagnetism and giant resistivity peak in EuCd2P2,” Physical Review B, vol. 107, no. 14. American Physical Society, 2023.","short":"V. Sunko, Y. Sun, M. Vranas, C.C. Homes, C. Lee, E. Donoway, Z.-C. Wang, S. Balguri, M.B. Mahendru, A. Ruiz, B. Gunn, R. Basak, S. Blanco-Canosa, E. Schierle, E. Weschke, F. Tafti, A. Frano, J. Orenstein, Physical Review B 107 (2023)."},"extern":"1","type":"journal_article","abstract":[{"text":"Eu⁢Cd2⁢P2 is notable for its unconventional transport: upon cooling the metallic resistivity changes slope and begins to increase, ultimately 100-fold, before returning to its metallic value. Surprisingly, this giant peak occurs at 18 K, well above the Néel temperature (𝑇𝑁) of 11.5 K. Using a suite of sensitive probes of magnetism, including resonant x-ray scattering and magneto-optical polarimetry, we have discovered that ferromagnetic order onsets above 𝑇𝑁 in the temperature range of the resistivity peak. The observation of inverted hysteresis in this regime shows that ferromagnetism is promoted by coupling of localized spins and itinerant carriers. The resulting carrier localization is confirmed by optical conductivity measurements.","lang":"eng"}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2208.05499"}],"publisher":"American Physical Society","OA_type":"green","volume":107,"external_id":{"arxiv":["2208.05499"]},"date_created":"2025-06-10T09:08:40Z","publication_status":"published","issue":"14","scopus_import":"1","month":"04","_id":"19803","year":"2023","publication_identifier":{"issn":["2469-9950"],"eissn":["2469-9969"]},"article_type":"original","article_number":"144404","date_published":"2023-04-04T00:00:00Z","intvolume":" 107","oa":1,"doi":"10.1103/physrevb.107.144404","day":"04","OA_place":"repository","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","arxiv":1,"publication":"Physical Review B","oa_version":"Preprint","article_processing_charge":"No","status":"public","language":[{"iso":"eng"}],"date_updated":"2025-06-10T11:02:42Z","title":"Spin-carrier coupling induced ferromagnetism and giant resistivity peak in EuCd2P2","author":[{"orcid":"0000-0003-2724-3523","id":"23cb1cf6-2c7a-11ef-91a4-f72fc19f20b3","last_name":"Sunko","full_name":"Sunko, Veronika","first_name":"Veronika"},{"first_name":"Y.","full_name":"Sun, Y.","last_name":"Sun"},{"last_name":"Vranas","full_name":"Vranas, M.","first_name":"M."},{"full_name":"Homes, C. C.","last_name":"Homes","first_name":"C. C."},{"first_name":"C.","last_name":"Lee","full_name":"Lee, C."},{"first_name":"E.","full_name":"Donoway, E.","last_name":"Donoway"},{"full_name":"Wang, Z.-C.","last_name":"Wang","first_name":"Z.-C."},{"first_name":"S.","full_name":"Balguri, S.","last_name":"Balguri"},{"full_name":"Mahendru, M. B.","last_name":"Mahendru","first_name":"M. B."},{"first_name":"A.","last_name":"Ruiz","full_name":"Ruiz, A."},{"first_name":"B.","full_name":"Gunn, B.","last_name":"Gunn"},{"last_name":"Basak","full_name":"Basak, R.","first_name":"R."},{"first_name":"S.","full_name":"Blanco-Canosa, S.","last_name":"Blanco-Canosa"},{"first_name":"E.","last_name":"Schierle","full_name":"Schierle, E."},{"last_name":"Weschke","full_name":"Weschke, E.","first_name":"E."},{"first_name":"F.","full_name":"Tafti, F.","last_name":"Tafti"},{"first_name":"A.","last_name":"Frano","full_name":"Frano, A."},{"first_name":"J.","full_name":"Orenstein, J.","last_name":"Orenstein"}]},{"oa_version":"Published Version","date_updated":"2025-06-10T13:13:53Z","author":[{"first_name":"Linda","full_name":"Ye, Linda","last_name":"Ye"},{"full_name":"Sun, Yue","last_name":"Sun","first_name":"Yue"},{"orcid":"0000-0003-2724-3523","id":"23cb1cf6-2c7a-11ef-91a4-f72fc19f20b3","full_name":"Sunko, Veronika","last_name":"Sunko","first_name":"Veronika"},{"full_name":"Rodriguez-Nieva, Joaquin F.","last_name":"Rodriguez-Nieva","first_name":"Joaquin F."},{"first_name":"Matthias S.","last_name":"Ikeda","full_name":"Ikeda, Matthias S."},{"full_name":"Worasaran, Thanapat","last_name":"Worasaran","first_name":"Thanapat"},{"last_name":"Sorensen","full_name":"Sorensen, Matthew E.","first_name":"Matthew E."},{"last_name":"Bachmann","full_name":"Bachmann, Maja D.","first_name":"Maja D."},{"first_name":"Joseph","full_name":"Orenstein, Joseph","last_name":"Orenstein"},{"full_name":"Fisher, Ian R.","last_name":"Fisher","first_name":"Ian R."}],"title":"Elastocaloric signatures of symmetric and antisymmetric strain-tuning of quadrupolar and magnetic phases in DyB2C2","has_accepted_license":"1","article_processing_charge":"No","language":[{"iso":"eng"}],"status":"public","date_published":"2023-08-29T00:00:00Z","intvolume":" 120","oa":1,"doi":"10.1073/pnas.2302800120","day":"29","article_type":"original","year":"2023","publication_identifier":{"eissn":["1091-6490"],"issn":["0027-8424"]},"article_number":"e2302800120","publication":"Proceedings of the National Academy of Sciences","OA_place":"publisher","ddc":["530"],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2025-06-10T09:20:12Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)","image":"/images/cc_by_nc_nd.png"},"publication_status":"published","external_id":{"pmid":["37607225"]},"_id":"19821","issue":"35","scopus_import":"1","month":"08","quality_controlled":"1","citation":{"ista":"Ye L, Sun Y, Sunko V, Rodriguez-Nieva JF, Ikeda MS, Worasaran T, Sorensen ME, Bachmann MD, Orenstein J, Fisher IR. 2023. Elastocaloric signatures of symmetric and antisymmetric strain-tuning of quadrupolar and magnetic phases in DyB2C2. Proceedings of the National Academy of Sciences. 120(35), e2302800120.","chicago":"Ye, Linda, Yue Sun, Veronika Sunko, Joaquin F. Rodriguez-Nieva, Matthias S. Ikeda, Thanapat Worasaran, Matthew E. Sorensen, Maja D. Bachmann, Joseph Orenstein, and Ian R. Fisher. “Elastocaloric Signatures of Symmetric and Antisymmetric Strain-Tuning of Quadrupolar and Magnetic Phases in DyB2C2.” Proceedings of the National Academy of Sciences. National Academy of Sciences, 2023. https://doi.org/10.1073/pnas.2302800120.","mla":"Ye, Linda, et al. “Elastocaloric Signatures of Symmetric and Antisymmetric Strain-Tuning of Quadrupolar and Magnetic Phases in DyB2C2.” Proceedings of the National Academy of Sciences, vol. 120, no. 35, e2302800120, National Academy of Sciences, 2023, doi:10.1073/pnas.2302800120.","ama":"Ye L, Sun Y, Sunko V, et al. Elastocaloric signatures of symmetric and antisymmetric strain-tuning of quadrupolar and magnetic phases in DyB2C2. Proceedings of the National Academy of Sciences. 2023;120(35). doi:10.1073/pnas.2302800120","ieee":"L. Ye et al., “Elastocaloric signatures of symmetric and antisymmetric strain-tuning of quadrupolar and magnetic phases in DyB2C2,” Proceedings of the National Academy of Sciences, vol. 120, no. 35. National Academy of Sciences, 2023.","apa":"Ye, L., Sun, Y., Sunko, V., Rodriguez-Nieva, J. F., Ikeda, M. S., Worasaran, T., … Fisher, I. R. (2023). Elastocaloric signatures of symmetric and antisymmetric strain-tuning of quadrupolar and magnetic phases in DyB2C2. Proceedings of the National Academy of Sciences. National Academy of Sciences. https://doi.org/10.1073/pnas.2302800120","short":"L. Ye, Y. Sun, V. Sunko, J.F. Rodriguez-Nieva, M.S. Ikeda, T. Worasaran, M.E. Sorensen, M.D. Bachmann, J. Orenstein, I.R. Fisher, Proceedings of the National Academy of Sciences 120 (2023)."},"abstract":[{"lang":"eng","text":"The adiabatic elastocaloric effect measures the temperature change of a given system with strain and provides a thermodynamic probe of the entropic landscape in the temperature-strain space. Here, we demonstrate that the DC bias strain-dependence of AC elastocaloric effect allows decomposition of the latter into symmetric (rotation-symmetry-preserving) and antisymmetric (rotation-symmetry-breaking) strain channels, using a tetragonal \r\n-electron intermetallic DyB2C2—whose antiferroquadrupolar order breaks local fourfold rotational symmetries while globally remaining tetragonal—as a showcase example. We capture the strain evolution of its quadrupolar and magnetic phase transitions using both singularities in the elastocaloric coefficient and its jumps at the transitions, and the latter we show follows a modified Ehrenfest relation. We find that antisymmetric strain couples to the underlying order parameter in a biquadratic (linear-quadratic) manner in the antiferroquadrupolar (canted antiferromagnetic) phase, which are attributed to a preserved (broken) global tetragonal symmetry, respectively. The broken tetragonal symmetry in the magnetic phase is further evidenced by elastocaloric strain-hysteresis and optical birefringence. Additionally, within the staggered quadrupolar order, the observed elastocaloric response reflects a quadratic increase of entropy with antisymmetric strain, analogous to the role magnetic field plays for Ising antiferromagnetic orders by promoting pseudospin flips. Our results demonstrate AC elastocaloric effect as a compact and incisive thermodynamic probe into the coupling between electronic degrees of freedom and strain in free energy, which holds the potential for investigating and understanding the symmetry of a wide variety of ordered phases in broader classes of quantum materials."}],"type":"journal_article","pmid":1,"extern":"1","OA_type":"hybrid","volume":120,"main_file_link":[{"url":"https://doi.org/10.1073/pnas.2302800120","open_access":"1"}],"publisher":"National Academy of Sciences"},{"date_updated":"2025-06-11T06:14:06Z","related_material":{"link":[{"url":"https://doi.org/10.1063/5.0195810","relation":"erratum"}]},"author":[{"full_name":"Sun, F.","last_name":"Sun","first_name":"F."},{"full_name":"Mishra, S.","last_name":"Mishra","first_name":"S."},{"first_name":"P. H.","last_name":"McGuinness","full_name":"McGuinness, P. H."},{"first_name":"Z. H.","last_name":"Filipiak","full_name":"Filipiak, Z. H."},{"last_name":"Marković","full_name":"Marković, I.","first_name":"I."},{"first_name":"D. A.","last_name":"Sokolov","full_name":"Sokolov, D. A."},{"last_name":"Kikugawa","full_name":"Kikugawa, N.","first_name":"N."},{"first_name":"J. W.","full_name":"Orenstein, J. W.","last_name":"Orenstein"},{"first_name":"S. A.","full_name":"Hartnoll, S. A.","last_name":"Hartnoll"},{"full_name":"Mackenzie, A. P.","last_name":"Mackenzie","first_name":"A. P."},{"orcid":"0000-0003-2724-3523","full_name":"Sunko, Veronika","last_name":"Sunko","id":"23cb1cf6-2c7a-11ef-91a4-f72fc19f20b3","first_name":"Veronika"}],"title":"A spatially resolved optical method to measure thermal diffusivity","has_accepted_license":"1","article_processing_charge":"Yes (in subscription journal)","language":[{"iso":"eng"}],"status":"public","oa_version":"Published Version","publication":"Review of Scientific Instruments","arxiv":1,"ddc":["530"],"OA_place":"publisher","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","intvolume":" 94","date_published":"2023-04-10T00:00:00Z","doi":"10.1063/5.0098800","day":"10","oa":1,"year":"2023","publication_identifier":{"issn":["0034-6748"],"eissn":["1089-7623"]},"article_type":"original","article_number":"043003","_id":"19828","scopus_import":"1","issue":"4","month":"04","date_created":"2025-06-10T09:23:29Z","publication_status":"published","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"external_id":{"arxiv":["2303.02017"],"pmid":["38081228"]},"OA_type":"hybrid","volume":94,"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1063/5.0098800"}],"publisher":"AIP Publishing","quality_controlled":"1","abstract":[{"text":"We describe an optical method to directly measure the position-dependent thermal diffusivity of reflective single crystal samples across a broad range of temperatures for condensed matter physics research. Two laser beams are used, one as a source to locally modulate the sample temperature, and the other as a probe of sample reflectivity, which is a function of the modulated temperature. Thermal diffusivity is obtained from the phase delay between source and probe signals. We combine this technique with a microscope setup in an optical cryostat, in which the sample is placed on a three-axis piezo-stage, allowing for spatially resolved measurements. Furthermore, we demonstrate experimentally and mathematically that isotropic in-plane diffusivity can be obtained when overlapping the two laser beams instead of separating them in the traditional way, which further enhances the spatial resolution to a micron scale, especially valuable when studying inhomogeneous or multidomain samples. We discuss in detail the experimental conditions under which this technique is valuable and demonstrate its performance on two stoichiometric bilayer ruthenates: Sr3Ru2O7 and Ca3Ru2O7. The spatial resolution allowed us to study the diffusivity in single domains of the latter, and we uncovered a temperature-dependent in-plane diffusivity anisotropy. Finally, we used the enhanced spatial resolution enabled by overlapping the two beams to measure the temperature-dependent diffusivity of Ti-doped Ca3Ru2O7, which exhibits a metal–insulator transition. We observed large variations of transition temperature over the same sample, originating from doping inhomogeneity and pointing to the power of spatially resolved techniques in accessing inherent properties.","lang":"eng"}],"pmid":1,"type":"journal_article","extern":"1","citation":{"short":"F. Sun, S. Mishra, P.H. McGuinness, Z.H. Filipiak, I. Marković, D.A. Sokolov, N. Kikugawa, J.W. Orenstein, S.A. Hartnoll, A.P. Mackenzie, V. Sunko, Review of Scientific Instruments 94 (2023).","chicago":"Sun, F., S. Mishra, P. H. McGuinness, Z. H. Filipiak, I. Marković, D. A. Sokolov, N. Kikugawa, et al. “A Spatially Resolved Optical Method to Measure Thermal Diffusivity.” Review of Scientific Instruments. AIP Publishing, 2023. https://doi.org/10.1063/5.0098800.","ista":"Sun F, Mishra S, McGuinness PH, Filipiak ZH, Marković I, Sokolov DA, Kikugawa N, Orenstein JW, Hartnoll SA, Mackenzie AP, Sunko V. 2023. A spatially resolved optical method to measure thermal diffusivity. Review of Scientific Instruments. 94(4), 043003.","mla":"Sun, F., et al. “A Spatially Resolved Optical Method to Measure Thermal Diffusivity.” Review of Scientific Instruments, vol. 94, no. 4, 043003, AIP Publishing, 2023, doi:10.1063/5.0098800.","ieee":"F. Sun et al., “A spatially resolved optical method to measure thermal diffusivity,” Review of Scientific Instruments, vol. 94, no. 4. AIP Publishing, 2023.","apa":"Sun, F., Mishra, S., McGuinness, P. H., Filipiak, Z. H., Marković, I., Sokolov, D. A., … Sunko, V. (2023). A spatially resolved optical method to measure thermal diffusivity. Review of Scientific Instruments. AIP Publishing. https://doi.org/10.1063/5.0098800","ama":"Sun F, Mishra S, McGuinness PH, et al. A spatially resolved optical method to measure thermal diffusivity. Review of Scientific Instruments. 2023;94(4). doi:10.1063/5.0098800"}},{"conference":{"end_date":"2023-01-25","start_date":"2023-01-23","location":"Florence, Italy","name":"SOSA: Symposium on Simplicity in Algorithms"},"external_id":{"arxiv":["2108.02655"]},"publication_status":"published","date_created":"2025-07-10T13:11:47Z","month":"01","_id":"19983","citation":{"apa":"Balliu, A., Korhonen, J., Kuhn, F., Lievonen, H., Olivetti, D., Pai, S., … Uitto, J. (2023). Sinkless Orientation Made Simple. In Symposium on Simplicity in Algorithms (pp. 175–191). Florence, Italy: 2023 Society for Industrial and Applied Mathematics. https://doi.org/10.1137/1.9781611977585.ch17","ieee":"A. Balliu et al., “Sinkless Orientation Made Simple,” in Symposium on Simplicity in Algorithms, 2023 Society for Industrial and Applied Mathematics, 2023, pp. 175–191.","ama":"Balliu A, Korhonen J, Kuhn F, et al. Sinkless Orientation Made Simple. In: Symposium on Simplicity in Algorithms. 2023 Society for Industrial and Applied Mathematics; 2023:175-191. doi:10.1137/1.9781611977585.ch17","mla":"Balliu, Alkida, et al. “Sinkless Orientation Made Simple.” Symposium on Simplicity in Algorithms, 2023 Society for Industrial and Applied Mathematics, 2023, pp. 175–91, doi:10.1137/1.9781611977585.ch17.","ista":"Balliu A, Korhonen J, Kuhn F, Lievonen H, Olivetti D, Pai S, Paz A, Rybicki J, Schmid S, Studený J, Suomela J, Uitto J. 2023.Sinkless Orientation Made Simple. In: Symposium on Simplicity in Algorithms. , 175–191.","chicago":"Balliu, Alkida, Janne Korhonen, Fabian Kuhn, Henrik Lievonen, Dennis Olivetti, Shreyas Pai, Ami Paz, et al. “Sinkless Orientation Made Simple.” In Symposium on Simplicity in Algorithms, 175–91. 2023 Society for Industrial and Applied Mathematics, 2023. https://doi.org/10.1137/1.9781611977585.ch17.","short":"A. Balliu, J. Korhonen, F. Kuhn, H. Lievonen, D. Olivetti, S. Pai, A. Paz, J. Rybicki, S. Schmid, J. Studený, J. Suomela, J. Uitto, in:, Symposium on Simplicity in Algorithms, 2023 Society for Industrial and Applied Mathematics, 2023, pp. 175–191."},"abstract":[{"text":"The sinkless orientation problem plays a key role in understanding the foundations of distributed computing. The problem can be used to separate two fundamental models of distributed graph algorithms, LOCAL and SLOCAL: the locality of sinkless orientation is Ω(log n) in the deterministic LOCAL model and O(log log n) in the deterministic SLOCAL model. Both of these results are known by prior work, but here we give new simple, self-contained proofs for them.","lang":"eng"}],"type":"book_chapter","quality_controlled":"1","publisher":"2023 Society for Industrial and Applied Mathematics","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2108.02655"}],"OA_type":"green","department":[{"_id":"DaAl"}],"oa_version":"Preprint","status":"public","language":[{"iso":"eng"}],"article_processing_charge":"No","author":[{"last_name":"Balliu","full_name":"Balliu, Alkida","first_name":"Alkida"},{"first_name":"Janne","id":"C5402D42-15BC-11E9-A202-CA2BE6697425","full_name":"Korhonen, Janne","last_name":"Korhonen"},{"first_name":"Fabian","full_name":"Kuhn, Fabian","last_name":"Kuhn"},{"last_name":"Lievonen","full_name":"Lievonen, Henrik","first_name":"Henrik"},{"last_name":"Olivetti","full_name":"Olivetti, Dennis","first_name":"Dennis"},{"full_name":"Pai, Shreyas","last_name":"Pai","first_name":"Shreyas"},{"first_name":"Ami","full_name":"Paz, Ami","last_name":"Paz"},{"first_name":"Joel","full_name":"Rybicki, Joel","last_name":"Rybicki","id":"334EFD2E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6432-6646"},{"first_name":"Stefan","full_name":"Schmid, Stefan","last_name":"Schmid"},{"first_name":"Jan","full_name":"Studený, Jan","last_name":"Studený"},{"first_name":"Jukka","full_name":"Suomela, Jukka","last_name":"Suomela"},{"last_name":"Uitto","full_name":"Uitto, Jara","first_name":"Jara"}],"title":"Sinkless Orientation Made Simple","page":"175-191","date_updated":"2025-09-24T09:24:20Z","acknowledgement":"We thank the anonymous reviewers for their helpful feedback on previous versions of this work. Parts ofthis work appeared in DISC 2021 as a brief announcement [ 21]. This work was supported in part by theEuropean Research Council (ERC) under the European Union’s Horizon 2020 research and innovationprogramme (grant agreement No 805223 ScaleML), the Academy of Finland (grant agreement No 333837),the Austrian Science Fund (FWF) and netIDEE (grant agreement No P 33775-N), and the AustrianScience Fund (FWF) project DELTA (grant agreement No I 5025-N).","year":"2023","publication_identifier":{"eisbn":["9781611977585"]},"ec_funded":1,"oa":1,"day":"12","doi":"10.1137/1.9781611977585.ch17","date_published":"2023-01-12T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","project":[{"grant_number":"805223","_id":"268A44D6-B435-11E9-9278-68D0E5697425","name":"Elastic Coordination for Scalable Machine Learning","call_identifier":"H2020"},{"_id":"bd9e3a2e-d553-11ed-ba76-8aa684ce17fe","name":"Fast Algorithms for a Reactive Network Layer","grant_number":"P33775"}],"OA_place":"repository","publication":"Symposium on Simplicity in Algorithms","arxiv":1},{"isi":1,"publication":"30th International Colloquium on Structural Information and Communication Complexity","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","project":[{"call_identifier":"H2020","name":"Formal Methods for Stochastic Models: Algorithms and Applications","_id":"0599E47C-7A3F-11EA-A408-12923DDC885E","grant_number":"863818"}],"date_published":"2023-05-25T00:00:00Z","intvolume":" 13892","day":"25","doi":"10.1007/978-3-031-32733-9_26","year":"2023","acknowledgement":"We thank Mahsa Bastankhah and Mohammad Ali Maddah-Ali for fruitful discussions about different variants of the problem. This work is supported by the European Research Council (ERC) Consolidator Project 864228 (AdjustNet), 2020-2025, the ERC CoG 863818 (ForM-SMArt), and the German Research Foundation (DFG) grant 470029389 (FlexNets), 2021–2024.","publication_identifier":{"issn":["0302-9743"],"isbn":["9783031327322"],"eissn":["1611-3349"],"eisbn":["9783031327339"]},"ec_funded":1,"date_updated":"2025-12-02T14:02:38Z","related_material":{"record":[{"status":"public","relation":"later_version","id":"14820"}]},"page":"576-594","title":"Weighted acket selection for rechargeable links in cryptocurrency networks: Complexity and approximation","author":[{"last_name":"Schmid","full_name":"Schmid, Stefan","first_name":"Stefan"},{"id":"130759D2-D7DD-11E9-87D2-DE0DE6697425","last_name":"Svoboda","full_name":"Svoboda, Jakub","orcid":"0000-0002-1419-3267","first_name":"Jakub"},{"first_name":"Michelle X","id":"2D82B818-F248-11E8-B48F-1D18A9856A87","full_name":"Yeo, Michelle X","last_name":"Yeo","orcid":"0009-0001-3676-4809"}],"article_processing_charge":"No","status":"public","language":[{"iso":"eng"}],"oa_version":"None","OA_type":"closed access","department":[{"_id":"KrCh"},{"_id":"KrPi"}],"volume":13892,"publisher":"Springer Nature","corr_author":"1","quality_controlled":"1","citation":{"short":"S. Schmid, J. Svoboda, M.X. Yeo, in:, 30th International Colloquium on Structural Information and Communication Complexity, Springer Nature, 2023, pp. 576–594.","ieee":"S. Schmid, J. Svoboda, and M. X. Yeo, “Weighted acket selection for rechargeable links in cryptocurrency networks: Complexity and approximation,” in 30th International Colloquium on Structural Information and Communication Complexity, Alcalá de Henares, Spain, 2023, vol. 13892, pp. 576–594.","ama":"Schmid S, Svoboda J, Yeo MX. Weighted acket selection for rechargeable links in cryptocurrency networks: Complexity and approximation. In: 30th International Colloquium on Structural Information and Communication Complexity. Vol 13892. Springer Nature; 2023:576-594. doi:10.1007/978-3-031-32733-9_26","apa":"Schmid, S., Svoboda, J., & Yeo, M. X. (2023). Weighted acket selection for rechargeable links in cryptocurrency networks: Complexity and approximation. In 30th International Colloquium on Structural Information and Communication Complexity (Vol. 13892, pp. 576–594). Alcalá de Henares, Spain: Springer Nature. https://doi.org/10.1007/978-3-031-32733-9_26","chicago":"Schmid, Stefan, Jakub Svoboda, and Michelle X Yeo. “Weighted Acket Selection for Rechargeable Links in Cryptocurrency Networks: Complexity and Approximation.” In 30th International Colloquium on Structural Information and Communication Complexity, 13892:576–94. Springer Nature, 2023. https://doi.org/10.1007/978-3-031-32733-9_26.","ista":"Schmid S, Svoboda J, Yeo MX. 2023. Weighted acket selection for rechargeable links in cryptocurrency networks: Complexity and approximation. 30th International Colloquium on Structural Information and Communication Complexity. SIROCCO: International Colloquium on Structural Information and Communication Complexity, LNCS, vol. 13892, 576–594.","mla":"Schmid, Stefan, et al. “Weighted Acket Selection for Rechargeable Links in Cryptocurrency Networks: Complexity and Approximation.” 30th International Colloquium on Structural Information and Communication Complexity, vol. 13892, Springer Nature, 2023, pp. 576–94, doi:10.1007/978-3-031-32733-9_26."},"type":"conference","abstract":[{"lang":"eng","text":"We consider a natural problem dealing with weighted packet selection across a rechargeable link, which e.g., finds applications in cryptocurrency networks. The capacity of a link (u, v) is determined by how much nodes u and v allocate for this link. Specifically, the input is a finite ordered sequence of packets that arrive in both directions along a link. Given (u, v) and a packet of weight x going from u to v, node u can either accept or reject the packet. If u accepts the packet, the capacity on link (u, v) decreases by x. Correspondingly, v’s capacity on (u, v) increases by x. If a node rejects the packet, this will entail a cost affinely linear in the weight of the packet. A link is “rechargeable” in the sense that the total capacity of the link has to remain constant, but the allocation of capacity at the ends of the link can depend arbitrarily on the nodes’ decisions. The goal is to minimise the sum of the capacity injected into the link and the cost of rejecting packets. We show that the problem is NP-hard, but can be approximated efficiently with a ratio of (1 + E) . (1 + square3) for some arbitrary E>0."}],"_id":"19985","scopus_import":"1","month":"05","date_created":"2025-07-10T13:15:43Z","publication_status":"published","alternative_title":["LNCS"],"external_id":{"isi":["001292782600026"]},"conference":{"start_date":"2023-06-06","location":"Alcalá de Henares, Spain","name":"SIROCCO: International Colloquium on Structural Information and Communication Complexity","end_date":"2023-06-09"}},{"title":"Multivariate Dirichlet moments and a polychromatic Ewens sampling formula","author":[{"full_name":"Dello Schiavo, Lorenzo","last_name":"Dello Schiavo","id":"ECEBF480-9E4F-11EA-B557-B0823DDC885E","orcid":"0000-0002-9881-6870","first_name":"Lorenzo"},{"orcid":"0009-0000-9773-1931","id":"3ebd6ba8-edfb-11eb-afb5-91a9745ba308","full_name":"Quattrocchi, Filippo","last_name":"Quattrocchi","first_name":"Filippo"}],"date_updated":"2025-11-24T13:53:48Z","language":[{"iso":"eng"}],"status":"public","article_processing_charge":"No","oa_version":"Preprint","keyword":["Dirichlet distribution","Ewens sampling formula","Hoppe urn model","colored partitions"],"publication":"arXiv","arxiv":1,"project":[{"grant_number":"E208","_id":"34dbf174-11ca-11ed-8bc3-afe9d43d4b9c","name":"Configuration Spaces over Non-Smooth Spaces"},{"call_identifier":"FWF","grant_number":"F06504","name":"Taming Complexity in Partial Differential Systems","_id":"260482E2-B435-11E9-9278-68D0E5697425"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","OA_place":"repository","oa":1,"day":"20","doi":"10.48550/arXiv.2309.11292","date_published":"2023-09-20T00:00:00Z","article_number":"2309.11292","acknowledgement":"This research was funded by the Austrian Science Fund (FWF) ESPRIT 208. For the purpose of open access, the authors have applied a CC BY public copyright licence to any Author Accepted Manuscript version arising from this submission. F.Q. gratefully acknowledges support by the Austrian Science Fund (FWF), Project SFB F65. The authors are grateful to Professor Nathanaël Berestycki for several helpful suggestions, and to Nicola Battisti and Dr. Elizabeth Hollwey for enlightening discussions on DNA-methylation.","year":"2023","_id":"20572","month":"09","publication_status":"draft","date_created":"2025-10-28T13:13:08Z","external_id":{"arxiv":["2309.11292"]},"OA_type":"green","department":[{"_id":"GradSch"},{"_id":"JaMa"}],"corr_author":"1","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2309.11292","open_access":"1"}],"citation":{"short":"L. Dello Schiavo, F. Quattrocchi, ArXiv (n.d.).","mla":"Dello Schiavo, Lorenzo, and Filippo Quattrocchi. “Multivariate Dirichlet Moments and a Polychromatic Ewens Sampling Formula.” ArXiv, 2309.11292, doi:10.48550/arXiv.2309.11292.","chicago":"Dello Schiavo, Lorenzo, and Filippo Quattrocchi. “Multivariate Dirichlet Moments and a Polychromatic Ewens Sampling Formula.” ArXiv, n.d. https://doi.org/10.48550/arXiv.2309.11292.","ista":"Dello Schiavo L, Quattrocchi F. Multivariate Dirichlet moments and a polychromatic Ewens sampling formula. arXiv, 2309.11292.","apa":"Dello Schiavo, L., & Quattrocchi, F. (n.d.). Multivariate Dirichlet moments and a polychromatic Ewens sampling formula. arXiv. https://doi.org/10.48550/arXiv.2309.11292","ama":"Dello Schiavo L, Quattrocchi F. Multivariate Dirichlet moments and a polychromatic Ewens sampling formula. arXiv. doi:10.48550/arXiv.2309.11292","ieee":"L. Dello Schiavo and F. Quattrocchi, “Multivariate Dirichlet moments and a polychromatic Ewens sampling formula,” arXiv. ."},"abstract":[{"text":"We present an elementary non-recursive formula for the multivariate moments\r\nof the Dirichlet distribution on the standard simplex, in terms of the pattern\r\ninventory of the moments' exponents. We obtain analog formulas for the\r\nmultivariate moments of the Dirichlet-Ferguson and Gamma measures. We further\r\nintroduce a polychromatic analogue of Ewens sampling formula on colored integer\r\npartitions, discuss its relation with suitable extensions of Hoppe's urn model\r\nand of the Chinese restaurant process, and prove that it satisfies an adapted\r\nnotion of consistency in the sense of Kingman.","lang":"eng"}],"type":"preprint"},{"publication":"arXiv","arxiv":1,"OA_type":"green","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2305.08811"}],"OA_place":"repository","type":"preprint","abstract":[{"lang":"eng","text":"We describe a sequence of smooth quotients of the Deligne-Mumford moduli space ${\\mathbb R}\\overline{\\mathcal M}_{0,\\ell+1}$ of real rational curves with $\\ell\\!+\\!1$ conjugate pairs of marked points that terminates at ${\\mathbb R}\\overline{\\mathcal M}_{0,\\ell}\\!\\times\\!{\\mathbb C}{\\mathbb P}^1$. This produces an analogue of Keel's blowup construction of the Deligne-Mumford moduli spaces $\\overline{\\mathcal M}_{\\ell+1}$ of rational curves with $\\ell\\!+\\!1$ marked points, but with an explicit description of the intermediate spaces and the blowups of three different types. The same framework readily adapts to the real moduli spaces with real points. In a sequel, we use this inductive construction of ${\\mathbb R}\\overline{\\mathcal M}_{0,\\ell+1}$ to completely determine the rational (co)homology ring of ${\\mathbb R}\\overline{\\mathcal M}_{0,\\ell}$."}],"day":"15","doi":"10.48550/ARXIV.2305.08811","extern":"1","citation":{"ista":"Chen X, Zinger A. Blowdowns of the Deligne-Mumford spaces of real rational curves. arXiv, 2305.08811.","chicago":"Chen, Xujia, and Aleksey Zinger. “Blowdowns of the Deligne-Mumford Spaces of Real Rational Curves.” ArXiv, n.d. https://doi.org/10.48550/ARXIV.2305.08811.","mla":"Chen, Xujia, and Aleksey Zinger. “Blowdowns of the Deligne-Mumford Spaces of Real Rational Curves.” ArXiv, 2305.08811, doi:10.48550/ARXIV.2305.08811.","ama":"Chen X, Zinger A. Blowdowns of the Deligne-Mumford spaces of real rational curves. arXiv. doi:10.48550/ARXIV.2305.08811","ieee":"X. Chen and A. Zinger, “Blowdowns of the Deligne-Mumford spaces of real rational curves,” arXiv. .","apa":"Chen, X., & Zinger, A. (n.d.). Blowdowns of the Deligne-Mumford spaces of real rational curves. arXiv. https://doi.org/10.48550/ARXIV.2305.08811","short":"X. Chen, A. Zinger, ArXiv (n.d.)."},"oa":1,"date_published":"2023-05-15T00:00:00Z","article_number":"2305.08811","year":"2023","author":[{"first_name":"Xujia","id":"968ad14a-fd86-11ee-a420-ea29715511a3","full_name":"Chen, Xujia","last_name":"Chen"},{"first_name":"Aleksey","full_name":"Zinger, Aleksey","last_name":"Zinger"}],"title":"Blowdowns of the Deligne-Mumford spaces of real rational curves","_id":"20624","date_updated":"2025-11-10T15:06:21Z","language":[{"iso":"eng"}],"month":"05","status":"public","article_processing_charge":"No","publication_status":"submitted","date_created":"2025-11-10T08:45:42Z","oa_version":"Preprint","external_id":{"arxiv":["2305.08811"]}},{"arxiv":1,"publication":"arXiv","OA_type":"green","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2305.08798"}],"OA_place":"repository","type":"preprint","abstract":[{"lang":"eng","text":"It is a long-established and heavily-used fact that the integral cohomology ring of the Deligne-Mumford moduli space of (complex) rational curves is the polynomial ring on the boundary divisors modulo the ideal generated by the obvious geometric relations between them. We show that the rational cohomology ring of the Deligne-Mumford moduli space of real rational curves with conjugate marked points only is the polynomial ring on certain (``complex\") boundary divisors and real boundary hypersurfaces modulo the ideal generated by the obvious geometric relations between them and the geometric relation in positive dimension and codimension identified in a previous paper."}],"doi":"10.48550/ARXIV.2305.08798","extern":"1","day":"15","oa":1,"citation":{"mla":"Chen, Xujia, et al. “The Cohomology Ring of the Deligne-Mumford Moduli Space of Real Rational Curves with Conjugate Marked Points.” ArXiv, 2305.08798, doi:10.48550/ARXIV.2305.08798.","ista":"Chen X, Georgieva P, Zinger A. The cohomology ring of the Deligne-Mumford moduli space of real rational curves with conjugate marked points. arXiv, 2305.08798.","chicago":"Chen, Xujia, Penka Georgieva, and Aleksey Zinger. “The Cohomology Ring of the Deligne-Mumford Moduli Space of Real Rational Curves with Conjugate Marked Points.” ArXiv, n.d. https://doi.org/10.48550/ARXIV.2305.08798.","ieee":"X. Chen, P. Georgieva, and A. Zinger, “The cohomology ring of the Deligne-Mumford moduli space of real rational curves with conjugate marked points,” arXiv. .","apa":"Chen, X., Georgieva, P., & Zinger, A. (n.d.). The cohomology ring of the Deligne-Mumford moduli space of real rational curves with conjugate marked points. arXiv. https://doi.org/10.48550/ARXIV.2305.08798","ama":"Chen X, Georgieva P, Zinger A. The cohomology ring of the Deligne-Mumford moduli space of real rational curves with conjugate marked points. arXiv. doi:10.48550/ARXIV.2305.08798","short":"X. Chen, P. Georgieva, A. Zinger, ArXiv (n.d.)."},"date_published":"2023-05-15T00:00:00Z","article_number":"2305.08798","year":"2023","title":"The cohomology ring of the Deligne-Mumford moduli space of real rational curves with conjugate marked points","author":[{"id":"968ad14a-fd86-11ee-a420-ea29715511a3","full_name":"Chen, Xujia","last_name":"Chen","first_name":"Xujia"},{"first_name":"Penka","last_name":"Georgieva","full_name":"Georgieva, Penka"},{"last_name":"Zinger","full_name":"Zinger, Aleksey","first_name":"Aleksey"}],"_id":"20625","date_updated":"2025-11-10T15:05:04Z","language":[{"iso":"eng"}],"status":"public","month":"05","article_processing_charge":"No","publication_status":"submitted","date_created":"2025-11-10T08:46:11Z","oa_version":"Preprint","external_id":{"arxiv":["2305.08798"]}}]