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Data from: Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster. 2023. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:12933\">10.15479/AT:ISTA:12933</a>","mla":"Puixeu Sala, Gemma. <i>Data from: Sex-Specific Estimation of Cis and Trans Regulation of Gene Expression in Heads and Gonads of Drosophila Melanogaster</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:12933\">10.15479/AT:ISTA:12933</a>.","chicago":"Puixeu Sala, Gemma. “Data from: Sex-Specific Estimation of Cis and Trans Regulation of Gene Expression in Heads and Gonads of Drosophila Melanogaster.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/AT:ISTA:12933\">https://doi.org/10.15479/AT:ISTA:12933</a>."},"month":"05","corr_author":"1","publisher":"Institute of Science and Technology Austria","day":"15","file":[{"file_id":"12934","creator":"gpuixeus","file_name":"Dataset_S1.csv","date_created":"2023-05-10T09:41:43Z","file_size":8029982,"checksum":"0ba0bcd0bb8b18d84792136a4370df90","access_level":"open_access","date_updated":"2023-05-10T09:41:43Z","success":1,"content_type":"text/csv","relation":"main_file"},{"creator":"gpuixeus","file_id":"12935","date_created":"2023-05-10T09:41:43Z","file_size":13667640,"checksum":"a62aa9a6d4904e0fdb699cf752640863","file_name":"Dataset_S2.csv","success":1,"date_updated":"2023-05-10T09:41:43Z","access_level":"open_access","relation":"main_file","content_type":"text/csv"},{"content_type":"text/csv","relation":"main_file","access_level":"open_access","date_updated":"2023-05-10T09:41:48Z","success":1,"file_name":"Dataset_S3.csv","checksum":"e20ea7f4f8a9bdf1b3849a44664ae58b","file_size":8369141,"date_created":"2023-05-10T09:41:48Z","file_id":"12936","creator":"gpuixeus"},{"file_name":"Dataset_S4.csv","checksum":"f6156e5fc44446c907ddd0d7289d4cf8","file_size":19543247,"date_created":"2023-05-10T09:41:50Z","file_id":"12937","creator":"gpuixeus","content_type":"text/csv","relation":"main_file","date_updated":"2023-05-10T09:41:50Z","access_level":"open_access","success":1},{"success":1,"access_level":"open_access","date_updated":"2023-05-11T12:50:18Z","relation":"main_file","content_type":"text/plain","creator":"gpuixeus","file_id":"12944","date_created":"2023-05-11T12:50:18Z","file_size":4566,"checksum":"ae9f54c77a1c42b666ae6c1dfd33ac86","file_name":"readme.txt"}],"department":[{"_id":"GradSch"},{"_id":"NiBa"},{"_id":"BeVi"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","doi":"10.15479/AT:ISTA:12933","contributor":[{"first_name":"Ariana","id":"2A0848E2-F248-11E8-B48F-1D18A9856A87","last_name":"Macon"},{"first_name":"Beatriz","id":"49E1C5C6-F248-11E8-B48F-1D18A9856A87","last_name":"Vicoso","orcid":"0000-0002-4579-8306"}],"author":[{"orcid":"0000-0001-8330-1754","first_name":"Gemma","id":"33AB266C-F248-11E8-B48F-1D18A9856A87","last_name":"Puixeu Sala","full_name":"Puixeu Sala, Gemma"}],"oa_version":"Published Version","title":"Data from: Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster","abstract":[{"lang":"eng","text":"Datasets of the publication \"Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster\"."}],"type":"research_data","related_material":{"record":[{"id":"14077","relation":"used_in_publication","status":"public"},{"relation":"used_in_publication","id":"14058","status":"public"}]},"has_accepted_license":"1","date_published":"2023-05-15T00:00:00Z","date_created":"2023-05-10T10:00:49Z","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"ddc":["570"],"article_processing_charge":"No"},{"publication_status":"published","status":"public","acknowledged_ssus":[{"_id":"EM-Fac"},{"_id":"NanoFab"}],"doi":"10.15479/at:ista:12885","department":[{"_id":"GradSch"},{"_id":"MaIb"}],"user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","project":[{"call_identifier":"H2020","_id":"2564DBCA-B435-11E9-9278-68D0E5697425","grant_number":"665385","name":"International IST Doctoral Program"}],"day":"28","file_date_updated":"2023-05-02T07:43:18Z","oa":1,"degree_awarded":"PhD","supervisor":[{"orcid":"0000-0001-5013-2843","full_name":"Ibáñez, Maria","first_name":"Maria","id":"43C61214-F248-11E8-B48F-1D18A9856A87","last_name":"Ibáñez"}],"oa_version":"Published Version","date_created":"2023-05-02T07:58:57Z","related_material":{"record":[{"relation":"part_of_dissertation","id":"12237","status":"public"},{"status":"public","relation":"part_of_dissertation","id":"10806"},{"status":"public","id":"10123","relation":"part_of_dissertation"},{"status":"public","relation":"part_of_dissertation","id":"10042"},{"status":"public","id":"9118","relation":"part_of_dissertation"}]},"abstract":[{"text":"High-performance semiconductors rely upon precise control of heat and charge transport. This can be achieved by precisely engineering defects in polycrystalline solids. There are multiple approaches to preparing such polycrystalline semiconductors, and the transformation of solution-processed colloidal nanoparticles is appealing because colloidal nanoparticles combine low cost with structural and compositional tunability along with rich surface chemistry. However, the multiple processes from nanoparticle synthesis to the final bulk nanocomposites are very complex. They involve nanoparticle purification, post-synthetic modifications, and finally consolidation (thermal treatments and densification). All these properties dictate the final material’s composition and microstructure, ultimately affecting its functional properties. This thesis explores the synthesis, surface chemistry and consolidation of colloidal semiconductor nanoparticles into dense solids. In particular, the transformations that take place during these processes, and their effect on the material’s transport properties are evaluated. ","lang":"eng"}],"publisher":"Institute of Science and Technology Austria","corr_author":"1","language":[{"iso":"eng"}],"month":"04","page":"82","_id":"12885","citation":{"chicago":"Calcabrini, Mariano. “Nanoparticle-Based Semiconductor Solids: From Synthesis to Consolidation.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/at:ista:12885\">https://doi.org/10.15479/at:ista:12885</a>.","ista":"Calcabrini M. 2023. Nanoparticle-based semiconductor solids: From synthesis to consolidation. Institute of Science and Technology Austria.","apa":"Calcabrini, M. (2023). <i>Nanoparticle-based semiconductor solids: From synthesis to consolidation</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:12885\">https://doi.org/10.15479/at:ista:12885</a>","short":"M. Calcabrini, Nanoparticle-Based Semiconductor Solids: From Synthesis to Consolidation, Institute of Science and Technology Austria, 2023.","ieee":"M. Calcabrini, “Nanoparticle-based semiconductor solids: From synthesis to consolidation,” Institute of Science and Technology Austria, 2023.","ama":"Calcabrini M. Nanoparticle-based semiconductor solids: From synthesis to consolidation. 2023. doi:<a href=\"https://doi.org/10.15479/at:ista:12885\">10.15479/at:ista:12885</a>","mla":"Calcabrini, Mariano. <i>Nanoparticle-Based Semiconductor Solids: From Synthesis to Consolidation</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/at:ista:12885\">10.15479/at:ista:12885</a>."},"date_updated":"2026-04-07T13:26:14Z","file":[{"date_updated":"2023-05-02T07:43:18Z","access_level":"closed","content_type":"application/vnd.openxmlformats-officedocument.wordprocessingml.document","relation":"source_file","file_id":"12887","creator":"mcalcabr","file_name":"Thesis_Calcabrini.docx","date_created":"2023-05-02T07:43:18Z","checksum":"9347b0e09425f56fdcede5d3528404dc","file_size":99627036},{"content_type":"application/pdf","relation":"main_file","date_updated":"2023-05-02T07:42:45Z","access_level":"open_access","success":1,"file_name":"Thesis_Calcabrini_pdfa.pdf","file_size":8742220,"checksum":"2d188b76621086cd384f0b9264b0a576","date_created":"2023-05-02T07:42:45Z","file_id":"12888","creator":"mcalcabr"}],"OA_place":"publisher","year":"2023","ddc":["546","541"],"article_processing_charge":"No","publication_identifier":{"isbn":["978-3-99078-028-2"],"issn":["2663-337X"]},"ec_funded":1,"alternative_title":["ISTA Thesis"],"title":"Nanoparticle-based semiconductor solids: From synthesis to consolidation","author":[{"orcid":"0000-0003-4566-5877","full_name":"Calcabrini, Mariano","last_name":"Calcabrini","first_name":"Mariano","id":"45D7531A-F248-11E8-B48F-1D18A9856A87"}],"date_published":"2023-04-28T00:00:00Z","type":"dissertation","has_accepted_license":"1"},{"oa":1,"file_date_updated":"2023-03-23T16:43:14Z","day":"21","project":[{"name":"Non-Ergodic Quantum Matter: Universality, Dynamics and Control","call_identifier":"H2020","grant_number":"850899","_id":"23841C26-32DE-11EA-91FC-C7463DDC885E"}],"user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","department":[{"_id":"GradSch"},{"_id":"MaSe"}],"acknowledged_ssus":[{"_id":"ScienComp"}],"doi":"10.15479/at:ista:12732","status":"public","publication_status":"published","abstract":[{"text":"Nonergodic systems, whose out-of-equilibrium dynamics fail to thermalize, provide a fascinating research direction both for fundamental reasons and for application in state of the art quantum devices.\r\nGoing beyond the description of statistical mechanics, ergodicity breaking yields a new paradigm in quantum many-body physics, introducing novel phases of matter with no counterpart at equilibrium.\r\nIn this Thesis, we address different open questions in the field, focusing on disorder-induced many-body localization (MBL) and on weak ergodicity breaking in kinetically constrained models.\r\nIn particular, we contribute to the debate about transport in kinetically constrained models, studying the effect of $U(1)$ conservation and inversion-symmetry breaking in a family of quantum East models.\r\nUsing tensor network techniques, we analyze the dynamics of large MBL systems beyond the limit of exact numerical methods.\r\nIn this setting, we approach the debated topic of the coexistence of localized and thermal eigenstates separated by energy thresholds known as many-body mobility edges.\r\nInspired by recent experiments, our work further investigates the localization of a small bath induced by the coupling to a large localized chain, the so-called MBL proximity effect.\r\n\r\nIn the first Chapter, we introduce a family of particle-conserving kinetically constrained models, inspired by the quantum East model.\r\nThe system we study features strong inversion-symmetry breaking, due to the nature of the correlated hopping.\r\nWe show that these models host so-called quantum Hilbert space fragmentation, consisting of disconnected subsectors in an entangled basis, and further provide an analytical description of this phenomenon.\r\nWe further probe its effect on dynamics of simple product states, showing revivals in fidelity and local observalbes.\r\nThe study of dynamics within the largest subsector reveals an anomalous transient superdiffusive behavior crossing over to slow logarithmic dynamics at later times.\r\nThis work suggests that particle conserving constrained models with inversion-symmetry breaking realize new universality classes of dynamics and invite their further theoretical and experimental studies.\r\n\r\nNext, we use kinetic constraints and disorder to design a model with many-body mobility edges in particle density.\r\nThis feature allows to study the dynamics of localized and thermal states in large systems beyond the limitations of previous studies.\r\nThe time-evolution shows typical signatures of localization at small densities, replaced by thermal behavior at larger densities.\r\nOur results provide evidence in favor of the stability of many-body mobility edges, which was recently challenged by a theoretical argument.\r\nTo support our findings, we probe the mechanism proposed as a cause of delocalization in many-body localized systems with mobility edges suggesting its ineffectiveness in the model studied.\r\n\r\nIn the last Chapter of this Thesis, we address the topic of many-body localization proximity effect.\r\nWe study a model inspired by recent experiments, featuring Anderson localized coupled to a small bath of free hard-core bosons.\r\nThe interaction among the two particle species results in non-trivial dynamics, which we probe using tensor network techniques.\r\nOur simulations show convincing evidence of many-body localization proximity effect when the bath is composed by a single free particle and interactions are strong.\r\nWe furthter observe an anomalous entanglement dynamics, which we explain through a phenomenological theory.\r\nFinally, we extract highly excited eigenstates of large systems, providing supplementary evidence in favor of our findings.","lang":"eng"}],"related_material":{"record":[{"relation":"part_of_dissertation","id":"12750","status":"public"},{"relation":"part_of_dissertation","id":"11470","status":"public"},{"id":"8308","relation":"part_of_dissertation","status":"public"},{"status":"public","relation":"part_of_dissertation","id":"11469"}]},"date_created":"2023-03-17T13:30:48Z","oa_version":"Published Version","supervisor":[{"orcid":"0000-0002-2399-5827","full_name":"Serbyn, Maksym","last_name":"Serbyn","first_name":"Maksym","id":"47809E7E-F248-11E8-B48F-1D18A9856A87"}],"tmp":{"name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)","image":"/images/cc_by_nc_sa.png","short":"CC BY-NC-SA (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode"},"degree_awarded":"PhD","year":"2023","OA_place":"publisher","file":[{"creator":"pbrighi","file_id":"12753","date_created":"2023-03-23T16:42:56Z","checksum":"5d2de651ef9449c1b8dc27148ca74777","file_size":42167561,"file_name":"Thesis_sub_PBrighi.zip","date_updated":"2023-03-23T16:42:56Z","access_level":"closed","relation":"source_file","content_type":"application/zip"},{"file_id":"12754","creator":"pbrighi","file_name":"Thesis_PBrighi.pdf","date_created":"2023-03-23T16:43:14Z","file_size":13977000,"checksum":"7caa153d4a5b0873a79358787d2dfe1e","access_level":"open_access","date_updated":"2023-03-23T16:43:14Z","success":1,"content_type":"application/pdf","relation":"main_file"}],"page":"158","_id":"12732","date_updated":"2026-04-07T13:26:32Z","citation":{"chicago":"Brighi, Pietro. “Ergodicity Breaking in Disordered and Kinetically Constrained Quantum Many-Body Systems.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/at:ista:12732\">https://doi.org/10.15479/at:ista:12732</a>.","mla":"Brighi, Pietro. <i>Ergodicity Breaking in Disordered and Kinetically Constrained Quantum Many-Body Systems</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/at:ista:12732\">10.15479/at:ista:12732</a>.","ama":"Brighi P. Ergodicity breaking in disordered and kinetically constrained quantum many-body systems. 2023. doi:<a href=\"https://doi.org/10.15479/at:ista:12732\">10.15479/at:ista:12732</a>","ieee":"P. Brighi, “Ergodicity breaking in disordered and kinetically constrained quantum many-body systems,” Institute of Science and Technology Austria, 2023.","short":"P. Brighi, Ergodicity Breaking in Disordered and Kinetically Constrained Quantum Many-Body Systems, Institute of Science and Technology Austria, 2023.","apa":"Brighi, P. (2023). <i>Ergodicity breaking in disordered and kinetically constrained quantum many-body systems</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:12732\">https://doi.org/10.15479/at:ista:12732</a>","ista":"Brighi P. 2023. Ergodicity breaking in disordered and kinetically constrained quantum many-body systems. Institute of Science and Technology Austria."},"month":"03","language":[{"iso":"eng"}],"corr_author":"1","publisher":"Institute of Science and Technology Austria","has_accepted_license":"1","type":"dissertation","date_published":"2023-03-21T00:00:00Z","author":[{"orcid":"0000-0002-7969-2729","full_name":"Brighi, Pietro","first_name":"Pietro","id":"4115AF5C-F248-11E8-B48F-1D18A9856A87","last_name":"Brighi"}],"alternative_title":["ISTA Thesis"],"title":"Ergodicity breaking in disordered and kinetically constrained quantum many-body systems","ec_funded":1,"publication_identifier":{"issn":["2663-337X"]},"article_processing_charge":"No","ddc":["530"]},{"author":[{"orcid":"0000-0001-7660-444X","full_name":"Pokusaeva, Victoria","last_name":"Pokusaeva","first_name":"Victoria","id":"3184041C-F248-11E8-B48F-1D18A9856A87"}],"alternative_title":["ISTA Thesis"],"title":"Neural control of optic flow-based navigation in Drosophila melanogaster","ec_funded":1,"has_accepted_license":"1","type":"dissertation","date_published":"2023-04-18T00:00:00Z","ddc":["570","571"],"publication_identifier":{"issn":["2663-337X"]},"article_processing_charge":"No","OA_place":"publisher","year":"2023","date_updated":"2026-04-07T13:26:49Z","_id":"12826","citation":{"chicago":"Pokusaeva, Victoria. “Neural Control of Optic Flow-Based Navigation in Drosophila Melanogaster.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/at:ista:12826\">https://doi.org/10.15479/at:ista:12826</a>.","mla":"Pokusaeva, Victoria. <i>Neural Control of Optic Flow-Based Navigation in Drosophila Melanogaster</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/at:ista:12826\">10.15479/at:ista:12826</a>.","ama":"Pokusaeva V. Neural control of optic flow-based navigation in Drosophila melanogaster. 2023. doi:<a href=\"https://doi.org/10.15479/at:ista:12826\">10.15479/at:ista:12826</a>","ieee":"V. Pokusaeva, “Neural control of optic flow-based navigation in Drosophila melanogaster,” Institute of Science and Technology Austria, 2023.","short":"V. Pokusaeva, Neural Control of Optic Flow-Based Navigation in Drosophila Melanogaster, Institute of Science and Technology Austria, 2023.","apa":"Pokusaeva, V. (2023). <i>Neural control of optic flow-based navigation in Drosophila melanogaster</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:12826\">https://doi.org/10.15479/at:ista:12826</a>","ista":"Pokusaeva V. 2023. Neural control of optic flow-based navigation in Drosophila melanogaster. Institute of Science and Technology Austria."},"page":"106","month":"04","language":[{"iso":"eng"}],"corr_author":"1","publisher":"Institute of Science and Technology Austria","file":[{"file_name":"Thesis_Pokusaeva.docx","date_created":"2023-04-20T09:14:38Z","file_size":14507243,"checksum":"5f589a9af025f7eeebfd0c186209913e","file_id":"12857","creator":"vpokusae","content_type":"application/vnd.openxmlformats-officedocument.wordprocessingml.document","relation":"source_file","access_level":"closed","date_updated":"2023-04-20T09:26:51Z"},{"relation":"main_file","content_type":"application/pdf","success":1,"date_updated":"2023-04-20T09:14:44Z","access_level":"open_access","date_created":"2023-04-20T09:14:44Z","checksum":"bbeed76db45a996b4c91a9abe12ce0ec","file_size":10090711,"file_name":"Thesis_Pokusaeva.pdf","creator":"vpokusae","file_id":"12858"}],"oa_version":"Published Version","supervisor":[{"full_name":"Jösch, Maximilian A","last_name":"Jösch","first_name":"Maximilian A","id":"2BD278E6-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-3937-1330"}],"abstract":[{"lang":"eng","text":"During navigation, animals can infer the structure of the environment by computing the optic flow cues elicited by their own movements, and subsequently use this information to instruct proper locomotor actions. These computations require a panoramic assessment of the visual environment in order to disambiguate similar sensory experiences that may require distinct behavioral responses. The estimation of the global motion patterns is therefore essential for successful navigation. Yet, our understanding of the algorithms and implementations that enable coherent panoramic visual perception remains scarce. Here I pursue this problem by dissecting the functional aspects of interneuronal communication in the lobula plate tangential cell network in Drosophila melanogaster. The results presented in the thesis demonstrate that the basis for effective interpretation of the optic flow in this circuit are stereotyped synaptic connections that mediate the formation of distinct subnetworks, each extracting a particular pattern of global motion. \r\nFirstly, I show that gap junctions are essential for a correct interpretation of binocular motion cues by horizontal motion-sensitive cells. HS cells form electrical synapses with contralateral H2 neurons that are involved in detecting yaw rotation and translation. I developed an FlpStop-mediated mutant of a gap junction protein ShakB that disrupts these electrical synapses. While the loss of electrical synapses does not affect the tuning of the direction selectivity in HS neurons, it severely alters their sensitivity to horizontal motion in the contralateral side. These physiological changes result in an inappropriate integration of binocular motion cues in walking animals. While wild-type flies form a binocular perception of visual motion by non-linear integration of monocular optic flow cues, the mutant flies sum the monocular inputs linearly. These results indicate that rather than averaging signals in neighboring neurons, gap-junctions operate in conjunction with chemical synapses to mediate complex non-linear optic flow computations.\r\nSecondly, I show that stochastic manipulation of neuronal activity in the lobula plate tangential cell network is a powerful approach to study the neuronal implementation of optic flow-based navigation in flies. Tangential neurons form multiple subnetworks, each mediating course-stabilizing response to a particular global pattern of visual motion. Application of genetic mosaic techniques can provide sparse optogenetic activation of HS cells in numerous combinations. These distinct combinations of activated neurons drive an array of distinct behavioral responses, providing important insights into how visuomotor transformation is performed in the lobula plate tangential cell network. This approach can be complemented by stochastic silencing of tangential neurons, enabling direct assessment of the functional role of individual tangential neurons in the processing of specific visual motion patterns.\r\n\tTaken together, the findings presented in this thesis suggest that establishing specific activity patterns of tangential cells via stereotyped synaptic connectivity is a key to efficient optic flow-based navigation in Drosophila melanogaster."}],"date_created":"2023-04-14T14:56:04Z","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"degree_awarded":"PhD","oa":1,"file_date_updated":"2023-04-20T09:26:51Z","status":"public","publication_status":"published","day":"18","project":[{"name":"International IST Doctoral Program","call_identifier":"H2020","grant_number":"665385","_id":"2564DBCA-B435-11E9-9278-68D0E5697425"}],"department":[{"_id":"MaJö"},{"_id":"GradSch"}],"user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","acknowledged_ssus":[{"_id":"Bio"},{"_id":"LifeSc"}],"doi":"10.15479/at:ista:12826"},{"publication_status":"published","status":"public","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","department":[{"_id":"GradSch"},{"_id":"RoSe"}],"doi":"10.15479/at:ista:14374","day":"30","project":[{"name":"Analysis of quantum many-body systems","call_identifier":"H2020","_id":"25C6DC12-B435-11E9-9278-68D0E5697425","grant_number":"694227"},{"name":"Mathematical Challenges in BCS Theory of Superconductivity","_id":"bda63fe5-d553-11ed-ba76-a16e3d2f256b","grant_number":"I06427"}],"oa":1,"file_date_updated":"2023-10-06T11:38:01Z","degree_awarded":"PhD","tmp":{"name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)","image":"/images/cc_by_nc_sa.png","short":"CC BY-NC-SA (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode"},"oa_version":"Published Version","supervisor":[{"orcid":"0000-0002-6781-0521","full_name":"Seiringer, Robert","last_name":"Seiringer","first_name":"Robert","id":"4AFD0470-F248-11E8-B48F-1D18A9856A87"}],"date_created":"2023-09-28T14:23:04Z","abstract":[{"lang":"eng","text":"Superconductivity has many important applications ranging from levitating trains over qubits to MRI scanners. The phenomenon is successfully modeled by Bardeen-Cooper-Schrieffer (BCS) theory. From a mathematical perspective, BCS theory has been studied extensively for systems without boundary. However, little is known in the presence of boundaries. With the help of numerical methods physicists observed that the critical temperature may increase in the presence of a boundary. The goal of this thesis is to understand the influence of boundaries on the critical temperature in BCS theory and to give a first rigorous justification of these observations. On the way, we also study two-body Schrödinger operators on domains with boundaries and prove additional results for superconductors without boundary.\r\n\r\nBCS theory is based on a non-linear functional, where the minimizer indicates whether the system is superconducting or in the normal, non-superconducting state. By considering the Hessian of the BCS functional at the normal state, one can analyze whether the normal state is possibly a minimum of the BCS functional and estimate the critical temperature. The Hessian turns out to be a linear operator resembling a Schrödinger operator for two interacting particles, but with more complicated kinetic energy. As a first step, we study the two-body Schrödinger operator in the presence of boundaries.\r\nFor Neumann boundary conditions, we prove that the addition of a boundary can create new eigenvalues, which correspond to the two particles forming a bound state close to the boundary.\r\n\r\nSecond, we need to understand superconductivity in the translation invariant setting. While in three dimensions this has been extensively studied, there is no mathematical literature for the one and two dimensional cases. In dimensions one and two, we compute the weak coupling asymptotics of the critical temperature and the energy gap  in the translation invariant setting. We also prove that their ratio is independent of the microscopic details of the model in the weak coupling limit; this property is referred to as universality.\r\n\r\nIn the third part, we study the critical temperature of superconductors in the presence of boundaries. We start by considering the one-dimensional case of a half-line with contact interaction. Then, we generalize the results to generic interactions and half-spaces in one, two and three dimensions. Finally, we compare the critical temperature of a quarter space in two dimensions to the critical temperatures of a half-space and of the full space."}],"related_material":{"record":[{"status":"public","relation":"part_of_dissertation","id":"10850"},{"id":"13207","relation":"part_of_dissertation","status":"public"}]},"language":[{"iso":"eng"}],"corr_author":"1","publisher":"Institute of Science and Technology Austria","citation":{"apa":"Roos, B. (2023). <i>Boundary superconductivity in BCS theory</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:14374\">https://doi.org/10.15479/at:ista:14374</a>","short":"B. Roos, Boundary Superconductivity in BCS Theory, Institute of Science and Technology Austria, 2023.","ista":"Roos B. 2023. Boundary superconductivity in BCS theory. Institute of Science and Technology Austria.","ama":"Roos B. Boundary superconductivity in BCS theory. 2023. doi:<a href=\"https://doi.org/10.15479/at:ista:14374\">10.15479/at:ista:14374</a>","mla":"Roos, Barbara. <i>Boundary Superconductivity in BCS Theory</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/at:ista:14374\">10.15479/at:ista:14374</a>.","ieee":"B. Roos, “Boundary superconductivity in BCS theory,” Institute of Science and Technology Austria, 2023.","chicago":"Roos, Barbara. “Boundary Superconductivity in BCS Theory.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/at:ista:14374\">https://doi.org/10.15479/at:ista:14374</a>."},"_id":"14374","page":"206","date_updated":"2026-04-07T13:27:39Z","month":"09","file":[{"date_updated":"2023-10-06T11:35:56Z","access_level":"open_access","content_type":"application/pdf","relation":"main_file","file_id":"14398","creator":"broos","file_name":"phd-thesis-draft_pdfa_acrobat.pdf","date_created":"2023-10-06T11:35:56Z","file_size":2365702,"checksum":"ef039ffc3de2cb8dee5b14110938e9b6"},{"access_level":"closed","date_updated":"2023-10-06T11:38:01Z","relation":"source_file","content_type":"application/x-zip-compressed","creator":"broos","file_id":"14399","file_size":4691734,"checksum":"81dcac33daeefaf0111db52f41bb1fd0","date_created":"2023-10-06T11:38:01Z","file_name":"Version5.zip"}],"OA_place":"publisher","year":"2023","ddc":["515","539"],"article_processing_charge":"No","publication_identifier":{"issn":["2663-337X"]},"ec_funded":1,"author":[{"full_name":"Roos, Barbara","first_name":"Barbara","id":"5DA90512-D80F-11E9-8994-2E2EE6697425","last_name":"Roos","orcid":"0000-0002-9071-5880"}],"alternative_title":["ISTA Thesis"],"title":"Boundary superconductivity in BCS theory","date_published":"2023-09-30T00:00:00Z","type":"dissertation","has_accepted_license":"1"},{"ddc":["530"],"publication":"Journal of Spectral Theory","publication_identifier":{"eissn":["1664-0403"],"issn":["1664-039X"]},"quality_controlled":"1","article_processing_charge":"No","title":"Boundary superconductivity in the BCS model","author":[{"full_name":"Hainzl, Christian","first_name":"Christian","last_name":"Hainzl"},{"orcid":"0000-0002-9071-5880","full_name":"Roos, Barbara","first_name":"Barbara","id":"5DA90512-D80F-11E9-8994-2E2EE6697425","last_name":"Roos"},{"orcid":"0000-0002-6781-0521","id":"4AFD0470-F248-11E8-B48F-1D18A9856A87","first_name":"Robert","last_name":"Seiringer","full_name":"Seiringer, Robert"}],"isi":1,"ec_funded":1,"arxiv":1,"type":"journal_article","has_accepted_license":"1","date_published":"2023-05-18T00:00:00Z","month":"05","citation":{"chicago":"Hainzl, Christian, Barbara Roos, and Robert Seiringer. “Boundary Superconductivity in the BCS Model.” <i>Journal of Spectral Theory</i>. EMS Press, 2023. <a href=\"https://doi.org/10.4171/JST/439\">https://doi.org/10.4171/JST/439</a>.","ista":"Hainzl C, Roos B, Seiringer R. 2023. Boundary superconductivity in the BCS model. Journal of Spectral Theory. 12(4), 1507–1540.","apa":"Hainzl, C., Roos, B., &#38; Seiringer, R. (2023). Boundary superconductivity in the BCS model. <i>Journal of Spectral Theory</i>. EMS Press. <a href=\"https://doi.org/10.4171/JST/439\">https://doi.org/10.4171/JST/439</a>","short":"C. Hainzl, B. Roos, R. Seiringer, Journal of Spectral Theory 12 (2023) 1507–1540.","ieee":"C. Hainzl, B. Roos, and R. Seiringer, “Boundary superconductivity in the BCS model,” <i>Journal of Spectral Theory</i>, vol. 12, no. 4. EMS Press, pp. 1507–1540, 2023.","mla":"Hainzl, Christian, et al. “Boundary Superconductivity in the BCS Model.” <i>Journal of Spectral Theory</i>, vol. 12, no. 4, EMS Press, 2023, pp. 1507–1540, doi:<a href=\"https://doi.org/10.4171/JST/439\">10.4171/JST/439</a>.","ama":"Hainzl C, Roos B, Seiringer R. Boundary superconductivity in the BCS model. <i>Journal of Spectral Theory</i>. 2023;12(4):1507–1540. doi:<a href=\"https://doi.org/10.4171/JST/439\">10.4171/JST/439</a>"},"_id":"13207","date_updated":"2026-04-07T13:27:39Z","page":"1507–1540","corr_author":"1","publisher":"EMS Press","language":[{"iso":"eng"}],"file":[{"relation":"main_file","content_type":"application/pdf","success":1,"access_level":"open_access","date_updated":"2023-07-11T08:19:15Z","file_size":304619,"checksum":"5501da33be010b5c81440438287584d5","date_created":"2023-07-11T08:19:15Z","file_name":"2023_EMS_Hainzl.pdf","creator":"alisjak","file_id":"13208"}],"acknowledgement":"We thank Egor Babaev for encouraging us to study this problem, and Rupert Frank for many fruitful discussions. scussions. Funding. Funding from the European Union’s Horizon 2020 research and innovation programme under the ERC grant agreement No. 694227 (Barbara Roos and Robert Seiringer) is gratefully acknowledged.","year":"2023","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"external_id":{"arxiv":["2201.08090"],"isi":["000997933500008"]},"scopus_import":"1","intvolume":"        12","oa_version":"Published Version","related_material":{"record":[{"status":"public","id":"14374","relation":"dissertation_contains"}]},"abstract":[{"lang":"eng","text":"We consider the linear BCS equation, determining the BCS critical temperature, in the presence of a boundary, where Dirichlet boundary conditions are imposed. In the one-dimensional case with point interactions, we prove that the critical temperature is strictly larger than the bulk value, at least at weak coupling. In particular, the Cooper-pair wave function localizes near the boundary, an effect that cannot be modeled by effective Neumann boundary conditions on the order parameter as often imposed in Ginzburg–Landau theory. We also show that the relative shift in critical temperature vanishes if the coupling constant either goes to zero or to infinity."}],"date_created":"2023-07-10T16:35:45Z","volume":12,"article_type":"original","status":"public","publication_status":"published","project":[{"name":"Analysis of quantum many-body systems","call_identifier":"H2020","_id":"25C6DC12-B435-11E9-9278-68D0E5697425","grant_number":"694227"}],"day":"18","doi":"10.4171/JST/439","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","department":[{"_id":"GradSch"},{"_id":"RoSe"}],"issue":"4","file_date_updated":"2023-07-11T08:19:15Z","oa":1},{"OA_place":"publisher","year":"2023","_id":"14539","page":"256","citation":{"chicago":"Zikelic, Dorde. “Automated Verification and Control of Infinite State Stochastic Systems.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/14539\">https://doi.org/10.15479/14539</a>.","mla":"Zikelic, Dorde. <i>Automated Verification and Control of Infinite State Stochastic Systems</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/14539\">10.15479/14539</a>.","ama":"Zikelic D. Automated verification and control of infinite state stochastic systems. 2023. doi:<a href=\"https://doi.org/10.15479/14539\">10.15479/14539</a>","ieee":"D. Zikelic, “Automated verification and control of infinite state stochastic systems,” Institute of Science and Technology Austria, 2023.","short":"D. Zikelic, Automated Verification and Control of Infinite State Stochastic Systems, Institute of Science and Technology Austria, 2023.","apa":"Zikelic, D. (2023). <i>Automated verification and control of infinite state stochastic systems</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/14539\">https://doi.org/10.15479/14539</a>","ista":"Zikelic D. 2023. Automated verification and control of infinite state stochastic systems. Institute of Science and Technology Austria."},"date_updated":"2026-04-07T13:27:56Z","month":"11","language":[{"iso":"eng"}],"corr_author":"1","publisher":"Institute of Science and Technology Austria","file":[{"success":1,"date_updated":"2023-11-15T13:43:28Z","access_level":"open_access","relation":"main_file","content_type":"application/pdf","creator":"cchlebak","file_id":"14540","file_size":2116426,"checksum":"f23e002b0059ca78e1fbb864da52dd7e","date_created":"2023-11-15T13:43:28Z","file_name":"main.pdf"},{"content_type":"application/x-zip-compressed","relation":"source_file","access_level":"closed","date_updated":"2023-11-15T13:44:24Z","file_name":"thesis_source.zip","date_created":"2023-11-15T13:44:24Z","file_size":35884057,"checksum":"80ca37618a3c7b59866875f8be9b15ed","file_id":"14541","creator":"cchlebak"}],"author":[{"last_name":"Zikelic","id":"294AA7A6-F248-11E8-B48F-1D18A9856A87","first_name":"Dorde","full_name":"Zikelic, Dorde","orcid":"0000-0002-4681-1699"}],"title":"Automated verification and control of infinite state stochastic systems","alternative_title":["ISTA Thesis"],"ec_funded":1,"type":"dissertation","date_published":"2023-11-15T00:00:00Z","ddc":["000"],"publication_identifier":{"isbn":["978-3-99078-036-7"],"issn":["2663-337X"]},"article_processing_charge":"No","oa":1,"file_date_updated":"2023-11-15T13:44:24Z","status":"public","publication_status":"published","project":[{"name":"Formal Methods for Stochastic Models: Algorithms and Applications","call_identifier":"H2020","grant_number":"863818","_id":"0599E47C-7A3F-11EA-A408-12923DDC885E"},{"name":"International IST Doctoral Program","call_identifier":"H2020","grant_number":"665385","_id":"2564DBCA-B435-11E9-9278-68D0E5697425"}],"day":"15","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","department":[{"_id":"KrCh"},{"_id":"GradSch"}],"doi":"10.15479/14539","oa_version":"Published Version","supervisor":[{"full_name":"Chatterjee, Krishnendu","first_name":"Krishnendu","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","last_name":"Chatterjee","orcid":"0000-0002-4561-241X"}],"abstract":[{"text":"Stochastic systems provide a formal framework for modelling and quantifying uncertainty in systems and have been widely adopted in many application domains. Formal\r\nverification and control of finite state stochastic systems, a subfield of formal methods\r\nalso known as probabilistic model checking, is well studied. In contrast, formal verification and control of infinite state stochastic systems have received comparatively\r\nless attention. However, infinite state stochastic systems commonly arise in practice.\r\nFor instance, probabilistic models that contain continuous probability distributions such\r\nas normal or uniform, or stochastic dynamical systems which are a classical model for\r\ncontrol under uncertainty, both give rise to infinite state systems.\r\nThe goal of this thesis is to contribute to laying theoretical and algorithmic foundations\r\nof fully automated formal verification and control of infinite state stochastic systems,\r\nwith a particular focus on systems that may be executed over a long or infinite time.\r\nWe consider formal verification of infinite state stochastic systems in the setting of\r\nstatic analysis of probabilistic programs and formal control in the setting of controller\r\nsynthesis in stochastic dynamical systems. For both problems, we present some of the\r\nfirst fully automated methods for probabilistic (a.k.a. quantitative) reachability and\r\nsafety analysis applicable to infinite time horizon systems. We also advance the state\r\nof the art of probability 1 (a.k.a. qualitative) reachability analysis for both problems.\r\nFinally, for formal controller synthesis in stochastic dynamical systems, we present a\r\nnovel framework for learning neural network control policies in stochastic dynamical\r\nsystems with formal guarantees on correctness with respect to quantitative reachability,\r\nsafety or reach-avoid specifications.\r\n","lang":"eng"}],"related_material":{"record":[{"status":"public","id":"10414","relation":"part_of_dissertation"},{"status":"public","relation":"part_of_dissertation","id":"12000"},{"id":"9644","relation":"part_of_dissertation","status":"public"},{"status":"public","id":"12511","relation":"part_of_dissertation"},{"id":"14600","relation":"part_of_dissertation","status":"public"},{"id":"14601","relation":"part_of_dissertation","status":"public"},{"relation":"part_of_dissertation","id":"1194","status":"public"}]},"date_created":"2023-11-15T13:39:10Z","tmp":{"name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)","image":"/images/cc_by_nc_sa.png","short":"CC BY-NC-SA (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode"},"degree_awarded":"PhD"},{"corr_author":"1","publisher":"Institute of Science and Technology Austria","language":[{"iso":"eng"}],"month":"11","page":"228","_id":"14587","citation":{"chicago":"Marveggio, Alice. “Weak-Strong Stability and Phase-Field Approximation of Interface Evolution Problems in Fluid Mechanics and in Material Sciences.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/at:ista:14587\">https://doi.org/10.15479/at:ista:14587</a>.","ieee":"A. Marveggio, “Weak-strong stability and phase-field approximation of interface evolution problems in fluid mechanics and in material sciences,” Institute of Science and Technology Austria, 2023.","ama":"Marveggio A. Weak-strong stability and phase-field approximation of interface evolution problems in fluid mechanics and in material sciences. 2023. doi:<a href=\"https://doi.org/10.15479/at:ista:14587\">10.15479/at:ista:14587</a>","mla":"Marveggio, Alice. <i>Weak-Strong Stability and Phase-Field Approximation of Interface Evolution Problems in Fluid Mechanics and in Material Sciences</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/at:ista:14587\">10.15479/at:ista:14587</a>.","ista":"Marveggio A. 2023. Weak-strong stability and phase-field approximation of interface evolution problems in fluid mechanics and in material sciences. Institute of Science and Technology Austria.","apa":"Marveggio, A. (2023). <i>Weak-strong stability and phase-field approximation of interface evolution problems in fluid mechanics and in material sciences</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:14587\">https://doi.org/10.15479/at:ista:14587</a>","short":"A. Marveggio, Weak-Strong Stability and Phase-Field Approximation of Interface Evolution Problems in Fluid Mechanics and in Material Sciences, Institute of Science and Technology Austria, 2023."},"date_updated":"2026-04-07T13:28:13Z","file":[{"relation":"main_file","content_type":"application/pdf","success":1,"access_level":"open_access","date_updated":"2023-11-29T09:09:31Z","date_created":"2023-11-29T09:09:31Z","file_size":2881100,"checksum":"6c7db4cc86da6cdc79f7f358dc7755d4","file_name":"thesis_Marveggio.pdf","creator":"amarvegg","file_id":"14626"},{"file_size":10189696,"checksum":"52f28bdf95ec82cff39f3685f9c48e7d","date_created":"2023-11-29T09:10:19Z","file_name":"Thesis_Marveggio.zip","creator":"amarvegg","file_id":"14627","relation":"source_file","content_type":"application/zip","date_updated":"2024-03-20T12:28:32Z","access_level":"closed"}],"acknowledgement":"The research projects contained in this thesis have received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (grant agreement No 948819).","OA_place":"publisher","year":"2023","ddc":["515"],"article_processing_charge":"No","publication_identifier":{"issn":["2663-337X"]},"ec_funded":1,"title":"Weak-strong stability and phase-field approximation of interface evolution problems in fluid mechanics and in material sciences","alternative_title":["ISTA Thesis"],"author":[{"id":"25647992-AA84-11E9-9D75-8427E6697425","first_name":"Alice","last_name":"Marveggio","full_name":"Marveggio, Alice"}],"date_published":"2023-11-21T00:00:00Z","has_accepted_license":"1","type":"dissertation","publication_status":"published","status":"public","doi":"10.15479/at:ista:14587","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","department":[{"_id":"GradSch"},{"_id":"JuFi"}],"project":[{"name":"Bridging Scales in Random Materials","call_identifier":"H2020","_id":"0aa76401-070f-11eb-9043-b5bb049fa26d","grant_number":"948819"}],"day":"21","oa":1,"file_date_updated":"2024-03-20T12:28:32Z","degree_awarded":"PhD","tmp":{"name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)","image":"/images/cc_by_nc_sa.png","short":"CC BY-NC-SA (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode"},"supervisor":[{"full_name":"Fischer, Julian L","last_name":"Fischer","id":"2C12A0B0-F248-11E8-B48F-1D18A9856A87","first_name":"Julian L","orcid":"0000-0002-0479-558X"}],"oa_version":"Published Version","date_created":"2023-11-21T11:41:05Z","related_material":{"record":[{"relation":"part_of_dissertation","id":"11842","status":"public"},{"status":"public","relation":"part_of_dissertation","id":"14597"}]},"abstract":[{"lang":"eng","text":"This thesis concerns the application of variational methods to the study of evolution problems arising in fluid mechanics and in material sciences. The main focus is on weak-strong stability properties of some curvature driven interface evolution problems, such as the two-phase Navier–Stokes flow with surface tension and multiphase mean curvature flow, and on the phase-field approximation of the latter. Furthermore, we discuss a variational approach to the study of a class of doubly nonlinear wave equations.\r\nFirst, we consider the two-phase Navier–Stokes flow with surface tension within a bounded domain. The two fluids are immiscible and separated by a sharp interface, which intersects the boundary of the domain at a constant contact angle of ninety degree. We devise a suitable concept of varifolds solutions for the associated interface evolution problem and we establish a weak-strong uniqueness principle in case of a two dimensional ambient space. In order to focus on the boundary effects and on the singular geometry of the evolving domains, we work for simplicity in the regime of same viscosities for the two fluids.\r\nThe core of the thesis consists in the rigorous proof of the convergence of the vectorial Allen-Cahn equation towards multiphase mean curvature flow for a suitable class of multi- well potentials and for well-prepared initial data. We even establish a rate of convergence. Our relative energy approach relies on the concept of gradient-flow calibration for branching singularities in multiphase mean curvature flow and thus enables us to overcome the limitations of other approaches. To the best of the author’s knowledge, our result is the first quantitative and unconditional one available in the literature for the vectorial/multiphase setting.\r\nThis thesis also contains a first study of weak-strong stability for planar multiphase mean curvature flow beyond the singularity resulting from a topology change. Previous weak-strong results are indeed limited to time horizons before the first topology change of the strong solution. We consider circular topology changes and we prove weak-strong stability for BV solutions to planar multiphase mean curvature flow beyond the associated singular times by dynamically adapting the strong solutions to the weak one by means of a space-time shift.\r\nIn the context of interface evolution problems, our proofs for the main results of this thesis are based on the relative energy technique, relying on novel suitable notions of relative energy functionals, which in particular measure the interface error. Our statements follow from the resulting stability estimates for the relative energy associated to the problem.\r\nAt last, we introduce a variational approach to the study of nonlinear evolution problems. This approach hinges on the minimization of a parameter dependent family of convex functionals over entire trajectories, known as Weighted Inertia-Dissipation-Energy (WIDE) functionals. We consider a class of doubly nonlinear wave equations and establish the convergence, up to subsequences, of the associated WIDE minimizers to a solution of the target problem as the parameter goes to zero."}]},{"degree_awarded":"PhD","abstract":[{"text":"For self-incompatibility (SI) to be stable in a population, theory predicts that sufficient inbreeding depression (ID) is required: the fitness of offspring from self-mated individuals must be low enough to prevent the spread of self-compatibility (SC). Reviews of natural plant populations have supported this theory, with SI species generally showing high levels of ID. However, there is thought to be an under-sampling of self-incompatible taxa in the current literature. In this thesis, I study inbreeding depression in the SI plant species Antirrhinum majus using both greenhouse crosses and a large collected field dataset. Additionally, the gametophytic S-locus of A. majus is highly heterozygous and polymorphic, thus making assembly and discovery of S-alleles very difficult. Here, 206 new alleles of the male component SLFs are presented, along with a phylogeny showing the high conservation with alleles from another Antirrhinum species. Lastly, selected sites within the protein structure of SLFs are investigated, with one site in particular highlighted as potentially being involved in the SI recognition mechanism.","lang":"eng"}],"related_material":{"record":[{"id":"11411","relation":"part_of_dissertation","status":"public"}]},"date_created":"2023-12-11T19:30:37Z","oa_version":"Published Version","supervisor":[{"full_name":"Barton, Nicholas H","id":"4880FE40-F248-11E8-B48F-1D18A9856A87","first_name":"Nicholas H","last_name":"Barton","orcid":"0000-0002-8548-5240"}],"project":[{"name":"International IST Doctoral Program","grant_number":"665385","_id":"2564DBCA-B435-11E9-9278-68D0E5697425","call_identifier":"H2020"}],"day":"12","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","department":[{"_id":"GradSch"},{"_id":"NiBa"}],"doi":"10.15479/at:ista:14651","acknowledged_ssus":[{"_id":"ScienComp"}],"status":"public","publication_status":"published","oa":1,"file_date_updated":"2023-12-14T08:58:18Z","publication_identifier":{"issn":["2663-337X"]},"article_processing_charge":"No","ddc":["570"],"has_accepted_license":"1","type":"dissertation","date_published":"2023-12-12T00:00:00Z","author":[{"orcid":"0000-0003-1771-714X","id":"2CFCFF98-F248-11E8-B48F-1D18A9856A87","first_name":"Louise S","last_name":"Arathoon","full_name":"Arathoon, Louise S"}],"title":"Investigating inbreeding depression and the self-incompatibility locus of Antirrhinum majus","alternative_title":["ISTA Thesis"],"ec_funded":1,"file":[{"file_id":"14684","creator":"larathoo","file_name":"Phd_Thesis_LA.pdf","file_size":34101468,"checksum":"520bdb61e95e66070e02824947d2c5fa","date_created":"2023-12-13T15:37:55Z","date_updated":"2023-12-13T15:37:55Z","access_level":"open_access","success":1,"content_type":"application/pdf","relation":"main_file"},{"file_name":"Phd_Thesis_LA.zip","date_created":"2023-12-13T15:42:23Z","file_size":31052872,"checksum":"d8e59afd0817c98fba2564a264508e5c","file_id":"14685","creator":"larathoo","content_type":"application/zip","relation":"source_file","date_updated":"2023-12-14T08:58:18Z","access_level":"closed"},{"relation":"supplementary_material","content_type":"application/zip","date_updated":"2023-12-14T08:58:18Z","access_level":"closed","date_created":"2023-12-11T19:24:59Z","checksum":"9a778c949932286f4519e1f1fca2820d","file_size":10713896,"file_name":"Supplementary_Materials.zip","creator":"larathoo","file_id":"14681"}],"page":"96","_id":"14651","citation":{"chicago":"Arathoon, Louise S. “Investigating Inbreeding Depression and the Self-Incompatibility Locus of Antirrhinum Majus.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/at:ista:14651\">https://doi.org/10.15479/at:ista:14651</a>.","ama":"Arathoon LS. Investigating inbreeding depression and the self-incompatibility locus of Antirrhinum majus. 2023. doi:<a href=\"https://doi.org/10.15479/at:ista:14651\">10.15479/at:ista:14651</a>","mla":"Arathoon, Louise S. <i>Investigating Inbreeding Depression and the Self-Incompatibility Locus of Antirrhinum Majus</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/at:ista:14651\">10.15479/at:ista:14651</a>.","ieee":"L. S. Arathoon, “Investigating inbreeding depression and the self-incompatibility locus of Antirrhinum majus,” Institute of Science and Technology Austria, 2023.","apa":"Arathoon, L. S. (2023). <i>Investigating inbreeding depression and the self-incompatibility locus of Antirrhinum majus</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:14651\">https://doi.org/10.15479/at:ista:14651</a>","short":"L.S. Arathoon, Investigating Inbreeding Depression and the Self-Incompatibility Locus of Antirrhinum Majus, Institute of Science and Technology Austria, 2023.","ista":"Arathoon LS. 2023. Investigating inbreeding depression and the self-incompatibility locus of Antirrhinum majus. Institute of Science and Technology Austria."},"date_updated":"2026-04-07T13:28:30Z","month":"12","language":[{"iso":"eng"}],"publisher":"Institute of Science and Technology Austria","corr_author":"1","year":"2023","OA_place":"publisher"},{"type":"dissertation","has_accepted_license":"1","date_published":"2023-03-23T00:00:00Z","alternative_title":["ISTA Thesis"],"title":"Synchronization in collectively moving active matter","author":[{"full_name":"Riedl, Michael","last_name":"Riedl","first_name":"Michael","id":"3BE60946-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-4844-6311"}],"publication_identifier":{"issn":["2663-337X"]},"article_processing_charge":"No","ddc":["530"],"year":"2023","OA_place":"publisher","file":[{"access_level":"closed","date_updated":"2023-11-24T11:57:46Z","description":"the main file is missing the bibliography. See new thesis record 14530 for updated files.","content_type":"application/pdf","relation":"main_file","file_id":"12745","creator":"cchlebak","file_name":"Thesis_Riedl_2023.pdf","date_created":"2023-03-23T12:49:23Z","file_size":63734746,"checksum":"eba0e19fe57a8c15e7aeab55a845efb7"},{"embargo_to":"open_access","content_type":"application/octet-stream","relation":"source_file","date_updated":"2023-09-24T22:30:03Z","access_level":"closed","file_name":"Thesis_Riedl_2023_source.rar","date_created":"2023-03-23T12:54:34Z","file_size":339473651,"checksum":"0eb7b650cc8ae843bcec7c8a6109ae03","file_id":"12746","creator":"cchlebak"}],"month":"03","citation":{"ama":"Riedl M. Synchronization in collectively moving active matter. 2023. doi:<a href=\"https://doi.org/10.15479/at:ista:12726\">10.15479/at:ista:12726</a>","mla":"Riedl, Michael. <i>Synchronization in Collectively Moving Active Matter</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/at:ista:12726\">10.15479/at:ista:12726</a>.","ieee":"M. Riedl, “Synchronization in collectively moving active matter,” Institute of Science and Technology Austria, 2023.","short":"M. Riedl, Synchronization in Collectively Moving Active Matter, Institute of Science and Technology Austria, 2023.","apa":"Riedl, M. (2023). <i>Synchronization in collectively moving active matter</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:12726\">https://doi.org/10.15479/at:ista:12726</a>","ista":"Riedl M. 2023. Synchronization in collectively moving active matter. Institute of Science and Technology Austria.","chicago":"Riedl, Michael. “Synchronization in Collectively Moving Active Matter.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/at:ista:12726\">https://doi.org/10.15479/at:ista:12726</a>."},"_id":"12726","date_updated":"2026-04-07T13:29:13Z","page":"260","publisher":"Institute of Science and Technology Austria","corr_author":"1","language":[{"iso":"eng"}],"related_material":{"record":[{"status":"public","relation":"part_of_dissertation","id":"461"},{"status":"public","relation":"part_of_dissertation","id":"10791"},{"status":"public","id":"7932","relation":"part_of_dissertation"},{"relation":"part_of_dissertation","id":"10703","status":"public"},{"status":"public","relation":"new_edition","id":"14530"}]},"abstract":[{"text":"Most motions of many-body systems at any scale in nature with sufficient degrees\r\nof freedom tend to be chaotic; reaching from the orbital motion of planets, the air\r\ncurrents in our atmosphere, down to the water flowing through our pipelines or\r\nthe movement of a population of bacteria. To the observer it is therefore intriguing\r\nwhen a moving collective exhibits order. Collective motion of flocks of birds, schools\r\nof fish or swarms of self-propelled particles or robots have been studied extensively\r\nover the past decades but the mechanisms involved in the transition from chaos to\r\norder remain unclear. Here, the interactions, that in most systems give rise to chaos,\r\nsustain order. In this thesis we investigate mechanisms that preserve, destabilize\r\nor lead to the ordered state. We show that endothelial cells migrating in circular\r\nconfinements transition to a collective rotating state and concomitantly synchronize\r\nthe frequencies of nucleating actin waves within individual cells. Consequently,\r\nthe frequency dependent cell migration speed uniformizes across the population.\r\nComplementary to the WAVE dependent nucleation of traveling actin waves, we\r\nshow that in leukocytes the actin polymerization depending on WASp generates\r\npushing forces locally at stationary patches. Next, in pipe flows, we study methods\r\nto disrupt the self–sustaining cycle of turbulence and therefore relaminarize the\r\nflow. While we find in pulsating flow conditions that turbulence emerges through a\r\nhelical instability during the decelerating phase. Finally, we show quantitatively in\r\nbrain slices of mice that wild-type control neurons can compensate the migratory\r\ndeficits of a genetically modified neuronal sub–population in the developing cortex.","lang":"eng"}],"date_created":"2023-03-15T13:22:13Z","supervisor":[{"full_name":"Hof, Björn","first_name":"Björn","id":"3A374330-F248-11E8-B48F-1D18A9856A87","last_name":"Hof","orcid":"0000-0003-2057-2754"}],"oa_version":"None","degree_awarded":"PhD","file_date_updated":"2023-11-24T11:57:46Z","day":"23","acknowledged_ssus":[{"_id":"M-Shop"},{"_id":"Bio"}],"doi":"10.15479/at:ista:12726","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","department":[{"_id":"GradSch"},{"_id":"BjHo"}],"status":"public","publication_status":"published"},{"status":"public","publication_status":"published","day":"16","department":[{"_id":"GradSch"},{"_id":"MiSi"}],"user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","doi":"10.15479/14530","acknowledged_ssus":[{"_id":"M-Shop"},{"_id":"Bio"}],"oa":1,"file_date_updated":"2023-11-15T09:52:54Z","keyword":["Synchronization","Collective Movement","Active Matter","Cell Migration","Active Colloids"],"degree_awarded":"PhD","oa_version":"Updated Version","supervisor":[{"id":"3A374330-F248-11E8-B48F-1D18A9856A87","first_name":"Björn","last_name":"Hof","full_name":"Hof, Björn","orcid":"0000-0003-2057-2754"}],"abstract":[{"lang":"eng","text":"Most motions of many-body systems at any scale in nature with sufficient degrees of freedom tend to be chaotic; reaching from the orbital motion of planets, the air currents in our atmosphere, down to the water flowing through our pipelines or the movement of a population of bacteria. To the observer it is therefore intriguing when a moving collective exhibits order. Collective motion of flocks of birds, schools of fish or swarms of self-propelled particles or robots have been studied extensively over the past decades but the mechanisms involved in the transition from chaos to order remain unclear. Here, the interactions, that in most systems give rise to chaos, sustain order.  In this thesis we investigate mechanisms that preserve, destabilize or lead to the ordered state. We show that endothelial cells migrating in circular confinements transition to a collective rotating state and concomitantly synchronize the frequencies of nucleating actin waves within individual cells. Consequently, the frequency dependent cell migration speed uniformizes across the population. Complementary to the WAVE dependent nucleation of traveling actin waves, we show that in leukocytes the actin polymerization depending on WASp generates pushing forces locally at stationary patches. Next, in pipe flows, we study methods to disrupt the self--sustaining cycle of turbulence and therefore relaminarize the flow. While we find in pulsating flow conditions that turbulence emerges through a helical instability during the decelerating phase. Finally, we show quantitatively in brain slices of mice that wild-type control neurons can compensate the migratory deficits of a genetically modified neuronal sub--population in the developing cortex.  "}],"related_material":{"record":[{"relation":"part_of_dissertation","id":"461","status":"public"},{"status":"public","id":"10791","relation":"part_of_dissertation"},{"status":"public","id":"7932","relation":"part_of_dissertation"},{"status":"public","id":"10703","relation":"part_of_dissertation"},{"status":"public","relation":"old_edition","id":"12726"}]},"date_created":"2023-11-15T09:59:03Z","_id":"14530","date_updated":"2026-04-07T13:29:13Z","page":"260","citation":{"chicago":"Riedl, Michael. “Synchronization in Collectively Moving Active Matter.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/14530\">https://doi.org/10.15479/14530</a>.","mla":"Riedl, Michael. <i>Synchronization in Collectively Moving Active Matter</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/14530\">10.15479/14530</a>.","ama":"Riedl M. Synchronization in collectively moving active matter. 2023. doi:<a href=\"https://doi.org/10.15479/14530\">10.15479/14530</a>","ieee":"M. Riedl, “Synchronization in collectively moving active matter,” Institute of Science and Technology Austria, 2023.","apa":"Riedl, M. (2023). <i>Synchronization in collectively moving active matter</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/14530\">https://doi.org/10.15479/14530</a>","short":"M. Riedl, Synchronization in Collectively Moving Active Matter, Institute of Science and Technology Austria, 2023.","ista":"Riedl M. 2023. Synchronization in collectively moving active matter. Institute of Science and Technology Austria."},"month":"11","language":[{"iso":"eng"}],"publisher":"Institute of Science and Technology Austria","corr_author":"1","file":[{"file_name":"Thesis_Riedl_2023_corr.pdf","checksum":"52e1d0ab6c1abe59c82dfe8c9ff5f83a","file_size":36743942,"date_created":"2023-11-15T09:52:54Z","file_id":"14536","creator":"mriedl","content_type":"application/pdf","relation":"main_file","access_level":"open_access","date_updated":"2023-11-15T09:52:54Z","success":1}],"OA_place":"publisher","year":"2023","ddc":["530","570"],"publication_identifier":{"issn":["2663-337X"]},"article_processing_charge":"No","author":[{"orcid":"0000-0003-4844-6311","full_name":"Riedl, Michael","last_name":"Riedl","id":"3BE60946-F248-11E8-B48F-1D18A9856A87","first_name":"Michael"}],"title":"Synchronization in collectively moving active matter","alternative_title":["ISTA Thesis"],"has_accepted_license":"1","type":"dissertation","date_published":"2023-11-16T00:00:00Z"},{"oa_version":"Published Version","supervisor":[{"full_name":"Wagner, Uli","last_name":"Wagner","id":"36690CA2-F248-11E8-B48F-1D18A9856A87","first_name":"Uli","orcid":"0000-0002-1494-0568"}],"abstract":[{"text":"The extension of extremal combinatorics to the setting of exterior algebra is a work\r\nin progress that gained attention recently. In this thesis, we study the combinatorial structure of exterior algebra by introducing a dictionary that translates the notions from the set systems into the framework of exterior algebra. We show both generalizations of celebrated Erdös--Ko--Rado theorem and Hilton--Milner theorem to the setting of exterior algebra in the simplest non-trivial case of two-forms.\r\n","lang":"eng"}],"related_material":{"record":[{"relation":"part_of_dissertation","id":"12680","status":"public"}]},"date_created":"2023-07-31T10:20:55Z","degree_awarded":"MS","file_date_updated":"2023-08-03T15:28:55Z","oa":1,"status":"public","publication_status":"published","day":"31","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","department":[{"_id":"GradSch"},{"_id":"UlWa"}],"doi":"10.15479/at:ista:13331","author":[{"last_name":"Köse","first_name":"Seyda","id":"8ba3170d-dc85-11ea-9058-c4251c96a6eb","full_name":"Köse, Seyda","orcid":"0009-0008-0457-9730"}],"title":"Exterior algebra and combinatorics","alternative_title":["ISTA Master's Thesis"],"has_accepted_license":"1","type":"dissertation","date_published":"2023-07-31T00:00:00Z","ddc":["510","516"],"publication_identifier":{"issn":["2791-4585"]},"article_processing_charge":"No","OA_place":"publisher","year":"2023","_id":"13331","date_updated":"2026-04-07T13:29:29Z","page":"26","citation":{"mla":"Köse, Seyda. <i>Exterior Algebra and Combinatorics</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/at:ista:13331\">10.15479/at:ista:13331</a>.","ama":"Köse S. Exterior algebra and combinatorics. 2023. doi:<a href=\"https://doi.org/10.15479/at:ista:13331\">10.15479/at:ista:13331</a>","ieee":"S. Köse, “Exterior algebra and combinatorics,” Institute of Science and Technology Austria, 2023.","apa":"Köse, S. (2023). <i>Exterior algebra and combinatorics</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:13331\">https://doi.org/10.15479/at:ista:13331</a>","short":"S. Köse, Exterior Algebra and Combinatorics, Institute of Science and Technology Austria, 2023.","ista":"Köse S. 2023. Exterior algebra and combinatorics. Institute of Science and Technology Austria.","chicago":"Köse, Seyda. “Exterior Algebra and Combinatorics.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/at:ista:13331\">https://doi.org/10.15479/at:ista:13331</a>."},"month":"07","language":[{"iso":"eng"}],"publisher":"Institute of Science and Technology Austria","corr_author":"1","file":[{"checksum":"96ee518d796d02af71395622c45de03c","file_size":28684,"date_created":"2023-07-31T10:16:32Z","file_name":"Exterior Algebra and Combinatorics.zip","creator":"skoese","file_id":"13333","relation":"source_file","content_type":"application/x-zip-compressed","date_updated":"2023-07-31T10:16:32Z","access_level":"closed"},{"relation":"main_file","content_type":"application/pdf","success":1,"date_updated":"2023-08-03T15:28:55Z","access_level":"open_access","date_created":"2023-08-03T15:28:55Z","checksum":"f610f4713f88bc477de576aaa46b114e","file_size":4953418,"file_name":"thesis-pdfa.pdf","creator":"skoese","file_id":"13480"}]},{"status":"public","publication_status":"published","day":"01","doi":"10.1016/j.disc.2023.113363","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","department":[{"_id":"UlWa"},{"_id":"GradSch"}],"issue":"6","oa":1,"main_file_link":[{"url":" https://doi.org/10.48550/arXiv.2201.10892","open_access":"1"}],"external_id":{"arxiv":["2201.10892"],"isi":["001189844500001"]},"scopus_import":"1","intvolume":"       346","oa_version":"Preprint","article_number":"113363","related_material":{"record":[{"status":"public","relation":"dissertation_contains","id":"13331"}]},"abstract":[{"lang":"eng","text":"The celebrated Erdős–Ko–Rado theorem about the maximal size of an intersecting family of r-element subsets of  was extended to the setting of exterior algebra in [5, Theorem 2.3] and in [6, Theorem 1.4]. However, the equality case has not been settled yet. In this short note, we show that the extension of the Erdős–Ko–Rado theorem and the characterization of the equality case therein, as well as those of the Hilton–Milner theorem to the setting of exterior algebra in the simplest non-trivial case of two-forms follow from a folklore puzzle about possible arrangements of an intersecting family of lines."}],"volume":346,"date_created":"2023-02-26T23:01:00Z","article_type":"letter_note","month":"06","_id":"12680","date_updated":"2026-04-07T13:29:28Z","citation":{"ieee":"G. Ivanov and S. Köse, “Erdős-Ko-Rado and Hilton-Milner theorems for two-forms,” <i>Discrete Mathematics</i>, vol. 346, no. 6. Elsevier, 2023.","mla":"Ivanov, Grigory, and Seyda Köse. “Erdős-Ko-Rado and Hilton-Milner Theorems for Two-Forms.” <i>Discrete Mathematics</i>, vol. 346, no. 6, 113363, Elsevier, 2023, doi:<a href=\"https://doi.org/10.1016/j.disc.2023.113363\">10.1016/j.disc.2023.113363</a>.","ama":"Ivanov G, Köse S. Erdős-Ko-Rado and Hilton-Milner theorems for two-forms. <i>Discrete Mathematics</i>. 2023;346(6). doi:<a href=\"https://doi.org/10.1016/j.disc.2023.113363\">10.1016/j.disc.2023.113363</a>","ista":"Ivanov G, Köse S. 2023. Erdős-Ko-Rado and Hilton-Milner theorems for two-forms. Discrete Mathematics. 346(6), 113363.","short":"G. Ivanov, S. Köse, Discrete Mathematics 346 (2023).","apa":"Ivanov, G., &#38; Köse, S. (2023). Erdős-Ko-Rado and Hilton-Milner theorems for two-forms. <i>Discrete Mathematics</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.disc.2023.113363\">https://doi.org/10.1016/j.disc.2023.113363</a>","chicago":"Ivanov, Grigory, and Seyda Köse. “Erdős-Ko-Rado and Hilton-Milner Theorems for Two-Forms.” <i>Discrete Mathematics</i>. Elsevier, 2023. <a href=\"https://doi.org/10.1016/j.disc.2023.113363\">https://doi.org/10.1016/j.disc.2023.113363</a>."},"corr_author":"1","publisher":"Elsevier","language":[{"iso":"eng"}],"year":"2023","publication":"Discrete Mathematics","publication_identifier":{"issn":["0012-365X"]},"quality_controlled":"1","article_processing_charge":"No","title":"Erdős-Ko-Rado and Hilton-Milner theorems for two-forms","author":[{"full_name":"Ivanov, Grigory","first_name":"Grigory","id":"87744F66-5C6F-11EA-AFE0-D16B3DDC885E","last_name":"Ivanov","orcid":"0000-0002-5021-3982"},{"orcid":"0009-0008-0457-9730","full_name":"Köse, Seyda","id":"8ba3170d-dc85-11ea-9058-c4251c96a6eb","first_name":"Seyda","last_name":"Köse"}],"isi":1,"arxiv":1,"type":"journal_article","date_published":"2023-06-01T00:00:00Z"},{"external_id":{"arxiv":["2207.14200"]},"oa_version":"Published Version","date_created":"2023-05-23T11:36:18Z","related_material":{"link":[{"url":"https://github.com/IST-DASLab/CrAM","relation":"software"}],"record":[{"relation":"dissertation_contains","id":"13074","status":"public"}]},"abstract":[{"text":"Deep neural networks (DNNs) often have to be compressed, via pruning and/or quantization, before they can be deployed in practical settings. In this work we propose a new compression-aware minimizer dubbed CrAM that modifies the optimization step in a principled way, in order to produce models whose local loss behavior is stable under compression operations such as pruning. Thus, dense models trained via CrAM should be compressible post-training, in a single step, without significant accuracy loss. Experimental results on standard benchmarks, such as residual networks for ImageNet classification and BERT models for language modelling, show that CrAM produces dense models that can be more accurate than the standard SGD/Adam-based baselines, but which are stable under weight pruning: specifically, we can prune models in one-shot to 70-80% sparsity with almost no accuracy loss, and to 90% with reasonable (∼1%) accuracy loss, which is competitive with gradual compression methods. Additionally, CrAM can produce sparse models which perform well for transfer learning, and it also works for semi-structured 2:4 pruning patterns supported by GPU hardware. The code for reproducing the results is available at this https URL .","lang":"eng"}],"publication_status":"published","status":"public","acknowledged_ssus":[{"_id":"ScienComp"}],"department":[{"_id":"GradSch"},{"_id":"DaAl"},{"_id":"ChLa"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","day":"01","project":[{"name":"Elastic Coordination for Scalable Machine Learning","_id":"268A44D6-B435-11E9-9278-68D0E5697425","grant_number":"805223","call_identifier":"H2020"}],"file_date_updated":"2024-07-22T09:09:45Z","main_file_link":[{"open_access":"1","url":"https://openreview.net/pdf?id=_eTZBs-yedr"}],"oa":1,"publication":"11th International Conference on Learning Representations ","ddc":["000"],"article_processing_charge":"No","quality_controlled":"1","arxiv":1,"ec_funded":1,"title":"CrAM: A Compression-Aware Minimizer","author":[{"first_name":"Elena-Alexandra","id":"32D78294-F248-11E8-B48F-1D18A9856A87","last_name":"Peste","full_name":"Peste, Elena-Alexandra"},{"full_name":"Vladu, Adrian","last_name":"Vladu","first_name":"Adrian"},{"last_name":"Kurtic","id":"47beb3a5-07b5-11eb-9b87-b108ec578218","first_name":"Eldar","full_name":"Kurtic, Eldar"},{"id":"40C20FD2-F248-11E8-B48F-1D18A9856A87","first_name":"Christoph","last_name":"Lampert","full_name":"Lampert, Christoph","orcid":"0000-0001-8622-7887"},{"id":"4A899BFC-F248-11E8-B48F-1D18A9856A87","first_name":"Dan-Adrian","last_name":"Alistarh","full_name":"Alistarh, Dan-Adrian","orcid":"0000-0003-3650-940X"}],"date_published":"2023-05-01T00:00:00Z","type":"conference","has_accepted_license":"1","publisher":"OpenReview","corr_author":"1","language":[{"iso":"eng"}],"month":"05","date_updated":"2026-04-07T13:30:19Z","_id":"13053","citation":{"short":"A. Krumes, A. Vladu, E. Kurtic, C. Lampert, D.-A. Alistarh, in:, 11th International Conference on Learning Representations , OpenReview, 2023.","apa":"Krumes, A., Vladu, A., Kurtic, E., Lampert, C., &#38; Alistarh, D.-A. (2023). CrAM: A Compression-Aware Minimizer. In <i>11th International Conference on Learning Representations </i>. Kigali, Rwanda : OpenReview.","ista":"Krumes A, Vladu A, Kurtic E, Lampert C, Alistarh D-A. 2023. CrAM: A Compression-Aware Minimizer. 11th International Conference on Learning Representations . ICLR: International Conference on Learning Representations.","ama":"Krumes A, Vladu A, Kurtic E, Lampert C, Alistarh D-A. CrAM: A Compression-Aware Minimizer. In: <i>11th International Conference on Learning Representations </i>. OpenReview; 2023.","mla":"Krumes, Alexandra, et al. “CrAM: A Compression-Aware Minimizer.” <i>11th International Conference on Learning Representations </i>, OpenReview, 2023.","ieee":"A. Krumes, A. Vladu, E. Kurtic, C. Lampert, and D.-A. Alistarh, “CrAM: A Compression-Aware Minimizer,” in <i>11th International Conference on Learning Representations </i>, Kigali, Rwanda , 2023.","chicago":"Krumes, Alexandra, Adrian Vladu, Eldar Kurtic, Christoph Lampert, and Dan-Adrian Alistarh. “CrAM: A Compression-Aware Minimizer.” In <i>11th International Conference on Learning Representations </i>. OpenReview, 2023."},"file":[{"relation":"main_file","content_type":"application/pdf","success":1,"date_updated":"2024-07-22T09:09:45Z","access_level":"open_access","checksum":"a6eec897e13a91cdc3eeaf309801752c","file_size":458201,"date_created":"2024-07-22T09:09:45Z","file_name":"2023_ICLR_Peste.pdf","creator":"dernst","file_id":"17294"}],"acknowledgement":"AP, EK, DA received funding from the European Research Council (ERC) under the European\r\nUnion’s Horizon 2020 research and innovation programme (grant agreement No 805223 ScaleML). AV acknowledges the support of the French Agence Nationale de la Recherche (ANR), under grant ANR-21-CE48-0016 (project COMCOPT). We further acknowledge the support from the Scientific Service Units (SSU) of ISTA through resources provided by Scientific Computing (SciComp).","conference":{"end_date":"2023-05-05","start_date":"2023-05-01","location":"Kigali, Rwanda ","name":"ICLR: International Conference on Learning Representations"},"year":"2023"},{"citation":{"chicago":"Hennessey-Wesen, Mike. “Adaptive Mutation in E. Coli Modulated by LuxS.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/at:ista:14641\">https://doi.org/10.15479/at:ista:14641</a>.","ama":"Hennessey-Wesen M. Adaptive mutation in E. coli modulated by luxS. 2023. doi:<a href=\"https://doi.org/10.15479/at:ista:14641\">10.15479/at:ista:14641</a>","mla":"Hennessey-Wesen, Mike. <i>Adaptive Mutation in E. Coli Modulated by LuxS</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/at:ista:14641\">10.15479/at:ista:14641</a>.","ieee":"M. Hennessey-Wesen, “Adaptive mutation in E. coli modulated by luxS,” Institute of Science and Technology Austria, 2023.","short":"M. Hennessey-Wesen, Adaptive Mutation in E. Coli Modulated by LuxS, Institute of Science and Technology Austria, 2023.","apa":"Hennessey-Wesen, M. (2023). <i>Adaptive mutation in E. coli modulated by luxS</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:14641\">https://doi.org/10.15479/at:ista:14641</a>","ista":"Hennessey-Wesen M. 2023. Adaptive mutation in E. coli modulated by luxS. Institute of Science and Technology Austria."},"_id":"14641","date_updated":"2026-04-07T13:29:59Z","page":"104","month":"11","language":[{"iso":"eng"}],"corr_author":"1","publisher":"Institute of Science and Technology Austria","file":[{"date_updated":"2024-11-30T23:30:05Z","access_level":"closed","embargo_to":"open_access","content_type":"application/vnd.oasis.opendocument.text","relation":"source_file","file_id":"14648","creator":"mhenness","file_name":"mike_thesis_v06-12-2023.odt","date_created":"2023-12-06T13:13:26Z","file_size":46405919,"checksum":"4127c285b34f4bf7fb31ef24f9d14c25"},{"embargo":"2026-07-18","date_updated":"2025-07-17T11:20:25Z","access_level":"closed","relation":"main_file","embargo_to":"open_access","content_type":"application/pdf","creator":"mhenness","file_id":"14649","date_created":"2023-12-06T13:14:15Z","checksum":"f5203a61eddaf35235bbc51904d73982","file_size":21282155,"file_name":"mike_thesis_v06-12-2023.pdf"},{"title":"Print version","file_id":"19720","creator":"cchlebak","file_name":"2023_Hennessey_Michael_Thesis_print.pdf","checksum":"902102d26d30e74dbd6cdd70a65820c3","file_size":45847968,"date_created":"2025-05-20T12:59:12Z","access_level":"closed","date_updated":"2025-05-20T22:31:34Z","content_type":"application/pdf","embargo_to":"open_access","description":"for printing purposes only","relation":"other"}],"OA_place":"publisher","year":"2023","ddc":["570"],"publication_identifier":{"issn":["2663-337X"]},"article_processing_charge":"No","author":[{"full_name":"Hennessey-Wesen, Mike","first_name":"Mike","id":"3F338C72-F248-11E8-B48F-1D18A9856A87","last_name":"Hennessey-Wesen"}],"alternative_title":["ISTA Thesis"],"title":"Adaptive mutation in E. coli modulated by luxS","ec_funded":1,"has_accepted_license":"1","type":"dissertation","date_published":"2023-11-30T00:00:00Z","status":"public","publication_status":"published","day":"30","project":[{"name":"International IST Doctoral Program","_id":"2564DBCA-B435-11E9-9278-68D0E5697425","grant_number":"665385","call_identifier":"H2020"}],"user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","department":[{"_id":"GradSch"},{"_id":"BjHo"}],"doi":"10.15479/at:ista:14641","acknowledged_ssus":[{"_id":"LifeSc"},{"_id":"Bio"},{"_id":"CampIT"}],"file_date_updated":"2025-07-17T11:20:25Z","keyword":["microfluidics","miceobiology","mutations","quorum sensing"],"degree_awarded":"PhD","oa_version":"Published Version","supervisor":[{"orcid":"0000-0003-2057-2754","full_name":"Hof, Björn","last_name":"Hof","first_name":"Björn","id":"3A374330-F248-11E8-B48F-1D18A9856A87"}],"abstract":[{"text":"Mutation rates represent the net result of complex interactions among various\r\ncellular processes and can dramatically influence the evolutionary fate of\r\nmicrobial populations. However, many popular techniques used to study\r\nmutations are subject to the confounding effects of heredity and the subtleties\r\nof adaptation to selection, all of which make it difficult to observe any dynamic\r\nresponses of mutation rates to fitness challenges. Furthermore, in spite of the\r\nubiquity of quorum sensing systems across the bacterial domain and relevance\r\nfor many physiological behaviors, the effects of such mechanisms on mutation\r\nrate and adaptation remain poorly understood. In the following work, I\r\npresent the development of a microfluidic droplet-based method to measure\r\nsingle base-pair mutation rates in growing populations of the bacterium\r\nEscherichia coli. I use this method to observe a stress-induced increase in\r\nmutation rate that is mediated by luxS, a highly conserved bacterial quorum\r\nsensing component. I also show that the aforementioned increase in mutation\r\nrate, and its associated control by luxS, corresponds to a higher degree of\r\nadaptability under competitive environments.","lang":"eng"}],"date_created":"2023-12-04T13:17:37Z"},{"status":"public","publication_status":"published","project":[{"name":"International IST Doctoral Program","call_identifier":"H2020","grant_number":"665385","_id":"2564DBCA-B435-11E9-9278-68D0E5697425"}],"day":"10","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","department":[{"_id":"GradSch"},{"_id":"KrPi"}],"doi":"10.15479/14506","file_date_updated":"2023-11-23T10:30:08Z","oa":1,"degree_awarded":"PhD","oa_version":"Published Version","supervisor":[{"orcid":"0000-0002-9139-1654","full_name":"Pietrzak, Krzysztof Z","last_name":"Pietrzak","first_name":"Krzysztof Z","id":"3E04A7AA-F248-11E8-B48F-1D18A9856A87"}],"abstract":[{"text":"Payment channel networks are a promising approach to improve the scalability bottleneck\r\nof cryptocurrencies. Two design principles behind payment channel networks are\r\nefficiency and privacy. Payment channel networks improve efficiency by allowing users\r\nto transact in a peer-to-peer fashion along multi-hop routes in the network, avoiding\r\nthe lengthy process of consensus on the blockchain. Transacting over payment channel\r\nnetworks also improves privacy as these transactions are not broadcast to the blockchain.\r\nDespite the influx of recent protocols built on top of payment channel networks and\r\ntheir analysis, a common shortcoming of many of these protocols is that they typically\r\nfocus only on either improving efficiency or privacy, but not both. Another limitation\r\non the efficiency front is that the models used to model actions, costs and utilities of\r\nusers are limited or come with unrealistic assumptions.\r\nThis thesis aims to address some of the shortcomings of recent protocols and algorithms\r\non payment channel networks, particularly in their privacy and efficiency aspects. We\r\nfirst present a payment route discovery protocol based on hub labelling and private\r\ninformation retrieval that hides the route query and is also efficient. We then present\r\na rebalancing protocol that formulates the rebalancing problem as a linear program\r\nand solves the linear program using multiparty computation so as to hide the channel\r\nbalances. The rebalancing solution as output by our protocol is also globally optimal.\r\nWe go on to develop more realistic models of the action space, costs, and utilities of\r\nboth existing and new users that want to join the network. In each of these settings,\r\nwe also develop algorithms to optimise the utility of these users with good guarantees\r\non the approximation and competitive ratios.","lang":"eng"}],"related_material":{"record":[{"relation":"part_of_dissertation","id":"13238","status":"deleted"},{"relation":"part_of_dissertation","id":"9969","status":"public"},{"relation":"part_of_dissertation","id":"14490","status":"public"}]},"date_created":"2023-11-10T08:10:43Z","page":"162","_id":"14506","date_updated":"2026-04-07T13:29:45Z","citation":{"ieee":"M. X. Yeo, “Advances in efficiency and privacy in payment channel network analysis,” Institute of Science and Technology Austria, 2023.","mla":"Yeo, Michelle X. <i>Advances in Efficiency and Privacy in Payment Channel Network Analysis</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/14506\">10.15479/14506</a>.","ama":"Yeo MX. Advances in efficiency and privacy in payment channel network analysis. 2023. doi:<a href=\"https://doi.org/10.15479/14506\">10.15479/14506</a>","ista":"Yeo MX. 2023. Advances in efficiency and privacy in payment channel network analysis. Institute of Science and Technology Austria.","apa":"Yeo, M. X. (2023). <i>Advances in efficiency and privacy in payment channel network analysis</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/14506\">https://doi.org/10.15479/14506</a>","short":"M.X. Yeo, Advances in Efficiency and Privacy in Payment Channel Network Analysis, Institute of Science and Technology Austria, 2023.","chicago":"Yeo, Michelle X. “Advances in Efficiency and Privacy in Payment Channel Network Analysis.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/14506\">https://doi.org/10.15479/14506</a>."},"month":"11","language":[{"iso":"eng"}],"corr_author":"1","publisher":"Institute of Science and Technology Austria","file":[{"access_level":"closed","date_updated":"2023-11-23T10:29:55Z","content_type":"application/x-zip-compressed","relation":"source_file","file_id":"14598","creator":"cchlebak","file_name":"thesis_yeo.zip","date_created":"2023-11-23T10:29:55Z","checksum":"521c72818d720a52b377207b2ee87b6a","file_size":3037720},{"relation":"main_file","content_type":"application/pdf","success":1,"access_level":"open_access","date_updated":"2023-11-23T10:30:08Z","file_size":2717256,"checksum":"0ed5d16899687aecf13d843c9878c9f2","date_created":"2023-11-23T10:30:08Z","file_name":"thesis_yeo.pdf","creator":"cchlebak","file_id":"14599"}],"OA_place":"publisher","year":"2023","ddc":["000"],"publication_identifier":{"issn":["2663-337X"]},"article_processing_charge":"No","author":[{"full_name":"Yeo, Michelle X","first_name":"Michelle X","id":"2D82B818-F248-11E8-B48F-1D18A9856A87","last_name":"Yeo","orcid":"0009-0001-3676-4809"}],"title":"Advances in efficiency and privacy in payment channel network analysis","alternative_title":["ISTA Thesis"],"ec_funded":1,"has_accepted_license":"1","type":"dissertation","date_published":"2023-11-10T00:00:00Z"},{"acknowledgement":"The work was partially supported by the Austrian Science Fund (FWF) through the project CoRaF (grant 2020388). It was also partially supported by NCN Grant 2019/35/B/ST6/04138 and ERC Grant 885666.","conference":{"name":"ICDCS: International Conference on Distributed Computing Systems","location":"Hong Kong, China","start_date":"2023-07-18","end_date":"2023-07-21"},"year":"2023","month":"10","_id":"14490","page":"603-613","citation":{"ista":"Avarikioti Z, Lizurej T, Michalak T, Yeo MX. 2023. Lightning creation games. 43rd International Conference on Distributed Computing Systems. ICDCS: International Conference on Distributed Computing Systems vol. 2023, 603–613.","short":"Z. Avarikioti, T. Lizurej, T. Michalak, M.X. Yeo, in:, 43rd International Conference on Distributed Computing Systems, IEEE, 2023, pp. 603–613.","apa":"Avarikioti, Z., Lizurej, T., Michalak, T., &#38; Yeo, M. X. (2023). Lightning creation games. In <i>43rd International Conference on Distributed Computing Systems</i> (Vol. 2023, pp. 603–613). Hong Kong, China: IEEE. <a href=\"https://doi.org/10.1109/ICDCS57875.2023.00037\">https://doi.org/10.1109/ICDCS57875.2023.00037</a>","ieee":"Z. Avarikioti, T. Lizurej, T. Michalak, and M. X. Yeo, “Lightning creation games,” in <i>43rd International Conference on Distributed Computing Systems</i>, Hong Kong, China, 2023, vol. 2023, pp. 603–613.","mla":"Avarikioti, Zeta, et al. “Lightning Creation Games.” <i>43rd International Conference on Distributed Computing Systems</i>, vol. 2023, IEEE, 2023, pp. 603–13, doi:<a href=\"https://doi.org/10.1109/ICDCS57875.2023.00037\">10.1109/ICDCS57875.2023.00037</a>.","ama":"Avarikioti Z, Lizurej T, Michalak T, Yeo MX. Lightning creation games. In: <i>43rd International Conference on Distributed Computing Systems</i>. Vol 2023. IEEE; 2023:603-613. doi:<a href=\"https://doi.org/10.1109/ICDCS57875.2023.00037\">10.1109/ICDCS57875.2023.00037</a>","chicago":"Avarikioti, Zeta, Tomasz Lizurej, Tomasz Michalak, and Michelle X Yeo. “Lightning Creation Games.” In <i>43rd International Conference on Distributed Computing Systems</i>, 2023:603–13. IEEE, 2023. <a href=\"https://doi.org/10.1109/ICDCS57875.2023.00037\">https://doi.org/10.1109/ICDCS57875.2023.00037</a>."},"date_updated":"2026-04-07T13:29:44Z","publisher":"IEEE","language":[{"iso":"eng"}],"title":"Lightning creation games","author":[{"full_name":"Avarikioti, Zeta","first_name":"Zeta","last_name":"Avarikioti"},{"full_name":"Lizurej, Tomasz","first_name":"Tomasz","last_name":"Lizurej"},{"last_name":"Michalak","first_name":"Tomasz","full_name":"Michalak, Tomasz"},{"full_name":"Yeo, Michelle X","id":"2D82B818-F248-11E8-B48F-1D18A9856A87","first_name":"Michelle X","last_name":"Yeo","orcid":"0009-0001-3676-4809"}],"isi":1,"arxiv":1,"type":"conference","date_published":"2023-10-11T00:00:00Z","publication":"43rd International Conference on Distributed Computing Systems","publication_identifier":{"isbn":["9798350339864"],"eissn":["2575-8411"]},"quality_controlled":"1","article_processing_charge":"No","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2306.16006","open_access":"1"}],"oa":1,"status":"public","publication_status":"published","day":"11","doi":"10.1109/ICDCS57875.2023.00037","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","department":[{"_id":"KrPi"}],"oa_version":"Preprint","related_material":{"record":[{"relation":"dissertation_contains","id":"14506","status":"public"}]},"abstract":[{"lang":"eng","text":"Payment channel networks (PCNs) are a promising solution to the scalability problem of cryptocurrencies. Any two users connected by a payment channel in the network can theoretically send an unbounded number of instant, costless transactions between them. Users who are not directly connected can also transact with each other in a multi-hop fashion. In this work, we study the incentive structure behind the creation of payment channel networks, particularly from the point of view of a single user that wants to join the network. We define a utility function for a new user in terms of expected revenue, expected fees, and the cost of creating channels, and then provide constant factor approximation algorithms that optimise the utility function given a certain budget. Additionally, we take a step back from a single user to the whole network and examine the parameter spaces under which simple graph topologies form a Nash equilibrium."}],"date_created":"2023-11-05T23:00:54Z","volume":2023,"external_id":{"isi":["001081242600053"],"arxiv":["2306.16006"]},"scopus_import":"1","intvolume":"      2023"},{"_id":"13128","page":"1280-1295","date_updated":"2026-04-08T13:04:49Z","citation":{"chicago":"Mohammadi, Ali, Thang Pham, and Yiting Wang. “An Energy Decomposition Theorem for Matrices and Related Questions.” <i>Canadian Mathematical Bulletin</i>. Cambridge University Press, 2023. <a href=\"https://doi.org/10.4153/S000843952300036X\">https://doi.org/10.4153/S000843952300036X</a>.","ista":"Mohammadi A, Pham T, Wang Y. 2023. An energy decomposition theorem for matrices and related questions. Canadian Mathematical Bulletin. 66(4), 1280–1295.","short":"A. Mohammadi, T. Pham, Y. Wang, Canadian Mathematical Bulletin 66 (2023) 1280–1295.","apa":"Mohammadi, A., Pham, T., &#38; Wang, Y. (2023). An energy decomposition theorem for matrices and related questions. <i>Canadian Mathematical Bulletin</i>. Cambridge University Press. <a href=\"https://doi.org/10.4153/S000843952300036X\">https://doi.org/10.4153/S000843952300036X</a>","ieee":"A. Mohammadi, T. Pham, and Y. Wang, “An energy decomposition theorem for matrices and related questions,” <i>Canadian Mathematical Bulletin</i>, vol. 66, no. 4. Cambridge University Press, pp. 1280–1295, 2023.","ama":"Mohammadi A, Pham T, Wang Y. An energy decomposition theorem for matrices and related questions. <i>Canadian Mathematical Bulletin</i>. 2023;66(4):1280-1295. doi:<a href=\"https://doi.org/10.4153/S000843952300036X\">10.4153/S000843952300036X</a>","mla":"Mohammadi, Ali, et al. “An Energy Decomposition Theorem for Matrices and Related Questions.” <i>Canadian Mathematical Bulletin</i>, vol. 66, no. 4, Cambridge University Press, 2023, pp. 1280–95, doi:<a href=\"https://doi.org/10.4153/S000843952300036X\">10.4153/S000843952300036X</a>."},"month":"12","language":[{"iso":"eng"}],"publisher":"Cambridge University Press","year":"2023","quality_controlled":"1","publication_identifier":{"issn":["0008-4395"],"eissn":["1496-4287"]},"article_processing_charge":"No","publication":"Canadian Mathematical Bulletin","type":"journal_article","date_published":"2023-12-01T00:00:00Z","author":[{"full_name":"Mohammadi, Ali","last_name":"Mohammadi","first_name":"Ali"},{"last_name":"Pham","first_name":"Thang","full_name":"Pham, Thang"},{"id":"1917d194-076e-11ed-97cd-837255f88785","first_name":"Yiting","last_name":"Wang","full_name":"Wang, Yiting","orcid":"0000-0002-2856-767X"}],"title":"An energy decomposition theorem for matrices and related questions","arxiv":1,"isi":1,"day":"01","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","department":[{"_id":"GradSch"}],"doi":"10.4153/S000843952300036X","status":"public","publication_status":"published","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2106.07328","open_access":"1"}],"oa":1,"issue":"4","intvolume":"        66","external_id":{"isi":["001011963000001"],"arxiv":["2106.07328"]},"scopus_import":"1","abstract":[{"lang":"eng","text":"Given 𝐴 ⊆𝐺⁡𝐿2⁡(𝔽𝑞), we prove that there exist disjoint subsets 𝐵,𝐶 ⊆𝐴 such that 𝐴 =𝐵 ⊔𝐶 and their additive and multiplicative energies satisfying\r\nmax⁡{𝐸+⁡(𝐵),𝐸×⁡(𝐶)}≪|𝐴|3/𝑀⁡(|𝐴|), where\r\n𝑀⁡(|𝐴|)=min⁡{𝑞4/3/|𝐴|1/3⁢(log⁡|𝐴|)2/3, |𝐴|4/5/𝑞13/5⁢(log⁡|𝐴|)27/10}.\r\n \r\nWe also study some related questions on moderate expanders over matrix rings, namely, for 𝐴,𝐵,𝐶 ⊆𝐺⁡𝐿2⁡(𝔽𝑞), we have\r\n|𝐴⁢𝐵+𝐶|, |(𝐴+𝐵)⁢𝐶|≫𝑞4,\r\n whenever |𝐴|⁢|𝐵|⁢|𝐶| ≫𝑞10+1/2. These improve earlier results due to Karabulut, Koh, Pham, Shen, and Vinh ([2019], Expanding phenomena over matrix rings, 𝐹⁡𝑜⁢𝑟⁢𝑢⁢𝑚⁢𝑀⁢𝑎⁢𝑡⁢ℎ., 31, 951–970)."}],"article_type":"original","date_created":"2023-06-11T22:00:40Z","volume":66,"oa_version":"Preprint"},{"language":[{"iso":"eng"}],"publication_status":"submitted","month":"11","citation":{"short":"S.Z. Uddin, N. Rivera, D. Seyler, J. Sloan, Y. Salamin, C. Roques-Carmes, S. Xu, M. Sander, I. Kaminer, M. Soljacic, ArXiv (n.d.).","apa":"Uddin, S. Z., Rivera, N., Seyler, D., Sloan, J., Salamin, Y., Roques-Carmes, C., … Soljacic, M. (n.d.). Noise-immune quantum correlations of intense light. <i>arXiv</i>. <a href=\"https://doi.org/10.48550/arXiv.2311.05535\">https://doi.org/10.48550/arXiv.2311.05535</a>","ista":"Uddin SZ, Rivera N, Seyler D, Sloan J, Salamin Y, Roques-Carmes C, Xu S, Sander M, Kaminer I, Soljacic M. Noise-immune quantum correlations of intense light. arXiv, 2311.05535.","ama":"Uddin SZ, Rivera N, Seyler D, et al. Noise-immune quantum correlations of intense light. <i>arXiv</i>. doi:<a href=\"https://doi.org/10.48550/arXiv.2311.05535\">10.48550/arXiv.2311.05535</a>","mla":"Uddin, Shiekh Zia, et al. “Noise-Immune Quantum Correlations of Intense Light.” <i>ArXiv</i>, 2311.05535, doi:<a href=\"https://doi.org/10.48550/arXiv.2311.05535\">10.48550/arXiv.2311.05535</a>.","ieee":"S. Z. Uddin <i>et al.</i>, “Noise-immune quantum correlations of intense light,” <i>arXiv</i>. .","chicago":"Uddin, Shiekh Zia, Nicholas Rivera, Devin Seyler, Jamison Sloan, Yannick Salamin, Charles Roques-Carmes, Shutao Xu, Michelle Sander, Ido Kaminer, and Marin Soljacic. “Noise-Immune Quantum Correlations of Intense Light.” <i>ArXiv</i>, n.d. <a href=\"https://doi.org/10.48550/arXiv.2311.05535\">https://doi.org/10.48550/arXiv.2311.05535</a>."},"_id":"21677","date_updated":"2026-04-13T09:43:17Z","status":"public","doi":"10.48550/arXiv.2311.05535","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","day":"09","OA_place":"repository","year":"2023","oa":1,"extern":"1","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2311.05535","open_access":"1"}],"publication":"arXiv","scopus_import":"1","external_id":{"arxiv":["2311.05535"]},"article_processing_charge":"No","OA_type":"green","arxiv":1,"title":"Noise-immune quantum correlations of intense light","oa_version":"Preprint","author":[{"full_name":"Uddin, Shiekh Zia","last_name":"Uddin","first_name":"Shiekh Zia"},{"full_name":"Rivera, Nicholas","first_name":"Nicholas","last_name":"Rivera"},{"full_name":"Seyler, Devin","last_name":"Seyler","first_name":"Devin"},{"full_name":"Sloan, Jamison","first_name":"Jamison","last_name":"Sloan"},{"first_name":"Yannick","last_name":"Salamin","full_name":"Salamin, Yannick"},{"last_name":"Roques-Carmes","id":"e2e68fc9-6505-11ef-a541-eb4e72cc3e82","first_name":"Charles","full_name":"Roques-Carmes, Charles"},{"full_name":"Xu, Shutao","last_name":"Xu","first_name":"Shutao"},{"full_name":"Sander, Michelle","first_name":"Michelle","last_name":"Sander"},{"first_name":"Ido","last_name":"Kaminer","full_name":"Kaminer, Ido"},{"last_name":"Soljacic","first_name":"Marin","full_name":"Soljacic, Marin"}],"date_published":"2023-11-09T00:00:00Z","date_created":"2026-04-09T09:10:41Z","article_number":"2311.05535","type":"preprint","abstract":[{"text":"Lasers with high intensity generally exhibit strong intensity fluctuations far above the shot-noise level. Taming this noise is pivotal to a wide range of applications, both classical and quantum. Here, we demonstrate the creation of intense light with quantum levels of noise even when starting from inputs with large amounts of excess noise. In particular, we demonstrate how intense squeezed light with intensities approaching 0.1 TW/cm^2, but noise at or below the shot noise level, can be produced from noisy inputs associated with high-power amplified laser sources (an overall noise-reduction of 30-fold). Based on a new theory of quantum noise in multimode systems, we show that the ability to generate quantum light from noisy inputs results from multimode quantum correlations, which maximally decouple the output light from the dominant noise channels in the input light. As an example, we demonstrate this effect for femtosecond pulses in nonlinear fibers, but the noise-immune correlations that enable our results are generic to many other nonlinear systems in optics and beyond.","lang":"eng"}]},{"publication_status":"published","status":"public","doi":"10.1016/j.conb.2023.102695","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","department":[{"_id":"SiHi"}],"project":[{"name":"Stem Cell Modulation in Neural Development and Regeneration/ P05-Molecular Mechanisms of Neural Stem Cell Lineage Progression","grant_number":"F7805","_id":"059F6AB4-7A3F-11EA-A408-12923DDC885E"},{"grant_number":"725780","_id":"260018B0-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","name":"Principles of Neural Stem Cell Lineage Progression in Cerebral Cortex Development"}],"day":"01","issue":"4","keyword":["General Neuroscience"],"file_date_updated":"2023-08-16T12:29:06Z","oa":1,"scopus_import":"1","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"external_id":{"pmid":["36842274"],"isi":["000953497700001"]},"intvolume":"        79","pmid":1,"oa_version":"Published Version","date_created":"2023-02-26T12:24:21Z","volume":79,"article_type":"review","article_number":"102695","abstract":[{"text":"How to generate a brain of correct size and with appropriate cell-type diversity during development is a major question in Neuroscience. In the developing neocortex, radial glial progenitor (RGP) cells are the main neural stem cells that produce cortical excitatory projection neurons, glial cells, and establish the prospective postnatal stem cell niche in the lateral ventricles. RGPs follow a tightly orchestrated developmental program that when disrupted can result in severe cortical malformations such as microcephaly and megalencephaly. The precise cellular and molecular mechanisms instructing faithful RGP lineage progression are however not well understood. This review will summarize recent conceptual advances that contribute to our understanding of the general principles of RGP lineage progression.","lang":"eng"}],"corr_author":"1","publisher":"Elsevier","language":[{"iso":"eng"}],"month":"04","date_updated":"2025-04-15T08:23:06Z","_id":"12679","citation":{"short":"S. Hippenmeyer, Current Opinion in Neurobiology 79 (2023).","apa":"Hippenmeyer, S. (2023). Principles of neural stem cell lineage progression: Insights from developing cerebral cortex. <i>Current Opinion in Neurobiology</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.conb.2023.102695\">https://doi.org/10.1016/j.conb.2023.102695</a>","ista":"Hippenmeyer S. 2023. Principles of neural stem cell lineage progression: Insights from developing cerebral cortex. Current Opinion in Neurobiology. 79(4), 102695.","mla":"Hippenmeyer, Simon. “Principles of Neural Stem Cell Lineage Progression: Insights from Developing Cerebral Cortex.” <i>Current Opinion in Neurobiology</i>, vol. 79, no. 4, 102695, Elsevier, 2023, doi:<a href=\"https://doi.org/10.1016/j.conb.2023.102695\">10.1016/j.conb.2023.102695</a>.","ama":"Hippenmeyer S. Principles of neural stem cell lineage progression: Insights from developing cerebral cortex. <i>Current Opinion in Neurobiology</i>. 2023;79(4). doi:<a href=\"https://doi.org/10.1016/j.conb.2023.102695\">10.1016/j.conb.2023.102695</a>","ieee":"S. Hippenmeyer, “Principles of neural stem cell lineage progression: Insights from developing cerebral cortex,” <i>Current Opinion in Neurobiology</i>, vol. 79, no. 4. Elsevier, 2023.","chicago":"Hippenmeyer, Simon. “Principles of Neural Stem Cell Lineage Progression: Insights from Developing Cerebral Cortex.” <i>Current Opinion in Neurobiology</i>. Elsevier, 2023. <a href=\"https://doi.org/10.1016/j.conb.2023.102695\">https://doi.org/10.1016/j.conb.2023.102695</a>."},"file":[{"relation":"main_file","content_type":"application/pdf","success":1,"access_level":"open_access","date_updated":"2023-08-16T12:29:06Z","file_size":1787894,"checksum":"4d11c4ca87e6cbc4d2ac46d3225ea615","date_created":"2023-08-16T12:29:06Z","file_name":"2023_CurrentOpinionNeurobio_Hippenmeyer.pdf","creator":"dernst","file_id":"14071"}],"acknowledgement":"I wish to thank all current and past members of the Hippenmeyer laboratory at ISTA for exciting discussions on the subject of this review. I apologize to colleagues whose work I could not cite and/or discuss in the frame of the available space. Work in the Hippenmeyer laboratory on the\r\ndiscussed topic is supported by ISTA institutional funds, FWF SFB F78 to S.H., and the European Research Council (ERC) under the European Union’s Horizon 2020 Research and Innovation Programme (grant agree-ment no. 725780 LinPro) to SH.","year":"2023","publication":"Current Opinion in Neurobiology","ddc":["570"],"article_processing_charge":"Yes (via OA deal)","publication_identifier":{"issn":["0959-4388"]},"quality_controlled":"1","isi":1,"ec_funded":1,"title":"Principles of neural stem cell lineage progression: Insights from developing cerebral cortex","author":[{"full_name":"Hippenmeyer, Simon","first_name":"Simon","id":"37B36620-F248-11E8-B48F-1D18A9856A87","last_name":"Hippenmeyer","orcid":"0000-0003-2279-1061"}],"date_published":"2023-04-01T00:00:00Z","has_accepted_license":"1","type":"journal_article"}]