[{"citation":{"ama":"Schwartz E, Bronstein AM, Giryes R. ISP Distillation. IEEE Open Journal of Signal Processing. 2023;4:12-20. doi:10.1109/ojsp.2023.3239819","short":"E. Schwartz, A.M. Bronstein, R. Giryes, IEEE Open Journal of Signal Processing 4 (2023) 12–20.","mla":"Schwartz, Eli, et al. “ISP Distillation.” IEEE Open Journal of Signal Processing, vol. 4, Institute of Electrical and Electronics Engineers, 2023, pp. 12–20, doi:10.1109/ojsp.2023.3239819.","chicago":"Schwartz, Eli, Alex M. Bronstein, and Raja Giryes. “ISP Distillation.” IEEE Open Journal of Signal Processing. Institute of Electrical and Electronics Engineers, 2023. https://doi.org/10.1109/ojsp.2023.3239819.","ista":"Schwartz E, Bronstein AM, Giryes R. 2023. ISP Distillation. IEEE Open Journal of Signal Processing. 4, 12–20.","apa":"Schwartz, E., Bronstein, A. M., & Giryes, R. (2023). ISP Distillation. IEEE Open Journal of Signal Processing. Institute of Electrical and Electronics Engineers. https://doi.org/10.1109/ojsp.2023.3239819","ieee":"E. Schwartz, A. M. Bronstein, and R. Giryes, “ISP Distillation,” IEEE Open Journal of Signal Processing, vol. 4. Institute of Electrical and Electronics Engineers, pp. 12–20, 2023."},"intvolume":" 4","quality_controlled":"1","type":"journal_article","page":"12-20","date_published":"2023-01-25T00:00:00Z","oa":1,"publication":"IEEE Open Journal of Signal Processing","publication_status":"published","scopus_import":"1","date_updated":"2024-10-09T12:24:13Z","_id":"18219","external_id":{"arxiv":["2101.10203"]},"date_created":"2024-10-08T12:51:32Z","article_type":"original","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","abstract":[{"lang":"eng","text":"Nowadays, many of the images captured are ‘observed’ by machines only and not by humans, e.g., in autonomous systems. High-level machine vision models, such as object recognition or semantic segmentation, assume images are transformed into some canonical image space by the camera Image Signal Processor (ISP). However, the camera ISP is optimized for producing visually pleasing images for human observers and not for machines. Therefore, one may spare the ISP compute time and apply vision models directly to RAW images. Yet, it has been shown that training such models directly on RAW images results in a performance drop. To mitigate this drop, we use a RAW and RGB image pairs dataset, which can be easily acquired with no human labeling. We then train a model that is applied directly to the RAW data by using knowledge distillation such that the model predictions for RAW images will be aligned with the predictions of an off-the-shelf pre-trained model for processed RGB images. Our experiments show that our performance on RAW images for object classification and semantic segmentation is significantly better than models trained on labeled RAW images. It also reasonably matches the predictions of a pre-trained model on processed RGB images, while saving the ISP compute overhead."}],"oa_version":"Published Version","arxiv":1,"day":"25","publication_identifier":{"issn":["2644-1322"]},"author":[{"first_name":"Eli","full_name":"Schwartz, Eli","last_name":"Schwartz"},{"last_name":"Bronstein","id":"58f3726e-7cba-11ef-ad8b-e6e8cb3904e6","first_name":"Alexander","full_name":"Bronstein, Alexander","orcid":"0000-0001-9699-8730"},{"last_name":"Giryes","full_name":"Giryes, Raja","first_name":"Raja"}],"article_processing_charge":"No","year":"2023","publisher":"Institute of Electrical and Electronics Engineers","extern":"1","volume":4,"status":"public","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1109/OJSP.2023.3239819"}],"doi":"10.1109/ojsp.2023.3239819","language":[{"iso":"eng"}],"title":"ISP Distillation","month":"01"},{"OA_type":"green","issue":"7","author":[{"last_name":"Killip","first_name":"Rowan","full_name":"Killip, Rowan"},{"last_name":"Ouyang","full_name":"Ouyang, Zhimeng","first_name":"Zhimeng"},{"last_name":"Visan","full_name":"Visan, Monica","id":"056daca0-b8d1-11f0-964f-f91054abf8ca","first_name":"Monica"},{"last_name":"Wu","first_name":"Lei","full_name":"Wu, Lei"}],"article_processing_charge":"No","status":"public","mathsc":["35Q55","37K05","37K10"],"main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2206.02720","open_access":"1"}],"doi":"10.1088/1361-6544/acd978","title":"Continuum limit for the Ablowitz–Ladik system","language":[{"iso":"eng"}],"keyword":["Ablowitz–Ladik","continuum limit","cubic NLS"],"month":"06","publisher":"IOP Publishing","year":"2023","extern":"1","das_tickbox":"1","volume":36,"page":"3751-3775","type":"journal_article","OA_place":"repository","date_published":"2023-06-09T00:00:00Z","oa":1,"publication":"Nonlinearity","publication_status":"published","citation":{"apa":"Killip, R., Ouyang, Z., Vişan, M., & Wu, L. (2023). Continuum limit for the Ablowitz–Ladik system. Nonlinearity. IOP Publishing. https://doi.org/10.1088/1361-6544/acd978","ieee":"R. Killip, Z. Ouyang, M. Vişan, and L. Wu, “Continuum limit for the Ablowitz–Ladik system,” Nonlinearity, vol. 36, no. 7. IOP Publishing, pp. 3751–3775, 2023.","ista":"Killip R, Ouyang Z, Vişan M, Wu L. 2023. Continuum limit for the Ablowitz–Ladik system. Nonlinearity. 36(7), 3751–3775.","chicago":"Killip, Rowan, Zhimeng Ouyang, Monica Vişan, and Lei Wu. “Continuum Limit for the Ablowitz–Ladik System.” Nonlinearity. IOP Publishing, 2023. https://doi.org/10.1088/1361-6544/acd978.","mla":"Killip, Rowan, et al. “Continuum Limit for the Ablowitz–Ladik System.” Nonlinearity, vol. 36, no. 7, IOP Publishing, 2023, pp. 3751–75, doi:10.1088/1361-6544/acd978.","short":"R. Killip, Z. Ouyang, M. Vişan, L. Wu, Nonlinearity 36 (2023) 3751–3775.","ama":"Killip R, Ouyang Z, Vişan M, Wu L. Continuum limit for the Ablowitz–Ladik system. Nonlinearity. 2023;36(7):3751-3775. doi:10.1088/1361-6544/acd978"},"intvolume":" 36","quality_controlled":"1","external_id":{"arxiv":["2206.02720"]},"date_created":"2026-06-19T07:49:24Z","article_type":"original","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","abstract":[{"lang":"eng","text":"We show that solutions to the Ablowitz–Ladik system converge to solutions of the cubic nonlinear Schrödinger equation for merely L2 initial data. Furthermore, we consider initial data for this lattice model that excites Fourier modes near both critical points of the discrete dispersion relation and demonstrate convergence to a decoupled system of nonlinear Schrödinger equations."}],"oa_version":"Preprint","arxiv":1,"publication_identifier":{"eissn":["1361-6544"],"issn":["0951-7715"]},"day":"09","scopus_import":"1","date_updated":"2026-06-25T07:54:44Z","_id":"22046"},{"title":"On the well-posedness problem for the derivativenonlinear Schrödinger equation","language":[{"iso":"eng"}],"has_accepted_license":"1","month":"08","status":"public","mathsc":["35Q55"],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.2140/apde.2023.16.1245"}],"doi":"10.2140/apde.2023.16.1245","volume":16,"publisher":"Mathematical Sciences Publishers","year":"2023","extern":"1","das_tickbox":"1","OA_type":"diamond","author":[{"first_name":"Rowan","full_name":"Killip, Rowan","last_name":"Killip"},{"last_name":"Ntekoume","first_name":"Maria","full_name":"Ntekoume, Maria"},{"last_name":"Visan","id":"056daca0-b8d1-11f0-964f-f91054abf8ca","first_name":"Monica","full_name":"Visan, Monica"}],"article_processing_charge":"No","issue":"5","arxiv":1,"oa_version":"Published Version","publication_identifier":{"eissn":["1948-206X"],"issn":["2157-5045"]},"day":"12","ddc":["500"],"date_created":"2026-06-19T08:15:32Z","external_id":{"arxiv":["2101.12274"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_type":"original","abstract":[{"lang":"eng","text":"We consider the derivative nonlinear Schrödinger equation in one space dimension, posed both on the line and on the circle. This model is known to be completely integrable and L^2-critical with respect to scaling. We first discuss whether ensembles of orbits with L^2-equicontinuous initial data remain equicontinuous under evolution. We prove that this is true under the restriction \r\nM(q)=∫∣∣q∣∣2<4π. We conjecture that this restriction is unnecessary. Further, we prove that the problem is globally well posed for initial data in H1∕6 under the same restriction on M. Moreover, we show that this restriction would be removed by a successful resolution of our equicontinuity conjecture."}],"date_updated":"2026-06-30T07:20:56Z","_id":"22067","scopus_import":"1","publication":"Analysis & PDE","publication_status":"published","page":"1245-1270","type":"journal_article","OA_place":"publisher","date_published":"2023-08-12T00:00:00Z","oa":1,"tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"quality_controlled":"1","citation":{"mla":"Killip, Rowan, et al. “On the Well-Posedness Problem for the Derivativenonlinear Schrödinger Equation.” Analysis & PDE, vol. 16, no. 5, Mathematical Sciences Publishers, 2023, pp. 1245–70, doi:10.2140/apde.2023.16.1245.","chicago":"Killip, Rowan, Maria Ntekoume, and Monica Vişan. “On the Well-Posedness Problem for the Derivativenonlinear Schrödinger Equation.” Analysis & PDE. Mathematical Sciences Publishers, 2023. https://doi.org/10.2140/apde.2023.16.1245.","apa":"Killip, R., Ntekoume, M., & Vişan, M. (2023). On the well-posedness problem for the derivativenonlinear Schrödinger equation. Analysis & PDE. Mathematical Sciences Publishers. https://doi.org/10.2140/apde.2023.16.1245","ista":"Killip R, Ntekoume M, Vişan M. 2023. On the well-posedness problem for the derivativenonlinear Schrödinger equation. Analysis & PDE. 16(5), 1245–1270.","ieee":"R. Killip, M. Ntekoume, and M. Vişan, “On the well-posedness problem for the derivativenonlinear Schrödinger equation,” Analysis & PDE, vol. 16, no. 5. Mathematical Sciences Publishers, pp. 1245–1270, 2023.","ama":"Killip R, Ntekoume M, Vişan M. On the well-posedness problem for the derivativenonlinear Schrödinger equation. Analysis & PDE. 2023;16(5):1245-1270. doi:10.2140/apde.2023.16.1245","short":"R. Killip, M. Ntekoume, M. Vişan, Analysis & PDE 16 (2023) 1245–1270."},"intvolume":" 16"},{"issue":"6","article_processing_charge":"No","author":[{"last_name":"Killip","full_name":"Killip, Rowan","first_name":"Rowan"},{"full_name":"Murphy, Jason","first_name":"Jason","last_name":"Murphy"},{"id":"056daca0-b8d1-11f0-964f-f91054abf8ca","first_name":"Monica","full_name":"Visan, Monica","last_name":"Visan"}],"OA_type":"green","das_tickbox":"1","extern":"1","year":"2023","publisher":"American Mathematical Society","volume":151,"doi":"10.1090/proc/16297","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2207.02414"}],"status":"public","mathsc":["35Q55"],"month":"06","title":"The scattering map determines the nonlinearity","language":[{"iso":"eng"}],"intvolume":" 151","citation":{"mla":"Killip, Rowan, et al. “The Scattering Map Determines the Nonlinearity.” Proceedings of the American Mathematical Society, vol. 151, no. 6, American Mathematical Society, 2023, pp. 2543–57, doi:10.1090/proc/16297.","chicago":"Killip, Rowan, Jason Murphy, and Monica Vişan. “The Scattering Map Determines the Nonlinearity.” Proceedings of the American Mathematical Society. American Mathematical Society, 2023. https://doi.org/10.1090/proc/16297.","apa":"Killip, R., Murphy, J., & Vişan, M. (2023). The scattering map determines the nonlinearity. Proceedings of the American Mathematical Society. American Mathematical Society. https://doi.org/10.1090/proc/16297","ieee":"R. Killip, J. Murphy, and M. Vişan, “The scattering map determines the nonlinearity,” Proceedings of the American Mathematical Society, vol. 151, no. 6. American Mathematical Society, pp. 2543–2557, 2023.","ista":"Killip R, Murphy J, Vişan M. 2023. The scattering map determines the nonlinearity. Proceedings of the American Mathematical Society. 151(6), 2543–2557.","ama":"Killip R, Murphy J, Vişan M. The scattering map determines the nonlinearity. Proceedings of the American Mathematical Society. 2023;151(6):2543-2557. doi:10.1090/proc/16297","short":"R. Killip, J. Murphy, M. Vişan, Proceedings of the American Mathematical Society 151 (2023) 2543–2557."},"quality_controlled":"1","oa":1,"date_published":"2023-06-01T00:00:00Z","OA_place":"repository","page":"2543-2557","type":"journal_article","publication_status":"published","publication":"Proceedings of the American Mathematical Society","scopus_import":"1","_id":"22064","date_updated":"2026-06-30T07:08:20Z","abstract":[{"lang":"eng","text":"Using the two-dimensional nonlinear Schrödinger equation as a model example, we present a general method for recovering the nonlinearity of a nonlinear dispersive equation from its small-data scattering behavior. We prove that under very mild assumptions on the nonlinearity, the wave operator uniquely determines the nonlinearity, as does the scattering map. Evaluating the scattering map on well-chosen initial data, we reduce the problem to an inverse convolution problem, which we solve by means of an application of the Beurling–Lax Theorem."}],"article_type":"original","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","external_id":{"arxiv":["2207.02414"]},"date_created":"2026-06-19T08:12:42Z","day":"01","publication_identifier":{"eissn":["1088-6826"],"issn":["0002-9939"]},"arxiv":1,"oa_version":"Preprint"},{"date_updated":"2026-06-30T10:56:42Z","_id":"22072","scopus_import":"1","oa_version":"Preprint","arxiv":1,"day":"01","publication_identifier":{"issn":["1073-7928"],"eissn":["1687-0247"]},"external_id":{"arxiv":["2106.13333"]},"date_created":"2026-06-19T08:22:03Z","abstract":[{"lang":"eng","text":"We consider the derivative nonlinear Schrödinger equation in one spatial dimension, which is known to be completely integrable. We prove that the orbits of L^2 bounded and equicontinuous sets of initial data remain bounded and equicontinuous, not only under this flow, but also under the entire hierarchy. This allows us to remove the small-data restriction from prior conservation laws and global well-posedness results."}],"article_type":"original","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","quality_controlled":"1","citation":{"mla":"Harrop-Griffiths, Benjamin, et al. “Large-Data Equicontinuity for the Derivative NLS.” International Mathematics Research Notices, vol. 2023, no. 6, Oxford University Press, 2023, pp. 4601–42, doi:10.1093/imrn/rnab374.","ieee":"B. Harrop-Griffiths, R. Killip, and M. Vişan, “Large-data equicontinuity for the derivative NLS,” International Mathematics Research Notices, vol. 2023, no. 6. Oxford University Press, pp. 4601–4642, 2023.","apa":"Harrop-Griffiths, B., Killip, R., & Vişan, M. (2023). Large-data equicontinuity for the derivative NLS. International Mathematics Research Notices. Oxford University Press. https://doi.org/10.1093/imrn/rnab374","ista":"Harrop-Griffiths B, Killip R, Vişan M. 2023. Large-data equicontinuity for the derivative NLS. International Mathematics Research Notices. 2023(6), 4601–4642.","chicago":"Harrop-Griffiths, Benjamin, Rowan Killip, and Monica Vişan. “Large-Data Equicontinuity for the Derivative NLS.” International Mathematics Research Notices. Oxford University Press, 2023. https://doi.org/10.1093/imrn/rnab374.","short":"B. Harrop-Griffiths, R. Killip, M. Vişan, International Mathematics Research Notices 2023 (2023) 4601–4642.","ama":"Harrop-Griffiths B, Killip R, Vişan M. Large-data equicontinuity for the derivative NLS. 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Intensification mechanisms of tropical cyclones. EGU General Assembly 2023. EGU General Assembly, EGU23-6157.","ieee":"A. Polesello, C. J. Muller, C. Pasquero, and A. N. Meroni, “Intensification mechanisms of tropical cyclones,” in EGU General Assembly 2023, Vienna, Austria & Virtual, 2023.","apa":"Polesello, A., Muller, C. J., Pasquero, C., & Meroni, A. N. (2023). Intensification mechanisms of tropical cyclones. In EGU General Assembly 2023. Vienna, Austria & Virtual: European Geosciences Union. https://doi.org/10.5194/egusphere-egu23-6157","chicago":"Polesello, Andrea, Caroline J Muller, Claudia Pasquero, and Agostino N. Meroni. “Intensification Mechanisms of Tropical Cyclones.” In EGU General Assembly 2023. European Geosciences Union, 2023. https://doi.org/10.5194/egusphere-egu23-6157.","mla":"Polesello, Andrea, et al. “Intensification Mechanisms of Tropical Cyclones.” EGU General Assembly 2023, EGU23-6157, European Geosciences Union, 2023, doi:10.5194/egusphere-egu23-6157.","short":"A. Polesello, C.J. Muller, C. Pasquero, A.N. Meroni, in:, EGU General Assembly 2023, European Geosciences Union, 2023.","ama":"Polesello A, Muller CJ, Pasquero C, Meroni AN. Intensification mechanisms of tropical cyclones. In: EGU General Assembly 2023. 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Navarro. “A 3D Glacier Dynamics-Line Plume Model to Estimate the Frontal Ablation of Hansbreen, Svalbard.” In EGU General Assembly 2023. European Geosciences Union, 2023. https://doi.org/10.5194/egusphere-egu23-5510.","ista":"Muñoz Hermosilla JM, De Andrés E, Shahateet K, Otero J, Navarro FJ. 2023. A 3D glacier dynamics-line plume model to estimate the frontal ablation of Hansbreen, Svalbard. EGU General Assembly 2023. EGU General Assembly, EGU23-5510.","ieee":"J. M. Muñoz Hermosilla, E. De Andrés, K. Shahateet, J. Otero, and F. J. Navarro, “A 3D glacier dynamics-line plume model to estimate the frontal ablation of Hansbreen, Svalbard,” in EGU General Assembly 2023, Vienna, Austria & Virtual, 2023.","apa":"Muñoz Hermosilla, J. M., De Andrés, E., Shahateet, K., Otero, J., & Navarro, F. J. (2023). A 3D glacier dynamics-line plume model to estimate the frontal ablation of Hansbreen, Svalbard. In EGU General Assembly 2023. Vienna, Austria & Virtual: European Geosciences Union. https://doi.org/10.5194/egusphere-egu23-5510","ama":"Muñoz Hermosilla JM, De Andrés E, Shahateet K, Otero J, Navarro FJ. A 3D glacier dynamics-line plume model to estimate the frontal ablation of Hansbreen, Svalbard. In: EGU General Assembly 2023. European Geosciences Union; 2023. doi:10.5194/egusphere-egu23-5510","short":"J.M. Muñoz Hermosilla, E. De Andrés, K. Shahateet, J. Otero, F.J. Navarro, in:, EGU General Assembly 2023, European Geosciences Union, 2023."},"has_accepted_license":"1","oa_version":"None","language":[{"iso":"eng"}],"title":"A 3D glacier dynamics-line plume model to estimate the frontal ablation of Hansbreen, Svalbard","day":"14","month":"09","date_created":"2026-06-22T12:19:10Z","status":"public","ddc":["550"],"doi":"10.5194/egusphere-egu23-5510","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_updated":"2026-07-02T07:13:16Z","_id":"22125","related_material":{"record":[{"status":"public","id":"22123","relation":"later_version"}]},"extern":"1","year":"2023","publisher":"European Geosciences Union"},{"intvolume":" 14","corr_author":"1","isi":1,"citation":{"short":"N. Carqueville, L. Szegedy, Quantum Topology 14 (2023) 467–532.","ama":"Carqueville N, Szegedy L. Fully extended r-spin TQFTs. Quantum Topology. 2023;14(3):467-532. doi:10.4171/qt/193","mla":"Carqueville, Nils, and Lorant Szegedy. “Fully Extended R-Spin TQFTs.” Quantum Topology, vol. 14, no. 3, EMS Press, 2023, pp. 467–532, doi:10.4171/qt/193.","ieee":"N. Carqueville and L. Szegedy, “Fully extended r-spin TQFTs,” Quantum Topology, vol. 14, no. 3. EMS Press, pp. 467–532, 2023.","apa":"Carqueville, N., & Szegedy, L. (2023). Fully extended r-spin TQFTs. Quantum Topology. EMS Press. https://doi.org/10.4171/qt/193","ista":"Carqueville N, Szegedy L. 2023. Fully extended r-spin TQFTs. Quantum Topology. 14(3), 467–532.","chicago":"Carqueville, Nils, and Lorant Szegedy. “Fully Extended R-Spin TQFTs.” Quantum Topology. EMS Press, 2023. https://doi.org/10.4171/qt/193."},"quality_controlled":"1","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"oa":1,"date_published":"2023-10-16T00:00:00Z","page":"467-532","type":"journal_article","publication_status":"published","publication":"Quantum Topology","scopus_import":"1","acknowledgement":"N.C. is supported by the DFG Heisenberg Programme.\r\nWe are grateful to Tobias Dyckerhoff, Lukas Müller, Ingo Runkel, and Christopher Schommer-Pries for helpful discussions.","_id":"14756","file":[{"file_id":"14764","date_updated":"2024-01-09T09:25:34Z","content_type":"application/pdf","success":1,"file_size":707344,"creator":"dernst","access_level":"open_access","checksum":"b0590aff6e7ec89cc149ba94d459d3a3","relation":"main_file","file_name":"2023_QuantumTopol_Carqueville.pdf","date_created":"2024-01-09T09:25:34Z"}],"date_updated":"2026-07-06T11:52:15Z","file_date_updated":"2024-01-09T09:25:34Z","abstract":[{"lang":"eng","text":"We prove the r-spin cobordism hypothesis in the setting of (weak) 2-categories for every positive integer r: the 2-groupoid of 2-dimensional fully extended r-spin TQFTs with given target is equivalent to the homotopy fixed points of an induced Spin 2r -action. In particular, such TQFTs are classified by fully dualisable objects together with a trivialisation of the rth power of their Serre automorphisms. For r=1, we recover the oriented case (on which our proof builds), while ordinary spin structures correspond to r=2.\r\nTo construct examples, we explicitly describe Spin 2r-homotopy fixed points in the equivariant completion of any symmetric monoidal 2-category. We also show that every object in a 2-category of Landau–Ginzburg models gives rise to fully extended spin TQFTs and that half of these do not factor through the oriented bordism 2-category."}],"article_type":"original","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2024-01-08T13:14:48Z","external_id":{"isi":["001104620800003"]},"ddc":["530"],"day":"16","publication_identifier":{"issn":["1663-487X"]},"oa_version":"Published Version","issue":"3","article_processing_charge":"Yes","author":[{"last_name":"Carqueville","first_name":"Nils","full_name":"Carqueville, Nils"},{"last_name":"Szegedy","id":"7943226E-220E-11EA-94C7-D59F3DDC885E","first_name":"Lorant","full_name":"Szegedy, Lorant","orcid":"0000-0003-2834-5054"}],"das_tickbox":"1","year":"2023","publisher":"EMS Press","volume":14,"doi":"10.4171/qt/193","department":[{"_id":"MiLe"}],"status":"public","month":"10","has_accepted_license":"1","keyword":["Geometry and Topology","Mathematical Physics"],"language":[{"iso":"eng"}],"title":"Fully extended r-spin TQFTs"},{"month":"06","has_accepted_license":"1","title":"CQS: A formally-verified framework for fair and abortable synchronization","language":[{"iso":"eng"}],"department":[{"_id":"DaAl"}],"doi":"10.1145/3591230","status":"public","volume":7,"das_tickbox":"1","publisher":"Association for Computing Machinery","year":"2023","article_processing_charge":"No","author":[{"last_name":"Koval","first_name":"Nikita","id":"2F4DB10C-F248-11E8-B48F-1D18A9856A87","full_name":"Koval, Nikita"},{"first_name":"Dmitry","full_name":"Khalanskiy, Dmitry","last_name":"Khalanskiy"},{"last_name":"Alistarh","full_name":"Alistarh, Dan-Adrian","orcid":"0000-0003-3650-940X","id":"4A899BFC-F248-11E8-B48F-1D18A9856A87","first_name":"Dan-Adrian"}],"day":"06","publication_identifier":{"eissn":["2475-1421"]},"oa_version":"Published Version","abstract":[{"lang":"eng","text":"Writing concurrent code that is both correct and efficient is notoriously difficult. Thus, programmers often prefer to use synchronization abstractions, which render code simpler and easier to reason about. Despite a wealth of work on this topic, there is still a gap between the rich semantics provided by synchronization abstractions in modern programming languages—specifically, fair FIFO ordering of synchronization requests and support for abortable operations—and frameworks for implementing it correctly and efficiently. Supporting such semantics is critical given the rising popularity of constructs for asynchronous programming, such as coroutines, which abort frequently and are cheaper to suspend and resume compared to native threads.\r\n\r\nThis paper introduces a new framework called CancellableQueueSynchronizer (CQS), which enables simple yet efficient implementations of a wide range of fair and abortable synchronization primitives: mutexes, semaphores, barriers, count-down latches, and blocking pools. Our main contribution is algorithmic, as implementing both fairness and abortability efficiently at this level of generality is non-trivial. Importantly, all our algorithms, including the CQS framework and the primitives built on top of it, come with formal proofs in the Iris framework for Coq for many of their properties. These proofs are modular, so it is easy to show correctness for new primitives implemented on top of CQS. From a practical perspective, implementation of CQS for native threads on the JVM improves throughput by up to two orders of magnitude over Java’s AbstractQueuedSynchronizer, the only practical abstraction offering similar semantics. Further, we successfully integrated CQS as a core component of the popular Kotlin Coroutines library, validating the framework’s practical impact and expressiveness in a real-world environment. In sum, CancellableQueueSynchronizer is the first framework to combine expressiveness with formal guarantees and solid practical performance. Our approach should be extensible to other languages and families of synchronization primitives."}],"article_type":"original","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2023-07-02T22:00:43Z","ddc":["000"],"_id":"13179","file":[{"success":1,"date_updated":"2023-07-03T13:09:39Z","content_type":"application/pdf","file_id":"13187","creator":"alisjak","file_size":1266773,"checksum":"5dba6e73f0ed79adbdae14d165bc2f68","access_level":"open_access","date_created":"2023-07-03T13:09:39Z","file_name":"2023_ACMProgram.Lang._Koval.pdf","relation":"main_file"}],"file_date_updated":"2023-07-03T13:09:39Z","date_updated":"2026-07-06T12:12:08Z","scopus_import":"1","publication_status":"published","article_number":"116","publication":"Proceedings of the ACM on Programming Languages","oa":1,"date_published":"2023-06-06T00:00:00Z","type":"journal_article","quality_controlled":"1","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"intvolume":" 7","corr_author":"1","citation":{"ama":"Koval N, Khalanskiy D, Alistarh D-A. CQS: A formally-verified framework for fair and abortable synchronization. Proceedings of the ACM on Programming Languages. 2023;7. doi:10.1145/3591230","short":"N. Koval, D. Khalanskiy, D.-A. Alistarh, Proceedings of the ACM on Programming Languages 7 (2023).","chicago":"Koval, Nikita, Dmitry Khalanskiy, and Dan-Adrian Alistarh. “CQS: A Formally-Verified Framework for Fair and Abortable Synchronization.” Proceedings of the ACM on Programming Languages. Association for Computing Machinery, 2023. https://doi.org/10.1145/3591230.","apa":"Koval, N., Khalanskiy, D., & Alistarh, D.-A. (2023). CQS: A formally-verified framework for fair and abortable synchronization. Proceedings of the ACM on Programming Languages. Association for Computing Machinery. https://doi.org/10.1145/3591230","ieee":"N. Koval, D. Khalanskiy, and D.-A. Alistarh, “CQS: A formally-verified framework for fair and abortable synchronization,” Proceedings of the ACM on Programming Languages, vol. 7. Association for Computing Machinery, 2023.","ista":"Koval N, Khalanskiy D, Alistarh D-A. 2023. CQS: A formally-verified framework for fair and abortable synchronization. Proceedings of the ACM on Programming Languages. 7, 116.","mla":"Koval, Nikita, et al. “CQS: A Formally-Verified Framework for Fair and Abortable Synchronization.” Proceedings of the ACM on Programming Languages, vol. 7, 116, Association for Computing Machinery, 2023, doi:10.1145/3591230."}},{"date_created":"2025-07-10T13:11:47Z","external_id":{"arxiv":["2108.02655"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","abstract":[{"text":"The sinkless orientation problem plays a key role in understanding the foundations of distributed computing. The problem can be used to separate two fundamental models of distributed graph algorithms, LOCAL and SLOCAL: the locality of sinkless orientation is Ω(log n) in the deterministic LOCAL model and O(log log n) in the deterministic SLOCAL model. Both of these results are known by prior work, but here we give new simple, self-contained proofs for them.","lang":"eng"}],"arxiv":1,"oa_version":"Preprint","publication_identifier":{"eisbn":["9781611977585"]},"day":"12","ec_funded":1,"acknowledgement":"We thank the anonymous reviewers for their helpful feedback on previous versions of this work. Parts ofthis work appeared in DISC 2021 as a brief announcement [ 21]. This work was supported in part by theEuropean Research Council (ERC) under the European Union’s Horizon 2020 research and innovationprogramme (grant agreement No 805223 ScaleML), the Academy of Finland (grant agreement No 333837),the Austrian Science Fund (FWF) and netIDEE (grant agreement No P 33775-N), and the AustrianScience Fund (FWF) project DELTA (grant agreement No I 5025-N).","date_updated":"2026-07-06T11:57:38Z","_id":"19983","page":"175-191","type":"book_chapter","OA_place":"repository","date_published":"2023-01-12T00:00:00Z","oa":1,"publication":"Symposium on Simplicity in Algorithms","publication_status":"published","citation":{"mla":"Balliu, Alkida, et al. “Sinkless Orientation Made Simple.” Symposium on Simplicity in Algorithms, Society for Industrial and Applied Mathematics, 2023, pp. 175–91, doi:10.1137/1.9781611977585.ch17.","ieee":"A. Balliu et al., “Sinkless Orientation Made Simple,” in Symposium on Simplicity in Algorithms, Society for Industrial and Applied Mathematics, 2023, pp. 175–191.","ista":"Balliu A, Korhonen J, Kuhn F, Lievonen H, Olivetti D, Pai S, Paz A, Rybicki J, Schmid S, Studený J, Suomela J, Uitto J. 2023.Sinkless Orientation Made Simple. In: Symposium on Simplicity in Algorithms. , 175–191.","apa":"Balliu, A., Korhonen, J., Kuhn, F., Lievonen, H., Olivetti, D., Pai, S., … Uitto, J. (2023). Sinkless Orientation Made Simple. In Symposium on Simplicity in Algorithms (pp. 175–191). Florence, Italy: Society for Industrial and Applied Mathematics. https://doi.org/10.1137/1.9781611977585.ch17","chicago":"Balliu, Alkida, Janne Korhonen, Fabian Kuhn, Henrik Lievonen, Dennis Olivetti, Shreyas Pai, Ami Paz, et al. “Sinkless Orientation Made Simple.” In Symposium on Simplicity in Algorithms, 175–91. Society for Industrial and Applied Mathematics, 2023. https://doi.org/10.1137/1.9781611977585.ch17.","short":"A. Balliu, J. Korhonen, F. Kuhn, H. Lievonen, D. Olivetti, S. Pai, A. Paz, J. Rybicki, S. Schmid, J. Studený, J. Suomela, J. Uitto, in:, Symposium on Simplicity in Algorithms, Society for Industrial and Applied Mathematics, 2023, pp. 175–191.","ama":"Balliu A, Korhonen J, Kuhn F, et al. Sinkless Orientation Made Simple. In: Symposium on Simplicity in Algorithms. Society for Industrial and Applied Mathematics; 2023:175-191. doi:10.1137/1.9781611977585.ch17"},"quality_controlled":"1","conference":{"start_date":"2023-01-23","location":"Florence, Italy","end_date":"2023-01-25","name":"SOSA: Symposium on Simplicity in Algorithms"},"status":"public","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2108.02655"}],"department":[{"_id":"DaAl"}],"doi":"10.1137/1.9781611977585.ch17","language":[{"iso":"eng"}],"title":"Sinkless Orientation Made Simple","month":"01","year":"2023","publisher":"Society for Industrial and Applied Mathematics","das_tickbox":"1","project":[{"grant_number":"805223","_id":"268A44D6-B435-11E9-9278-68D0E5697425","name":"Elastic Coordination for Scalable Machine Learning","call_identifier":"H2020"},{"grant_number":"P33775","_id":"bd9e3a2e-d553-11ed-ba76-8aa684ce17fe","name":"Fast Algorithms for a Reactive Network Layer"}],"OA_type":"green","author":[{"last_name":"Balliu","full_name":"Balliu, Alkida","first_name":"Alkida"},{"last_name":"Korhonen","id":"C5402D42-15BC-11E9-A202-CA2BE6697425","first_name":"Janne","full_name":"Korhonen, Janne"},{"full_name":"Kuhn, Fabian","first_name":"Fabian","last_name":"Kuhn"},{"last_name":"Lievonen","full_name":"Lievonen, Henrik","first_name":"Henrik"},{"last_name":"Olivetti","first_name":"Dennis","full_name":"Olivetti, Dennis"},{"first_name":"Shreyas","full_name":"Pai, Shreyas","last_name":"Pai"},{"first_name":"Ami","full_name":"Paz, Ami","last_name":"Paz"},{"last_name":"Rybicki","first_name":"Joel","id":"334EFD2E-F248-11E8-B48F-1D18A9856A87","full_name":"Rybicki, Joel","orcid":"0000-0002-6432-6646"},{"full_name":"Schmid, Stefan","first_name":"Stefan","last_name":"Schmid"},{"last_name":"Studený","first_name":"Jan","full_name":"Studený, Jan"},{"last_name":"Suomela","full_name":"Suomela, Jukka","first_name":"Jukka"},{"last_name":"Uitto","full_name":"Uitto, Jara","first_name":"Jara"}],"article_processing_charge":"No"},{"article_processing_charge":"Yes","author":[{"last_name":"Mathur","first_name":"Savita","full_name":"Mathur, Savita"},{"full_name":"Claytor, Zachary R.","first_name":"Zachary R.","last_name":"Claytor"},{"first_name":"Ângela R. G.","full_name":"Santos, Ângela R. G.","last_name":"Santos"},{"last_name":"García","first_name":"Rafael A.","full_name":"García, Rafael A."},{"last_name":"Amard","first_name":"Louis","full_name":"Amard, Louis"},{"full_name":"Bugnet, Lisa Annabelle","orcid":"0000-0003-0142-4000","first_name":"Lisa Annabelle","id":"d9edb345-f866-11ec-9b37-d119b5234501","last_name":"Bugnet"},{"full_name":"Corsaro, Enrico","first_name":"Enrico","last_name":"Corsaro"},{"last_name":"Bonanno","first_name":"Alfio","full_name":"Bonanno, Alfio"},{"full_name":"Breton, Sylvain N.","first_name":"Sylvain N.","last_name":"Breton"},{"last_name":"Godoy-Rivera","first_name":"Diego","full_name":"Godoy-Rivera, Diego"},{"full_name":"Pinsonneault, Marc H.","first_name":"Marc H.","last_name":"Pinsonneault"},{"full_name":"van Saders, Jennifer","first_name":"Jennifer","last_name":"van Saders"}],"issue":"2","volume":952,"das_tickbox":"1","publisher":"IOP Publishing","year":"2023","month":"08","keyword":["Space and Planetary Science","Astronomy and Astrophysics"],"has_accepted_license":"1","title":"Magnetic activity evolution of solar-like stars. I. Sph–age relation derived from Kepler observations","language":[{"iso":"eng"}],"department":[{"_id":"LiBu"}],"doi":"10.3847/1538-4357/acd118","status":"public","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"quality_controlled":"1","intvolume":" 952","citation":{"short":"S. Mathur, Z.R. Claytor, Â.R.G. Santos, R.A. García, L. Amard, L.A. Bugnet, E. Corsaro, A. Bonanno, S.N. Breton, D. Godoy-Rivera, M.H. Pinsonneault, J. van Saders, The Astrophysical Journal 952 (2023).","ama":"Mathur S, Claytor ZR, Santos ÂRG, et al. Magnetic activity evolution of solar-like stars. I. Sph–age relation derived from Kepler observations. The Astrophysical Journal. 2023;952(2). doi:10.3847/1538-4357/acd118","ista":"Mathur S, Claytor ZR, Santos ÂRG, García RA, Amard L, Bugnet LA, Corsaro E, Bonanno A, Breton SN, Godoy-Rivera D, Pinsonneault MH, van Saders J. 2023. Magnetic activity evolution of solar-like stars. I. Sph–age relation derived from Kepler observations. The Astrophysical Journal. 952(2), 131.","apa":"Mathur, S., Claytor, Z. R., Santos, Â. R. G., García, R. A., Amard, L., Bugnet, L. A., … van Saders, J. (2023). Magnetic activity evolution of solar-like stars. I. Sph–age relation derived from Kepler observations. The Astrophysical Journal. IOP Publishing. https://doi.org/10.3847/1538-4357/acd118","ieee":"S. Mathur et al., “Magnetic activity evolution of solar-like stars. I. Sph–age relation derived from Kepler observations,” The Astrophysical Journal, vol. 952, no. 2. IOP Publishing, 2023.","chicago":"Mathur, Savita, Zachary R. Claytor, Ângela R. G. Santos, Rafael A. García, Louis Amard, Lisa Annabelle Bugnet, Enrico Corsaro, et al. “Magnetic Activity Evolution of Solar-like Stars. I. Sph–Age Relation Derived from Kepler Observations.” The Astrophysical Journal. IOP Publishing, 2023. https://doi.org/10.3847/1538-4357/acd118.","mla":"Mathur, Savita, et al. “Magnetic Activity Evolution of Solar-like Stars. I. Sph–Age Relation Derived from Kepler Observations.” The Astrophysical Journal, vol. 952, no. 2, 131, IOP Publishing, 2023, doi:10.3847/1538-4357/acd118."},"isi":1,"publication_status":"published","publication":"The Astrophysical Journal","article_number":"131","oa":1,"date_published":"2023-08-01T00:00:00Z","type":"journal_article","_id":"13443","date_updated":"2026-07-06T12:20:17Z","file":[{"checksum":"f12452834d7ed6748dbf5ace18af4723","access_level":"open_access","date_created":"2023-08-02T07:42:26Z","relation":"main_file","file_name":"2023_AstrophysicalJour_Mathur.pdf","date_updated":"2023-08-02T07:42:26Z","success":1,"content_type":"application/pdf","file_id":"13448","creator":"dernst","file_size":4192386}],"file_date_updated":"2023-08-02T07:42:26Z","scopus_import":"1","acknowledgement":"This paper includes data collected by the Kepler mission and obtained from the MAST data archive at the Space Telescope Science Institute (STScI). Funding for the Kepler mission is provided by the NASA Science Mission Directorate. STScI is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5–26555. We acknowledge that this research was supported in part by the National Science Foundation under grant No. NSF PHY-1748958. S.M. acknowledges support from the Spanish Ministry of Science and Innovation (MICINN) with the Ramón y Cajal fellowship No. RYC-2015-17697, the grant No. PID2019-107061GB-C66, and through AEI under the Severo Ochoa Centres of Excellence Programme 2020–2023 (CEX2019-000920-S). S.M. and D.G.R. acknowledge support from the Spanish Ministry of Science and Innovation (MICINN) with the grant No. PID2019-107187GB-I00. Z.R.C. acknowledges support from National Aeronautics and Space Administration via the TESS Guest Investigator Program (grant No. 80NSSC18K18584). The work presented here was partially supported by the NASA grant NNX17AF27G. A.R.G.S. acknowledges the support by FCT through national funds and by FEDER through COMPETE2020 by the following grants: UIDB/04434/2020 and UIDP/04434/2020. A.R.G.S. is supported by FCT through the work contract No. 2020.02480.CEECIND/CP1631/CT0001. R.A.G., L.A., and S.N.B. acknowledge the support from PLATO and GOLF CNES grants. S.N.B. acknowledges support from PLATO ASI-INAF agreement No. 2015-019-R.1-2018.","publication_identifier":{"eissn":["1538-4357"],"issn":["0004-637X"]},"day":"01","oa_version":"Published Version","abstract":[{"lang":"eng","text":"The ages of solar-like stars have been at the center of many studies such as exoplanet characterization or Galactic-archeology. While ages are usually computed from stellar evolution models, relations linking ages to other stellar properties, such as rotation and magnetic activity, have been investigated. With the large catalog of 55,232 rotation periods, Prot, and photometric magnetic activity index, Sph from Kepler data, we have the opportunity to look for such magneto-gyro-chronology relations. Stellar ages are obtained with two stellar evolution codes that include treatment of angular momentum evolution, hence using Prot as input in addition to classical atmospheric parameters. We explore two different ways of predicting stellar ages on three subsamples with spectroscopic observations: solar analogs, late-F and G dwarfs, and K dwarfs. We first perform a Bayesian analysis to derive relations between Sph and ages between 1 and 5 Gyr, and other stellar properties. For late-F and G dwarfs, and K dwarfs, the multivariate regression favors the model with Prot and Sph with median differences of 0.1% and 0.2%, respectively. We also apply Machine Learning techniques with a Random Forest algorithm to predict ages up to 14 Gyr with the same set of input parameters. For late-F, G and K dwarfs together, predicted ages are on average within 5.3% of the model ages and improve to 3.1% when including Prot. These are very promising results for a quick age estimation for solar-like stars with photometric observations, especially with current and future space missions."}],"article_type":"original","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2023-08-01T14:19:16Z","external_id":{"isi":["001034185700001"]},"ddc":["520"]},{"has_accepted_license":"1","language":[{"iso":"eng"}],"title":"Nanoparticle-based semiconductor solids: From synthesis to consolidation","month":"04","status":"public","department":[{"_id":"GradSch"},{"_id":"MaIb"}],"doi":"10.15479/at:ista:12885","project":[{"_id":"2564DBCA-B435-11E9-9278-68D0E5697425","grant_number":"665385","name":"International IST Doctoral Program","call_identifier":"H2020"}],"year":"2023","publisher":"Institute of Science and Technology Austria","acknowledged_ssus":[{"_id":"EM-Fac"},{"_id":"NanoFab"}],"author":[{"first_name":"Mariano","id":"45D7531A-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-4566-5877","full_name":"Calcabrini, Mariano","last_name":"Calcabrini"}],"article_processing_charge":"No","oa_version":"Published Version","day":"28","publication_identifier":{"issn":["2663-337X"],"isbn":["978-3-99078-028-2"]},"date_created":"2023-05-02T07:58:57Z","ddc":["546","541"],"abstract":[{"lang":"eng","text":"High-performance semiconductors rely upon precise control of heat and charge transport. This can be achieved by precisely engineering defects in polycrystalline solids. There are multiple approaches to preparing such polycrystalline semiconductors, and the transformation of solution-processed colloidal nanoparticles is appealing because colloidal nanoparticles combine low cost with structural and compositional tunability along with rich surface chemistry. However, the multiple processes from nanoparticle synthesis to the final bulk nanocomposites are very complex. They involve nanoparticle purification, post-synthetic modifications, and finally consolidation (thermal treatments and densification). All these properties dictate the final material’s composition and microstructure, ultimately affecting its functional properties. This thesis explores the synthesis, surface chemistry and consolidation of colloidal semiconductor nanoparticles into dense solids. In particular, the transformations that take place during these processes, and their effect on the material’s transport properties are evaluated. 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Nanoparticle-Based Semiconductor Solids: From Synthesis to Consolidation. Institute of Science and Technology Austria, 2023, doi:10.15479/at:ista:12885.","ieee":"M. Calcabrini, “Nanoparticle-based semiconductor solids: From synthesis to consolidation,” Institute of Science and Technology Austria, 2023.","apa":"Calcabrini, M. (2023). Nanoparticle-based semiconductor solids: From synthesis to consolidation. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:12885","ista":"Calcabrini M. 2023. Nanoparticle-based semiconductor solids: From synthesis to consolidation. Institute of Science and Technology Austria.","chicago":"Calcabrini, Mariano. “Nanoparticle-Based Semiconductor Solids: From Synthesis to Consolidation.” Institute of Science and Technology Austria, 2023. https://doi.org/10.15479/at:ista:12885.","short":"M. Calcabrini, Nanoparticle-Based Semiconductor Solids: From Synthesis to Consolidation, Institute of Science and Technology Austria, 2023.","ama":"Calcabrini M. Nanoparticle-based semiconductor solids: From synthesis to consolidation. 2023. doi:10.15479/at:ista:12885"},"alternative_title":["ISTA Thesis"]},{"publication":"Cell Reports","article_number":"113162","publication_status":"published","type":"journal_article","pmid":1,"date_published":"2023-10-31T00:00:00Z","oa":1,"tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"quality_controlled":"1","citation":{"chicago":"Lombardi, Fabrizio, Hans J. Herrmann, Liborio Parrino, Dietmar Plenz, Silvia Scarpetta, Anna Elisabetta Vaudano, Lucilla De Arcangelis, and Oren Shriki. “Beyond Pulsed Inhibition: Alpha Oscillations Modulate Attenuation and Amplification of Neural Activity in the Awake Resting State.” Cell Reports. Elsevier, 2023. https://doi.org/10.1016/j.celrep.2023.113162.","ista":"Lombardi F, Herrmann HJ, Parrino L, Plenz D, Scarpetta S, Vaudano AE, De Arcangelis L, Shriki O. 2023. Beyond pulsed inhibition: Alpha oscillations modulate attenuation and amplification of neural activity in the awake resting state. Cell Reports. 42(10), 113162.","apa":"Lombardi, F., Herrmann, H. J., Parrino, L., Plenz, D., Scarpetta, S., Vaudano, A. E., … Shriki, O. (2023). Beyond pulsed inhibition: Alpha oscillations modulate attenuation and amplification of neural activity in the awake resting state. Cell Reports. Elsevier. https://doi.org/10.1016/j.celrep.2023.113162","ieee":"F. Lombardi et al., “Beyond pulsed inhibition: Alpha oscillations modulate attenuation and amplification of neural activity in the awake resting state,” Cell Reports, vol. 42, no. 10. Elsevier, 2023.","mla":"Lombardi, Fabrizio, et al. “Beyond Pulsed Inhibition: Alpha Oscillations Modulate Attenuation and Amplification of Neural Activity in the Awake Resting State.” Cell Reports, vol. 42, no. 10, 113162, Elsevier, 2023, doi:10.1016/j.celrep.2023.113162.","ama":"Lombardi F, Herrmann HJ, Parrino L, et al. Beyond pulsed inhibition: Alpha oscillations modulate attenuation and amplification of neural activity in the awake resting state. Cell Reports. 2023;42(10). doi:10.1016/j.celrep.2023.113162","short":"F. Lombardi, H.J. Herrmann, L. Parrino, D. Plenz, S. Scarpetta, A.E. Vaudano, L. De Arcangelis, O. Shriki, Cell Reports 42 (2023)."},"isi":1,"corr_author":"1","intvolume":" 42","oa_version":"Published Version","publication_identifier":{"eissn":["2211-1247"]},"day":"31","ddc":["570"],"date_created":"2023-10-08T22:01:15Z","external_id":{"isi":["001086695500001"],"pmid":["37777965"]},"article_type":"original","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","abstract":[{"text":"Alpha oscillations are a distinctive feature of the awake resting state of the human brain. However, their functional role in resting-state neuronal dynamics remains poorly understood. Here we show that, during resting wakefulness, alpha oscillations drive an alternation of attenuation and amplification bouts in neural activity. Our analysis indicates that inhibition is activated in pulses that last for a single alpha cycle and gradually suppress neural activity, while excitation is successively enhanced over a few alpha cycles to amplify neural activity. Furthermore, we show that long-term alpha amplitude fluctuations—the “waxing and waning” phenomenon—are an attenuation-amplification mechanism described by a power-law decay of the activity rate in the “waning” phase. Importantly, we do not observe such dynamics during non-rapid eye movement (NREM) sleep with marginal alpha oscillations. The results suggest that alpha oscillations modulate neural activity not only through pulses of inhibition (pulsed inhibition hypothesis) but also by timely enhancement of excitation (or disinhibition).","lang":"eng"}],"date_updated":"2026-07-06T12:48:55Z","file":[{"relation":"main_file","file_name":"2023_CellReports_Lombardi.pdf","date_created":"2024-01-30T14:07:08Z","access_level":"open_access","checksum":"9c71eb2a03aa160415f01ad95f49ceb5","file_size":5599007,"creator":"dernst","file_id":"14914","content_type":"application/pdf","date_updated":"2024-01-30T14:07:08Z","success":1}],"file_date_updated":"2024-01-30T14:07:08Z","_id":"14402","acknowledgement":"This research was funded in whole or in part by the Austrian Science Fund (FWF) (grant PT1013M03318 to F.L.). For the purpose of open access, the author has applied a CC BY public copyright license to any Author Accepted Manuscript version arising from this submission. The study was supported by the European Union Horizon 2020 Research and Innovation Program under the Marie Sklodowska-Curie action (grant agreement 754411 to F.L.) and in part by the NextGenerationEU through the grant TAlent in ReSearch@University of Padua – STARS@UNIPD (to F.L.) (project BRAINCIP [brain criticality and information processing]). L.d.A. acknowledges support from the Italian MIUR project PRIN2017WZFTZP and partial support from NEXTGENERATIONEU (NGEU) funded by the Ministry of University and Research (MUR), National Recovery and Resilience Plan (NRRP), and project MNESYS (PE0000006)—a multiscale integrated approach to the study of the nervous system in health and disease (DN. 1553 11.10.2022). O.S. acknowledges support from the Israel Science Foundation, grant 504/17. The work was supported in part by DIRP ZIAMH02797 (to D.P.).","related_material":{"record":[{"relation":"earlier_version","id":"10821","status":"public"}]},"ec_funded":1,"scopus_import":"1","author":[{"orcid":"0000-0003-2623-5249","full_name":"Lombardi, Fabrizio","first_name":"Fabrizio","id":"A057D288-3E88-11E9-986D-0CF4E5697425","last_name":"Lombardi"},{"last_name":"Herrmann","first_name":"Hans J.","full_name":"Herrmann, Hans J."},{"full_name":"Parrino, Liborio","first_name":"Liborio","last_name":"Parrino"},{"last_name":"Plenz","first_name":"Dietmar","full_name":"Plenz, Dietmar"},{"first_name":"Silvia","full_name":"Scarpetta, Silvia","last_name":"Scarpetta"},{"first_name":"Anna Elisabetta","full_name":"Vaudano, Anna Elisabetta","last_name":"Vaudano"},{"full_name":"De Arcangelis, Lucilla","first_name":"Lucilla","last_name":"De Arcangelis"},{"last_name":"Shriki","first_name":"Oren","full_name":"Shriki, Oren"}],"article_processing_charge":"Yes","issue":"10","title":"Beyond pulsed inhibition: Alpha oscillations modulate attenuation and amplification of neural activity in the awake resting state","language":[{"iso":"eng"}],"has_accepted_license":"1","month":"10","status":"public","department":[{"_id":"GaTk"}],"doi":"10.1016/j.celrep.2023.113162","volume":42,"project":[{"_id":"eb943429-77a9-11ec-83b8-9f471cdf5c67","grant_number":"M03318","name":"Functional Advantages of Critical Brain Dynamics"},{"call_identifier":"H2020","name":"ISTplus - Postdoctoral Fellowships","_id":"260C2330-B435-11E9-9278-68D0E5697425","grant_number":"754411"}],"publisher":"Elsevier","year":"2023"},{"author":[{"orcid":"0000-0002-2340-7431","full_name":"Velicky, Philipp","first_name":"Philipp","id":"39BDC62C-F248-11E8-B48F-1D18A9856A87","last_name":"Velicky"},{"last_name":"Miguel Villalba","id":"3FB91342-F248-11E8-B48F-1D18A9856A87","first_name":"Eder","orcid":"0000-0001-5665-0430","full_name":"Miguel Villalba, Eder"},{"orcid":"0000-0003-3862-1235","full_name":"Michalska, Julia M","id":"443DB6DE-F248-11E8-B48F-1D18A9856A87","first_name":"Julia M","last_name":"Michalska"},{"full_name":"Lyudchik, Julia","first_name":"Julia","id":"46E28B80-F248-11E8-B48F-1D18A9856A87","last_name":"Lyudchik"},{"last_name":"Wei","full_name":"Wei, Donglai","first_name":"Donglai"},{"first_name":"Zudi","full_name":"Lin, Zudi","last_name":"Lin"},{"orcid":"0000-0002-8698-3823","full_name":"Watson, Jake","first_name":"Jake","id":"63836096-4690-11EA-BD4E-32803DDC885E","last_name":"Watson"},{"full_name":"Troidl, Jakob","first_name":"Jakob","last_name":"Troidl"},{"last_name":"Beyer","full_name":"Beyer, Johanna","first_name":"Johanna"},{"id":"43DF3136-F248-11E8-B48F-1D18A9856A87","first_name":"Yoav","full_name":"Ben Simon, Yoav","last_name":"Ben Simon"},{"orcid":"0000-0003-1216-9105","full_name":"Sommer, Christoph M","first_name":"Christoph 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Bernd","orcid":"0000-0001-6511-9385","id":"49876194-F248-11E8-B48F-1D18A9856A87","first_name":"Bernd"},{"last_name":"Danzl","first_name":"Johann G","id":"42EFD3B6-F248-11E8-B48F-1D18A9856A87","full_name":"Danzl, Johann G","orcid":"0000-0001-8559-3973"}],"article_processing_charge":"Yes (in subscription journal)","OA_type":"hybrid","acknowledged_ssus":[{"_id":"ScienComp"},{"_id":"Bio"},{"_id":"PreCl"},{"_id":"E-Lib"},{"_id":"LifeSc"},{"_id":"M-Shop"}],"volume":20,"project":[{"grant_number":"I03600","_id":"265CB4D0-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","name":"Optical control of synaptic function via adhesion molecules"},{"call_identifier":"FWF","name":"Molecular Drug Targets","_id":"2548AE96-B435-11E9-9278-68D0E5697425","grant_number":"W1232"},{"name":"Synaptic communication in neuronal microcircuits","call_identifier":"FWF","_id":"25C5A090-B435-11E9-9278-68D0E5697425","grant_number":"Z00312"},{"name":"High content imaging to decode human immune cell interactions in health and allergic disease","grant_number":"LS18-022","_id":"23889792-32DE-11EA-91FC-C7463DDC885E"},{"_id":"2564DBCA-B435-11E9-9278-68D0E5697425","grant_number":"665385","call_identifier":"H2020","name":"International IST Doctoral Program"},{"_id":"24F9549A-B435-11E9-9278-68D0E5697425","grant_number":"715767","name":"MATERIALIZABLE: Intelligent fabrication-oriented Computational Design and Modeling","call_identifier":"H2020"},{"call_identifier":"H2020","name":"Probing the Reversibility of Autism Spectrum Disorders by Employing in vivo and in vitro Models","_id":"25444568-B435-11E9-9278-68D0E5697425","grant_number":"715508"},{"name":"Biophysics and circuit function of a giant cortical glutamatergic synapse","call_identifier":"H2020","grant_number":"692692","_id":"25B7EB9E-B435-11E9-9278-68D0E5697425"},{"_id":"fc2be41b-9c52-11eb-aca3-faa90aa144e9","grant_number":"101026635","name":"Synaptic computations of the hippocampal CA3 circuitry","call_identifier":"H2020"},{"grant_number":"LT00057","_id":"2668BFA0-B435-11E9-9278-68D0E5697425","name":"High-speed 3D-nanoscopy to study the role of adhesion during 3D cell migration"}],"year":"2023","publisher":"Springer Nature","title":"Dense 4D nanoscale reconstruction of living brain tissue","language":[{"iso":"eng"}],"has_accepted_license":"1","month":"08","status":"public","department":[{"_id":"PeJo"},{"_id":"GaNo"},{"_id":"BeBi"},{"_id":"JoDa"},{"_id":"Bio"}],"doi":"10.1038/s41592-023-01936-6","quality_controlled":"1","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"isi":1,"citation":{"short":"P. Velicky, E. Miguel Villalba, J.M. Michalska, J. Lyudchik, D. Wei, Z. Lin, J. Watson, J. Troidl, J. Beyer, Y. Ben Simon, C.M. Sommer, W. Jahr, A. Cenameri, J. Broichhagen, S.G.N. Grant, P.M. Jonas, G. Novarino, H. Pfister, B. Bickel, J.G. Danzl, Nature Methods 20 (2023) 1256–1265.","ama":"Velicky P, Miguel Villalba E, Michalska JM, et al. Dense 4D nanoscale reconstruction of living brain tissue. Nature Methods. 2023;20:1256-1265. doi:10.1038/s41592-023-01936-6","apa":"Velicky, P., Miguel Villalba, E., Michalska, J. M., Lyudchik, J., Wei, D., Lin, Z., … Danzl, J. G. (2023). Dense 4D nanoscale reconstruction of living brain tissue. Nature Methods. Springer Nature. https://doi.org/10.1038/s41592-023-01936-6","ieee":"P. Velicky et al., “Dense 4D nanoscale reconstruction of living brain tissue,” Nature Methods, vol. 20. Springer Nature, pp. 1256–1265, 2023.","ista":"Velicky P, Miguel Villalba E, Michalska JM, Lyudchik J, Wei D, Lin Z, Watson J, Troidl J, Beyer J, Ben Simon Y, Sommer CM, Jahr W, Cenameri A, Broichhagen J, Grant SGN, Jonas PM, Novarino G, Pfister H, Bickel B, Danzl JG. 2023. Dense 4D nanoscale reconstruction of living brain tissue. Nature Methods. 20, 1256–1265.","chicago":"Velicky, Philipp, Eder Miguel Villalba, Julia M Michalska, Julia Lyudchik, Donglai Wei, Zudi Lin, Jake Watson, et al. “Dense 4D Nanoscale Reconstruction of Living Brain Tissue.” Nature Methods. Springer Nature, 2023. https://doi.org/10.1038/s41592-023-01936-6.","mla":"Velicky, Philipp, et al. “Dense 4D Nanoscale Reconstruction of Living Brain Tissue.” Nature Methods, vol. 20, Springer Nature, 2023, pp. 1256–65, doi:10.1038/s41592-023-01936-6."},"corr_author":"1","intvolume":" 20","publication":"Nature Methods","publication_status":"published","type":"journal_article","page":"1256-1265","pmid":1,"OA_place":"publisher","date_published":"2023-08-01T00:00:00Z","oa":1,"file":[{"date_created":"2025-02-26T08:01:57Z","relation":"main_file","file_name":"2023_NatureMethods_Velicky.pdf","access_level":"open_access","checksum":"a68e845780a82ea36d0d4d3212a87c10","creator":"dernst","file_size":14103039,"date_updated":"2025-02-26T08:01:57Z","content_type":"application/pdf","success":1,"file_id":"19088"}],"file_date_updated":"2025-02-26T08:01:57Z","date_updated":"2026-07-06T12:49:46Z","_id":"13267","related_material":{"link":[{"relation":"software","url":"https://github.com/danzllab/LIONESS"}],"record":[{"relation":"research_data","id":"12817","status":"public"},{"id":"14770","relation":"shorter_version","status":"public"},{"status":"public","relation":"dissertation_contains","id":"18674"},{"status":"public","id":"11943","relation":"earlier_version"}]},"ec_funded":1,"acknowledgement":"We thank J. Vorlaufer, N. Agudelo and A. Wartak for microscope maintenance and troubleshooting, C. Kreuzinger and A. Freeman for technical assistance, M. Šuplata for hardware control support and M. Cunha dos Santos for initial exploration of software. We\r\nthank P. Henderson for advice on deep-learning training and M. Sixt, S. Boyd and T. Weiss for discussions and critical reading of the manuscript. L. Lavis (Janelia Research Campus) generously provided the JF585-HaloTag ligand. We acknowledge expert support by IST\r\nAustria’s scientific computing, imaging and optics, preclinical, library and laboratory support facilities and by the Miba machine shop. We gratefully acknowledge funding by the following sources: Austrian Science Fund (F.W.F.) grant no. I3600-B27 (J.G.D.), grant no. DK W1232\r\n(J.G.D. and J.M.M.) and grant no. Z 312-B27, Wittgenstein award (P.J.); the Gesellschaft für Forschungsförderung NÖ grant no. LSC18-022 (J.G.D.); an ISTA Interdisciplinary project grant (J.G.D. and B.B.); the European Union’s Horizon 2020 research and innovation programme,\r\nMarie-Skłodowska Curie grant 665385 (J.M.M. and J.L.); the European Union’s Horizon 2020 research and innovation programme, European Research Council grant no. 715767, MATERIALIZABLE (B.B.); grant no. 715508, REVERSEAUTISM (G.N.); grant no. 695568, SYNNOVATE (S.G.N.G.); and grant no. 692692, GIANTSYN (P.J.); the Simons\r\nFoundation Autism Research Initiative grant no. 529085 (S.G.N.G.); the Wellcome Trust Technology Development grant no. 202932 (S.G.N.G.); the Marie Skłodowska-Curie Actions Individual Fellowship no. 101026635 under the EU Horizon 2020 program (J.F.W.);\r\nthe Human Frontier Science Program postdoctoral fellowship LT000557/2018 (W.J.); and the National Science Foundation grant no. IIS-1835231 (H.P.) and NCS-FO-2124179 (H.P.).","scopus_import":"1","oa_version":"Published Version","day":"01","publication_identifier":{"issn":["1548-7091"],"eissn":["1548-7105"]},"ddc":["570"],"external_id":{"isi":["001025621500001"],"pmid":["37429995"]},"date_created":"2023-07-23T22:01:13Z","article_type":"original","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","abstract":[{"lang":"eng","text":"Three-dimensional (3D) reconstruction of living brain tissue down to an individual synapse level would create opportunities for decoding the dynamics and structure–function relationships of the brain’s complex and dense information processing network; however, this has been hindered by insufficient 3D resolution, inadequate signal-to-noise ratio and prohibitive light burden in optical imaging, whereas electron microscopy is inherently static. Here we solved these challenges by developing an integrated optical/machine-learning technology, LIONESS (live information-optimized nanoscopy enabling saturated segmentation). This leverages optical modifications to stimulated emission depletion microscopy in comprehensively, extracellularly labeled tissue and previous information on sample structure via machine learning to simultaneously achieve isotropic super-resolution, high signal-to-noise ratio and compatibility with living tissue. This allows dense deep-learning-based instance segmentation and 3D reconstruction at a synapse level, incorporating molecular, activity and morphodynamic information. LIONESS opens up avenues for studying the dynamic functional (nano-)architecture of living brain tissue."}]},{"file":[{"file_id":"14503","success":1,"content_type":"application/zip","date_updated":"2023-11-08T20:23:07Z","creator":"fschur","file_size":347641117,"checksum":"a8b9adeb53a4109dea4d5e39fa1acccf","access_level":"open_access","relation":"main_file","file_name":"Computational_Toolbox_v1.2.zip","date_created":"2023-11-08T20:23:07Z"},{"date_updated":"2023-11-21T08:20:23Z","success":1,"content_type":"text/plain","file_id":"14586","file_size":1522,"creator":"dernst","access_level":"open_access","checksum":"14db2addbfca61a085ba301ed6f2900b","date_created":"2023-11-21T08:20:23Z","file_name":"Readme.txt","relation":"main_file"}],"date_updated":"2026-07-06T12:57:43Z","file_date_updated":"2023-11-21T08:20:23Z","_id":"14502","project":[{"name":"Structure and isoform diversity of the Arp2/3 complex","grant_number":"P33367","_id":"9B954C5C-BA93-11EA-9121-9846C619BF3A"}],"license":"https://choosealicense.com/licenses/agpl-3.0/","publisher":"Institute of Science and Technology Austria","year":"2023","related_material":{"record":[{"status":"public","id":"10290","relation":"used_for_analysis_in"}]},"title":"Computational toolbox for ultrastructural quantitative analysis of filament networks in cryo-ET data","keyword":["cryo-electron tomography","actin cytoskeleton","toolbox"],"has_accepted_license":"1","month":"11","day":"21","ddc":["570"],"date_created":"2023-11-08T19:40:54Z","status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","abstract":[{"lang":"eng","text":"A precise quantitative description of the ultrastructural characteristics underlying biological mechanisms is often key to their understanding. This is particularly true for dynamic extra- and intracellular filamentous assemblies, playing a role in cell motility, cell integrity, cytokinesis, tissue formation and maintenance. For example, genetic manipulation or modulation of actin regulatory proteins frequently manifests in changes of the morphology, dynamics, and ultrastructural architecture of actin filament-rich cell peripheral structures, such as lamellipodia or filopodia. However, the observed ultrastructural effects often remain subtle and require sufficiently large datasets for appropriate quantitative analysis. The acquisition of such large datasets has been enabled by recent advances in high-throughput cryo-electron tomography (cryo-ET) methods. This also necessitates the development of complementary approaches to maximize the extraction of relevant biological information. We have developed a computational toolbox for the semi-automatic quantification of segmented and vectorized fila- mentous networks from pre-processed cryo-electron tomograms, facilitating the analysis and cross-comparison of multiple experimental conditions. GUI-based components simplify the processing of data and allow users to obtain a large number of ultrastructural parameters describing filamentous assemblies. We demonstrate the feasibility of this workflow by analyzing cryo-ET data of untreated and chemically perturbed branched actin filament networks and that of parallel actin filament arrays. In principle, the computational toolbox presented here is applicable for data analysis comprising any type of filaments in regular (i.e. parallel) or random arrangement. We show that it can ease the identification of key differences between experimental groups and facilitate the in-depth analysis of ultrastructural data in a time-efficient manner."}],"department":[{"_id":"FlSc"}],"doi":"10.15479/AT:ISTA:14502","author":[{"last_name":"Dimchev","id":"38C393BE-F248-11E8-B48F-1D18A9856A87","first_name":"Georgi A","full_name":"Dimchev, Georgi A","orcid":"0000-0001-8370-6161"},{"last_name":"Amiri","full_name":"Amiri, Behnam","first_name":"Behnam"},{"orcid":"0000-0001-7149-769X","full_name":"Fäßler, Florian","id":"404F5528-F248-11E8-B48F-1D18A9856A87","first_name":"Florian","last_name":"Fäßler"},{"last_name":"Falcke","first_name":"Martin","full_name":"Falcke, Martin"},{"full_name":"Schur, Florian KM","orcid":"0000-0003-4790-8078","first_name":"Florian KM","id":"48AD8942-F248-11E8-B48F-1D18A9856A87","last_name":"Schur"}],"tmp":{"name":"GNU Affero General Public License v3.0","short":"GNU AGPLv3 ","legal_code_url":"https://www.gnu.org/licenses/agpl-3.0.html"},"citation":{"short":"G.A. Dimchev, B. Amiri, F. Fäßler, M. Falcke, F.K. Schur, (2023).","ama":"Dimchev GA, Amiri B, Fäßler F, Falcke M, Schur FK. Computational toolbox for ultrastructural quantitative analysis of filament networks in cryo-ET data. 2023. doi:10.15479/AT:ISTA:14502","ieee":"G. A. Dimchev, B. Amiri, F. Fäßler, M. Falcke, and F. K. Schur, “Computational toolbox for ultrastructural quantitative analysis of filament networks in cryo-ET data.” Institute of Science and Technology Austria, 2023.","apa":"Dimchev, G. A., Amiri, B., Fäßler, F., Falcke, M., & Schur, F. K. (2023). Computational toolbox for ultrastructural quantitative analysis of filament networks in cryo-ET data. Institute of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:14502","ista":"Dimchev GA, Amiri B, Fäßler F, Falcke M, Schur FK. 2023. Computational toolbox for ultrastructural quantitative analysis of filament networks in cryo-ET data, Institute of Science and Technology Austria, 10.15479/AT:ISTA:14502.","chicago":"Dimchev, Georgi A, Behnam Amiri, Florian Fäßler, Martin Falcke, and Florian KM Schur. “Computational Toolbox for Ultrastructural Quantitative Analysis of Filament Networks in Cryo-ET Data.” Institute of Science and Technology Austria, 2023. https://doi.org/10.15479/AT:ISTA:14502.","mla":"Dimchev, Georgi A., et al. Computational Toolbox for Ultrastructural Quantitative Analysis of Filament Networks in Cryo-ET Data. Institute of Science and Technology Austria, 2023, doi:10.15479/AT:ISTA:14502."},"corr_author":"1","type":"software","date_published":"2023-11-21T00:00:00Z","oa":1},{"issue":"7","author":[{"id":"83c96512-15b2-11ec-abd3-b7eede36184f","first_name":"Huihuang","full_name":"Chen, Huihuang","last_name":"Chen"},{"id":"367EF8FA-F248-11E8-B48F-1D18A9856A87","first_name":"Lanxin","orcid":"0000-0002-5607-272X","full_name":"Li, Lanxin","last_name":"Li"},{"last_name":"Zou","full_name":"Zou, Minxia","id":"5c243f41-03f3-11ec-841c-96faf48a7ef9","first_name":"Minxia"},{"first_name":"Linlin","id":"44B04502-A9ED-11E9-B6FC-583AE6697425","orcid":"0000-0001-5187-8401","full_name":"Qi, Linlin","last_name":"Qi"},{"full_name":"Friml, Jiří","orcid":"0000-0002-8302-7596","id":"4159519E-F248-11E8-B48F-1D18A9856A87","first_name":"Jiří","last_name":"Friml"}],"article_processing_charge":"Yes (via OA deal)","acknowledged_ssus":[{"_id":"LifeSc"},{"_id":"Bio"}],"publisher":"Elsevier","year":"2023","das_tickbox":"1","volume":16,"project":[{"name":"Tracing Evolution of Auxin Transport and Polarity in Plants","call_identifier":"H2020","_id":"261099A6-B435-11E9-9278-68D0E5697425","grant_number":"742985"}],"status":"public","department":[{"_id":"JiFr"}],"doi":"10.1016/j.molp.2023.06.007","language":[{"iso":"eng"}],"title":"Distinct functions of TIR1 and AFB1 receptors in auxin signalling.","has_accepted_license":"1","month":"07","citation":{"ieee":"H. Chen, L. Li, M. Zou, L. Qi, and J. Friml, “Distinct functions of TIR1 and AFB1 receptors in auxin signalling.,” Molecular Plant, vol. 16, no. 7. Elsevier, pp. 1117–1119, 2023.","apa":"Chen, H., Li, L., Zou, M., Qi, L., & Friml, J. (2023). Distinct functions of TIR1 and AFB1 receptors in auxin signalling. Molecular Plant. Elsevier. https://doi.org/10.1016/j.molp.2023.06.007","ista":"Chen H, Li L, Zou M, Qi L, Friml J. 2023. Distinct functions of TIR1 and AFB1 receptors in auxin signalling. Molecular Plant. 16(7), 1117–1119.","chicago":"Chen, Huihuang, Lanxin Li, Minxia Zou, Linlin Qi, and Jiří Friml. “Distinct Functions of TIR1 and AFB1 Receptors in Auxin Signalling.” Molecular Plant. Elsevier, 2023. https://doi.org/10.1016/j.molp.2023.06.007.","mla":"Chen, Huihuang, et al. “Distinct Functions of TIR1 and AFB1 Receptors in Auxin Signalling.” Molecular Plant, vol. 16, no. 7, Elsevier, 2023, pp. 1117–19, doi:10.1016/j.molp.2023.06.007.","short":"H. Chen, L. Li, M. Zou, L. Qi, J. Friml, Molecular Plant 16 (2023) 1117–1119.","ama":"Chen H, Li L, Zou M, Qi L, Friml J. Distinct functions of TIR1 and AFB1 receptors in auxin signalling. Molecular Plant. 2023;16(7):1117-1119. doi:10.1016/j.molp.2023.06.007"},"isi":1,"corr_author":"1","intvolume":" 16","tmp":{"image":"/images/cc_by_nc_nd.png","short":"CC BY-NC-ND (4.0)","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode"},"quality_controlled":"1","page":"1117-1119","type":"journal_article","pmid":1,"date_published":"2023-07-01T00:00:00Z","oa":1,"publication":"Molecular Plant","publication_status":"published","related_material":{"record":[{"relation":"dissertation_contains","id":"19478","status":"public"}]},"acknowledgement":"We thank all the authors for sharing the published materials. This research was supported by the Lab Support Facility and the Imaging and Optics Facility of ISTA. We thank Lukáš Fiedler (ISTA) for critical reading of the manuscript. This project was funded by the European Research Council Advanced Grant (ETAP-742985).","ec_funded":1,"scopus_import":"1","file":[{"checksum":"6012b7e4a2f680ee6c1f84001e2b945f","access_level":"open_access","file_name":"2023_MolecularPlant_Chen.pdf","relation":"main_file","date_created":"2024-01-29T10:37:05Z","file_id":"14894","content_type":"application/pdf","success":1,"date_updated":"2024-01-29T10:37:05Z","file_size":1000871,"creator":"dernst"}],"date_updated":"2026-07-06T12:58:58Z","file_date_updated":"2024-01-29T10:37:05Z","_id":"13212","ddc":["580"],"date_created":"2023-07-12T07:32:46Z","external_id":{"pmid":["37393433"],"isi":["001044410900001"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_type":"letter_note","abstract":[{"lang":"eng","text":"Auxin is the major plant hormone regulating growth and development (Friml, 2022). Forward genetic approaches in the model plant Arabidopsis thaliana have identified major components of auxin signalling and established the canonical mechanism mediating transcriptional and thus developmental reprogramming. In this textbook view, TRANSPORT INHIBITOR RESPONSE 1 (TIR1)/AUXIN-SIGNALING F-BOX (AFBs) are auxin receptors, which act as F-box subunits determining the substrate specificity of the Skp1-Cullin1-F box protein (SCF) type E3 ubiquitin ligase complex. Auxin acts as a “molecular glue” increasing the affinity between TIR1/AFBs and the Aux/IAA repressors. Subsequently, Aux/IAAs are ubiquitinated and degraded, thus releasing auxin transcription factors from their repression making them free to mediate transcription of auxin response genes (Yu et al., 2022). Nonetheless, accumulating evidence suggests existence of rapid, non-transcriptional responses downstream of TIR1/AFBs such as auxin-induced cytosolic calcium (Ca2+) transients, plasma membrane depolarization and apoplast alkalinisation, all converging on the process of root growth inhibition and root gravitropism (Li et al., 2022). Particularly, these rapid responses are mostly contributed by predominantly cytosolic AFB1, while the long-term growth responses are mediated by mainly nuclear TIR1 and AFB2-AFB5 (Li et al., 2021; Prigge et al., 2020; Serre et al., 2021). How AFB1 conducts auxin-triggered rapid responses and how it is different from TIR1 and AFB2-AFB5 remains elusive. Here, we compare the roles of TIR1 and AFB1 in transcriptional and rapid responses by modulating their subcellular localization in Arabidopsis and by testing their ability to mediate transcriptional responses when part of the minimal auxin circuit reconstituted in yeast."}],"oa_version":"Published Version","day":"01","publication_identifier":{"eissn":["1674-2052"],"issn":["1752-9867"]}},{"abstract":[{"text":"The phytohormone auxin plays central roles in many growth and developmental processes in plants. Development of chemical tools targeting the auxin pathway is useful for both plant biology and agriculture. Here we reveal that naproxen, a synthetic compound with anti-inflammatory activity in humans, acts as an auxin transport inhibitor targeting PIN-FORMED (PIN) transporters in plants. Physiological experiments indicate that exogenous naproxen treatment affects pleiotropic auxin-regulated developmental processes. Additional cellular and biochemical evidence indicates that naproxen suppresses auxin transport, specifically PIN-mediated auxin efflux. Moreover, biochemical and structural analyses confirm that naproxen binds directly to PIN1 protein via the same binding cavity as the indole-3-acetic acid substrate. Thus, by combining cellular, biochemical, and structural approaches, this study clearly establishes that naproxen is a PIN inhibitor and elucidates the underlying mechanisms. Further use of this compound may advance our understanding of the molecular mechanisms of PIN-mediated auxin transport and expand our toolkit in auxin biology and agriculture.","lang":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_type":"original","date_created":"2023-07-12T07:32:00Z","external_id":{"isi":["001113003000001"],"pmid":["37254481"]},"ddc":["580"],"publication_identifier":{"eissn":["2590-3462"]},"day":"13","oa_version":"Published Version","scopus_import":"1","acknowledgement":"This work was supported by the Strategic Priority Research Program of the Chinese Academy of Sciences (XDB37020103 to Linfeng Sun); research funds from the Center for Advanced Interdisciplinary Science\r\nand Biomedicine of IHM, Division of Life Sciences and Medicine, University of Science and Technology of China (QYPY20220012 to S.T.); start-up funding from the University of Science and Technology of China and the\r\nChinese Academy of Sciences (GG9100007007, KY9100000026,KY9100000051, and KJ2070000079 to S.T.); the National Natural Science Foundation of China (31900885 to X.L. and 31870732 to Linfeng Sun); the Natural Science Foundation of Anhui Province (2008085MC90 to X.L. and 2008085J15 to Linfeng Sun); the Fundamental Research Funds for the Central Universities (WK9100000021 to S.T. and WK9100000031 to Linfeng Sun); and the USTC Research Funds of the Double First-Class Initiative (YD9100002016 to S.T. and YD9100002004 to Linfeng Sun). Linfeng Sun is supported by an Outstanding Young Scholar Award from the Qiu Shi Science and Technologies Foundation and a Young Scholar Award from the Cyrus Tang Foundation.We thank Dr. Yang Zhao for sharing published materials (Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences) and the Cryo-EM Center of the University of Science and Technology of China for the EM facility support. We are grateful to Y. Gao and all other staff members for their technical support on cryo-EM data collection. ","_id":"13209","date_updated":"2026-07-06T12:59:25Z","file":[{"access_level":"open_access","checksum":"f8ef92af6096834f91ce38587fb1db9f","relation":"main_file","file_name":"2023_PlantCommunications_Xia.pdf","date_created":"2024-01-30T10:54:40Z","file_id":"14900","content_type":"application/pdf","date_updated":"2024-01-30T10:54:40Z","success":1,"file_size":1434862,"creator":"dernst"}],"file_date_updated":"2024-01-30T10:54:40Z","oa":1,"date_published":"2023-11-13T00:00:00Z","pmid":1,"type":"journal_article","publication_status":"published","article_number":"100632","publication":"Plant Communications","intvolume":" 4","isi":1,"citation":{"mla":"Xia, Jing, et al. “Chemical Inhibition of Arabidopsis PIN-FORMED Auxin Transporters by the Anti-Inflammatory Drug Naproxen.” Plant Communications, vol. 4, no. 6, 100632, Elsevier, 2023, doi:10.1016/j.xplc.2023.100632.","ieee":"J. Xia et al., “Chemical inhibition of Arabidopsis PIN-FORMED auxin transporters by the anti-inflammatory drug naproxen,” Plant Communications, vol. 4, no. 6. Elsevier, 2023.","ista":"Xia J, Kong M, Yang Z, Sun L, Peng Y, Mao Y, Wei H, Ying W, Gao Y, Friml J, Weng J, Liu X, Sun L, Tan S. 2023. Chemical inhibition of Arabidopsis PIN-FORMED auxin transporters by the anti-inflammatory drug naproxen. Plant Communications. 4(6), 100632.","apa":"Xia, J., Kong, M., Yang, Z., Sun, L., Peng, Y., Mao, Y., … Tan, S. (2023). Chemical inhibition of Arabidopsis PIN-FORMED auxin transporters by the anti-inflammatory drug naproxen. Plant Communications. Elsevier. https://doi.org/10.1016/j.xplc.2023.100632","chicago":"Xia, Jing, Mengjuan Kong, Zhisen Yang, Lianghanxiao Sun, Yakun Peng, Yanbo Mao, Hong Wei, et al. “Chemical Inhibition of Arabidopsis PIN-FORMED Auxin Transporters by the Anti-Inflammatory Drug Naproxen.” Plant Communications. Elsevier, 2023. https://doi.org/10.1016/j.xplc.2023.100632.","short":"J. Xia, M. Kong, Z. Yang, L. Sun, Y. Peng, Y. Mao, H. Wei, W. Ying, Y. Gao, J. Friml, J. Weng, X. Liu, L. Sun, S. Tan, Plant Communications 4 (2023).","ama":"Xia J, Kong M, Yang Z, et al. Chemical inhibition of Arabidopsis PIN-FORMED auxin transporters by the anti-inflammatory drug naproxen. Plant Communications. 2023;4(6). doi:10.1016/j.xplc.2023.100632"},"quality_controlled":"1","tmp":{"image":"/images/cc_by_nc_nd.png","short":"CC BY-NC-ND (4.0)","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode"},"department":[{"_id":"JiFr"}],"doi":"10.1016/j.xplc.2023.100632","status":"public","month":"11","has_accepted_license":"1","language":[{"iso":"eng"}],"title":"Chemical inhibition of Arabidopsis PIN-FORMED auxin transporters by the anti-inflammatory drug naproxen","das_tickbox":"1","publisher":"Elsevier","year":"2023","volume":4,"issue":"6","article_processing_charge":"Yes","author":[{"last_name":"Xia","full_name":"Xia, Jing","first_name":"Jing"},{"full_name":"Kong, Mengjuan","first_name":"Mengjuan","last_name":"Kong"},{"first_name":"Zhisen","full_name":"Yang, Zhisen","last_name":"Yang"},{"first_name":"Lianghanxiao","full_name":"Sun, Lianghanxiao","last_name":"Sun"},{"first_name":"Yakun","full_name":"Peng, Yakun","last_name":"Peng"},{"last_name":"Mao","full_name":"Mao, Yanbo","first_name":"Yanbo"},{"last_name":"Wei","full_name":"Wei, Hong","first_name":"Hong"},{"full_name":"Ying, Wei","first_name":"Wei","last_name":"Ying"},{"full_name":"Gao, Yongxiao","first_name":"Yongxiao","last_name":"Gao"},{"orcid":"0000-0002-8302-7596","full_name":"Friml, Jiří","id":"4159519E-F248-11E8-B48F-1D18A9856A87","first_name":"Jiří","last_name":"Friml"},{"last_name":"Weng","first_name":"Jianping","full_name":"Weng, Jianping"},{"full_name":"Liu, Xin","first_name":"Xin","last_name":"Liu"},{"first_name":"Linfeng","full_name":"Sun, Linfeng","last_name":"Sun"},{"last_name":"Tan","full_name":"Tan, Shutang","first_name":"Shutang"}]},{"file":[{"relation":"main_file","file_name":"2023_ASHPC_Elefante.pdf","date_created":"2023-07-18T09:28:30Z","checksum":"0ab6173cd5c5634ed773cd37ff012681","access_level":"open_access","creator":"dernst","file_size":380354,"file_id":"13250","date_updated":"2023-07-18T09:28:30Z","success":1,"content_type":"application/pdf"}],"date_updated":"2026-07-06T13:01:58Z","file_date_updated":"2023-07-18T09:28:30Z","_id":"13162","oa_version":"Submitted Version","day":"01","date_created":"2023-06-23T11:03:18Z","ddc":["000"],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"conference":{"name":"ASHPC: Austrian-Slovenian HPC Meeting","start_date":"2023-06-12","end_date":"2023-06-15","location":"Maribor, Slovenia"},"quality_controlled":"1","corr_author":"1","citation":{"mla":"Elefante, Stefano, et al. “Cryo-EM Software Packages: A Sys-Admins Point of View.” ASHPC23 - Austrian-Slovenian HPC Meeting 2023, EuroCC Austria, 2023, pp. 42–42.","apa":"Elefante, S., Stadlbauer, S., Alexander, M. F., & Schlögl, A. (2023). Cryo-EM software packages: A sys-admins point of view. In ASHPC23 - Austrian-Slovenian HPC Meeting 2023 (pp. 42–42). Maribor, Slovenia: EuroCC Austria.","ista":"Elefante S, Stadlbauer S, Alexander MF, Schlögl A. 2023. Cryo-EM software packages: A sys-admins point of view. ASHPC23 - Austrian-Slovenian HPC Meeting 2023. ASHPC: Austrian-Slovenian HPC Meeting, 42–42.","ieee":"S. Elefante, S. Stadlbauer, M. F. Alexander, and A. Schlögl, “Cryo-EM software packages: A sys-admins point of view,” in ASHPC23 - Austrian-Slovenian HPC Meeting 2023, Maribor, Slovenia, 2023, pp. 42–42.","chicago":"Elefante, Stefano, Stephan Stadlbauer, Michael F Alexander, and Alois Schlögl. “Cryo-EM Software Packages: A Sys-Admins Point of View.” In ASHPC23 - Austrian-Slovenian HPC Meeting 2023, 42–42. EuroCC Austria, 2023.","short":"S. Elefante, S. Stadlbauer, M.F. Alexander, A. Schlögl, in:, ASHPC23 - Austrian-Slovenian HPC Meeting 2023, EuroCC Austria, 2023, pp. 42–42.","ama":"Elefante S, Stadlbauer S, Alexander MF, Schlögl A. Cryo-EM software packages: A sys-admins point of view. In: ASHPC23 - Austrian-Slovenian HPC Meeting 2023. EuroCC Austria; 2023:42-42."},"publication":"ASHPC23 - Austrian-Slovenian HPC Meeting 2023","publication_status":"published","page":"42-42","type":"conference_abstract","oa":1,"date_published":"2023-07-01T00:00:00Z","publisher":"EuroCC Austria","year":"2023","has_accepted_license":"1","title":"Cryo-EM software packages: A sys-admins point of view","language":[{"iso":"eng"}],"month":"07","status":"public","department":[{"_id":"ScienComp"}],"author":[{"first_name":"Stefano","id":"490F40CE-F248-11E8-B48F-1D18A9856A87","full_name":"Elefante, Stefano","last_name":"Elefante"},{"full_name":"Stadlbauer, Stephan","first_name":"Stephan","id":"4D0BC184-F248-11E8-B48F-1D18A9856A87","last_name":"Stadlbauer"},{"full_name":"Alexander, Michael F","first_name":"Michael F","id":"3A02A8FA-F248-11E8-B48F-1D18A9856A87","last_name":"Alexander"},{"last_name":"Schlögl","first_name":"Alois","id":"45BF87EE-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-5621-8100","full_name":"Schlögl, Alois"}],"article_processing_charge":"No"},{"month":"07","title":"Running Windows-applications on a Linux HPC cluster using WINE","language":[{"iso":"eng"}],"has_accepted_license":"1","department":[{"_id":"ScienComp"},{"_id":"EM-Fac"}],"status":"public","year":"2023","publisher":"EuroCC Austria","article_processing_charge":"No","author":[{"full_name":"Schlögl, Alois","orcid":"0000-0002-5621-8100","id":"45BF87EE-F248-11E8-B48F-1D18A9856A87","first_name":"Alois","last_name":"Schlögl"},{"last_name":"Elefante","full_name":"Elefante, Stefano","first_name":"Stefano","id":"490F40CE-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Hodirnau, Victor-Valentin","orcid":"0000-0003-3904-947X","id":"3661B498-F248-11E8-B48F-1D18A9856A87","first_name":"Victor-Valentin","last_name":"Hodirnau"}],"day":"01","oa_version":"Submitted Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","ddc":["000"],"date_created":"2023-06-23T11:01:23Z","_id":"13161","file_date_updated":"2023-07-18T09:18:55Z","file":[{"file_id":"13249","success":1,"content_type":"application/pdf","date_updated":"2023-07-18T09:18:55Z","creator":"dernst","file_size":316959,"access_level":"open_access","checksum":"ec8e4295d54171032cdd1b01423eb4a6","relation":"main_file","file_name":"2023_ASHPC_Schloegl.pdf","date_created":"2023-07-18T09:18:55Z"}],"date_updated":"2026-07-06T13:01:46Z","acknowledgement":"Thanks to Jesse Hansen for his suggestions on improving the abstract.","publication_status":"published","publication":"ASHPC23 - Austrian-Slovenian HPC Meeting 2023","date_published":"2023-07-01T00:00:00Z","oa":1,"page":"59-59","type":"conference_abstract","conference":{"name":"ASHPC: Austrian-Slovenian HPC Meeting","location":"Maribor, Slovenia","end_date":"2023-06-15","start_date":"2023-06-13"},"tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"quality_controlled":"1","citation":{"chicago":"Schlögl, Alois, Stefano Elefante, and Victor-Valentin Hodirnau. “Running Windows-Applications on a Linux HPC Cluster Using WINE.” In ASHPC23 - Austrian-Slovenian HPC Meeting 2023, 59–59. EuroCC Austria, 2023.","ista":"Schlögl A, Elefante S, Hodirnau V-V. 2023. Running Windows-applications on a Linux HPC cluster using WINE. ASHPC23 - Austrian-Slovenian HPC Meeting 2023. ASHPC: Austrian-Slovenian HPC Meeting, 59–59.","ieee":"A. Schlögl, S. Elefante, and V.-V. Hodirnau, “Running Windows-applications on a Linux HPC cluster using WINE,” in ASHPC23 - Austrian-Slovenian HPC Meeting 2023, Maribor, Slovenia, 2023, pp. 59–59.","apa":"Schlögl, A., Elefante, S., & Hodirnau, V.-V. (2023). Running Windows-applications on a Linux HPC cluster using WINE. In ASHPC23 - Austrian-Slovenian HPC Meeting 2023 (pp. 59–59). Maribor, Slovenia: EuroCC Austria.","mla":"Schlögl, Alois, et al. “Running Windows-Applications on a Linux HPC Cluster Using WINE.” ASHPC23 - Austrian-Slovenian HPC Meeting 2023, EuroCC Austria, 2023, pp. 59–59.","ama":"Schlögl A, Elefante S, Hodirnau V-V. Running Windows-applications on a Linux HPC cluster using WINE. In: ASHPC23 - Austrian-Slovenian HPC Meeting 2023. EuroCC Austria; 2023:59-59.","short":"A. Schlögl, S. Elefante, V.-V. Hodirnau, in:, ASHPC23 - Austrian-Slovenian HPC Meeting 2023, EuroCC Austria, 2023, pp. 59–59."},"corr_author":"1"},{"author":[{"last_name":"Huybrechts","full_name":"Huybrechts, D.","first_name":"D."},{"last_name":"Mauri","full_name":"Mauri, Mirko","id":"2cf70c34-09c1-11ed-bd8d-c34fac206130","first_name":"Mirko"}],"article_processing_charge":"No","issue":"1","volume":30,"project":[{"call_identifier":"H2020","name":"IST-BRIDGE: International postdoctoral program","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","grant_number":"101034413"}],"year":"2023","publisher":"International Press of Boston","das_tickbox":"1","title":"On type II degenerations of hyperkähler manifolds","language":[{"iso":"eng"}],"month":"06","status":"public","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2108.01587"}],"department":[{"_id":"TaHa"}],"doi":"10.4310/mrl.2023.v30.n1.a6","quality_controlled":"1","isi":1,"citation":{"ama":"Huybrechts D, Mauri M. On type II degenerations of hyperkähler manifolds. Mathematical Research Letters. 2023;30(1):125-141. doi:10.4310/mrl.2023.v30.n1.a6","short":"D. Huybrechts, M. Mauri, Mathematical Research Letters 30 (2023) 125–141.","chicago":"Huybrechts, D., and Mirko Mauri. “On Type II Degenerations of Hyperkähler Manifolds.” Mathematical Research Letters. International Press of Boston, 2023. https://doi.org/10.4310/mrl.2023.v30.n1.a6.","apa":"Huybrechts, D., & Mauri, M. (2023). On type II degenerations of hyperkähler manifolds. Mathematical Research Letters. International Press of Boston. https://doi.org/10.4310/mrl.2023.v30.n1.a6","ieee":"D. Huybrechts and M. Mauri, “On type II degenerations of hyperkähler manifolds,” Mathematical Research Letters, vol. 30, no. 1. International Press of Boston, pp. 125–141, 2023.","ista":"Huybrechts D, Mauri M. 2023. On type II degenerations of hyperkähler manifolds. Mathematical Research Letters. 30(1), 125–141.","mla":"Huybrechts, D., and Mirko Mauri. “On Type II Degenerations of Hyperkähler Manifolds.” Mathematical Research Letters, vol. 30, no. 1, International Press of Boston, 2023, pp. 125–41, doi:10.4310/mrl.2023.v30.n1.a6."},"corr_author":"1","intvolume":" 30","publication":"Mathematical Research Letters","publication_status":"published","page":"125-141","type":"journal_article","date_published":"2023-06-21T00:00:00Z","oa":1,"date_updated":"2026-07-06T13:37:53Z","_id":"13268","ec_funded":1,"acknowledgement":"The first author is supported by the ERC Synergy Grant HyperK. The second author is supported by the Max Planck Institute for Mathematics and the Institute of Science and Technology Austria. This project has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 101034413.","scopus_import":"1","oa_version":"Preprint","arxiv":1,"day":"21","publication_identifier":{"eissn":["1945-001X"],"issn":["1073-2780"]},"external_id":{"isi":["001027656000006"],"arxiv":["2108.01587"]},"date_created":"2023-07-23T22:01:14Z","article_type":"original","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","abstract":[{"text":"We give a simple argument to prove Nagai’s conjecture for type II degenerations of compact hyperkähler manifolds and cohomology classes of middle degree. Under an additional assumption, the techniques yield the conjecture in arbitrary degree. This would complete the proof of Nagai’s conjecture in general, as it was proved already for type I degenerations by Kollár, Laza, Saccà, and Voisin [10] and independently by Soldatenkov [18], while it is immediate for type III degenerations. Our arguments are close in spirit to a recent paper by Harder [8] proving similar results for the restrictive class of good degenerations.","lang":"eng"}]}]