[{"PlanS_conform":"1","citation":{"short":"D. Babic, M. Zupunski, J. Friml, New Phytologist 250 (2026) 1483–1491.","ieee":"D. Babic, M. Zupunski, and J. Friml, “Imaging and genetic toolbox to study Arabidopsis embryogenesis,” <i>New Phytologist</i>, vol. 250, no. 3. Wiley, pp. 1483–1491, 2026.","ista":"Babic D, Zupunski M, Friml J. 2026. Imaging and genetic toolbox to study Arabidopsis embryogenesis. New Phytologist. 250(3), 1483–1491.","ama":"Babic D, Zupunski M, Friml J. Imaging and genetic toolbox to study Arabidopsis embryogenesis. <i>New Phytologist</i>. 2026;250(3):1483-1491. doi:<a href=\"https://doi.org/10.1111/nph.71072\">10.1111/nph.71072</a>","chicago":"Babic, David, Milan Zupunski, and Jiří Friml. “Imaging and Genetic Toolbox to Study Arabidopsis Embryogenesis.” <i>New Phytologist</i>. Wiley, 2026. <a href=\"https://doi.org/10.1111/nph.71072\">https://doi.org/10.1111/nph.71072</a>.","apa":"Babic, D., Zupunski, M., &#38; Friml, J. (2026). Imaging and genetic toolbox to study Arabidopsis embryogenesis. <i>New Phytologist</i>. Wiley. <a href=\"https://doi.org/10.1111/nph.71072\">https://doi.org/10.1111/nph.71072</a>","mla":"Babic, David, et al. “Imaging and Genetic Toolbox to Study Arabidopsis Embryogenesis.” <i>New Phytologist</i>, vol. 250, no. 3, Wiley, 2026, pp. 1483–91, doi:<a href=\"https://doi.org/10.1111/nph.71072\">10.1111/nph.71072</a>."},"OA_type":"hybrid","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"status":"public","day":"01","oa":1,"file_date_updated":"2026-07-27T11:46:25Z","publisher":"Wiley","department":[{"_id":"JiFr"},{"_id":"GradSch"}],"date_updated":"2026-07-27T11:47:24Z","month":"05","language":[{"iso":"eng"}],"date_published":"2026-05-01T00:00:00Z","type":"journal_article","acknowledgement":"The authors would like to acknowledge the many colleagues whose valuable contributions to the field could not be included in this review due to space limitations and reference constraints. Open Access funding provided by Institute of Science and Technology Austria/KEMÖ.","article_type":"original","intvolume":"       250","oa_version":"Published Version","_id":"21483","scopus_import":"1","file":[{"date_updated":"2026-07-27T11:46:25Z","file_size":1708392,"checksum":"67513dde983631bed9613fdaadbbee06","relation":"main_file","access_level":"open_access","file_id":"22424","creator":"dernst","success":1,"file_name":"2026_NewPhytologist_Babic.pdf","content_type":"application/pdf","date_created":"2026-07-27T11:46:25Z"}],"quality_controlled":"1","corr_author":"1","supplementarymaterial":"no","ddc":["580"],"has_accepted_license":"1","researchdata_availability":"no","year":"2026","date_created":"2026-03-23T14:59:06Z","publication":"New Phytologist","das_tickbox":"0","issue":"3","doi":"10.1111/nph.71072","publication_identifier":{"issn":["0028-646X"],"eissn":["1469-8137"]},"abstract":[{"lang":"eng","text":"Embryogenesis in the model plant Arabidopsis thaliana provides a framework for understanding how cell polarity and patterning coordinate with hormonal signalling to establish the plant body plan. Following fertilisation, the zygote divides asymmetrically to generate apical and basal lineages, establishing the apical–basal axis that defines future shoot and root poles. Genetic and molecular analyses of classical mutants including gnom, monopteros (mp), bodenlos (bdl) and topless revealed that localised auxin biosynthesis, directional transport and downstream transcriptional responses are central to apical–basal axis establishment and organ initiation. The main components of this regulation are polarly localised PIN auxin transporters and downstream modules involving MONOPTEROS and WUSCHEL-RELATED HOMEOBOX transcription factors. Advances in microscopy have transformed the study of Arabidopsis embryogenesis: fluorescence-compatible clearing reagents and three-dimensional reconstructions now permit quantitative analyses of cell geometry, division orientation, and cytoskeletal dynamics. Live ovule imaging setups with confocal laser scanning and multiphoton microscopes enable real-time observation of embryo development, while laser-assisted cell ablation can be used to probe cell-to-cell communication and fate plasticity. Together, these methodological breakthroughs position Arabidopsis embryos as a prime model for dissecting the chemical and biophysical cues that shape plant development."}],"publication_status":"published","external_id":{"pmid":["41808651"]},"page":"1483-1491","article_processing_charge":"Yes (via OA deal)","title":"Imaging and genetic toolbox to study Arabidopsis embryogenesis","volume":250,"OA_place":"publisher","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"id":"db566d23-f6e0-11ea-865d-e6f270e968e7","full_name":"Babic, David","first_name":"David","last_name":"Babic"},{"last_name":"Zupunski","first_name":"Milan","id":"f6a21fce-573e-11f0-a150-a8d96aee2539","full_name":"Zupunski, Milan"},{"orcid":"0000-0002-8302-7596","id":"4159519E-F248-11E8-B48F-1D18A9856A87","full_name":"Friml, Jiří","last_name":"Friml","first_name":"Jiří"}],"pmid":1},{"date_published":"2026-04-01T00:00:00Z","month":"04","language":[{"iso":"eng"}],"date_updated":"2026-07-27T11:56:04Z","department":[{"_id":"MaRo"}],"publisher":"Oxford University Press","file_date_updated":"2026-07-27T11:54:00Z","oa":1,"scopus_import":"1","_id":"21484","oa_version":"Published Version","intvolume":"       232","article_type":"original","type":"journal_article","acknowledgement":"We thank members of the Medical Genomics group at ISTA for their comments, which improved this manuscript. This work was funded by an SNSF Eccellenza Grant to MRR (PCEGP3-181181), and by core funding from the Institute of Science and Technology Austria.","citation":{"ieee":"I. Krätschmer and M. R. Robinson, “A quantitative genetic model for indirect genetic effects and genomic imprinting under random and assortative mating,” <i>Genetics</i>, vol. 232, no. 4. Oxford University Press, 2026.","short":"I. Krätschmer, M.R. Robinson, Genetics 232 (2026).","ama":"Krätschmer I, Robinson MR. A quantitative genetic model for indirect genetic effects and genomic imprinting under random and assortative mating. <i>Genetics</i>. 2026;232(4). doi:<a href=\"https://doi.org/10.1093/genetics/iyag042\">10.1093/genetics/iyag042</a>","ista":"Krätschmer I, Robinson MR. 2026. A quantitative genetic model for indirect genetic effects and genomic imprinting under random and assortative mating. Genetics. 232(4), iyag042.","chicago":"Krätschmer, Ilse, and Matthew Richard Robinson. “A Quantitative Genetic Model for Indirect Genetic Effects and Genomic Imprinting under Random and Assortative Mating.” <i>Genetics</i>. Oxford University Press, 2026. <a href=\"https://doi.org/10.1093/genetics/iyag042\">https://doi.org/10.1093/genetics/iyag042</a>.","apa":"Krätschmer, I., &#38; Robinson, M. R. (2026). A quantitative genetic model for indirect genetic effects and genomic imprinting under random and assortative mating. <i>Genetics</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/genetics/iyag042\">https://doi.org/10.1093/genetics/iyag042</a>","mla":"Krätschmer, Ilse, and Matthew Richard Robinson. “A Quantitative Genetic Model for Indirect Genetic Effects and Genomic Imprinting under Random and Assortative Mating.” <i>Genetics</i>, vol. 232, no. 4, iyag042, Oxford University Press, 2026, doi:<a href=\"https://doi.org/10.1093/genetics/iyag042\">10.1093/genetics/iyag042</a>."},"PlanS_conform":"1","day":"01","status":"public","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"OA_type":"hybrid","title":"A quantitative genetic model for indirect genetic effects and genomic imprinting under random and assortative mating","article_processing_charge":"Yes (via OA deal)","publication_status":"published","external_id":{"pmid":["41677404"]},"abstract":[{"text":"An individual's phenotype reflects a complex interplay of the direct effects of their DNA, epigenetic modifications of their DNA induced by their parents, and indirect effects of their parents' DNA. Here, we derive how the genetic variance within a population is changed under the influence of indirect maternal, paternal and parent-of-origin effects under random mating. We also consider indirect effects of a sibling, in particular how the genetic variance is altered when looking at the phenotypic difference between two siblings. The calculations are then extended to include assortative mating (AM), which alters the variance by inducing increased homozygosity and correlations within and across loci. AM likely leads to covariance of parental genetic effects, a measure of the similarity of parents in the indirect effects they have on their children. We propose that this assortment for parental characteristics, where biological parents create similar environments for their children, can create shared parental effects across traits and the appearance of cross-trait AM. Our theory shows how the resemblance among relatives increases under both AM, indirect and parent-of-origin effects. When our model is used to predict correlations among relatives in human height, we find that explaining the patterns observed in real data requires both indirect genetic effects and assortative mating. The degree to which direct, indirect and epigenetic effects shape the phenotypic variance of complex traits remains an open question that requires large-scale family data to be resolved.","lang":"eng"}],"pmid":1,"related_material":{"link":[{"relation":"software","url":"https://github.com/medical-genomics-group/familyMC"}]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"first_name":"Ilse","last_name":"Krätschmer","full_name":"Krätschmer, Ilse","orcid":"0000-0002-5636-9259","id":"30d4014e-7753-11eb-b44b-db6d61112e73"},{"last_name":"Robinson","first_name":"Matthew Richard","full_name":"Robinson, Matthew Richard","orcid":"0000-0001-8982-8813","id":"E5D42276-F5DA-11E9-8E24-6303E6697425"}],"OA_place":"publisher","volume":232,"has_accepted_license":"1","ddc":["570"],"supplementarymaterial":"no","corr_author":"1","file":[{"file_id":"22425","checksum":"926322c83b02522e96ab7a86e4011eec","relation":"main_file","access_level":"open_access","date_updated":"2026-07-27T11:54:00Z","file_size":734475,"date_created":"2026-07-27T11:54:00Z","content_type":"application/pdf","file_name":"2026_Genetics_Kraetschmer.pdf","creator":"dernst","success":1}],"quality_controlled":"1","publication_identifier":{"issn":["1943-2631"]},"dataavailabilitystatement":"The code used to simulate data can be found at https://github.\r\ncom/medical-genomics-group/familyMC. Simulations are based\r\non genotype data from 1000 Genomes Project downloaded from\r\nhttps://ftp.1000genomes.ebi. ac.uk/vol1/ftp/release/20130502/.\r\nSupplemental material available at GENETICS online.","doi":"10.1093/genetics/iyag042","issue":"4","das_tickbox":"1","publication":"Genetics","date_created":"2026-03-23T15:02:54Z","year":"2026","article_number":"iyag042","researchdata_availability":"no"},{"citation":{"chicago":"Akther, Sonam, Ashley Bomin Lee, Ayumu Konno, Antonis Asiminas, Marta Vittani, Tsuneko Mishima, Hirokazu Hirai, et al. “Distribution and Functional Significance of Rodent Cerebellar Glycogen.” <i>IScience</i>. Elsevier, 2026. <a href=\"https://doi.org/10.1016/j.isci.2026.115192\">https://doi.org/10.1016/j.isci.2026.115192</a>.","apa":"Akther, S., Lee, A. B., Konno, A., Asiminas, A., Vittani, M., Mishima, T., … Hirase, H. (2026). Distribution and functional significance of rodent cerebellar glycogen. <i>IScience</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.isci.2026.115192\">https://doi.org/10.1016/j.isci.2026.115192</a>","mla":"Akther, Sonam, et al. “Distribution and Functional Significance of Rodent Cerebellar Glycogen.” <i>IScience</i>, vol. 29, no. 4, 115192, Elsevier, 2026, doi:<a href=\"https://doi.org/10.1016/j.isci.2026.115192\">10.1016/j.isci.2026.115192</a>.","ieee":"S. Akther <i>et al.</i>, “Distribution and functional significance of rodent cerebellar glycogen,” <i>iScience</i>, vol. 29, no. 4. Elsevier, 2026.","short":"S. Akther, A.B. Lee, A. Konno, A. Asiminas, M. Vittani, T. Mishima, H. Hirai, C.F. Meehan, J. Duran, J. Guinovart, H. Ashida, T. Morita, O. Baba, R. Shigemoto, M. Nedergaard, H. Hirase, IScience 29 (2026).","ista":"Akther S, Lee AB, Konno A, Asiminas A, Vittani M, Mishima T, Hirai H, Meehan CF, Duran J, Guinovart J, Ashida H, Morita T, Baba O, Shigemoto R, Nedergaard M, Hirase H. 2026. Distribution and functional significance of rodent cerebellar glycogen. iScience. 29(4), 115192.","ama":"Akther S, Lee AB, Konno A, et al. Distribution and functional significance of rodent cerebellar glycogen. <i>iScience</i>. 2026;29(4). doi:<a href=\"https://doi.org/10.1016/j.isci.2026.115192\">10.1016/j.isci.2026.115192</a>"},"PlanS_conform":"1","day":"17","status":"public","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"OA_type":"gold","date_published":"2026-04-17T00:00:00Z","month":"04","language":[{"iso":"eng"}],"date_updated":"2026-07-27T12:05:30Z","publisher":"Elsevier","department":[{"_id":"RySh"}],"DOAJ_listed":"1","file_date_updated":"2026-07-27T12:03:23Z","oa":1,"scopus_import":"1","_id":"21502","intvolume":"        29","oa_version":"Published Version","article_type":"original","type":"journal_article","acknowledgement":"This work was supported by the Novo Nordisk Foundation (NNFOC0058058, H. Hirase), the Danmarks Frie Forskningsfond (0134-00107B and 5283-00069A, H.Hirase), the Lundbeck Foundation, Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research (KAKENHI) program (22K06454/24H01221, A.K.; 23K27482, H.Hirai), the Japan Agency for Medical Research and Development (AMED) Brain Mapping by Integrated Neurotechnologies for Disease Studies (Brain/MINDS) (JP21dm0207111, H. Hirai), AMED Brain/MINDS 2.0 (JP23wm0625001 and JP24wm0625103, H. Hirai), and grants from the Spanish Ministerio de Ciencia e Innovación (MCIU/FEDER/AEI) (PID2020-118699 GB-100, J.D.) and the Fundación Ramón Areces (J.D.). Sonam Akther has been supported by the RIKEN IPA fellowship. We are thankful to Dr. Yuki Oe for his support in the initial stage of this study and to Dan Xue for his help with the graphical abstract. We thank Dr. Pia Weikop for providing CTN research infrastructure. The authors declare no competing financial interests.","has_accepted_license":"1","ddc":["570"],"supplementarymaterial":"no","quality_controlled":"1","file":[{"checksum":"9c9ccc87072d04808e4af407d647ed20","relation":"main_file","access_level":"open_access","file_size":14469960,"date_updated":"2026-07-27T12:03:23Z","file_id":"22427","creator":"dernst","success":1,"date_created":"2026-07-27T12:03:23Z","content_type":"application/pdf","file_name":"2026_iScience_Akther.pdf"}],"dataavailabilitystatement":"This study did not generate new materials or reagents.All data supporting the findings of this study are available from the lead contact upon reasonable request.\r\nThis study did not generate any new code.\r\nAdditional raw data can be obtained from the lead contact upon reasonable request.","doi":"10.1016/j.isci.2026.115192","publication_identifier":{"eissn":["2589-0042"]},"issue":"4","das_tickbox":"1","publication":"iScience","date_created":"2026-03-29T22:07:07Z","year":"2026","article_number":"115192","researchdata_availability":"upon request","title":"Distribution and functional significance of rodent cerebellar glycogen","article_processing_charge":"Yes","publication_status":"published","external_id":{"pmid":["41890976"]},"abstract":[{"lang":"eng","text":"The mammalian brain stores glucose, the main circulating energy substrate, as glycogen. In rodents, the cerebellum contains relatively high glycogen levels, yet its cellular and subcellular distribution remains poorly defined. Using monoclonal antibodies against glycogen, we examined its distribution in the mouse cerebellar cortex. Glycogen was predominantly localized to Bergmann glia (BG) processes in the molecular layer and was also detected in Purkinje cells (PCs), the principal cerebellar neurons. To assess the functional significance of cerebellar glycogen, we analyzed behavior in mice lacking glycogen synthase 1 (Gys1) in BG or PCs using a floxed Gys1 line. Gys1 deficiency in either PCs or GFAP-positive cells reduced anxiety-like behavior, whereas combined deletion caused PC degeneration and ataxia. These findings reveal a critical role for glycogen metabolism in both astrocytes and neurons in cerebellar function."}],"pmid":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"full_name":"Akther, Sonam","first_name":"Sonam","last_name":"Akther"},{"first_name":"Ashley Bomin","last_name":"Lee","full_name":"Lee, Ashley Bomin"},{"full_name":"Konno, Ayumu","last_name":"Konno","first_name":"Ayumu"},{"full_name":"Asiminas, Antonis","last_name":"Asiminas","first_name":"Antonis"},{"last_name":"Vittani","first_name":"Marta","full_name":"Vittani, Marta"},{"last_name":"Mishima","first_name":"Tsuneko","full_name":"Mishima, Tsuneko"},{"first_name":"Hirokazu","last_name":"Hirai","full_name":"Hirai, Hirokazu"},{"full_name":"Meehan, Claire Francesca","first_name":"Claire Francesca","last_name":"Meehan"},{"full_name":"Duran, Jordi","first_name":"Jordi","last_name":"Duran"},{"last_name":"Guinovart","first_name":"Joan","full_name":"Guinovart, Joan"},{"last_name":"Ashida","first_name":"Hitoshi","full_name":"Ashida, Hitoshi"},{"full_name":"Morita, Tsuyoshi","last_name":"Morita","first_name":"Tsuyoshi"},{"full_name":"Baba, Otto","first_name":"Otto","last_name":"Baba"},{"first_name":"Ryuichi","last_name":"Shigemoto","full_name":"Shigemoto, Ryuichi","orcid":"0000-0001-8761-9444","id":"499F3ABC-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Nedergaard","first_name":"Maiken","full_name":"Nedergaard, Maiken"},{"full_name":"Hirase, Hajime","last_name":"Hirase","first_name":"Hajime"}],"OA_place":"publisher","volume":29},{"supplementarymaterial":"yes","corr_author":"1","file":[{"creator":"dernst","success":1,"content_type":"application/pdf","file_name":"2026_EvolutionLetters_Layana.pdf","date_created":"2026-07-27T11:59:40Z","date_updated":"2026-07-27T11:59:40Z","file_size":1895786,"checksum":"7c929e78c369a5e6e064bcf263e955ad","relation":"main_file","access_level":"open_access","file_id":"22426"}],"quality_controlled":"1","has_accepted_license":"1","ddc":["570"],"date_created":"2026-03-23T15:05:42Z","year":"2026","article_number":"qrag003","researchdata_availability":"yes","publication_identifier":{"eissn":["2056-3744"]},"dataavailabilitystatement":"Scripts, Supplementary Datasets 1–7, and Tables S1, S2, S5 and S6 are also available at https://doi.org/10.15479/AT-ISTA-21116. Pipelines are available at https://git.ista.ac.at/llayanaf/transitions_diptera.","doi":"10.1093/evlett/qrag003","issue":"3","publication":"Evolution Letters","article_processing_charge":"Yes","publication_status":"published","abstract":[{"text":"Sex-chromosome systems are highly variable across animals, but how they transition from one to another is not well understood. Diptera have undergone multiple sex-chromosome turnovers and expansions while maintaining their general chromosomal content, which makes them an ideal clade to study such transitions. We analyzed more than 100 dipteran whole-genome assemblies and identified 4 new lineages that underwent sex-chromosome turnover (in addition to the 5 previously reported). We find that the majority of turnovers happened in the group Schizophora, which tend to have fewer genes on Muller element F (the chromosome homologous to the ancestral insect X chromosome) than lower dipterans, a factor previously hypothesized to facilitate turnover. Most derived X chromosomes have higher GC content than autosomes, consistent with a high prevalence of male achiasmy in Diptera. In addition, an excess of gene movement out of the X is detected for most of these new X chromosomes, and many of these moved genes have high testis expression in Drosophila, suggesting that out-of-X gene movement contributes to the long-term demasculinization of X chromosomes.","lang":"eng"}],"title":"Causes and consequences of sex-chromosome turnovers in Diptera","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"last_name":"Layana Franco","first_name":"Lorena Alexandra","full_name":"Layana Franco, Lorena Alexandra","id":"02814589-eb8f-11eb-b029-a70074f3f18f","orcid":"0000-0002-1253-6297"},{"orcid":"0000-0002-9752-7380","id":"4E099E4E-F248-11E8-B48F-1D18A9856A87","full_name":"Toups, Melissa A","first_name":"Melissa A","last_name":"Toups"},{"full_name":"Vicoso, Beatriz","id":"49E1C5C6-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-4579-8306","first_name":"Beatriz","last_name":"Vicoso"}],"volume":10,"OA_place":"publisher","acknowledged_ssus":[{"_id":"ScienComp"}],"citation":{"short":"L.A. Layana Franco, M.A. Toups, B. Vicoso, Evolution Letters 10 (2026).","ieee":"L. A. Layana Franco, M. A. Toups, and B. Vicoso, “Causes and consequences of sex-chromosome turnovers in Diptera,” <i>Evolution Letters</i>, vol. 10, no. 3. Oxford University Press, 2026.","ama":"Layana Franco LA, Toups MA, Vicoso B. Causes and consequences of sex-chromosome turnovers in Diptera. <i>Evolution Letters</i>. 2026;10(3). doi:<a href=\"https://doi.org/10.1093/evlett/qrag003\">10.1093/evlett/qrag003</a>","ista":"Layana Franco LA, Toups MA, Vicoso B. 2026. Causes and consequences of sex-chromosome turnovers in Diptera. Evolution Letters. 10(3), qrag003.","apa":"Layana Franco, L. A., Toups, M. A., &#38; Vicoso, B. (2026). Causes and consequences of sex-chromosome turnovers in Diptera. <i>Evolution Letters</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/evlett/qrag003\">https://doi.org/10.1093/evlett/qrag003</a>","chicago":"Layana Franco, Lorena Alexandra, Melissa A Toups, and Beatriz Vicoso. “Causes and Consequences of Sex-Chromosome Turnovers in Diptera.” <i>Evolution Letters</i>. Oxford University Press, 2026. <a href=\"https://doi.org/10.1093/evlett/qrag003\">https://doi.org/10.1093/evlett/qrag003</a>.","mla":"Layana Franco, Lorena Alexandra, et al. “Causes and Consequences of Sex-Chromosome Turnovers in Diptera.” <i>Evolution Letters</i>, vol. 10, no. 3, qrag003, Oxford University Press, 2026, doi:<a href=\"https://doi.org/10.1093/evlett/qrag003\">10.1093/evlett/qrag003</a>."},"project":[{"name":"Sex chromosomes in evolution and development","grant_number":"PAT 8748323","_id":"8ed82125-16d5-11f0-9cad-fbcae312235b"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"OA_type":"gold","status":"public","day":"01","file_date_updated":"2026-07-27T11:59:40Z","DOAJ_listed":"1","oa":1,"date_published":"2026-06-01T00:00:00Z","language":[{"iso":"eng"}],"month":"06","date_updated":"2026-07-27T12:00:11Z","publisher":"Oxford University Press","department":[{"_id":"BeVi"},{"_id":"GradSch"}],"intvolume":"        10","oa_version":"Published Version","article_type":"original","acknowledgement":"This work was supported by a grant from the Austrian Science Fund (FWF, grant number PAT 8748323) to B.V. We thank the Vicoso group for their feedback on an early version of the manuscript. We are grateful to Kamil Jaron and Julia Gries for helpful discussions and for sharing their unpublished work. Computational resources and support were provided by the Scientific Computing Unit at ISTA.","type":"journal_article","_id":"21486"},{"date_published":"2026-06-08T00:00:00Z","month":"06","language":[{"iso":"eng"}],"date_updated":"2026-07-27T11:26:11Z","department":[{"_id":"VeSu"}],"arxiv":1,"publisher":"Springer Nature","DOAJ_listed":"1","file_date_updated":"2026-07-27T11:24:16Z","oa":1,"scopus_import":"1","_id":"21436","intvolume":"        11","oa_version":"Published Version","article_type":"original","type":"journal_article","acknowledgement":"We thank Linda Ye and Yue Sun for helpful discussion. Experimental and theoretical work at LBNL and UC Berkeley was funded by the Quantum Materials (KC2202) program under the U.S. Department of Energy, Office of Science, Office of Basic Energy Sciences, Materials Sciences and Engineering Division under Contract No. DE-AC02-05CH11231. V.S. and J.O. received support from the Gordon and Betty Moore Foundation’s EPiQS Initiative through Grant GBMF4537 to J.O. at UC Berkeley. J.K. received support from the National Science Foundation Graduate Research Fellowship Program under Grant No. 2146752. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. During the preparation of this manuscript, we became aware of the following related work: refs. 56,57,58.","citation":{"apa":"Kruppe, J., Rodriguez, J., Xu, C., Analytis, J., Orenstein, J., &#38; Sunko, V. (2026). Anisotropic multi-Q order in CoxTaS2. <i>Npj Quantum Materials</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41535-026-00856-w\">https://doi.org/10.1038/s41535-026-00856-w</a>","chicago":"Kruppe, Jonathon, Josue Rodriguez, Catherine Xu, James Analytis, Joseph Orenstein, and Veronika Sunko. “Anisotropic Multi-Q Order in CoxTaS2.” <i>Npj Quantum Materials</i>. Springer Nature, 2026. <a href=\"https://doi.org/10.1038/s41535-026-00856-w\">https://doi.org/10.1038/s41535-026-00856-w</a>.","mla":"Kruppe, Jonathon, et al. “Anisotropic Multi-Q Order in CoxTaS2.” <i>Npj Quantum Materials</i>, vol. 11, 47, Springer Nature, 2026, doi:<a href=\"https://doi.org/10.1038/s41535-026-00856-w\">10.1038/s41535-026-00856-w</a>.","ieee":"J. Kruppe, J. Rodriguez, C. Xu, J. Analytis, J. Orenstein, and V. Sunko, “Anisotropic multi-Q order in CoxTaS2,” <i>npj Quantum Materials</i>, vol. 11. Springer Nature, 2026.","short":"J. Kruppe, J. Rodriguez, C. Xu, J. Analytis, J. Orenstein, V. Sunko, Npj Quantum Materials 11 (2026).","ista":"Kruppe J, Rodriguez J, Xu C, Analytis J, Orenstein J, Sunko V. 2026. Anisotropic multi-Q order in CoxTaS2. npj Quantum Materials. 11, 47.","ama":"Kruppe J, Rodriguez J, Xu C, Analytis J, Orenstein J, Sunko V. Anisotropic multi-Q order in CoxTaS2. <i>npj Quantum Materials</i>. 2026;11. doi:<a href=\"https://doi.org/10.1038/s41535-026-00856-w\">10.1038/s41535-026-00856-w</a>"},"PlanS_conform":"1","status":"public","day":"08","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"OA_type":"gold","title":"Anisotropic multi-Q order in CoxTaS2","article_processing_charge":"Yes","publication_status":"published","external_id":{"arxiv":["2507.12588"]},"abstract":[{"text":"The cobalt-intercalated transition metal dichalcogenide CoxTaS2 hosts a rich landscape of magnetic phases that depend sensitively on x. While the stoichiometric compound with x = 1/3 exhibits a single magnetic transition, samples with x≤0.325 display two transitions with an anomalous Hall effect (AHE) emerging in the lower temperature phase. Here, we resolve the spin structure in each phase by employing a suite of magneto-optical probes that include the discovery of anomalous magneto-birefringence: a spontaneous time-reversal sensitive rotation of the principal optic axes. A symmetry-based analysis identifies the AHE-active phase as an anisotropic (2+1)Q state, in which magnetic modulation at one wavevector (Q) differs in symmetry from that at the remaining two. The (2+1)Q state naturally exhibits scalar spin chirality as a mechanism for the AHE and expands the classification of multi-Q magnetic phases.","lang":"eng"}],"author":[{"first_name":"Jonathon","last_name":"Kruppe","full_name":"Kruppe, Jonathon"},{"full_name":"Rodriguez, Josue","last_name":"Rodriguez","first_name":"Josue"},{"last_name":"Xu","first_name":"Catherine","full_name":"Xu, Catherine"},{"first_name":"James","last_name":"Analytis","full_name":"Analytis, James"},{"last_name":"Orenstein","first_name":"Joseph","full_name":"Orenstein, Joseph"},{"orcid":"0000-0003-2724-3523","id":"23cb1cf6-2c7a-11ef-91a4-f72fc19f20b3","full_name":"Sunko, Veronika","last_name":"Sunko","first_name":"Veronika"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":11,"OA_place":"publisher","has_accepted_license":"1","ddc":["530"],"supplementarymaterial":"yes","corr_author":"1","file":[{"creator":"dernst","success":1,"file_name":"2026_npjQuantumMaterials_Kruppe.pdf","content_type":"application/pdf","date_created":"2026-07-27T11:24:16Z","file_size":2072860,"date_updated":"2026-07-27T11:24:16Z","checksum":"4d5f7e36be6190de93aa1a1bc852d188","relation":"main_file","access_level":"open_access","file_id":"22421"}],"quality_controlled":"1","publication_identifier":{"eissn":["2397-4648"]},"doi":"10.1038/s41535-026-00856-w","dataavailabilitystatement":"The data underpinning the manuscript are available upon reasonable request.","das_tickbox":"1","publication":"npj Quantum Materials","date_created":"2026-03-11T10:39:55Z","year":"2026","article_number":"47","researchdata_availability":"upon request"},{"date_published":"2026-08-01T00:00:00Z","language":[{"iso":"eng"}],"month":"08","date_updated":"2026-07-27T11:40:33Z","publisher":"Wiley","arxiv":1,"department":[{"_id":"RoSe"}],"file_date_updated":"2026-07-27T11:38:57Z","oa":1,"scopus_import":"1","_id":"21472","intvolume":"        79","oa_version":"Published Version","article_type":"original","acknowledgement":"We thank the referees for valuable remarks. This work was partially funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) via the TRR 352 – Project-ID 470903074. PTN was partially supported by the European Research Council via the ERC Consolidator Grant RAMBAS – Project-Nr. 10104424.\r\nOpen access publishing facilitated by Università degli Studi di Milano, as part of the Wiley - CRUI-CARE agreement.","type":"journal_article","citation":{"apa":"Giacomelli, E. L., Hainzl, C., Nam, P. T., &#38; Seiringer, R. (2026). The Huang–Yang formula for the low-density Fermi gas: Upper bound. <i>Communications on Pure and Applied Mathematics</i>. Wiley. <a href=\"https://doi.org/10.1002/cpa.70040\">https://doi.org/10.1002/cpa.70040</a>","chicago":"Giacomelli, Emanuela L., Christian Hainzl, Phan Thành Nam, and Robert Seiringer. “The Huang–Yang Formula for the Low-Density Fermi Gas: Upper Bound.” <i>Communications on Pure and Applied Mathematics</i>. Wiley, 2026. <a href=\"https://doi.org/10.1002/cpa.70040\">https://doi.org/10.1002/cpa.70040</a>.","mla":"Giacomelli, Emanuela L., et al. “The Huang–Yang Formula for the Low-Density Fermi Gas: Upper Bound.” <i>Communications on Pure and Applied Mathematics</i>, vol. 79, no. 8, Wiley, 2026, pp. 1919–72, doi:<a href=\"https://doi.org/10.1002/cpa.70040\">10.1002/cpa.70040</a>.","short":"E.L. Giacomelli, C. Hainzl, P.T. Nam, R. Seiringer, Communications on Pure and Applied Mathematics 79 (2026) 1919–1972.","ieee":"E. L. Giacomelli, C. Hainzl, P. T. Nam, and R. Seiringer, “The Huang–Yang formula for the low-density Fermi gas: Upper bound,” <i>Communications on Pure and Applied Mathematics</i>, vol. 79, no. 8. Wiley, pp. 1919–1972, 2026.","ama":"Giacomelli EL, Hainzl C, Nam PT, Seiringer R. The Huang–Yang formula for the low-density Fermi gas: Upper bound. <i>Communications on Pure and Applied Mathematics</i>. 2026;79(8):1919-1972. doi:<a href=\"https://doi.org/10.1002/cpa.70040\">10.1002/cpa.70040</a>","ista":"Giacomelli EL, Hainzl C, Nam PT, Seiringer R. 2026. The Huang–Yang formula for the low-density Fermi gas: Upper bound. Communications on Pure and Applied Mathematics. 79(8), 1919–1972."},"day":"01","status":"public","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"OA_type":"hybrid","title":"The Huang–Yang formula for the low-density Fermi gas: Upper bound","article_processing_charge":"Yes (via OA deal)","page":"1919-1972","external_id":{"arxiv":["2409.17914"]},"publication_status":"published","abstract":[{"text":"We study the ground state energy of a gas of spin 1/2 fermions with repulsive short-range interactions. We derive an upper bound that agrees, at low density e, with the Huang–Yang conjecture. The latter captures the first three terms in an asymptotic low-density expansion, and in particular the Huang–Yang correction term of order e^7/3. Our trial state is constructed using an adaptation of the bosonic Bogoliubov theory to the Fermi system, where the correlation structure of fermionic particles is incorporated by quasi-bosonic Bogoliubov transformations. In the latter, it is important to consider a modified zero-energy scattering equation that takes into account the presence of the Fermi sea, in the spirit of the Bethe–Goldstone equation.","lang":"eng"}],"author":[{"full_name":"Giacomelli, Emanuela L.","first_name":"Emanuela L.","last_name":"Giacomelli"},{"full_name":"Hainzl, Christian","first_name":"Christian","last_name":"Hainzl"},{"last_name":"Nam","first_name":"Phan Thành","full_name":"Nam, Phan Thành"},{"last_name":"Seiringer","first_name":"Robert","full_name":"Seiringer, Robert","id":"4AFD0470-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6781-0521"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":79,"OA_place":"publisher","has_accepted_license":"1","ddc":["510"],"supplementarymaterial":"no","file":[{"file_id":"22423","date_updated":"2026-07-27T11:38:57Z","file_size":2224756,"relation":"main_file","checksum":"4ef624157c2f6cb837be229dd6b912cc","access_level":"open_access","content_type":"application/pdf","file_name":"2026_CommPureApplMath_Giacomelli.pdf","date_created":"2026-07-27T11:38:57Z","creator":"dernst","success":1}],"quality_controlled":"1","publication_identifier":{"eissn":["1097-0312"],"issn":["0010-3640"]},"doi":"10.1002/cpa.70040","issue":"8","das_tickbox":"0","publication":"Communications on Pure and Applied Mathematics","date_created":"2026-03-22T23:04:33Z","year":"2026","researchdata_availability":"no"},{"das_tickbox":"0","publication":"Mathematical Models and Methods in Applied Sciences","doi":"10.1142/S0218202526410010","publication_identifier":{"eissn":["1793-6314"],"issn":["0218-2025"]},"issue":"6","researchdata_availability":"no","date_created":"2026-03-29T22:07:08Z","year":"2026","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2507.11387","open_access":"1"}],"quality_controlled":"1","supplementarymaterial":"no","mathsc":["35B40","35L60","35K55","35Q70","35Q91","35Q92"],"OA_place":"repository","volume":36,"author":[{"full_name":"Auricchio, Gennaro","first_name":"Gennaro","last_name":"Auricchio"},{"id":"63ff57e8-1fbb-11ee-88f2-f558ffc59cf1","full_name":"Brigati, Giovanni","first_name":"Giovanni","last_name":"Brigati"},{"first_name":"Paolo","last_name":"Giudici","full_name":"Giudici, Paolo"},{"first_name":"Giuseppe","last_name":"Toscani","full_name":"Toscani, Giuseppe"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","title":"From kinetic theory to AI: A rediscovery of high-dimensional divergences and their properties","external_id":{"arxiv":["2507.11387"]},"publication_status":"published","abstract":[{"text":"Selecting an appropriate divergence measure is a critical aspect of machine learning, as it directly impacts model performance. Among the most widely used, we find the Kullback–Leibler (KL) divergence, originally introduced in kinetic theory as a measure of relative entropy between probability distributions. Just as in machine learning, the ability to quantify the proximity of probability distributions plays a central role in kinetic theory. In this paper, we present a comparative review of divergence measures rooted in kinetic theory, highlighting their theoretical foundations and exploring their potential applications in machine learning and artificial intelligence.","lang":"eng"}],"article_processing_charge":"No","page":"1185-1233","status":"public","day":"01","OA_type":"green","ec_funded":1,"project":[{"name":"IST-BRIDGE: International postdoctoral program","call_identifier":"H2020","grant_number":"101034413","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c"}],"citation":{"mla":"Auricchio, Gennaro, et al. “From Kinetic Theory to AI: A Rediscovery of High-Dimensional Divergences and Their Properties.” <i>Mathematical Models and Methods in Applied Sciences</i>, vol. 36, no. 6, World Scientific Publishing, 2026, pp. 1185–233, doi:<a href=\"https://doi.org/10.1142/S0218202526410010\">10.1142/S0218202526410010</a>.","chicago":"Auricchio, Gennaro, Giovanni Brigati, Paolo Giudici, and Giuseppe Toscani. “From Kinetic Theory to AI: A Rediscovery of High-Dimensional Divergences and Their Properties.” <i>Mathematical Models and Methods in Applied Sciences</i>. World Scientific Publishing, 2026. <a href=\"https://doi.org/10.1142/S0218202526410010\">https://doi.org/10.1142/S0218202526410010</a>.","apa":"Auricchio, G., Brigati, G., Giudici, P., &#38; Toscani, G. (2026). From kinetic theory to AI: A rediscovery of high-dimensional divergences and their properties. <i>Mathematical Models and Methods in Applied Sciences</i>. World Scientific Publishing. <a href=\"https://doi.org/10.1142/S0218202526410010\">https://doi.org/10.1142/S0218202526410010</a>","ama":"Auricchio G, Brigati G, Giudici P, Toscani G. From kinetic theory to AI: A rediscovery of high-dimensional divergences and their properties. <i>Mathematical Models and Methods in Applied Sciences</i>. 2026;36(6):1185-1233. doi:<a href=\"https://doi.org/10.1142/S0218202526410010\">10.1142/S0218202526410010</a>","ista":"Auricchio G, Brigati G, Giudici P, Toscani G. 2026. From kinetic theory to AI: A rediscovery of high-dimensional divergences and their properties. Mathematical Models and Methods in Applied Sciences. 36(6), 1185–1233.","short":"G. Auricchio, G. Brigati, P. Giudici, G. Toscani, Mathematical Models and Methods in Applied Sciences 36 (2026) 1185–1233.","ieee":"G. Auricchio, G. Brigati, P. Giudici, and G. Toscani, “From kinetic theory to AI: A rediscovery of high-dimensional divergences and their properties,” <i>Mathematical Models and Methods in Applied Sciences</i>, vol. 36, no. 6. World Scientific Publishing, pp. 1185–1233, 2026."},"scopus_import":"1","_id":"21504","acknowledgement":"This work has been written within the activities of GNCS and GNFM groups of INdAM (Italian\r\nNational Institute of High Mathematics). G.B. has been funded by the European Union’s Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No 101034413. P.G. has been funded by the European Union - NextGenerationEU, in the framework of the GRINSGrowing Resilient, INclusive and Sustainable (GRINS PE00000018).","type":"journal_article","intvolume":"        36","oa_version":"Preprint","article_type":"original","date_updated":"2026-07-27T12:11:38Z","arxiv":1,"department":[{"_id":"JaMa"}],"publisher":"World Scientific Publishing","date_published":"2026-06-01T00:00:00Z","month":"06","language":[{"iso":"eng"}],"oa":1},{"file":[{"file_size":2960392,"date_updated":"2026-07-27T12:28:27Z","relation":"main_file","checksum":"bb28ed456cdd288d97854b084dd4b2e1","access_level":"open_access","file_id":"22429","creator":"dernst","success":1,"file_name":"2026_NaturePhysics_Grober.pdf","content_type":"application/pdf","date_created":"2026-07-27T12:28:27Z"}],"quality_controlled":"1","corr_author":"1","supplementarymaterial":"yes","ddc":["570","530"],"has_accepted_license":"1","researchdata_availability":"yes","year":"2026","date_created":"2026-04-12T22:01:51Z","publication":"Nature Physics","das_tickbox":"1","doi":"10.1038/s41567-026-03189-4","dataavailabilitystatement":"The datasets generated and analysed during the current study are openly available via Zenodo at https://doi.org/10.5281/zenodo.15236674 (ref. 32). All data are released under the CC-BY 4.0 licence. For any further questions about data access or reuse, please contact the corresponding author.","publication_identifier":{"issn":["1745-2473"],"eissn":["1745-2481"]},"abstract":[{"text":"Swimming bacteria move through a fluid by actuating their moving body parts. They are force-free and can be described as hydrodynamic force dipoles: pushers or pullers. This modelling description is broadly used in biological physics and active matter research, and it has successfully predicted, for example, the superfluid behaviour of suspensions of pushers or the bend instability and emergence of turbulent flows in active nematics. However, this description accounts only for the translational motion of the swimming body and neglects the effects of hydrodynamic torque dipoles, which are relevant to bacteria with rotary motor-driven flagella, such as swimming Escherichia coli. Here we show that the torque dipole of confined swimming E. coli can power the persistent rotation of symmetric discs. The torque dipole leads to a traction force on the discs, an additive mechanism that is both contactless and independent of the orientation of the bacteria. Our results indicate that the torque dipole of swimming E. coli is notable in confined geometries, which is relevant to bacterial transport through porous materials, biofilms and the development of chiral fluids.","lang":"eng"}],"external_id":{"pmid":["42006933"]},"publication_status":"published","page":"620-627","article_processing_charge":"Yes (via OA deal)","title":"The hydrodynamic torque dipole from rotary bacterial flagella powers symmetric discs","volume":22,"OA_place":"publisher","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"id":"c692f879-718d-11ee-81f0-da7caa79c783","full_name":"Grober, Daniel B","first_name":"Daniel B","last_name":"Grober"},{"full_name":"Dhar, Tanumoy","last_name":"Dhar","first_name":"Tanumoy"},{"first_name":"David","last_name":"Saintillan","full_name":"Saintillan, David"},{"last_name":"Palacci","first_name":"Jérémie A","full_name":"Palacci, Jérémie A","orcid":"0000-0002-7253-9465","id":"8fb92548-2b22-11eb-b7c1-a3f0d08d7c7d"}],"pmid":1,"acknowledged_ssus":[{"_id":"NanoFab"},{"_id":"EM-Fac"}],"project":[{"name":"VULCAN: matter, powered from within","grant_number":"101086998","_id":"bdac72da-d553-11ed-ba76-eae56e802b74"}],"PlanS_conform":"1","citation":{"short":"D.B. Grober, T. Dhar, D. Saintillan, J.A. Palacci, Nature Physics 22 (2026) 620–627.","ieee":"D. B. Grober, T. Dhar, D. Saintillan, and J. A. Palacci, “The hydrodynamic torque dipole from rotary bacterial flagella powers symmetric discs,” <i>Nature Physics</i>, vol. 22. Springer Nature, pp. 620–627, 2026.","ista":"Grober DB, Dhar T, Saintillan D, Palacci JA. 2026. The hydrodynamic torque dipole from rotary bacterial flagella powers symmetric discs. Nature Physics. 22, 620–627.","ama":"Grober DB, Dhar T, Saintillan D, Palacci JA. The hydrodynamic torque dipole from rotary bacterial flagella powers symmetric discs. <i>Nature Physics</i>. 2026;22:620-627. doi:<a href=\"https://doi.org/10.1038/s41567-026-03189-4\">10.1038/s41567-026-03189-4</a>","chicago":"Grober, Daniel B, Tanumoy Dhar, David Saintillan, and Jérémie A Palacci. “The Hydrodynamic Torque Dipole from Rotary Bacterial Flagella Powers Symmetric Discs.” <i>Nature Physics</i>. Springer Nature, 2026. <a href=\"https://doi.org/10.1038/s41567-026-03189-4\">https://doi.org/10.1038/s41567-026-03189-4</a>.","apa":"Grober, D. B., Dhar, T., Saintillan, D., &#38; Palacci, J. A. (2026). The hydrodynamic torque dipole from rotary bacterial flagella powers symmetric discs. <i>Nature Physics</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41567-026-03189-4\">https://doi.org/10.1038/s41567-026-03189-4</a>","mla":"Grober, Daniel B., et al. “The Hydrodynamic Torque Dipole from Rotary Bacterial Flagella Powers Symmetric Discs.” <i>Nature Physics</i>, vol. 22, Springer Nature, 2026, pp. 620–27, doi:<a href=\"https://doi.org/10.1038/s41567-026-03189-4\">10.1038/s41567-026-03189-4</a>."},"OA_type":"hybrid","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"day":"01","status":"public","oa":1,"file_date_updated":"2026-07-27T12:28:27Z","department":[{"_id":"JePa"}],"publisher":"Springer Nature","date_updated":"2026-07-27T12:29:45Z","language":[{"iso":"eng"}],"month":"04","date_published":"2026-04-01T00:00:00Z","type":"journal_article","acknowledgement":"We thank E. Krasnopeeva for help with the bacterial culture, motility and genetic engineering. We thank Q. Martinet for help with the experimental design, F. Pertl for atomic force microscopy measurements and S. Hajek for the scanning electron microscopy imaging. This project has received funding from the European Research Council under the European Union’s Horizon Europe research and innovation programme (VULCAN, 101086998). The views and opinions expressed are, however, those of the authors only and do not necessarily reflect those of the European Union or the European Research Council Executive Agency. Neither the European Union nor the granting authority can be held responsible for them. J.P. thanks the Nanofabrication and Electron Microscopy Shared Scientific Units of ISTA for support. Open access funding provided by Institute of Science and Technology (IST Austria).","article_type":"original","intvolume":"        22","oa_version":"Published Version","_id":"21721","scopus_import":"1"},{"status":"public","day":"01","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"OA_type":"hybrid","citation":{"short":"H. NAGAI, X. Feng, Current Opinion in Plant Biology 91 (2026).","ieee":"H. NAGAI and X. Feng, “Genetic and epigenetic mechanisms underlying male reproductive thermotolerance,” <i>Current Opinion in Plant Biology</i>, vol. 91, no. 6. Elsevier, 2026.","ama":"NAGAI H, Feng X. Genetic and epigenetic mechanisms underlying male reproductive thermotolerance. <i>Current Opinion in Plant Biology</i>. 2026;91(6). doi:<a href=\"https://doi.org/10.1016/j.pbi.2026.102881\">10.1016/j.pbi.2026.102881</a>","ista":"NAGAI H, Feng X. 2026. Genetic and epigenetic mechanisms underlying male reproductive thermotolerance. Current Opinion in Plant Biology. 91(6), 102881.","apa":"NAGAI, H., &#38; Feng, X. (2026). Genetic and epigenetic mechanisms underlying male reproductive thermotolerance. <i>Current Opinion in Plant Biology</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.pbi.2026.102881\">https://doi.org/10.1016/j.pbi.2026.102881</a>","chicago":"NAGAI, HIROKI, and Xiaoqi Feng. “Genetic and Epigenetic Mechanisms Underlying Male Reproductive Thermotolerance.” <i>Current Opinion in Plant Biology</i>. Elsevier, 2026. <a href=\"https://doi.org/10.1016/j.pbi.2026.102881\">https://doi.org/10.1016/j.pbi.2026.102881</a>.","mla":"NAGAI, HIROKI, and Xiaoqi Feng. “Genetic and Epigenetic Mechanisms Underlying Male Reproductive Thermotolerance.” <i>Current Opinion in Plant Biology</i>, vol. 91, no. 6, 102881, Elsevier, 2026, doi:<a href=\"https://doi.org/10.1016/j.pbi.2026.102881\">10.1016/j.pbi.2026.102881</a>."},"PlanS_conform":"1","scopus_import":"1","_id":"21716","type":"journal_article","acknowledgement":"This work was supported by JSPS KAKENHI (grant number JP22J01430) and the Osamu Hayaishi Memorial Scholarship for Study Abroad for H.N.","oa_version":"Published Version","intvolume":"        91","article_type":"original","date_updated":"2026-07-27T12:26:03Z","publisher":"Elsevier","department":[{"_id":"XiFe"}],"date_published":"2026-06-01T00:00:00Z","month":"06","language":[{"iso":"eng"}],"file_date_updated":"2026-07-27T12:20:55Z","oa":1,"das_tickbox":"1","publication":"Current Opinion in Plant Biology","dataavailabilitystatement":"No data was used for the research described in the article.","publication_identifier":{"eissn":["1879-0356"],"issn":["1369-5266"]},"doi":"10.1016/j.pbi.2026.102881","issue":"6","article_number":"102881","researchdata_availability":"no","date_created":"2026-04-12T22:01:50Z","year":"2026","ddc":["580"],"has_accepted_license":"1","file":[{"creator":"dernst","success":1,"date_created":"2026-07-27T12:20:55Z","content_type":"application/pdf","file_name":"2026_CurrentOpinionPlantBiology_Nagai.pdf","relation":"main_file","checksum":"929e801eb8f2aef08cf9d9f97be2b2af","access_level":"open_access","file_size":2255022,"date_updated":"2026-07-27T12:20:55Z","file_id":"22428"}],"quality_controlled":"1","supplementarymaterial":"no","corr_author":"1","pmid":1,"volume":91,"OA_place":"publisher","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"last_name":"Nagai","first_name":"Hiroki","full_name":"Nagai, Hiroki","orcid":"0000-0003-1671-9434","id":"608df3e6-e2ab-11ed-8890-c9318cec7da4"},{"orcid":"0000-0002-4008-1234","id":"e0164712-22ee-11ed-b12a-d80fcdf35958","full_name":"Feng, Xiaoqi","first_name":"Xiaoqi","last_name":"Feng"}],"title":"Genetic and epigenetic mechanisms underlying male reproductive thermotolerance","publication_status":"published","external_id":{"pmid":["41955759"]},"abstract":[{"lang":"eng","text":"Male germline development in plants is highly sensitive to heat stress, with elevated temperatures frequently impairing male fertility and consequently reducing seed production. Indeed, recent global warming has decreased major crop yields, emphasizing the urgent need to elucidate the molecular and cellular mechanisms underlying heat-induced male sterility. This review synthesizes current knowledge on how heat stress disrupts microsporogenesis and microgametogenesis, and how plants counteract these stresses through diverse thermotolerance mechanisms. We emphasize temperature-sensitive processes, including meiotic progression in male germ cells, programmed cell death of somatic tapetal nurse cells, and post-meiotic pollen tube development. We further discuss how epigenetic regulators enhance thermotolerance by reprogramming DNA methylation landscapes and modulating histone variant distribution. Finally, we propose future directions aimed at understanding the mechanisms of reproductive thermotolerance from the epigenetic perspective."}],"article_processing_charge":"Yes (via OA deal)"},{"date_updated":"2026-07-27T12:32:56Z","publisher":"Springer Nature","department":[{"_id":"DeBa"}],"arxiv":1,"date_published":"2026-06-01T00:00:00Z","language":[{"iso":"eng"}],"month":"06","oa":1,"scopus_import":"1","_id":"21726","acknowledgement":"We thank K. Burch, M. Buzzi, P. Cappellaro, A. Cavalleri, E. Demler, M. Eckstein, T. Giamarchi, D. Hsieh, H. Okamoto, D. Reis, T. Tohyama, P. Werner and A. Yacoby for insightful discussions. We thank B. Baxley for assistance with graphics. This work was primarily supported by the US Department of Energy, Office of Basic Energy Sciences, Early Career Award Program, under award no. DE-SC0022883 (D.R.B., F.G., T.M. and M.M.) and award no. DE-SC0024494 (D.C. and M.C.). D.C. and P.B.M.D.O. acknowledge funding from the NSF GRFP under grant nos. DGE-1845298 and DGE 2140743, respectively. The work performed at Brookhaven National Laboratory was supported by the US Department of Energy, Division of Materials Science, under contract no. DE-SC0012704. We acknowledge funding from the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – 531215165 (Research Unit “OPTIMAL’). This work was supported by the Cluster of Excellence ‘Advanced Imaging of Matter’ (AIM) and the Max Planck-New York City Center for Non-Equilibrium Quantum Phenomena. The Flatiron Institute is a division of the Simons Foundation. Simulations were performed with computing resources granted by RWTH Aachen University under projects rwth0752 and rwth1258. We acknowledge computing time on the supercomputer JURECA52 at Forschungszentrum Jülich under the project ID enhancerg.","type":"journal_article","intvolume":"        25","oa_version":"Preprint","article_type":"original","citation":{"mla":"Baykusheva, Denitsa Rangelova, et al. “Quantum Control of Hubbard Excitons.” <i>Nature Materials</i>, vol. 25, Springer Nature, 2026, pp. 937–43, doi:<a href=\"https://doi.org/10.1038/s41563-026-02517-6\">10.1038/s41563-026-02517-6</a>.","chicago":"Baykusheva, Denitsa Rangelova, Deven Carmichael, Clara S. Weber, I. Te Lu, Filippo Glerean, Tepie Meng, Pedro B.M. De Oliveira, et al. “Quantum Control of Hubbard Excitons.” <i>Nature Materials</i>. Springer Nature, 2026. <a href=\"https://doi.org/10.1038/s41563-026-02517-6\">https://doi.org/10.1038/s41563-026-02517-6</a>.","apa":"Baykusheva, D. R., Carmichael, D., Weber, C. S., Lu, I. T., Glerean, F., Meng, T., … Mitrano, M. (2026). Quantum control of Hubbard excitons. <i>Nature Materials</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41563-026-02517-6\">https://doi.org/10.1038/s41563-026-02517-6</a>","ista":"Baykusheva DR, Carmichael D, Weber CS, Lu IT, Glerean F, Meng T, De Oliveira PBM, Homes CC, Zaliznyak IA, Gu GD, Dean MPM, Rubio A, Kennes DM, Claassen M, Mitrano M. 2026. Quantum control of Hubbard excitons. Nature Materials. 25, 937–943.","ama":"Baykusheva DR, Carmichael D, Weber CS, et al. Quantum control of Hubbard excitons. <i>Nature Materials</i>. 2026;25:937-943. doi:<a href=\"https://doi.org/10.1038/s41563-026-02517-6\">10.1038/s41563-026-02517-6</a>","ieee":"D. R. Baykusheva <i>et al.</i>, “Quantum control of Hubbard excitons,” <i>Nature Materials</i>, vol. 25. Springer Nature, pp. 937–943, 2026.","short":"D.R. Baykusheva, D. Carmichael, C.S. Weber, I.T. Lu, F. Glerean, T. Meng, P.B.M. De Oliveira, C.C. Homes, I.A. Zaliznyak, G.D. Gu, M.P.M. Dean, A. Rubio, D.M. Kennes, M. Claassen, M. Mitrano, Nature Materials 25 (2026) 937–943."},"status":"public","day":"01","OA_type":"green","title":"Quantum control of Hubbard excitons","publication_status":"published","external_id":{"arxiv":["2601.20695 "]},"abstract":[{"lang":"eng","text":"Quantum control of the many-body wavefunction is a central challenge in quantum materials research, as it could yield a precise control knob to manipulate emergent phenomena. Floquet engineering, the coherent dressing of quantum states with periodic non-resonant optical fields, has become an important strategy for quantum control. Most applications to solid-state systems have targeted weakly interacting or single-ion states, leaving the manipulation of many-body wavefunctions largely unexplored. Here we use Floquet engineering to achieve quantum control of a strongly correlated Hubbard exciton in the one-dimensional Mott insulator Sr2CuO3. A non-resonant mid-infrared optical field coherently dresses the exciton wavefunction, driving its rotation between bright and dark states. We use resonant third-harmonic generation to quantify ultrafast π/2 rotations on the Bloch sphere spanned by these exciton states. Our work advances the quest towards programmable control of correlated states and exciton-based quantum sensing."}],"article_processing_charge":"No","page":"937-943","related_material":{"link":[{"relation":"erratum","url":"https://doi.org/10.1038/s41563-026-02697-1"}]},"volume":25,"OA_place":"repository","author":[{"first_name":"Denitsa Rangelova","last_name":"Baykusheva","id":"71b4d059-2a03-11ee-914d-dfa3beed6530","orcid":"0000-0002-7438-1139","full_name":"Baykusheva, Denitsa Rangelova"},{"full_name":"Carmichael, Deven","first_name":"Deven","last_name":"Carmichael"},{"full_name":"Weber, Clara S.","first_name":"Clara S.","last_name":"Weber"},{"full_name":"Lu, I. Te","last_name":"Lu","first_name":"I. Te"},{"full_name":"Glerean, Filippo","last_name":"Glerean","first_name":"Filippo"},{"first_name":"Tepie","last_name":"Meng","full_name":"Meng, Tepie"},{"full_name":"De Oliveira, Pedro B.M.","first_name":"Pedro B.M.","last_name":"De Oliveira"},{"full_name":"Homes, Christopher C.","first_name":"Christopher C.","last_name":"Homes"},{"full_name":"Zaliznyak, Igor A.","last_name":"Zaliznyak","first_name":"Igor A."},{"full_name":"Gu, G. D.","first_name":"G. D.","last_name":"Gu"},{"first_name":"Mark P.M.","last_name":"Dean","full_name":"Dean, Mark P.M."},{"first_name":"Angel","last_name":"Rubio","full_name":"Rubio, Angel"},{"first_name":"Dante M.","last_name":"Kennes","full_name":"Kennes, Dante M."},{"first_name":"Martin","last_name":"Claassen","full_name":"Claassen, Martin"},{"full_name":"Mitrano, Matteo","first_name":"Matteo","last_name":"Mitrano"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2601.20695"}],"quality_controlled":"1","supplementarymaterial":"yes","corr_author":"1","das_tickbox":"1","publication":"Nature Materials","publication_identifier":{"eissn":["1476-4660"],"issn":["1476-1122"]},"doi":"10.1038/s41563-026-02517-6","dataavailabilitystatement":"The data that support the findings of this study are present in the Article and its Supplementary Information. Source data for Figs. 1–4 are available via Figshare at https://doi.org/10.6084/m9.figshare.31146367 (ref. 51). Any additional data are available from the corresponding authors upon request.","researchdata_availability":"upon request","date_created":"2026-04-12T22:01:53Z","year":"2026"},{"OA_type":"closed access","status":"public","day":"06","citation":{"ama":"Mondal M, Ghorai P, Samadder A, Freunberger SA, Banerjee P. H2O2 responsive rhodamine-based probe for monitoring early-stage diabetes diagnosis. <i>Journal of Materials Chemistry B</i>. 2026;14(17):5314-5322. doi:<a href=\"https://doi.org/10.1039/d5tb02687c\">10.1039/d5tb02687c</a>","ista":"Mondal M, Ghorai P, Samadder A, Freunberger SA, Banerjee P. 2026. H2O2 responsive rhodamine-based probe for monitoring early-stage diabetes diagnosis. Journal of Materials Chemistry B. 14(17), 5314–5322.","ieee":"M. Mondal, P. Ghorai, A. Samadder, S. A. Freunberger, and P. Banerjee, “H2O2 responsive rhodamine-based probe for monitoring early-stage diabetes diagnosis,” <i>Journal of Materials Chemistry B</i>, vol. 14, no. 17. Royal Society of Chemistry, pp. 5314–5322, 2026.","short":"M. Mondal, P. Ghorai, A. Samadder, S.A. Freunberger, P. Banerjee, Journal of Materials Chemistry B 14 (2026) 5314–5322.","mla":"Mondal, Moumita, et al. “H2O2 Responsive Rhodamine-Based Probe for Monitoring Early-Stage Diabetes Diagnosis.” <i>Journal of Materials Chemistry B</i>, vol. 14, no. 17, Royal Society of Chemistry, 2026, pp. 5314–22, doi:<a href=\"https://doi.org/10.1039/d5tb02687c\">10.1039/d5tb02687c</a>.","apa":"Mondal, M., Ghorai, P., Samadder, A., Freunberger, S. A., &#38; Banerjee, P. (2026). H2O2 responsive rhodamine-based probe for monitoring early-stage diabetes diagnosis. <i>Journal of Materials Chemistry B</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/d5tb02687c\">https://doi.org/10.1039/d5tb02687c</a>","chicago":"Mondal, Moumita, Pravat Ghorai, Asmita Samadder, Stefan Alexander Freunberger, and Priyabrata Banerjee. “H2O2 Responsive Rhodamine-Based Probe for Monitoring Early-Stage Diabetes Diagnosis.” <i>Journal of Materials Chemistry B</i>. Royal Society of Chemistry, 2026. <a href=\"https://doi.org/10.1039/d5tb02687c\">https://doi.org/10.1039/d5tb02687c</a>."},"acknowledgement":"MM acknowledges the Government of India for DST-INSPIRE\r\nfellowship [IF200389] and Federal Ministry of Education, Science and Research (BMBWF) and the OeAD – Austria’s Agency for Education and Internationalisation for an Ernst Mach Grant, weltweit (grant number MPC-2024-01518) for research internship at ISTA. The Scientific Service Units of ISTA supported this research through resources provided by the Lab Support Facility. PG acknowledges the ANRF, India, for his NPDF fellowship (File no. PDF/2022/001960). PB acknowledges ANRF, India, for the SERB-CRG sponsored project GAP-240712 (vide reference no. CRG/2022/001679).","type":"journal_article","oa_version":"None","intvolume":"        14","article_type":"original","scopus_import":"1","_id":"21730","date_updated":"2026-07-27T12:36:05Z","department":[{"_id":"StFr"}],"publisher":"Royal Society of Chemistry","date_published":"2026-05-06T00:00:00Z","month":"05","language":[{"iso":"eng"}],"researchdata_availability":"yes","date_created":"2026-04-13T07:45:26Z","year":"2026","das_tickbox":"1","publication":"Journal of Materials Chemistry B","doi":"10.1039/d5tb02687c","publication_identifier":{"issn":["2050-750X"],"eissn":["2050-7518"]},"dataavailabilitystatement":"The data supporting this article have been included as part of the supplementary information (SI). The supplementary information includes all spectral profiles, plots and tabulated data. See DOI: https://doi.org/10.1039/d5tb02687c.","issue":"17","quality_controlled":"1","supplementarymaterial":"yes","corr_author":"1","volume":14,"author":[{"first_name":"Moumita","last_name":"Mondal","full_name":"Mondal, Moumita"},{"full_name":"Ghorai, Pravat","first_name":"Pravat","last_name":"Ghorai"},{"full_name":"Samadder, Asmita","last_name":"Samadder","first_name":"Asmita"},{"id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","orcid":"0000-0003-2902-5319","full_name":"Freunberger, Stefan Alexander","first_name":"Stefan Alexander","last_name":"Freunberger"},{"last_name":"Banerjee","first_name":"Priyabrata","full_name":"Banerjee, Priyabrata"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","pmid":1,"acknowledged_ssus":[{"_id":"LifeSc"}],"publication_status":"published","external_id":{"pmid":["41958432"]},"abstract":[{"text":"Hydrogen peroxide (H2O2) is a crucial member of the reactive oxygen species (ROS) family, playing roles in cellular signalling and immune responses in human health. Moreover, it is a potential biomarker of diabetes when present in aberrant concentrations. Therefore, monitoring trace levels of H2O2 has become a research hotspot for analytical and sensor chemists. In this context, we report a rhodamine-based fluorescent probe (RN), which shows excellent fluorescent enhancement at 555 nm upon the addition of H2O2 along with a low limit of detection (LOD) of 0.67 ppm and fast response (∼2 min). The probe is highly selective for H2O2, showing no fluorescence enhancement with other ROS. RN is synthesised in a one-pot chemical reaction using rhodamine 6G (R6G) and 4,7,10-trioxa-1,13-tridecanediamine (TTDA). H2O2 detection in pre-treated milk samples proves its real-world viability. We found that RN shows low cytotoxicity, which allowed us to successfully explore its potential to monitor H2O2 generation in a diabetic L929 skin cell line and diabetic mice liver tissue. This result demonstrates promising features for assessing early diabetic progression through fluorescence imaging.","lang":"eng"}],"article_processing_charge":"No","page":"5314-5322","title":"H2O2 responsive rhodamine-based probe for monitoring early-stage diabetes diagnosis"},{"author":[{"last_name":"Iofinova","first_name":"Eugenia B","id":"f9a17499-f6e0-11ea-865d-fdf9a3f77117","orcid":"0000-0002-7778-3221","full_name":"Iofinova, Eugenia B"}],"user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","OA_place":"publisher","acknowledged_ssus":[{"_id":"ScienComp"}],"related_material":{"record":[{"status":"public","id":"14771","relation":"part_of_dissertation"},{"status":"public","id":"18121","relation":"part_of_dissertation"},{"status":"public","relation":"part_of_dissertation","id":"21858"},{"status":"public","id":"21859","relation":"part_of_dissertation"},{"id":"21857","relation":"part_of_dissertation","status":"public"}]},"page":"237","article_processing_charge":"No","abstract":[{"lang":"eng","text":"As neural-network-based models grow both in size and popularity, interest has grown in making the models smaller and more efficient to train. To that end, many methods have been proposed to prune models by reducing their number of nonzero parameters. Additionally, parameter-efficient fine-tuning, in which a much smaller number of parameters than the total contained in the model is updated during training, has become very popular, especially in the space of Large Language Models. At the same time, the increasingly routine deployment of machine learning in real-world applications has spurred a drive to make them more trustworthy - in the sense of, among other things, being unbiased, interpretable, and editable. In this thesis, we examine the interplay between efficiency and trustworthiness.\r\n\r\nFirst, we analyze the effects of model pruning on bias in computer vision models, demonstrating that increased sparsity leads to greater bias, largely as a function of increased model uncertainty in marginal cases. Based on this observation, we propose several bias mitigation techniques. Then, we demonstrate that example-specific model pruning can improve model interpretation methods while improving pruning efficiency to make example-specific model pruning feasible in real time. Then, we investigate the effectiveness of parameter-efficient and data-efficient model personalization via fine-tuning, demonstrating that it is highly feasible with very small computational and data resources. Finally, we consider efficiency in editing model knowledge using a custom synthetic data framework, demonstrating that parameter-efficient, low-rank fine-tuning frequently outperforms full-rank fine-tuning, and, additionally, that restricting which model blocks are fine-tuned frequently improves results. Together, the results in this thesis provide new insights and techniques for combining trustworthiness and efficiency during neural network inference and training.\r\n\r\n"}],"publication_status":"published","degree_awarded":"PhD","title":"On the utility and effects of efficiency in artificial neural networks","doi_confirm":"1","supervisor":[{"full_name":"Alistarh, Dan-Adrian","id":"4A899BFC-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-3650-940X","last_name":"Alistarh","first_name":"Dan-Adrian"}],"year":"2026","date_created":"2026-05-11T08:43:22Z","doi":"10.15479/AT-ISTA-21854","publication_identifier":{"issn":["2663-337X"]},"das_tickbox":"1","corr_author":"1","file":[{"creator":"eiofinov","date_created":"2026-05-11T08:36:01Z","content_type":"application/zip","file_name":"EIofinova_thesis_FinalVersion.zip","checksum":"2e148dad920e3f9b7c32796e0ba2e5f7","relation":"source_file","access_level":"closed","file_size":28479571,"date_updated":"2026-05-11T08:36:01Z","file_id":"21856"},{"file_name":"2026_Iofinova_Eugenia_Thesis.pdf","content_type":"application/pdf","date_created":"2026-05-13T13:10:48Z","success":1,"creator":"eiofinov","file_id":"21877","file_size":18137757,"date_updated":"2026-05-13T13:10:48Z","access_level":"open_access","checksum":"b10c2933f386f532b2dbf28b19c5525c","relation":"main_file"}],"has_accepted_license":"1","ddc":["000"],"oa_version":"Published Version","acknowledgement":"The research in this Ph.D. was funded in whole\r\nor in part by the Austrian Science Fund (FWF) W1260-N35 (Vienna Graduate School for\r\nComputational Optimization). For open access purposes the author has applied a CC BY\r\npublic copyright license to any author accepted manuscript version arising from this submission\r\nwherever possible. Additionally, I am grateful to Alois Schlögl, Waleed Khalid, and the rest of\r\nthe ISTA Scientific Computing team for building and maintaining the infrastructure I used\r\nto run experiments. I’m also deeply grateful to the Alistarh group’s administrative assistant,\r\nChristine Francois, who always deals with our nonsense with common sense and a smile.\r\n","type":"dissertation","_id":"21854","oa":1,"file_date_updated":"2026-05-13T13:10:48Z","month":"05","language":[{"iso":"eng"}],"date_published":"2026-05-11T00:00:00Z","department":[{"_id":"GradSch"},{"_id":"DaAl"}],"publisher":"Institute of Science and Technology Austria","date_updated":"2026-07-27T12:50:04Z","publisher_comment":"In reference to IEEE copyrighted material which is used with permission in this thesis, the IEEE does not endorse any of ISTA's products or services. Internal or personal use of this material is permitted. If interested in reprinting/republishing IEEE copyrighted material for advertising or promotional purposes or for creating new collective works for resale or redistribution, please go to http://www.ieee.org/publications_standards/publications/rights/rights_link.html to learn how to obtain a License from RightsLink. If applicable, University Microfilms and/or ProQuest Library, or the Archives of Canada may supply single copies of the dissertation.","alternative_title":["ISTA Thesis"],"day":"11","status":"public","citation":{"short":"E.B. Iofinova, On the Utility and Effects of Efficiency in Artificial Neural Networks, Institute of Science and Technology Austria, 2026.","ieee":"E. B. Iofinova, “On the utility and effects of efficiency in artificial neural networks,” Institute of Science and Technology Austria, 2026.","ama":"Iofinova EB. On the utility and effects of efficiency in artificial neural networks. 2026. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-21854\">10.15479/AT-ISTA-21854</a>","ista":"Iofinova EB. 2026. On the utility and effects of efficiency in artificial neural networks. Institute of Science and Technology Austria.","chicago":"Iofinova, Eugenia B. “On the Utility and Effects of Efficiency in Artificial Neural Networks.” Institute of Science and Technology Austria, 2026. <a href=\"https://doi.org/10.15479/AT-ISTA-21854\">https://doi.org/10.15479/AT-ISTA-21854</a>.","apa":"Iofinova, E. B. (2026). <i>On the utility and effects of efficiency in artificial neural networks</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-21854\">https://doi.org/10.15479/AT-ISTA-21854</a>","mla":"Iofinova, Eugenia B. <i>On the Utility and Effects of Efficiency in Artificial Neural Networks</i>. Institute of Science and Technology Austria, 2026, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-21854\">10.15479/AT-ISTA-21854</a>."},"project":[{"name":"Vienna Graduate School on Computational Optimization","_id":"9B9290DE-BA93-11EA-9121-9846C619BF3A","grant_number":"W1260-N35"}]},{"article_processing_charge":"No","abstract":[{"text":"The availability of powerful open-source large language models (LLMs) opens exciting use cases, such as using personal data to fine-tune these models to imitate a user’s unique writing style. Two key requirements for this functionality are personalization–in the sense that the output should recognizably reflect the user’s own writing style—and privacy–users may justifiably be wary of uploading extremely personal data, such as their email archive, to a third-party service. In this paper, we demonstrate the feasibility of training and running such an assistant, which we call Panza, on commodity hardware, for the specific use case of email generation. Panza’s personalization features are based on a combination of parameter-efficient fine-tuning using a variant of the Reverse Instructions technique [1] and Retrieval-Augmented Generation (RAG) [2]. We demonstrate that this combination allows us to fine-tune an LLM to reflect a user’s writing style using limited data, while executing on extremely limited resources, e.g. on a free Google Colab instance. Our key methodological contribution is the first detailed study of evaluation metrics for this task, and\r\nof how different choices of system components–the use of RAG and of different fine-tuning approaches–impact the system’s performance. Additionally, we demonstrate that very little data - under 100 email samples - are sufficient to create models that convincingly imitate humans, showcasing a previously unknown attack vector in language models. We are releasing the full Panza code as well as three new email datasets licensed for research use.","lang":"eng"}],"publication_status":"published","title":"Panza: Investigating the feasibility of fully-local personalized text generation","keyword":["LLMs","PEFT","LoRA","personalization","efficient ML"],"user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","author":[{"full_name":"Nicolicioiu, Armand","first_name":"Armand","last_name":"Nicolicioiu"},{"orcid":"0000-0002-7778-3221","id":"f9a17499-f6e0-11ea-865d-fdf9a3f77117","full_name":"Iofinova, Eugenia B","first_name":"Eugenia B","last_name":"Iofinova"},{"last_name":"Jovanovic","first_name":"Andrej","full_name":"Jovanovic, Andrej"},{"full_name":"Kurtic, Eldar","id":"47beb3a5-07b5-11eb-9b87-b108ec578218","last_name":"Kurtic","first_name":"Eldar"},{"full_name":"Nikdan, Mahdi","id":"66374281-f394-11eb-9cf6-869147deecc0","first_name":"Mahdi","last_name":"Nikdan"},{"id":"2c18daae-4dbe-11ef-8491-98ce2d960f09","full_name":"Panferov, Andrei","last_name":"Panferov","first_name":"Andrei"},{"last_name":"Markov","first_name":"Ilia","full_name":"Markov, Ilia","id":"D0CF4148-C985-11E9-8066-0BDEE5697425"},{"full_name":"Shavit, Nir","first_name":"Nir","last_name":"Shavit"},{"last_name":"Alistarh","first_name":"Dan-Adrian","full_name":"Alistarh, Dan-Adrian","id":"4A899BFC-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-3650-940X"}],"OA_place":"publisher","related_material":{"record":[{"relation":"dissertation_contains","id":"21854","status":"public"}]},"corr_author":"1","quality_controlled":"1","main_file_link":[{"url":"https://openreview.net/pdf?id=soFWnTqd23","open_access":"1"}],"conference":{"end_date":"2026-03-26","location":"Tübíngen, Germany","start_date":"2026-03-23","name":"CPAL: Conference on Parsimony and Learning"},"year":"2026","date_created":"2026-05-11T08:50:28Z","article_number":"81","publication":"Third Conference on Parsimony and Learning (Proceedings Track)","oa":1,"language":[{"iso":"eng"}],"month":"03","date_published":"2026-03-06T00:00:00Z","publisher":"OpenReview","department":[{"_id":"GradSch"},{"_id":"DaAl"}],"date_updated":"2026-07-27T12:50:03Z","oa_version":"Accepted Version","type":"conference_poster","_id":"21857","citation":{"apa":"Nicolicioiu, A., Iofinova, E. B., Jovanovic, A., Kurtic, E., Nikdan, M., Panferov, A., … Alistarh, D.-A. (2026). <i>Panza: Investigating the feasibility of fully-local personalized text generation</i>. <i>Third Conference on Parsimony and Learning (Proceedings Track)</i>. Tübíngen, Germany: OpenReview.","chicago":"Nicolicioiu, Armand, Eugenia B Iofinova, Andrej Jovanovic, Eldar Kurtic, Mahdi Nikdan, Andrei Panferov, Ilia Markov, Nir Shavit, and Dan-Adrian Alistarh. <i>Panza: Investigating the Feasibility of Fully-Local Personalized Text Generation</i>. <i>Third Conference on Parsimony and Learning (Proceedings Track)</i>. OpenReview, 2026.","mla":"Nicolicioiu, Armand, et al. “Panza: Investigating the Feasibility of Fully-Local Personalized Text Generation.” <i>Third Conference on Parsimony and Learning (Proceedings Track)</i>, 81, OpenReview, 2026.","ieee":"A. Nicolicioiu <i>et al.</i>, <i>Panza: Investigating the feasibility of fully-local personalized text generation</i>. OpenReview, 2026.","short":"A. Nicolicioiu, E.B. Iofinova, A. Jovanovic, E. Kurtic, M. Nikdan, A. Panferov, I. Markov, N. Shavit, D.-A. Alistarh, Panza: Investigating the Feasibility of Fully-Local Personalized Text Generation, OpenReview, 2026.","ama":"Nicolicioiu A, Iofinova EB, Jovanovic A, et al. <i>Panza: Investigating the Feasibility of Fully-Local Personalized Text Generation</i>. OpenReview; 2026.","ista":"Nicolicioiu A, Iofinova EB, Jovanovic A, Kurtic E, Nikdan M, Panferov A, Markov I, Shavit N, Alistarh D-A. 2026. Panza: Investigating the feasibility of fully-local personalized text generation, OpenReview,p."},"OA_type":"green","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"day":"06","status":"public"},{"oa_version":"Preprint","type":"preprint","acknowledgement":"EI thanks Weiwei Yang, Janardhan Kulkani, and Kate Lytvynets for their advice and support in\r\ndeveloping an earlier version of the Behemoth library. This research was supported by the Scientific\r\nService Units (SSU) of IST Austria through resources provided by Scientific Computing (SciComp).\r\nEI was supported in part by the FWF DK VGSCO, grant agreement number W1260-N35.\r\n","_id":"21859","oa":1,"date_published":"2026-01-30T00:00:00Z","language":[{"iso":"eng"}],"month":"01","date_updated":"2026-07-27T12:50:03Z","arxiv":1,"department":[{"_id":"GradSch"},{"_id":"DaAl"}],"OA_type":"green","status":"public","day":"30","citation":{"ama":"Iofinova EB, Alistarh D-A. Behemoth: Benchmarking unlearning in LLMs using fully synthetic data. <i>arXiv</i>. doi:<a href=\"https://doi.org/10.48550/arXiv.2601.23153\">10.48550/arXiv.2601.23153</a>","ista":"Iofinova EB, Alistarh D-A. Behemoth: Benchmarking unlearning in LLMs using fully synthetic data. arXiv, <a href=\"https://doi.org/10.48550/arXiv.2601.23153\">10.48550/arXiv.2601.23153</a>.","short":"E.B. Iofinova, D.-A. Alistarh, ArXiv (n.d.).","ieee":"E. B. Iofinova and D.-A. Alistarh, “Behemoth: Benchmarking unlearning in LLMs using fully synthetic data,” <i>arXiv</i>. .","mla":"Iofinova, Eugenia B., and Dan-Adrian Alistarh. “Behemoth: Benchmarking Unlearning in LLMs Using Fully Synthetic Data.” <i>ArXiv</i>, doi:<a href=\"https://doi.org/10.48550/arXiv.2601.23153\">10.48550/arXiv.2601.23153</a>.","apa":"Iofinova, E. B., &#38; Alistarh, D.-A. (n.d.). Behemoth: Benchmarking unlearning in LLMs using fully synthetic data. <i>arXiv</i>. <a href=\"https://doi.org/10.48550/arXiv.2601.23153\">https://doi.org/10.48550/arXiv.2601.23153</a>","chicago":"Iofinova, Eugenia B, and Dan-Adrian Alistarh. “Behemoth: Benchmarking Unlearning in LLMs Using Fully Synthetic Data.” <i>ArXiv</i>, n.d. <a href=\"https://doi.org/10.48550/arXiv.2601.23153\">https://doi.org/10.48550/arXiv.2601.23153</a>."},"project":[{"_id":"9B9290DE-BA93-11EA-9121-9846C619BF3A","grant_number":"W1260-N35","name":"Vienna Graduate School on Computational Optimization"}],"author":[{"last_name":"Iofinova","first_name":"Eugenia B","id":"f9a17499-f6e0-11ea-865d-fdf9a3f77117","orcid":"0000-0002-7778-3221","full_name":"Iofinova, Eugenia B"},{"first_name":"Dan-Adrian","last_name":"Alistarh","id":"4A899BFC-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-3650-940X","full_name":"Alistarh, Dan-Adrian"}],"user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","OA_place":"repository","acknowledged_ssus":[{"_id":"ScienComp"}],"related_material":{"record":[{"id":"21854","relation":"dissertation_contains","status":"public"}]},"article_processing_charge":"No","publication_status":"draft","external_id":{"arxiv":["2601.23153"]},"abstract":[{"lang":"eng","text":"As artificial neural networks, and specifically large language models, have improved rapidly in capabilities and quality, they have increasingly been deployed in real-world applications, from customer service to Google search, despite the fact that they frequently make factually incorrect or undesirable statements. This trend has inspired practical and academic interest in model editing, that is, in adjusting the weights of the model to modify its likely outputs for queries relating to a specific fact or set of facts. This may be done either to amend a fact or set of facts, for instance, to fix a frequent error in the training data, or to suppress a fact or set of facts entirely, for instance, in case of dangerous knowledge. Multiple methods have been proposed to do such edits. However, at the same time, it has been shown that such model editing can be brittle and incomplete. Moreover the effectiveness of any model editing method necessarily depends on the data on which the model is trained, and, therefore, a good understanding of the interaction of the training data distribution and the way it is stored in the network is necessary and helpful to reliably perform model editing. However, working with large language models trained on real-world data does not allow us to understand this relationship or fully measure the effects of model editing. We therefore propose Behemoth, a fully synthetic data generation framework. To demonstrate the practical insights from the framework, we explore model editing in the context of simple tabular data, demonstrating surprising findings that, in some cases, echo real-world results, for instance, that in some cases restricting the update rank results in a more effective update."}],"title":"Behemoth: Benchmarking unlearning in LLMs using fully synthetic data","date_created":"2026-05-11T08:58:07Z","year":"2026","doi":"10.48550/arXiv.2601.23153","publication":"arXiv","corr_author":"1","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2601.23153","open_access":"1"}]},{"doi":"10.15479/AT-ISTA-21422","status":"public","day":"11","date_created":"2026-03-11T07:04:26Z","year":"2026","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"has_accepted_license":"1","citation":{"mla":"Sunko, Veronika. <i>Data Underpinning “Magneto-Optical Kerr Effect in an A-Type Antiferromagnet.”</i> Institute of Science and Technology Austria, 2026, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-21422\">10.15479/AT-ISTA-21422</a>.","apa":"Sunko, V. (2026). Data underpinning “Magneto-optical Kerr effect in an A-type antiferromagnet.” Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-21422\">https://doi.org/10.15479/AT-ISTA-21422</a>","chicago":"Sunko, Veronika. “Data Underpinning ‘Magneto-Optical Kerr Effect in an A-Type Antiferromagnet.’” Institute of Science and Technology Austria, 2026. <a href=\"https://doi.org/10.15479/AT-ISTA-21422\">https://doi.org/10.15479/AT-ISTA-21422</a>.","ama":"Sunko V. Data underpinning “Magneto-optical Kerr effect in an A-type antiferromagnet.” 2026. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-21422\">10.15479/AT-ISTA-21422</a>","ista":"Sunko V. 2026. Data underpinning ‘Magneto-optical Kerr effect in an A-type antiferromagnet’, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT-ISTA-21422\">10.15479/AT-ISTA-21422</a>.","short":"V. Sunko, (2026).","ieee":"V. Sunko, “Data underpinning ‘Magneto-optical Kerr effect in an A-type antiferromagnet.’” Institute of Science and Technology Austria, 2026."},"corr_author":"1","file":[{"creator":"vsunko","success":1,"date_created":"2026-03-11T10:28:34Z","file_name":"MBT_Data_Paper.zip","content_type":"application/zip","checksum":"54db0b68f0cf919009317fd3da8f733b","relation":"main_file","access_level":"open_access","file_size":85004,"date_updated":"2026-03-11T10:28:34Z","file_id":"21429"},{"creator":"vsunko","success":1,"date_created":"2026-03-11T10:28:37Z","file_name":"README.txt","content_type":"text/plain","relation":"main_file","checksum":"df1785b7ada7cd07f76a441ee4f52266","access_level":"open_access","date_updated":"2026-03-11T10:28:37Z","file_size":2593,"file_id":"21430"}],"related_material":{"record":[{"relation":"used_in_publication","id":"21872","status":"public"}]},"_id":"21422","oa_version":"Published Version","user_id":"68b8ca59-c5b3-11ee-8790-cd641c68093d","author":[{"full_name":"Sunko, Veronika","orcid":"0000-0003-2724-3523","id":"23cb1cf6-2c7a-11ef-91a4-f72fc19f20b3","last_name":"Sunko","first_name":"Veronika"}],"type":"research_data","OA_place":"repository","date_published":"2026-03-11T00:00:00Z","month":"03","title":"Data underpinning \"Magneto-optical Kerr effect in an A-type antiferromagnet\"","date_updated":"2026-07-27T13:59:27Z","department":[{"_id":"VeSu"}],"publisher":"Institute of Science and Technology Austria","article_processing_charge":"No","file_date_updated":"2026-03-11T10:28:37Z","oa":1},{"volume":22,"OA_place":"publisher","author":[{"last_name":"Olmeda","first_name":"Fabrizio","id":"69dbf5fb-8a76-11ed-866b-fb486d8b5689","full_name":"Olmeda, Fabrizio"},{"first_name":"Tim","last_name":"Lohoff","full_name":"Lohoff, Tim"},{"first_name":"Ioannis","last_name":"Kafetzopoulos","full_name":"Kafetzopoulos, Ioannis"},{"full_name":"Clark, Stephen J.","last_name":"Clark","first_name":"Stephen J."},{"last_name":"Benson","first_name":"Laura","full_name":"Benson, Laura"},{"last_name":"Santos","first_name":"Fatima","full_name":"Santos, Fatima"},{"full_name":"Krueger, Felix","first_name":"Felix","last_name":"Krueger"},{"first_name":"Simon","last_name":"Walker","full_name":"Walker, Simon"},{"full_name":"Reik, Wolf","last_name":"Reik","first_name":"Wolf"},{"last_name":"Rulands","first_name":"Steffen","full_name":"Rulands, Steffen"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","pmid":1,"publication_status":"published","external_id":{"pmid":["42318073"]},"abstract":[{"text":"The development of complex tissues relies on the precise assignment of cell identity. At the molecular scale, this process depends on the deposition of epigenetic modifications—such as methylation—that are regulated by complex biochemical networks and occur at specific regions on the DNA and chromatin. Here we show that despite the complexity of epigenetic regulation, dynamical scaling and self-similarity of DNA methylation marks emerge in embryonic development. Drawing on single-cell multi-omics experiments, super-resolution microscopy and statistical physics, we demonstrate that these phenomena originate in dynamical feedback between DNA methylation and the formation of nanoscale dynamic chromatin aggregates. These nanoscale processes lead to genome-wide increase in DNA methylation marks following a power law and self-similar correlation functions. Using this framework, we identify methylation patterns that precede gene expression changes in embryonic symmetry breaking. Our work identifies linear sequencing measurements as a laboratory to study mesoscopic biophysical processes in vivo.","lang":"eng"}],"article_processing_charge":"Yes (via OA deal)","page":"931-940","title":"Scaling and self-similarity in the formation of the embryonic epigenome","researchdata_availability":"yes","date_created":"2026-05-10T22:02:16Z","year":"2026","das_tickbox":"1","publication":"Nature Physics","dataavailabilitystatement":"All sequencing datasets reported in this paper are available on Gene Expression Omnibus (GEO) under accession GSE166226. STORM localization data are available on Zenodo (https://doi.org/10.5281/zenodo.18965309)57. Raw images are available upon request. Code for computing the correlation functions and STORM analysis are available via GitHub at https://github.com/srulands/inference_of_spatio-temporal_processes.","doi":"10.1038/s41567-026-03263-x","publication_identifier":{"issn":["1745-2473"],"eissn":["1745-2481"]},"file":[{"file_id":"22591","file_size":7932222,"date_updated":"2026-07-27T13:54:58Z","access_level":"open_access","relation":"main_file","checksum":"58e7734f1ebaf6def642140cb489f08f","content_type":"application/pdf","file_name":"2026_NaturePhysics_Olmeda.pdf","date_created":"2026-07-27T13:54:58Z","success":1,"creator":"dernst"}],"quality_controlled":"1","supplementarymaterial":"yes","ddc":["570"],"has_accepted_license":"1","type":"journal_article","acknowledgement":"We thank all members of the W.R. and S.R. laboratories, F. Piazza, B. D. Simons, and F. Jülicher for helpful discussions. We thank M. Ciarchi for providing annotations for the chromatin compartments. S.R. is a member of the Center for Nano Science (CeNS). This project has received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (grant agreement number 950349). Research in W.R.’s laboratory was supported by the Biotechnology and Biological Sciences Research Council (BB/K010867/1), Wellcome (095645/Z/11/Z) and the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (EpiCell lineage 882798). F.O. received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement number 101034413. Open access funding provided by Max Planck Society.","intvolume":"        22","oa_version":"Published Version","article_type":"original","scopus_import":"1","_id":"21849","file_date_updated":"2026-07-27T13:54:58Z","oa":1,"date_updated":"2026-07-27T13:56:09Z","department":[{"_id":"EdHa"}],"publisher":"Springer Nature","date_published":"2026-06-01T00:00:00Z","language":[{"iso":"eng"}],"month":"06","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"OA_type":"hybrid","ec_funded":1,"day":"01","status":"public","project":[{"call_identifier":"H2020","name":"IST-BRIDGE: International postdoctoral program","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","grant_number":"101034413"}],"citation":{"mla":"Olmeda, Fabrizio, et al. “Scaling and Self-Similarity in the Formation of the Embryonic Epigenome.” <i>Nature Physics</i>, vol. 22, Springer Nature, 2026, pp. 931–40, doi:<a href=\"https://doi.org/10.1038/s41567-026-03263-x\">10.1038/s41567-026-03263-x</a>.","apa":"Olmeda, F., Lohoff, T., Kafetzopoulos, I., Clark, S. J., Benson, L., Santos, F., … Rulands, S. (2026). Scaling and self-similarity in the formation of the embryonic epigenome. <i>Nature Physics</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41567-026-03263-x\">https://doi.org/10.1038/s41567-026-03263-x</a>","chicago":"Olmeda, Fabrizio, Tim Lohoff, Ioannis Kafetzopoulos, Stephen J. Clark, Laura Benson, Fatima Santos, Felix Krueger, Simon Walker, Wolf Reik, and Steffen Rulands. “Scaling and Self-Similarity in the Formation of the Embryonic Epigenome.” <i>Nature Physics</i>. Springer Nature, 2026. <a href=\"https://doi.org/10.1038/s41567-026-03263-x\">https://doi.org/10.1038/s41567-026-03263-x</a>.","ama":"Olmeda F, Lohoff T, Kafetzopoulos I, et al. Scaling and self-similarity in the formation of the embryonic epigenome. <i>Nature Physics</i>. 2026;22:931-940. doi:<a href=\"https://doi.org/10.1038/s41567-026-03263-x\">10.1038/s41567-026-03263-x</a>","ista":"Olmeda F, Lohoff T, Kafetzopoulos I, Clark SJ, Benson L, Santos F, Krueger F, Walker S, Reik W, Rulands S. 2026. Scaling and self-similarity in the formation of the embryonic epigenome. Nature Physics. 22, 931–940.","ieee":"F. Olmeda <i>et al.</i>, “Scaling and self-similarity in the formation of the embryonic epigenome,” <i>Nature Physics</i>, vol. 22. Springer Nature, pp. 931–940, 2026.","short":"F. Olmeda, T. Lohoff, I. Kafetzopoulos, S.J. Clark, L. Benson, F. Santos, F. Krueger, S. Walker, W. Reik, S. Rulands, Nature Physics 22 (2026) 931–940."},"PlanS_conform":"1"},{"intvolume":"       302","oa_version":"Published Version","article_type":"original","type":"journal_article","acknowledgement":"This work was supported by the Scientific Service Units (SSU) of Institute of Science and Technology Austria (ISTA) through resources provided by the Imaging & Optics Facility (IOF) and the MiBa Machine Shop. Specifically; Robert Hauschild (IOF), sharing designs, insights and pioneering 3D printing activities at the Imaging and Optics Facility; Bernhard Hochreiter (IOF), for support and testing of anoxic chamber. We also thank Ana Rita Carvalho Faria and Oliver Biehlmaier (Biozentrum University of Basel, Imaging Core Facility) for sharing the design of the adopted power meter.\r\nOpen Access funding provided by Institute of Science and Technology Austria.","scopus_import":"1","_id":"21883","file_date_updated":"2026-07-27T14:01:34Z","oa":1,"date_published":"2026-06-01T00:00:00Z","month":"06","language":[{"iso":"eng"}],"date_updated":"2026-07-27T14:02:46Z","publisher":"Wiley","department":[{"_id":"Bio"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"OA_type":"hybrid","day":"01","status":"public","citation":{"ama":"Goudarzi M, Schuster M, Milberger A, Gunkel M, Terjung S, Krens G. 3D printing in core facilities – Low pain, high gain. <i>Journal of Microscopy</i>. 2026;302(3):382-395. doi:<a href=\"https://doi.org/10.1111/jmi.70106\">10.1111/jmi.70106</a>","ista":"Goudarzi M, Schuster M, Milberger A, Gunkel M, Terjung S, Krens G. 2026. 3D printing in core facilities – Low pain, high gain. Journal of Microscopy. 302(3), 382–395.","short":"M. Goudarzi, M. Schuster, A. Milberger, M. Gunkel, S. Terjung, G. Krens, Journal of Microscopy 302 (2026) 382–395.","ieee":"M. Goudarzi, M. Schuster, A. Milberger, M. Gunkel, S. Terjung, and G. Krens, “3D printing in core facilities – Low pain, high gain,” <i>Journal of Microscopy</i>, vol. 302, no. 3. Wiley, pp. 382–395, 2026.","mla":"Goudarzi, Mohammad, et al. “3D Printing in Core Facilities – Low Pain, High Gain.” <i>Journal of Microscopy</i>, vol. 302, no. 3, Wiley, 2026, pp. 382–95, doi:<a href=\"https://doi.org/10.1111/jmi.70106\">10.1111/jmi.70106</a>.","apa":"Goudarzi, M., Schuster, M., Milberger, A., Gunkel, M., Terjung, S., &#38; Krens, G. (2026). 3D printing in core facilities – Low pain, high gain. <i>Journal of Microscopy</i>. Wiley. <a href=\"https://doi.org/10.1111/jmi.70106\">https://doi.org/10.1111/jmi.70106</a>","chicago":"Goudarzi, Mohammad, Maximilian Schuster, Arthur Milberger, Manuel Gunkel, Stefan Terjung, and Gabriel Krens. “3D Printing in Core Facilities – Low Pain, High Gain.” <i>Journal of Microscopy</i>. Wiley, 2026. <a href=\"https://doi.org/10.1111/jmi.70106\">https://doi.org/10.1111/jmi.70106</a>."},"PlanS_conform":"1","author":[{"full_name":"Goudarzi, Mohammad","id":"3384113A-F248-11E8-B48F-1D18A9856A87","first_name":"Mohammad","last_name":"Goudarzi"},{"full_name":"Schuster, Maximilian","id":"37e65def-d415-11eb-ae59-a7b67be103db","first_name":"Maximilian","last_name":"Schuster"},{"first_name":"Arthur","last_name":"Milberger","full_name":"Milberger, Arthur"},{"first_name":"Manuel","last_name":"Gunkel","full_name":"Gunkel, Manuel"},{"full_name":"Terjung, Stefan","first_name":"Stefan","last_name":"Terjung"},{"last_name":"Krens","first_name":"Gabriel","full_name":"Krens, Gabriel","orcid":"0000-0003-4761-5996","id":"2B819732-F248-11E8-B48F-1D18A9856A87"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","OA_place":"publisher","volume":302,"acknowledged_ssus":[{"_id":"Bio"},{"_id":"M-Shop"}],"pmid":1,"article_processing_charge":"Yes (via OA deal)","page":"382-395","publication_status":"published","external_id":{"pmid":["42104760"]},"abstract":[{"lang":"eng","text":"Three-dimensional (3D) printing has rapidly developed from a niche hobbyist activity into a widely accessible and indispensable technology across multiple scientific disciplines. Within microscopy, optical engineering laboratories and imaging core facilities, 3D printing enables creating customised solutions for sample holders, optical components and everyday laboratory tools that traditionally required specialised machining. By providing rapid prototyping, low-cost production and reproducibility, 3D printing facilitates innovation and efficiency in facility operations. This article provides a perspective on the possibilities, challenges, and practical aspects of implementing 3D printing within microscopy core facilities. Instead of providing technical review about 3D printing, we focus on service organisation, user engagement, resource management and community-driven repositories for design dissemination. Our aim is to share insights with those considering the implementation of 3D printing as a service for developing add-on components to ease the operation of different aspects of the machine-park driven services and those who are managing advanced instrumentation within research groups."}],"title":"3D printing in core facilities – Low pain, high gain","date_created":"2026-05-17T22:02:11Z","year":"2026","researchdata_availability":"no","doi":"10.1111/jmi.70106","publication_identifier":{"eissn":["1365-2818"],"issn":["0022-2720"]},"issue":"3","das_tickbox":"0","publication":"Journal of Microscopy","supplementarymaterial":"no","corr_author":"1","quality_controlled":"1","file":[{"access_level":"open_access","checksum":"06dfad92b1465ed614a1201b4129960a","relation":"main_file","date_updated":"2026-07-27T14:01:34Z","file_size":4625767,"file_id":"22593","success":1,"creator":"dernst","date_created":"2026-07-27T14:01:34Z","content_type":"application/pdf","file_name":"2026_JourMicroscopy_Goudarzi.pdf"}],"has_accepted_license":"1","ddc":["600"]},{"file":[{"creator":"dernst","success":1,"date_created":"2026-07-27T13:58:06Z","file_name":"2026_NatureComm_Sunko.pdf","content_type":"application/pdf","checksum":"bde19c4342933c05fe801c2bef7dc732","relation":"main_file","access_level":"open_access","date_updated":"2026-07-27T13:58:06Z","file_size":1054779,"file_id":"22592"}],"quality_controlled":"1","corr_author":"1","supplementarymaterial":"yes","ddc":["530"],"has_accepted_license":"1","researchdata_availability":"yes","article_number":"7364","year":"2026","date_created":"2026-05-12T21:31:27Z","publication":"Nature Communications","das_tickbox":"1","publication_identifier":{"eissn":["2041-1723"]},"dataavailabilitystatement":"The datasets generated and analyzed during the study of “Magneto-optical Kerr effect in an A-type antiferromagnet\" are available in the ISTA REx repository with https://doi.org/10.15479/AT-ISTA-21422.","doi":"10.1038/s41467-026-72577-4","abstract":[{"text":"Magneto-optic Kerr effect (MOKE) is a powerful probe of broken time-reversal symmetry (T), typically used to study ferromagnets. While MOKE has been observed in some antiferromagnets (AFMs) with vanishing magnetization, it is often associated with structures whose symmetry is lower than basic collinear, bipartite order. In contrast, theory predicts a mechanism for MOKE intrinsic to all AFMs of A-type, i.e. layered AFMs in which ferromagnetic layers are antiferromagnetically aligned. Here we report the experimental confirmation of this mechanism in a bulk AFM. We achieve this by measuring the imaginary component of MOKE as a function of photon energy in MnBi2Te4, an A-type AFM where T is preserved in combination with a translation, and comparing the experimental results with model calculations. Our model suggests that observable MOKE should be expected in all collinear A-type AFMs with out-of-plane spin order, thus enabling optical detection of AFM domains and expanding the scope of MOKE to few-layer AFMs.","lang":"eng"}],"external_id":{"arxiv":["2504.16167"]},"publication_status":"published","article_processing_charge":"Yes","title":"Magneto-optical Kerr effect in an A-type antiferromagnet","OA_place":"publisher","volume":17,"author":[{"first_name":"Veronika","last_name":"Sunko","full_name":"Sunko, Veronika","orcid":"0000-0003-2724-3523","id":"23cb1cf6-2c7a-11ef-91a4-f72fc19f20b3"},{"full_name":"Ahsanullah, Salman","first_name":"Salman","last_name":"Ahsanullah"},{"full_name":"Jain, Vivek","first_name":"Vivek","last_name":"Jain"},{"full_name":"Weber, Sophie","first_name":"Sophie","last_name":"Weber"},{"first_name":"Sivaloganathan","last_name":"Kumaran","full_name":"Kumaran, Sivaloganathan"},{"last_name":"Yan","first_name":"Jiaqiang","full_name":"Yan, Jiaqiang"},{"last_name":"Orenstein","first_name":"Joseph","full_name":"Orenstein, Joseph"},{"last_name":"Ovchinnikov","first_name":"Dmitry","full_name":"Ovchinnikov, Dmitry"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","related_material":{"record":[{"status":"public","relation":"research_data","id":"21422"}]},"PlanS_conform":"1","citation":{"mla":"Sunko, Veronika, et al. “Magneto-Optical Kerr Effect in an A-Type Antiferromagnet.” <i>Nature Communications</i>, vol. 17, 7364, Springer Nature, 2026, doi:<a href=\"https://doi.org/10.1038/s41467-026-72577-4\">10.1038/s41467-026-72577-4</a>.","apa":"Sunko, V., Ahsanullah, S., Jain, V., Weber, S., Kumaran, S., Yan, J., … Ovchinnikov, D. (2026). Magneto-optical Kerr effect in an A-type antiferromagnet. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-026-72577-4\">https://doi.org/10.1038/s41467-026-72577-4</a>","chicago":"Sunko, Veronika, Salman Ahsanullah, Vivek Jain, Sophie Weber, Sivaloganathan Kumaran, Jiaqiang Yan, Joseph Orenstein, and Dmitry Ovchinnikov. “Magneto-Optical Kerr Effect in an A-Type Antiferromagnet.” <i>Nature Communications</i>. Springer Nature, 2026. <a href=\"https://doi.org/10.1038/s41467-026-72577-4\">https://doi.org/10.1038/s41467-026-72577-4</a>.","ama":"Sunko V, Ahsanullah S, Jain V, et al. Magneto-optical Kerr effect in an A-type antiferromagnet. <i>Nature Communications</i>. 2026;17. doi:<a href=\"https://doi.org/10.1038/s41467-026-72577-4\">10.1038/s41467-026-72577-4</a>","ista":"Sunko V, Ahsanullah S, Jain V, Weber S, Kumaran S, Yan J, Orenstein J, Ovchinnikov D. 2026. Magneto-optical Kerr effect in an A-type antiferromagnet. Nature Communications. 17, 7364.","ieee":"V. Sunko <i>et al.</i>, “Magneto-optical Kerr effect in an A-type antiferromagnet,” <i>Nature Communications</i>, vol. 17. Springer Nature, 2026.","short":"V. Sunko, S. Ahsanullah, V. Jain, S. Weber, S. Kumaran, J. Yan, J. Orenstein, D. Ovchinnikov, Nature Communications 17 (2026)."},"OA_type":"gold","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"status":"public","day":"27","oa":1,"file_date_updated":"2026-07-27T13:58:06Z","DOAJ_listed":"1","publisher":"Springer Nature","arxiv":1,"department":[{"_id":"VeSu"}],"date_updated":"2026-07-27T13:59:27Z","language":[{"iso":"eng"}],"month":"07","date_published":"2026-07-27T00:00:00Z","acknowledgement":"We thank Christine Kuntscher for providing optical conductivity and reflectance data published in ref. 33, and Nicola Spaldin, Joel Moore and Bevin Huang for useful discussions. V.S. and J.O. received support from the Gordon and Betty Moore Foundation’s EPiQS Initiative through Grant GBMF4537 awarded to J.O. at UC Berkeley. Experimental and theoretical work at LBNL and UC Berkeley was funded by the Quantum Materials (KC2202) program under the U.S. Department of Energy, Office of Science, Office of Basic Energy Sciences, Materials Sciences and Engineering Division under Contract No. DE-AC02-05CH11231. Work at the University of Kansas was supported by the U.S. Department of Energy, Office of Science, Basic Energy Sciences, EPSCoR, and Materials Sciences and Engineering Division under Award No. DE-SC0025319. Parts of device fabrication were performed in the KU Nanofabrication Facility, which is supported by the National Institutes of Health NIGMS P30GM145499. Work at ORNL was supported by the U. S. Department of Energy, Office of Science, Basic Energy Sciences, Materials Sciences and Engineering Division. For the DFT calculations we used resources provided by the Swedish National Infrastructure for Computing (SNIC) at C3SE. We acknowledge support from the US National Science Foundation (NSF) Grant Number 2201516 under the Accelnet program of Office of International Science and Engineering (OISE). This publication is funded in part by a QuantEmX grant from ICAM and the Gordon and Betty Moore Foundation through Grant GBMF9616 to S. K.","type":"journal_article","article_type":"original","oa_version":"Published Version","intvolume":"        17","_id":"21872","scopus_import":"1"},{"scopus_import":"1","_id":"21950","type":"journal_article","oa_version":"None","intvolume":"        54","article_type":"original","date_updated":"2026-07-27T14:13:17Z","department":[{"_id":"PreCl"}],"publisher":"SAGE Publications","date_published":"2026-07-01T00:00:00Z","language":[{"iso":"eng"}],"month":"07","status":"public","day":"01","OA_type":"closed access","citation":{"ama":"Ulman YI, Kostomitsopoulos N, Camenzind S, Kitsara M, Pavone IR, Schober S. Emerging bioethical conflicts: One Health and animal experimentation. <i>Alternatives to Laboratory Animals</i>. 2026;54(4):226-235. doi:<a href=\"https://doi.org/10.1177/02611929261453330\">10.1177/02611929261453330</a>","ista":"Ulman YI, Kostomitsopoulos N, Camenzind S, Kitsara M, Pavone IR, Schober S. 2026. Emerging bioethical conflicts: One Health and animal experimentation. Alternatives to Laboratory Animals. 54(4), 226–235.","short":"Y.I. Ulman, N. Kostomitsopoulos, S. Camenzind, M. Kitsara, I.R. Pavone, S. Schober, Alternatives to Laboratory Animals 54 (2026) 226–235.","ieee":"Y. I. Ulman, N. Kostomitsopoulos, S. Camenzind, M. Kitsara, I. R. Pavone, and S. Schober, “Emerging bioethical conflicts: One Health and animal experimentation,” <i>Alternatives to Laboratory Animals</i>, vol. 54, no. 4. SAGE Publications, pp. 226–235, 2026.","mla":"Ulman, Yesim Isil, et al. “Emerging Bioethical Conflicts: One Health and Animal Experimentation.” <i>Alternatives to Laboratory Animals</i>, vol. 54, no. 4, SAGE Publications, 2026, pp. 226–35, doi:<a href=\"https://doi.org/10.1177/02611929261453330\">10.1177/02611929261453330</a>.","chicago":"Ulman, Yesim Isil, Nikos Kostomitsopoulos, Samuel Camenzind, Maria Kitsara, Ilja Richard Pavone, and Sophie Schober. “Emerging Bioethical Conflicts: One Health and Animal Experimentation.” <i>Alternatives to Laboratory Animals</i>. SAGE Publications, 2026. <a href=\"https://doi.org/10.1177/02611929261453330\">https://doi.org/10.1177/02611929261453330</a>.","apa":"Ulman, Y. I., Kostomitsopoulos, N., Camenzind, S., Kitsara, M., Pavone, I. R., &#38; Schober, S. (2026). Emerging bioethical conflicts: One Health and animal experimentation. <i>Alternatives to Laboratory Animals</i>. SAGE Publications. <a href=\"https://doi.org/10.1177/02611929261453330\">https://doi.org/10.1177/02611929261453330</a>"},"pmid":1,"volume":54,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"full_name":"Ulman, Yesim Isil","last_name":"Ulman","first_name":"Yesim Isil"},{"full_name":"Kostomitsopoulos, Nikos","last_name":"Kostomitsopoulos","first_name":"Nikos"},{"full_name":"Camenzind, Samuel","first_name":"Samuel","last_name":"Camenzind"},{"last_name":"Kitsara","first_name":"Maria","full_name":"Kitsara, Maria"},{"full_name":"Pavone, Ilja Richard","first_name":"Ilja Richard","last_name":"Pavone"},{"id":"80b0a0ef-4b9f-11ec-b119-8d9d94c4a1d8","full_name":"Schober, Sophie","first_name":"Sophie","last_name":"Schober"}],"title":"Emerging bioethical conflicts: One Health and animal experimentation","external_id":{"pmid":["42185081"]},"publication_status":"published","abstract":[{"lang":"eng","text":"One Health initiatives are modern paradigms for research and health care practices in various fields. Concrete definitions of the One Health framework, however, remain heterogeneous, leading to conceptual problems and uncertainties in the application of the framework. This article discusses several approaches to the One Health concept, and their associated consequences, with special focus on animal experimentation. The first issue addressed is how One Health should be defined, as well as what (and who) should be considered within a One Health approach. In order to shed further light on this, we explore the history of animals in biomedical science, highlighting historical milestones in the use of animal models, as well as the development and current state of ethical considerations in the field of animal experimentation. The second issue comes with the inclusion of animal experimentation per se as part of the One Health concept. Therefore, particular attention is paid to bioethical principles and the resulting problems that can arise when applying them to the One Health concept. Arguments such as the idea of inequality between humans and non-human animals, and the premise that all actions are done for the benefit of humans, are raised and then used to explore the question of whether the One Health concept is compatible with existing bioethical principles. Based on the bioethical principles of protecting the environment, the biodiversity and biosphere, this paper seeks an inclusive perspective of the One Health concept. Successful solutions will be based on this concept, which embraces all living beings. The authors conclude that a multispecies ethics approach could help create a more ethical ecosystem that is aligned with the wellbeing of all life on a shared planet."}],"article_processing_charge":"No","page":"226-235","das_tickbox":"1","publication":"Alternatives to Laboratory Animals","doi":"10.1177/02611929261453330","publication_identifier":{"issn":["0261-1929"],"eissn":["2632-3559"]},"issue":"4","date_created":"2026-06-07T22:01:36Z","year":"2026","quality_controlled":"1","corr_author":"1"},{"publisher":"Springer Nature","department":[{"_id":"BeVi"}],"date_updated":"2026-07-27T14:05:02Z","month":"06","language":[{"iso":"eng"}],"date_published":"2026-06-01T00:00:00Z","type":"journal_article","article_type":"comment","intvolume":"        10","oa_version":"None","_id":"21900","scopus_import":"1","citation":{"short":"F. Ruzicka, Nature Ecology &#38; Evolution 10 (2026) 1035–1036.","ieee":"F. Ruzicka, “Reverse genetics of sexual antagonism,” <i>Nature Ecology &#38; Evolution</i>, vol. 10. Springer Nature, pp. 1035–1036, 2026.","ista":"Ruzicka F. 2026. Reverse genetics of sexual antagonism. Nature Ecology &#38; Evolution. 10, 1035–1036.","ama":"Ruzicka F. Reverse genetics of sexual antagonism. <i>Nature Ecology &#38; Evolution</i>. 2026;10:1035-1036. doi:<a href=\"https://doi.org/10.1038/s41559-026-03036-y\">10.1038/s41559-026-03036-y</a>","apa":"Ruzicka, F. (2026). Reverse genetics of sexual antagonism. <i>Nature Ecology &#38; Evolution</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41559-026-03036-y\">https://doi.org/10.1038/s41559-026-03036-y</a>","chicago":"Ruzicka, Filip. “Reverse Genetics of Sexual Antagonism.” <i>Nature Ecology &#38; Evolution</i>. Springer Nature, 2026. <a href=\"https://doi.org/10.1038/s41559-026-03036-y\">https://doi.org/10.1038/s41559-026-03036-y</a>.","mla":"Ruzicka, Filip. “Reverse Genetics of Sexual Antagonism.” <i>Nature Ecology &#38; Evolution</i>, vol. 10, Springer Nature, 2026, pp. 1035–36, doi:<a href=\"https://doi.org/10.1038/s41559-026-03036-y\">10.1038/s41559-026-03036-y</a>."},"OA_type":"closed access","day":"01","status":"public","abstract":[{"text":"Individually silencing 125 fruit fly genes reveals opposing fitness effects of mutations between females and males, as well as between germline and somatic tissues.","lang":"eng"}],"external_id":{"pmid":["42067637 "]},"publication_status":"published","page":"1035-1036","article_processing_charge":"No","title":"Reverse genetics of sexual antagonism","volume":10,"author":[{"first_name":"Filip","last_name":"Ruzicka","id":"347955dd-57b0-11ee-9095-c28bdd368f4b","full_name":"Ruzicka, Filip"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","pmid":1,"quality_controlled":"1","corr_author":"1","supplementarymaterial":"no","researchdata_availability":"no","year":"2026","date_created":"2026-05-20T14:36:45Z","publication":"Nature Ecology & Evolution","das_tickbox":"0","doi":"10.1038/s41559-026-03036-y","publication_identifier":{"eissn":["2397-334X"]}}]