[{"article_processing_charge":"No","extern":"1","quality_controlled":"1","citation":{"short":"F. Träuble, A. Dittadi, M. Wuthrich, F. Widmaier, P.V. Gehler, O. Winther, F. Locatello, O. Bachem, B. Schölkopf, S. Bauer, in:, ICML 2021 Workshop on Unsupervised Reinforcement Learning, 2021.","mla":"Träuble, Frederik, et al. “Representation Learning for Out-of-Distribution Generalization in Reinforcement Learning.” <i>ICML 2021 Workshop on Unsupervised Reinforcement Learning</i>, 2021.","ama":"Träuble F, Dittadi A, Wuthrich M, et al. Representation learning for out-of-distribution generalization in reinforcement learning. In: <i>ICML 2021 Workshop on Unsupervised Reinforcement Learning</i>. ; 2021.","ieee":"F. Träuble <i>et al.</i>, “Representation learning for out-of-distribution generalization in reinforcement learning,” in <i>ICML 2021 Workshop on Unsupervised Reinforcement Learning</i>, Virtual, 2021.","ista":"Träuble F, Dittadi A, Wuthrich M, Widmaier F, Gehler PV, Winther O, Locatello F, Bachem O, Schölkopf B, Bauer S. 2021. Representation learning for out-of-distribution generalization in reinforcement learning. ICML 2021 Workshop on Unsupervised Reinforcement Learning. ICML: International Conference on Machine Learning.","chicago":"Träuble, Frederik, Andrea Dittadi, Manuel Wuthrich, Felix Widmaier, Peter Vincent Gehler, Ole Winther, Francesco Locatello, Olivier Bachem, Bernhard Schölkopf, and Stefan Bauer. “Representation Learning for Out-of-Distribution Generalization in Reinforcement Learning.” In <i>ICML 2021 Workshop on Unsupervised Reinforcement Learning</i>, 2021.","apa":"Träuble, F., Dittadi, A., Wuthrich, M., Widmaier, F., Gehler, P. V., Winther, O., … Bauer, S. (2021). Representation learning for out-of-distribution generalization in reinforcement learning. In <i>ICML 2021 Workshop on Unsupervised Reinforcement Learning</i>. Virtual."},"_id":"14332","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"None","month":"07","publication_status":"published","date_created":"2023-09-13T12:43:14Z","year":"2021","title":"Representation learning for out-of-distribution generalization in reinforcement learning","date_updated":"2023-09-13T12:44:00Z","status":"public","department":[{"_id":"FrLo"}],"type":"conference","author":[{"first_name":"Frederik","full_name":"Träuble, Frederik","last_name":"Träuble"},{"full_name":"Dittadi, Andrea","first_name":"Andrea","last_name":"Dittadi"},{"last_name":"Wuthrich","first_name":"Manuel","full_name":"Wuthrich, Manuel"},{"last_name":"Widmaier","full_name":"Widmaier, Felix","first_name":"Felix"},{"full_name":"Gehler, Peter Vincent","first_name":"Peter Vincent","last_name":"Gehler"},{"full_name":"Winther, Ole","first_name":"Ole","last_name":"Winther"},{"id":"26cfd52f-2483-11ee-8040-88983bcc06d4","last_name":"Locatello","first_name":"Francesco","full_name":"Locatello, Francesco","orcid":"0000-0002-4850-0683"},{"last_name":"Bachem","first_name":"Olivier","full_name":"Bachem, Olivier"},{"full_name":"Schölkopf, Bernhard","first_name":"Bernhard","last_name":"Schölkopf"},{"last_name":"Bauer","first_name":"Stefan","full_name":"Bauer, Stefan"}],"language":[{"iso":"eng"}],"date_published":"2021-07-23T00:00:00Z","day":"23","abstract":[{"lang":"eng","text":"Learning data representations that are useful for various downstream tasks is a cornerstone of artificial intelligence. While existing methods are typically evaluated on downstream tasks such as classification or generative image quality, we propose to assess representations through their usefulness in downstream control tasks, such as reaching or pushing objects. By training over 10,000 reinforcement learning policies, we extensively evaluate to what extent different representation properties affect out-of-distribution (OOD) generalization. Finally, we demonstrate zero-shot transfer of these policies from simulation to the real world, without any domain randomization or fine-tuning. This paper aims to establish the first systematic characterization of the usefulness of learned representations for real-world OOD downstream tasks."}],"conference":{"end_date":"2021-07-23","name":"ICML: International Conference on Machine Learning","start_date":"2021-07-23","location":"Virtual"},"publication":"ICML 2021 Workshop on Unsupervised Reinforcement Learning"},{"isi":1,"publication_status":"published","month":"10","volume":37,"main_file_link":[{"url":"https://doi.org/10.3866/PKU.WHXB202108017","open_access":"1"}],"date_updated":"2025-09-10T10:12:25Z","status":"public","article_number":"2108017","quality_controlled":"1","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","_id":"14800","oa_version":"Submitted Version","language":[{"iso":"eng"}],"publication":"Acta Physico-Chimica Sinica","scopus_import":"1","department":[{"_id":"MaIb"}],"type":"journal_article","external_id":{"isi":["000731879300002"]},"publication_identifier":{"issn":["1001-4861"]},"year":"2021","date_created":"2024-01-14T23:00:58Z","intvolume":"        37","title":"Recent progress on two-dimensional materials","publisher":"Peking University","article_processing_charge":"No","citation":{"ieee":"C. Chang <i>et al.</i>, “Recent progress on two-dimensional materials,” <i>Acta Physico-Chimica Sinica</i>, vol. 37, no. 12. Peking University, 2021.","ista":"Chang C, Chen W, Chen Y, Chen Y, Chen Y, Ding F, Fan C, Fan HJ, Fan Z, Gong C, Gong Y, He Q, Hong X, Hu S, Hu W, Huang W, Huang Y, Ji W, Li D, Li LJ, Li Q, Lin L, Ling C, Liu M, Liu N, Liu Z, Loh KP, Ma J, Miao F, Peng H, Shao M, Song L, Su S, Sun S, Tan C, Tang Z, Wang D, Wang H, Wang J, Wang X, Wang X, Wee ATS, Wei Z, Wu Y, Wu ZS, Xiong J, Xiong Q, Xu W, Yin P, Zeng H, Zeng Z, Zhai T, Zhang H, Zhang H, Zhang Q, Zhang T, Zhang X, Zhao LD, Zhao M, Zhao W, Zhao Y, Zhou KG, Zhou X, Zhou Y, Zhu H, Zhang H, Liu Z. 2021. Recent progress on two-dimensional materials. Acta Physico-Chimica Sinica. 37(12), 2108017.","chicago":"Chang, Cheng, Wei Chen, Ye Chen, Yonghua Chen, Yu Chen, Feng Ding, Chunhai Fan, et al. “Recent Progress on Two-Dimensional Materials.” <i>Acta Physico-Chimica Sinica</i>. Peking University, 2021. <a href=\"https://doi.org/10.3866/PKU.WHXB202108017\">https://doi.org/10.3866/PKU.WHXB202108017</a>.","apa":"Chang, C., Chen, W., Chen, Y., Chen, Y., Chen, Y., Ding, F., … Liu, Z. (2021). Recent progress on two-dimensional materials. <i>Acta Physico-Chimica Sinica</i>. Peking University. <a href=\"https://doi.org/10.3866/PKU.WHXB202108017\">https://doi.org/10.3866/PKU.WHXB202108017</a>","short":"C. Chang, W. Chen, Y. Chen, Y. Chen, Y. Chen, F. Ding, C. Fan, H.J. Fan, Z. Fan, C. Gong, Y. Gong, Q. He, X. Hong, S. Hu, W. Hu, W. Huang, Y. Huang, W. Ji, D. Li, L.J. Li, Q. Li, L. Lin, C. Ling, M. Liu, N. Liu, Z. Liu, K.P. Loh, J. Ma, F. Miao, H. Peng, M. Shao, L. Song, S. Su, S. Sun, C. Tan, Z. Tang, D. Wang, H. Wang, J. Wang, X. Wang, X. Wang, A.T.S. Wee, Z. Wei, Y. Wu, Z.S. Wu, J. Xiong, Q. Xiong, W. Xu, P. Yin, H. Zeng, Z. Zeng, T. Zhai, H. Zhang, H. Zhang, Q. Zhang, T. Zhang, X. Zhang, L.D. Zhao, M. Zhao, W. Zhao, Y. Zhao, K.G. Zhou, X. Zhou, Y. Zhou, H. Zhu, H. Zhang, Z. Liu, Acta Physico-Chimica Sinica 37 (2021).","mla":"Chang, Cheng, et al. “Recent Progress on Two-Dimensional Materials.” <i>Acta Physico-Chimica Sinica</i>, vol. 37, no. 12, 2108017, Peking University, 2021, doi:<a href=\"https://doi.org/10.3866/PKU.WHXB202108017\">10.3866/PKU.WHXB202108017</a>.","ama":"Chang C, Chen W, Chen Y, et al. Recent progress on two-dimensional materials. <i>Acta Physico-Chimica Sinica</i>. 2021;37(12). doi:<a href=\"https://doi.org/10.3866/PKU.WHXB202108017\">10.3866/PKU.WHXB202108017</a>"},"author":[{"orcid":"0000-0002-9515-4277","first_name":"Cheng","full_name":"Chang, Cheng","last_name":"Chang","id":"9E331C2E-9F27-11E9-AE48-5033E6697425"},{"first_name":"Wei","full_name":"Chen, Wei","last_name":"Chen"},{"first_name":"Ye","full_name":"Chen, Ye","last_name":"Chen"},{"last_name":"Chen","full_name":"Chen, Yonghua","first_name":"Yonghua"},{"last_name":"Chen","first_name":"Yu","full_name":"Chen, Yu"},{"full_name":"Ding, Feng","first_name":"Feng","last_name":"Ding"},{"full_name":"Fan, Chunhai","first_name":"Chunhai","last_name":"Fan"},{"full_name":"Fan, Hong Jin","first_name":"Hong Jin","last_name":"Fan"},{"last_name":"Fan","full_name":"Fan, Zhanxi","first_name":"Zhanxi"},{"last_name":"Gong","first_name":"Cheng","full_name":"Gong, Cheng"},{"last_name":"Gong","full_name":"Gong, Yongji","first_name":"Yongji"},{"first_name":"Qiyuan","full_name":"He, Qiyuan","last_name":"He"},{"last_name":"Hong","first_name":"Xun","full_name":"Hong, Xun"},{"first_name":"Sheng","full_name":"Hu, Sheng","last_name":"Hu"},{"full_name":"Hu, Weida","first_name":"Weida","last_name":"Hu"},{"first_name":"Wei","full_name":"Huang, Wei","last_name":"Huang"},{"last_name":"Huang","first_name":"Yuan","full_name":"Huang, Yuan"},{"last_name":"Ji","full_name":"Ji, Wei","first_name":"Wei"},{"last_name":"Li","first_name":"Dehui","full_name":"Li, Dehui"},{"full_name":"Li, Lain Jong","first_name":"Lain Jong","last_name":"Li"},{"last_name":"Li","full_name":"Li, Qiang","first_name":"Qiang"},{"last_name":"Lin","full_name":"Lin, Li","first_name":"Li"},{"last_name":"Ling","full_name":"Ling, Chongyi","first_name":"Chongyi"},{"last_name":"Liu","first_name":"Minghua","full_name":"Liu, Minghua"},{"first_name":"Nan","full_name":"Liu, Nan","last_name":"Liu"},{"full_name":"Liu, Zhuang","first_name":"Zhuang","last_name":"Liu"},{"first_name":"Kian Ping","full_name":"Loh, Kian Ping","last_name":"Loh"},{"last_name":"Ma","full_name":"Ma, Jianmin","first_name":"Jianmin"},{"first_name":"Feng","full_name":"Miao, Feng","last_name":"Miao"},{"first_name":"Hailin","full_name":"Peng, Hailin","last_name":"Peng"},{"last_name":"Shao","first_name":"Mingfei","full_name":"Shao, Mingfei"},{"first_name":"Li","full_name":"Song, Li","last_name":"Song"},{"last_name":"Su","full_name":"Su, Shao","first_name":"Shao"},{"last_name":"Sun","full_name":"Sun, Shuo","first_name":"Shuo"},{"last_name":"Tan","first_name":"Chaoliang","full_name":"Tan, Chaoliang"},{"last_name":"Tang","full_name":"Tang, Zhiyong","first_name":"Zhiyong"},{"full_name":"Wang, Dingsheng","first_name":"Dingsheng","last_name":"Wang"},{"last_name":"Wang","first_name":"Huan","full_name":"Wang, Huan"},{"last_name":"Wang","full_name":"Wang, Jinlan","first_name":"Jinlan"},{"full_name":"Wang, Xin","first_name":"Xin","last_name":"Wang"},{"last_name":"Wang","full_name":"Wang, Xinran","first_name":"Xinran"},{"full_name":"Wee, Andrew T.S.","first_name":"Andrew T.S.","last_name":"Wee"},{"last_name":"Wei","full_name":"Wei, Zhongming","first_name":"Zhongming"},{"full_name":"Wu, Yuen","first_name":"Yuen","last_name":"Wu"},{"last_name":"Wu","full_name":"Wu, Zhong Shuai","first_name":"Zhong Shuai"},{"first_name":"Jie","full_name":"Xiong, Jie","last_name":"Xiong"},{"first_name":"Qihua","full_name":"Xiong, Qihua","last_name":"Xiong"},{"full_name":"Xu, Weigao","first_name":"Weigao","last_name":"Xu"},{"full_name":"Yin, Peng","first_name":"Peng","last_name":"Yin"},{"last_name":"Zeng","first_name":"Haibo","full_name":"Zeng, Haibo"},{"last_name":"Zeng","full_name":"Zeng, Zhiyuan","first_name":"Zhiyuan"},{"last_name":"Zhai","first_name":"Tianyou","full_name":"Zhai, Tianyou"},{"last_name":"Zhang","first_name":"Han","full_name":"Zhang, Han"},{"full_name":"Zhang, Hui","first_name":"Hui","last_name":"Zhang"},{"full_name":"Zhang, Qichun","first_name":"Qichun","last_name":"Zhang"},{"full_name":"Zhang, Tierui","first_name":"Tierui","last_name":"Zhang"},{"last_name":"Zhang","full_name":"Zhang, Xiang","first_name":"Xiang"},{"last_name":"Zhao","first_name":"Li Dong","full_name":"Zhao, Li Dong"},{"last_name":"Zhao","first_name":"Meiting","full_name":"Zhao, Meiting"},{"last_name":"Zhao","full_name":"Zhao, Weijie","first_name":"Weijie"},{"full_name":"Zhao, Yunxuan","first_name":"Yunxuan","last_name":"Zhao"},{"last_name":"Zhou","first_name":"Kai Ge","full_name":"Zhou, Kai Ge"},{"full_name":"Zhou, Xing","first_name":"Xing","last_name":"Zhou"},{"last_name":"Zhou","first_name":"Yu","full_name":"Zhou, Yu"},{"full_name":"Zhu, Hongwei","first_name":"Hongwei","last_name":"Zhu"},{"last_name":"Zhang","full_name":"Zhang, Hua","first_name":"Hua"},{"last_name":"Liu","first_name":"Zhongfan","full_name":"Liu, Zhongfan"}],"oa":1,"date_published":"2021-10-13T00:00:00Z","day":"13","abstract":[{"text":"Research on two-dimensional (2D) materials has been explosively increasing in last seventeen years in varying subjects including condensed matter physics, electronic engineering, materials science, and chemistry since the mechanical exfoliation of graphene in 2004. Starting from graphene, 2D materials now have become a big family with numerous members and diverse categories. The unique structural features and physicochemical properties of 2D materials make them one class of the most appealing candidates for a wide range of potential applications. In particular, we have seen some major breakthroughs made in the field of 2D materials in last five years not only in developing novel synthetic methods and exploring new structures/properties but also in identifying innovative applications and pushing forward commercialisation. In this review, we provide a critical summary on the recent progress made in the field of 2D materials with a particular focus on last five years. After a brief background introduction, we first discuss the major synthetic methods for 2D materials, including the mechanical exfoliation, liquid exfoliation, vapor phase deposition, and wet-chemical synthesis as well as phase engineering of 2D materials belonging to the field of phase engineering of nanomaterials (PEN). We then introduce the superconducting/optical/magnetic properties and chirality of 2D materials along with newly emerging magic angle 2D superlattices. Following that, the promising applications of 2D materials in electronics, optoelectronics, catalysis, energy storage, solar cells, biomedicine, sensors, environments, etc. are described sequentially. Thereafter, we present the theoretic calculations and simulations of 2D materials. Finally, after concluding the current progress, we provide some personal discussions on the existing challenges and future outlooks in this rapidly developing field. ","lang":"eng"}],"doi":"10.3866/PKU.WHXB202108017","issue":"12","article_type":"review"},{"day":"01","abstract":[{"lang":"eng","text":"We consider the Fröhlich Hamiltonian with large coupling constant α. For initial data of Pekar product form with coherent phonon field and with the electron minimizing the corresponding energy, we provide a norm approximation of the evolution, valid up to times of order α2. The approximation is given in terms of a Pekar product state, evolved through the Landau-Pekar equations, corrected by a Bogoliubov dynamics taking quantum fluctuations into account. This allows us to show that the Landau-Pekar equations approximately describe the evolution of the electron- and one-phonon reduced density matrices under the Fröhlich dynamics up to times of order α2."}],"arxiv":1,"author":[{"id":"4BC40BEC-F248-11E8-B48F-1D18A9856A87","last_name":"Leopold","full_name":"Leopold, Nikolai K","first_name":"Nikolai K","orcid":"0000-0002-0495-6822"},{"first_name":"David Johannes","full_name":"Mitrouskas, David Johannes","last_name":"Mitrouskas","id":"cbddacee-2b11-11eb-a02e-a2e14d04e52d"},{"last_name":"Rademacher","id":"856966FE-A408-11E9-977E-802DE6697425","orcid":"0000-0001-5059-4466","full_name":"Rademacher, Simone Anna Elvira","first_name":"Simone Anna Elvira"},{"last_name":"Schlein","full_name":"Schlein, Benjamin","first_name":"Benjamin"},{"orcid":"0000-0002-6781-0521","full_name":"Seiringer, Robert","first_name":"Robert","last_name":"Seiringer","id":"4AFD0470-F248-11E8-B48F-1D18A9856A87"}],"oa":1,"date_published":"2021-10-01T00:00:00Z","acknowledgement":"Financial support by the European Union’s Horizon 2020 research and innovation programme\r\nunder the Marie Skłodowska-Curie grant agreement No. 754411 (S.R.) and the European\r\nResearch Council under grant agreement No. 694227 (N.L. and R.S.), as well as by the SNSF\r\nEccellenza project PCEFP2 181153 (N.L.), the NCCR SwissMAP (N.L. and B.S.) and by the\r\nDeutsche Forschungsgemeinschaft (DFG) through the Research Training Group 1838: Spectral\r\nTheory and Dynamics of Quantum Systems (D.M.) is gratefully acknowledged. B.S. gratefully\r\nacknowledges financial support from the Swiss National Science Foundation through the Grant\r\n“Dynamical and energetic properties of Bose-Einstein condensates” and from the European\r\nResearch Council through the ERC-AdG CLaQS (grant agreement No 834782). D.M. thanks\r\nMarcel Griesemer for helpful discussions.","issue":"4","article_type":"original","doi":"10.2140/paa.2021.3.653","title":"Landau–Pekar equations and quantum fluctuations for the dynamics of a strongly coupled polaron","external_id":{"arxiv":["2005.02098"]},"publication_identifier":{"eissn":["2578-5885"],"issn":["2578-5893"]},"year":"2021","date_created":"2024-01-28T23:01:43Z","intvolume":"         3","publisher":"Mathematical Sciences Publishers","article_processing_charge":"No","citation":{"short":"N.K. Leopold, D.J. Mitrouskas, S.A.E. Rademacher, B. Schlein, R. Seiringer, Pure and Applied Analysis 3 (2021) 653–676.","ama":"Leopold NK, Mitrouskas DJ, Rademacher SAE, Schlein B, Seiringer R. Landau–Pekar equations and quantum fluctuations for the dynamics of a strongly coupled polaron. <i>Pure and Applied Analysis</i>. 2021;3(4):653-676. doi:<a href=\"https://doi.org/10.2140/paa.2021.3.653\">10.2140/paa.2021.3.653</a>","mla":"Leopold, Nikolai K., et al. “Landau–Pekar Equations and Quantum Fluctuations for the Dynamics of a Strongly Coupled Polaron.” <i>Pure and Applied Analysis</i>, vol. 3, no. 4, Mathematical Sciences Publishers, 2021, pp. 653–76, doi:<a href=\"https://doi.org/10.2140/paa.2021.3.653\">10.2140/paa.2021.3.653</a>.","ieee":"N. K. Leopold, D. J. Mitrouskas, S. A. E. Rademacher, B. Schlein, and R. Seiringer, “Landau–Pekar equations and quantum fluctuations for the dynamics of a strongly coupled polaron,” <i>Pure and Applied Analysis</i>, vol. 3, no. 4. Mathematical Sciences Publishers, pp. 653–676, 2021.","ista":"Leopold NK, Mitrouskas DJ, Rademacher SAE, Schlein B, Seiringer R. 2021. Landau–Pekar equations and quantum fluctuations for the dynamics of a strongly coupled polaron. Pure and Applied Analysis. 3(4), 653–676.","apa":"Leopold, N. K., Mitrouskas, D. J., Rademacher, S. A. E., Schlein, B., &#38; Seiringer, R. (2021). Landau–Pekar equations and quantum fluctuations for the dynamics of a strongly coupled polaron. <i>Pure and Applied Analysis</i>. Mathematical Sciences Publishers. <a href=\"https://doi.org/10.2140/paa.2021.3.653\">https://doi.org/10.2140/paa.2021.3.653</a>","chicago":"Leopold, Nikolai K, David Johannes Mitrouskas, Simone Anna Elvira Rademacher, Benjamin Schlein, and Robert Seiringer. “Landau–Pekar Equations and Quantum Fluctuations for the Dynamics of a Strongly Coupled Polaron.” <i>Pure and Applied Analysis</i>. Mathematical Sciences Publishers, 2021. <a href=\"https://doi.org/10.2140/paa.2021.3.653\">https://doi.org/10.2140/paa.2021.3.653</a>."},"project":[{"call_identifier":"H2020","grant_number":"754411","_id":"260C2330-B435-11E9-9278-68D0E5697425","name":"ISTplus - Postdoctoral Fellowships"},{"_id":"25C6DC12-B435-11E9-9278-68D0E5697425","name":"Analysis of quantum many-body systems","call_identifier":"H2020","grant_number":"694227"}],"publication":"Pure and Applied Analysis","language":[{"iso":"eng"}],"department":[{"_id":"RoSe"}],"type":"journal_article","scopus_import":"1","corr_author":"1","ec_funded":1,"main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2005.02098","open_access":"1"}],"date_updated":"2025-04-14T07:27:00Z","status":"public","month":"10","volume":3,"publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"14889","page":"653-676","oa_version":"Preprint","quality_controlled":"1"},{"doi":"10.2140/paa.2021.3.677","article_type":"original","issue":"4","acknowledgement":"We are grateful for the hospitality of Central China Normal University (CCNU),\r\nwhere parts of this work were done, and thank Phan Th`anh Nam, Simone\r\nRademacher, Robert Seiringer and Stefan Teufel for helpful discussions. L.B. gratefully acknowledges the support by the German Research Foundation (DFG) within the Research\r\nTraining Group 1838 “Spectral Theory and Dynamics of Quantum Systems”, and the funding\r\nfrom the European Union’s Horizon 2020 research and innovation programme under the Marie\r\nSk lodowska-Curie Grant Agreement No. 754411.","date_published":"2021-10-01T00:00:00Z","oa":1,"arxiv":1,"author":[{"first_name":"Lea","full_name":"Bossmann, Lea","orcid":"0000-0002-6854-1343","id":"A2E3BCBE-5FCC-11E9-AA4B-76F3E5697425","last_name":"Bossmann"},{"last_name":"Petrat","id":"40AC02DC-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-9166-5889","full_name":"Petrat, Sören P","first_name":"Sören P"},{"first_name":"Peter","full_name":"Pickl, Peter","last_name":"Pickl"},{"last_name":"Soffer","first_name":"Avy","full_name":"Soffer, Avy"}],"abstract":[{"text":"We consider a system of N interacting bosons in the mean-field scaling regime and construct corrections to the Bogoliubov dynamics that approximate the true N-body dynamics in norm to arbitrary precision. The N-independent corrections are given in terms of the solutions of the Bogoliubov and Hartree equations and satisfy a generalized form of Wick's theorem. We determine the n-point correlation functions of the excitations around the condensate, as well as the reduced densities of the N-body system, to arbitrary accuracy, given only the knowledge of the two-point functions of a quasi-free state and the solution of the Hartree equation. In this way, the complex problem of computing all n-point correlation functions for an interacting N-body system is essentially reduced to the problem of solving the Hartree equation and the PDEs for the Bogoliubov two-point functions.","lang":"eng"}],"day":"01","citation":{"apa":"Bossmann, L., Petrat, S. P., Pickl, P., &#38; Soffer, A. (2021). Beyond Bogoliubov dynamics. <i>Pure and Applied Analysis</i>. Mathematical Sciences Publishers. <a href=\"https://doi.org/10.2140/paa.2021.3.677\">https://doi.org/10.2140/paa.2021.3.677</a>","chicago":"Bossmann, Lea, Sören P Petrat, Peter Pickl, and Avy Soffer. “Beyond Bogoliubov Dynamics.” <i>Pure and Applied Analysis</i>. Mathematical Sciences Publishers, 2021. <a href=\"https://doi.org/10.2140/paa.2021.3.677\">https://doi.org/10.2140/paa.2021.3.677</a>.","ieee":"L. Bossmann, S. P. Petrat, P. Pickl, and A. Soffer, “Beyond Bogoliubov dynamics,” <i>Pure and Applied Analysis</i>, vol. 3, no. 4. Mathematical Sciences Publishers, pp. 677–726, 2021.","ista":"Bossmann L, Petrat SP, Pickl P, Soffer A. 2021. Beyond Bogoliubov dynamics. Pure and Applied Analysis. 3(4), 677–726.","mla":"Bossmann, Lea, et al. “Beyond Bogoliubov Dynamics.” <i>Pure and Applied Analysis</i>, vol. 3, no. 4, Mathematical Sciences Publishers, 2021, pp. 677–726, doi:<a href=\"https://doi.org/10.2140/paa.2021.3.677\">10.2140/paa.2021.3.677</a>.","ama":"Bossmann L, Petrat SP, Pickl P, Soffer A. Beyond Bogoliubov dynamics. <i>Pure and Applied Analysis</i>. 2021;3(4):677-726. doi:<a href=\"https://doi.org/10.2140/paa.2021.3.677\">10.2140/paa.2021.3.677</a>","short":"L. Bossmann, S.P. Petrat, P. Pickl, A. Soffer, Pure and Applied Analysis 3 (2021) 677–726."},"publisher":"Mathematical Sciences Publishers","article_processing_charge":"No","intvolume":"         3","date_created":"2024-01-28T23:01:43Z","year":"2021","publication_identifier":{"issn":["2578-5893"],"eissn":["2578-5885"]},"external_id":{"arxiv":["1912.11004"]},"title":"Beyond Bogoliubov dynamics","ec_funded":1,"scopus_import":"1","corr_author":"1","type":"journal_article","department":[{"_id":"RoSe"}],"language":[{"iso":"eng"}],"publication":"Pure and Applied Analysis","project":[{"_id":"260C2330-B435-11E9-9278-68D0E5697425","name":"ISTplus - Postdoctoral Fellowships","grant_number":"754411","call_identifier":"H2020"}],"quality_controlled":"1","_id":"14890","page":"677-726","oa_version":"Preprint","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_status":"published","volume":3,"month":"10","status":"public","date_updated":"2025-04-14T07:44:02Z","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.1912.11004","open_access":"1"}]},{"intvolume":"         2","year":"2021","date_created":"2024-02-14T12:05:50Z","publication_identifier":{"eisbn":["9780470015902"],"isbn":["9780470016176"]},"month":"05","publication_status":"published","volume":2,"title":"Hybrid Zones","date_updated":"2024-10-09T21:08:11Z","status":"public","citation":{"mla":"Stankowski, Sean, et al. “Hybrid Zones.” <i>Encyclopedia of Life Sciences</i>, vol. 2, Wiley, 2021, doi:<a href=\"https://doi.org/10.1002/9780470015902.a0029355\">10.1002/9780470015902.a0029355</a>.","ama":"Stankowski S, Shipilina D, Westram AM. Hybrid Zones. In: <i>Encyclopedia of Life Sciences</i>. Vol 2. eLS. Wiley; 2021. doi:<a href=\"https://doi.org/10.1002/9780470015902.a0029355\">10.1002/9780470015902.a0029355</a>","short":"S. Stankowski, D. Shipilina, A.M. Westram, in:, Encyclopedia of Life Sciences, Wiley, 2021.","chicago":"Stankowski, Sean, Daria Shipilina, and Anja M Westram. “Hybrid Zones.” In <i>Encyclopedia of Life Sciences</i>, Vol. 2. ELS. Wiley, 2021. <a href=\"https://doi.org/10.1002/9780470015902.a0029355\">https://doi.org/10.1002/9780470015902.a0029355</a>.","apa":"Stankowski, S., Shipilina, D., &#38; Westram, A. M. (2021). Hybrid Zones. In <i>Encyclopedia of Life Sciences</i> (Vol. 2). Wiley. <a href=\"https://doi.org/10.1002/9780470015902.a0029355\">https://doi.org/10.1002/9780470015902.a0029355</a>","ista":"Stankowski S, Shipilina D, Westram AM. 2021.Hybrid Zones. In: Encyclopedia of Life Sciences. vol. 2.","ieee":"S. Stankowski, D. Shipilina, and A. M. Westram, “Hybrid Zones,” in <i>Encyclopedia of Life Sciences</i>, vol. 2, Wiley, 2021."},"quality_controlled":"1","publisher":"Wiley","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"14984","oa_version":"None","series_title":"eLS","date_published":"2021-05-28T00:00:00Z","language":[{"iso":"eng"}],"author":[{"full_name":"Stankowski, Sean","first_name":"Sean","last_name":"Stankowski","id":"43161670-5719-11EA-8025-FABC3DDC885E"},{"last_name":"Shipilina","id":"428A94B0-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-1145-9226","full_name":"Shipilina, Daria","first_name":"Daria"},{"id":"3C147470-F248-11E8-B48F-1D18A9856A87","last_name":"Westram","full_name":"Westram, Anja M","first_name":"Anja M","orcid":"0000-0003-1050-4969"}],"publication":"Encyclopedia of Life Sciences","abstract":[{"text":"Hybrid zones are narrow geographic regions where different populations, races or interbreeding species meet and mate, producing mixed ‘hybrid’ offspring. They are relatively common and can be found in a diverse range of organisms and environments. The study of hybrid zones has played an important role in our understanding of the origin of species, with hybrid zones having been described as ‘natural laboratories’. This is because they allow us to study,in situ, the conditions and evolutionary forces that enable divergent taxa to remain distinct despite some ongoing gene exchange between them.","lang":"eng"}],"day":"28","doi":"10.1002/9780470015902.a0029355","corr_author":"1","type":"book_chapter","department":[{"_id":"NiBa"}]},{"editor":[{"first_name":"Katsushi","full_name":"Ikeuchi, Katsushi","last_name":"Ikeuchi"}],"place":"Cham","abstract":[{"lang":"eng","text":"The goal of zero-shot learning is to construct a classifier that can identify object classes for which no training examples are available. When training data for some of the object classes is available but not for others, the name generalized zero-shot learning is commonly used.\r\nIn a wider sense, the phrase zero-shot is also used to describe other machine learning-based approaches that require no training data from the problem of interest, such as zero-shot action recognition or zero-shot machine translation."}],"publication":"Computer Vision","day":"13","date_published":"2021-10-13T00:00:00Z","edition":"2","author":[{"first_name":"Christoph","full_name":"Lampert, Christoph","orcid":"0000-0001-8622-7887","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87","last_name":"Lampert"}],"language":[{"iso":"eng"}],"type":"book_chapter","department":[{"_id":"ChLa"}],"doi":"10.1007/978-3-030-63416-2_874","corr_author":"1","title":"Zero-Shot Learning","status":"public","date_updated":"2024-10-09T21:08:12Z","year":"2021","date_created":"2024-02-14T14:05:32Z","publication_status":"published","month":"10","publication_identifier":{"eisbn":["9783030634162"],"isbn":["9783030634155"]},"_id":"14987","page":"1395-1397","oa_version":"None","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","quality_controlled":"1","citation":{"apa":"Lampert, C. (2021). Zero-Shot Learning. In K. Ikeuchi (Ed.), <i>Computer Vision</i> (2nd ed., pp. 1395–1397). Cham: Springer. <a href=\"https://doi.org/10.1007/978-3-030-63416-2_874\">https://doi.org/10.1007/978-3-030-63416-2_874</a>","chicago":"Lampert, Christoph. “Zero-Shot Learning.” In <i>Computer Vision</i>, edited by Katsushi Ikeuchi, 2nd ed., 1395–97. Cham: Springer, 2021. <a href=\"https://doi.org/10.1007/978-3-030-63416-2_874\">https://doi.org/10.1007/978-3-030-63416-2_874</a>.","ista":"Lampert C. 2021.Zero-Shot Learning. In: Computer Vision. , 1395–1397.","ieee":"C. Lampert, “Zero-Shot Learning,” in <i>Computer Vision</i>, 2nd ed., K. Ikeuchi, Ed. Cham: Springer, 2021, pp. 1395–1397.","mla":"Lampert, Christoph. “Zero-Shot Learning.” <i>Computer Vision</i>, edited by Katsushi Ikeuchi, 2nd ed., Springer, 2021, pp. 1395–97, doi:<a href=\"https://doi.org/10.1007/978-3-030-63416-2_874\">10.1007/978-3-030-63416-2_874</a>.","ama":"Lampert C. Zero-Shot Learning. In: Ikeuchi K, ed. <i>Computer Vision</i>. 2nd ed. Cham: Springer; 2021:1395-1397. doi:<a href=\"https://doi.org/10.1007/978-3-030-63416-2_874\">10.1007/978-3-030-63416-2_874</a>","short":"C. Lampert, in:, K. Ikeuchi (Ed.), Computer Vision, 2nd ed., Springer, Cham, 2021, pp. 1395–1397."},"publisher":"Springer","article_processing_charge":"No"},{"oa":1,"author":[{"last_name":"Johnson","id":"46A62C3A-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-2739-8843","full_name":"Johnson, Alexander J","first_name":"Alexander J"}],"date_published":"2021-12-01T00:00:00Z","day":"01","abstract":[{"text":"Raw data generated from the publication - The TPLATE complex mediates membrane bending during plant clathrin-mediated endocytosis by Johnson et al., 2021 In PNAS","lang":"eng"}],"corr_author":"1","doi":"10.5281/ZENODO.5747100","department":[{"_id":"JiFr"}],"type":"research_data_reference","month":"12","year":"2021","date_created":"2024-02-14T14:13:48Z","has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"main_file_link":[{"open_access":"1","url":"https://doi.org/10.5281/zenodo.5747100"}],"title":"Raw data from Johnson et al, PNAS, 2021","status":"public","date_updated":"2025-05-14T09:25:33Z","article_processing_charge":"No","publisher":"Zenodo","related_material":{"record":[{"status":"public","id":"9887","relation":"used_in_publication"}]},"citation":{"short":"A.J. Johnson, (2021).","ama":"Johnson AJ. Raw data from Johnson et al, PNAS, 2021. 2021. doi:<a href=\"https://doi.org/10.5281/ZENODO.5747100\">10.5281/ZENODO.5747100</a>","mla":"Johnson, Alexander J. <i>Raw Data from Johnson et Al, PNAS, 2021</i>. Zenodo, 2021, doi:<a href=\"https://doi.org/10.5281/ZENODO.5747100\">10.5281/ZENODO.5747100</a>.","ieee":"A. J. Johnson, “Raw data from Johnson et al, PNAS, 2021.” Zenodo, 2021.","ista":"Johnson AJ. 2021. Raw data from Johnson et al, PNAS, 2021, Zenodo, <a href=\"https://doi.org/10.5281/ZENODO.5747100\">10.5281/ZENODO.5747100</a>.","apa":"Johnson, A. J. (2021). Raw data from Johnson et al, PNAS, 2021. Zenodo. <a href=\"https://doi.org/10.5281/ZENODO.5747100\">https://doi.org/10.5281/ZENODO.5747100</a>","chicago":"Johnson, Alexander J. “Raw Data from Johnson et Al, PNAS, 2021.” Zenodo, 2021. <a href=\"https://doi.org/10.5281/ZENODO.5747100\">https://doi.org/10.5281/ZENODO.5747100</a>."},"ddc":["580"],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"14988","oa_version":"Published Version"},{"doi":"10.2140/pmp.2021.2.221","issue":"2","acknowledgement":"Partially supported by ERC Starting Grant RandMat No. 715539 and the SwissMap grant of Swiss National Science Foundation. Partially supported by ERC Advanced Grant RanMat No. 338804. Partially supported by the Hausdorff Center for Mathematics in Bonn.","article_type":"original","oa":1,"author":[{"last_name":"Alt","id":"36D3D8B6-F248-11E8-B48F-1D18A9856A87","full_name":"Alt, Johannes","first_name":"Johannes"},{"id":"4DBD5372-F248-11E8-B48F-1D18A9856A87","last_name":"Erdös","first_name":"László","full_name":"Erdös, László","orcid":"0000-0001-5366-9603"},{"id":"3020C786-F248-11E8-B48F-1D18A9856A87","last_name":"Krüger","first_name":"Torben H","full_name":"Krüger, Torben H","orcid":"0000-0002-4821-3297"}],"arxiv":1,"date_published":"2021-05-21T00:00:00Z","day":"21","abstract":[{"text":"We consider random n×n matrices X with independent and centered entries and a general variance profile. We show that the spectral radius of X converges with very high probability to the square root of the spectral radius of the variance matrix of X when n tends to infinity. We also establish the optimal rate of convergence, that is a new result even for general i.i.d. matrices beyond the explicitly solvable Gaussian cases. The main ingredient is the proof of the local inhomogeneous circular law [arXiv:1612.07776] at the spectral edge.","lang":"eng"}],"article_processing_charge":"No","publisher":"Mathematical Sciences Publishers","citation":{"ama":"Alt J, Erdös L, Krüger TH. Spectral radius of random matrices with independent entries. <i>Probability and Mathematical Physics</i>. 2021;2(2):221-280. doi:<a href=\"https://doi.org/10.2140/pmp.2021.2.221\">10.2140/pmp.2021.2.221</a>","mla":"Alt, Johannes, et al. “Spectral Radius of Random Matrices with Independent Entries.” <i>Probability and Mathematical Physics</i>, vol. 2, no. 2, Mathematical Sciences Publishers, 2021, pp. 221–80, doi:<a href=\"https://doi.org/10.2140/pmp.2021.2.221\">10.2140/pmp.2021.2.221</a>.","short":"J. Alt, L. Erdös, T.H. Krüger, Probability and Mathematical Physics 2 (2021) 221–280.","chicago":"Alt, Johannes, László Erdös, and Torben H Krüger. “Spectral Radius of Random Matrices with Independent Entries.” <i>Probability and Mathematical Physics</i>. Mathematical Sciences Publishers, 2021. <a href=\"https://doi.org/10.2140/pmp.2021.2.221\">https://doi.org/10.2140/pmp.2021.2.221</a>.","apa":"Alt, J., Erdös, L., &#38; Krüger, T. H. (2021). Spectral radius of random matrices with independent entries. <i>Probability and Mathematical Physics</i>. Mathematical Sciences Publishers. <a href=\"https://doi.org/10.2140/pmp.2021.2.221\">https://doi.org/10.2140/pmp.2021.2.221</a>","ieee":"J. Alt, L. Erdös, and T. H. Krüger, “Spectral radius of random matrices with independent entries,” <i>Probability and Mathematical Physics</i>, vol. 2, no. 2. Mathematical Sciences Publishers, pp. 221–280, 2021.","ista":"Alt J, Erdös L, Krüger TH. 2021. Spectral radius of random matrices with independent entries. Probability and Mathematical Physics. 2(2), 221–280."},"publication_identifier":{"issn":["2690-0998"],"eissn":["2690-1005"]},"external_id":{"arxiv":["1907.13631"]},"intvolume":"         2","year":"2021","date_created":"2024-02-18T23:01:03Z","title":"Spectral radius of random matrices with independent entries","corr_author":"1","scopus_import":"1","ec_funded":1,"department":[{"_id":"LaEr"}],"type":"journal_article","language":[{"iso":"eng"}],"project":[{"call_identifier":"FP7","grant_number":"338804","name":"Random matrices, universality and disordered quantum systems","_id":"258DCDE6-B435-11E9-9278-68D0E5697425"}],"publication":"Probability and Mathematical Physics","quality_controlled":"1","_id":"15013","page":"221-280","oa_version":"Preprint","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":2,"publication_status":"published","month":"05","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.1907.13631","open_access":"1"}],"status":"public","date_updated":"2025-04-15T08:05:02Z"},{"scopus_import":"1","type":"journal_article","language":[{"iso":"eng"}],"publication":"Nature Communications","keyword":["General Physics and Astronomy","General Biochemistry","Genetics and Molecular Biology","General Chemistry","Multidisciplinary"],"article_number":"5033","quality_controlled":"1","_id":"15137","oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":12,"month":"08","publication_status":"published","status":"public","date_updated":"2024-06-04T06:11:54Z","main_file_link":[{"url":"https://doi.org/10.1038/s41467-021-25337-5","open_access":"1"}],"doi":"10.1038/s41467-021-25337-5","article_type":"original","date_published":"2021-08-19T00:00:00Z","author":[{"last_name":"Steens","first_name":"Jurre A.","full_name":"Steens, Jurre A."},{"first_name":"Yifan","full_name":"Zhu, Yifan","last_name":"Zhu"},{"full_name":"Taylor, David W.","first_name":"David W.","last_name":"Taylor"},{"full_name":"Bravo, Jack Peter Kelly","first_name":"Jack Peter Kelly","orcid":"0000-0003-0456-0753","id":"96aecfa5-8931-11ee-af30-aa6a5d6eee0e","last_name":"Bravo"},{"first_name":"Stijn H. P.","full_name":"Prinsen, Stijn H. P.","last_name":"Prinsen"},{"first_name":"Cor D.","full_name":"Schoen, Cor D.","last_name":"Schoen"},{"full_name":"Keijser, Bart J. F.","first_name":"Bart J. F.","last_name":"Keijser"},{"last_name":"Ossendrijver","first_name":"Michel","full_name":"Ossendrijver, Michel"},{"first_name":"L. Marije","full_name":"Hofstra, L. Marije","last_name":"Hofstra"},{"first_name":"Stan J. J.","full_name":"Brouns, Stan J. J.","last_name":"Brouns"},{"full_name":"Shinkai, Akeo","first_name":"Akeo","last_name":"Shinkai"},{"full_name":"van der Oost, John","first_name":"John","last_name":"van der Oost"},{"last_name":"Staals","full_name":"Staals, Raymond H. J.","first_name":"Raymond H. J."}],"oa":1,"abstract":[{"text":"Characteristic properties of type III CRISPR-Cas systems include recognition of target RNA and the subsequent induction of a multifaceted immune response. This involves sequence-specific cleavage of the target RNA and production of cyclic oligoadenylate (cOA) molecules. Here we report that an exposed seed region at the 3′ end of the crRNA is essential for target RNA binding and cleavage, whereas cOA production requires base pairing at the 5′ end of the crRNA. Moreover, we uncover that the variation in the size and composition of type III complexes within a single host results in variable seed regions. This may prevent escape by invading genetic elements, while controlling cOA production tightly to prevent unnecessary damage to the host. Lastly, we use these findings to develop a new diagnostic tool, SCOPE, for the specific detection of SARS-CoV-2 from human nasal swab samples, revealing sensitivities in the atto-molar range.","lang":"eng"}],"day":"19","citation":{"mla":"Steens, Jurre A., et al. “SCOPE Enables Type III CRISPR-Cas Diagnostics Using Flexible Targeting and Stringent CARF Ribonuclease Activation.” <i>Nature Communications</i>, vol. 12, 5033, Springer Nature, 2021, doi:<a href=\"https://doi.org/10.1038/s41467-021-25337-5\">10.1038/s41467-021-25337-5</a>.","ama":"Steens JA, Zhu Y, Taylor DW, et al. SCOPE enables type III CRISPR-Cas diagnostics using flexible targeting and stringent CARF ribonuclease activation. <i>Nature Communications</i>. 2021;12. doi:<a href=\"https://doi.org/10.1038/s41467-021-25337-5\">10.1038/s41467-021-25337-5</a>","short":"J.A. Steens, Y. Zhu, D.W. Taylor, J.P.K. Bravo, S.H.P. Prinsen, C.D. Schoen, B.J.F. Keijser, M. Ossendrijver, L.M. Hofstra, S.J.J. Brouns, A. Shinkai, J. van der Oost, R.H.J. Staals, Nature Communications 12 (2021).","chicago":"Steens, Jurre A., Yifan Zhu, David W. Taylor, Jack Peter Kelly Bravo, Stijn H. P. Prinsen, Cor D. Schoen, Bart J. F. Keijser, et al. “SCOPE Enables Type III CRISPR-Cas Diagnostics Using Flexible Targeting and Stringent CARF Ribonuclease Activation.” <i>Nature Communications</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1038/s41467-021-25337-5\">https://doi.org/10.1038/s41467-021-25337-5</a>.","apa":"Steens, J. A., Zhu, Y., Taylor, D. W., Bravo, J. P. K., Prinsen, S. H. P., Schoen, C. D., … Staals, R. H. J. (2021). SCOPE enables type III CRISPR-Cas diagnostics using flexible targeting and stringent CARF ribonuclease activation. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-021-25337-5\">https://doi.org/10.1038/s41467-021-25337-5</a>","ieee":"J. A. Steens <i>et al.</i>, “SCOPE enables type III CRISPR-Cas diagnostics using flexible targeting and stringent CARF ribonuclease activation,” <i>Nature Communications</i>, vol. 12. Springer Nature, 2021.","ista":"Steens JA, Zhu Y, Taylor DW, Bravo JPK, Prinsen SHP, Schoen CD, Keijser BJF, Ossendrijver M, Hofstra LM, Brouns SJJ, Shinkai A, van der Oost J, Staals RHJ. 2021. SCOPE enables type III CRISPR-Cas diagnostics using flexible targeting and stringent CARF ribonuclease activation. Nature Communications. 12, 5033."},"extern":"1","article_processing_charge":"Yes","publisher":"Springer Nature","year":"2021","date_created":"2024-03-20T10:42:33Z","intvolume":"        12","external_id":{"pmid":["34413302"]},"publication_identifier":{"issn":["2041-1723"]},"pmid":1,"title":"SCOPE enables type III CRISPR-Cas diagnostics using flexible targeting and stringent CARF ribonuclease activation"},{"publication_identifier":{"eissn":["1460-2075"],"issn":["0261-4189"]},"external_id":{"pmid":["34524703"]},"intvolume":"        40","year":"2021","date_created":"2024-03-20T10:42:39Z","title":"Liquid–liquid phase separation underpins the formation of replication factories in rotaviruses","pmid":1,"article_processing_charge":"Yes","publisher":"Embo Press","citation":{"mla":"Geiger, Florian, et al. “Liquid–Liquid Phase Separation Underpins the Formation of Replication Factories in Rotaviruses.” <i>The EMBO Journal</i>, vol. 40, no. 21, e107711, Embo Press, 2021, doi:<a href=\"https://doi.org/10.15252/embj.2021107711\">10.15252/embj.2021107711</a>.","ama":"Geiger F, Acker J, Papa G, et al. Liquid–liquid phase separation underpins the formation of replication factories in rotaviruses. <i>The EMBO Journal</i>. 2021;40(21). doi:<a href=\"https://doi.org/10.15252/embj.2021107711\">10.15252/embj.2021107711</a>","short":"F. Geiger, J. Acker, G. Papa, X. Wang, W.E. Arter, K.L. Saar, N.A. Erkamp, R. Qi, J.P.K. Bravo, S. Strauss, G. Krainer, O.R. Burrone, R. Jungmann, T.P. Knowles, H. Engelke, A. Borodavka, The EMBO Journal 40 (2021).","chicago":"Geiger, Florian, Julia Acker, Guido Papa, Xinyu Wang, William E Arter, Kadi L Saar, Nadia A Erkamp, et al. “Liquid–Liquid Phase Separation Underpins the Formation of Replication Factories in Rotaviruses.” <i>The EMBO Journal</i>. Embo Press, 2021. <a href=\"https://doi.org/10.15252/embj.2021107711\">https://doi.org/10.15252/embj.2021107711</a>.","apa":"Geiger, F., Acker, J., Papa, G., Wang, X., Arter, W. E., Saar, K. L., … Borodavka, A. (2021). Liquid–liquid phase separation underpins the formation of replication factories in rotaviruses. <i>The EMBO Journal</i>. Embo Press. <a href=\"https://doi.org/10.15252/embj.2021107711\">https://doi.org/10.15252/embj.2021107711</a>","ieee":"F. Geiger <i>et al.</i>, “Liquid–liquid phase separation underpins the formation of replication factories in rotaviruses,” <i>The EMBO Journal</i>, vol. 40, no. 21. Embo Press, 2021.","ista":"Geiger F, Acker J, Papa G, Wang X, Arter WE, Saar KL, Erkamp NA, Qi R, Bravo JPK, Strauss S, Krainer G, Burrone OR, Jungmann R, Knowles TP, Engelke H, Borodavka A. 2021. Liquid–liquid phase separation underpins the formation of replication factories in rotaviruses. The EMBO Journal. 40(21), e107711."},"extern":"1","oa":1,"author":[{"last_name":"Geiger","full_name":"Geiger, Florian","first_name":"Florian"},{"first_name":"Julia","full_name":"Acker, Julia","last_name":"Acker"},{"last_name":"Papa","full_name":"Papa, Guido","first_name":"Guido"},{"first_name":"Xinyu","full_name":"Wang, Xinyu","last_name":"Wang"},{"last_name":"Arter","first_name":"William E","full_name":"Arter, William E"},{"first_name":"Kadi L","full_name":"Saar, Kadi L","last_name":"Saar"},{"last_name":"Erkamp","first_name":"Nadia A","full_name":"Erkamp, Nadia A"},{"last_name":"Qi","full_name":"Qi, Runzhang","first_name":"Runzhang"},{"last_name":"Bravo","id":"96aecfa5-8931-11ee-af30-aa6a5d6eee0e","orcid":"0000-0003-0456-0753","full_name":"Bravo, Jack Peter Kelly","first_name":"Jack Peter Kelly"},{"full_name":"Strauss, Sebastian","first_name":"Sebastian","last_name":"Strauss"},{"last_name":"Krainer","first_name":"Georg","full_name":"Krainer, Georg"},{"full_name":"Burrone, Oscar R","first_name":"Oscar R","last_name":"Burrone"},{"first_name":"Ralf","full_name":"Jungmann, Ralf","last_name":"Jungmann"},{"first_name":"Tuomas PJ","full_name":"Knowles, Tuomas PJ","last_name":"Knowles"},{"last_name":"Engelke","first_name":"Hanna","full_name":"Engelke, Hanna"},{"first_name":"Alexander","full_name":"Borodavka, Alexander","last_name":"Borodavka"}],"date_published":"2021-11-02T00:00:00Z","day":"02","abstract":[{"text":"RNA viruses induce the formation of subcellular organelles that provide microenvironments conducive to their replication. Here we show that replication factories of rotaviruses represent protein‐RNA condensates that are formed via liquid–liquid phase separation of the viroplasm‐forming proteins NSP5 and rotavirus RNA chaperone NSP2. Upon mixing, these proteins readily form condensates at physiologically relevant low micromolar concentrations achieved in the cytoplasm of virus‐infected cells. Early infection stage condensates could be reversibly dissolved by 1,6‐hexanediol, as well as propylene glycol that released rotavirus transcripts from these condensates. During the early stages of infection, propylene glycol treatments reduced viral replication and phosphorylation of the condensate‐forming protein NSP5. During late infection, these condensates exhibited altered material properties and became resistant to propylene glycol, coinciding with hyperphosphorylation of NSP5. Some aspects of the assembly of cytoplasmic rotavirus replication factories mirror the formation of other ribonucleoprotein granules. Such viral RNA‐rich condensates that support replication of multi‐segmented genomes represent an attractive target for developing novel therapeutic approaches.","lang":"eng"}],"doi":"10.15252/embj.2021107711","issue":"21","article_type":"original","month":"11","volume":40,"publication_status":"published","main_file_link":[{"url":"https://doi.org/10.15252/embj.2021107711","open_access":"1"}],"date_updated":"2024-06-04T06:08:16Z","status":"public","quality_controlled":"1","article_number":"e107711","_id":"15138","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","language":[{"iso":"eng"}],"publication":"The EMBO Journal","keyword":["General Immunology and Microbiology","General Biochemistry","Genetics and Molecular Biology","Molecular Biology","General Neuroscience"],"scopus_import":"1","type":"journal_article"},{"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"15139","oa_version":"Published Version","article_number":"e2100198118","quality_controlled":"1","main_file_link":[{"url":"https://doi.org/10.1073/pnas.2100198118","open_access":"1"}],"date_updated":"2024-06-04T06:04:07Z","status":"public","publication_status":"published","month":"10","volume":118,"type":"journal_article","scopus_import":"1","publication":"Proceedings of the National Academy of Sciences","language":[{"iso":"eng"}],"publisher":"Proceedings of the National Academy of Sciences","article_processing_charge":"No","extern":"1","citation":{"apa":"Bravo, J. P. K., Bartnik, K., Venditti, L., Acker, J., Gail, E. H., Colyer, A., … Borodavka, A. (2021). Structural basis of rotavirus RNA chaperone displacement and RNA annealing. <i>Proceedings of the National Academy of Sciences</i>. Proceedings of the National Academy of Sciences. <a href=\"https://doi.org/10.1073/pnas.2100198118\">https://doi.org/10.1073/pnas.2100198118</a>","chicago":"Bravo, Jack Peter Kelly, Kira Bartnik, Luca Venditti, Julia Acker, Emma H. Gail, Alice Colyer, Chen Davidovich, et al. “Structural Basis of Rotavirus RNA Chaperone Displacement and RNA Annealing.” <i>Proceedings of the National Academy of Sciences</i>. Proceedings of the National Academy of Sciences, 2021. <a href=\"https://doi.org/10.1073/pnas.2100198118\">https://doi.org/10.1073/pnas.2100198118</a>.","ista":"Bravo JPK, Bartnik K, Venditti L, Acker J, Gail EH, Colyer A, Davidovich C, Lamb DC, Tuma R, Calabrese AN, Borodavka A. 2021. Structural basis of rotavirus RNA chaperone displacement and RNA annealing. Proceedings of the National Academy of Sciences. 118(41), e2100198118.","ieee":"J. P. K. Bravo <i>et al.</i>, “Structural basis of rotavirus RNA chaperone displacement and RNA annealing,” <i>Proceedings of the National Academy of Sciences</i>, vol. 118, no. 41. Proceedings of the National Academy of Sciences, 2021.","mla":"Bravo, Jack Peter Kelly, et al. “Structural Basis of Rotavirus RNA Chaperone Displacement and RNA Annealing.” <i>Proceedings of the National Academy of Sciences</i>, vol. 118, no. 41, e2100198118, Proceedings of the National Academy of Sciences, 2021, doi:<a href=\"https://doi.org/10.1073/pnas.2100198118\">10.1073/pnas.2100198118</a>.","ama":"Bravo JPK, Bartnik K, Venditti L, et al. Structural basis of rotavirus RNA chaperone displacement and RNA annealing. <i>Proceedings of the National Academy of Sciences</i>. 2021;118(41). doi:<a href=\"https://doi.org/10.1073/pnas.2100198118\">10.1073/pnas.2100198118</a>","short":"J.P.K. Bravo, K. Bartnik, L. Venditti, J. Acker, E.H. Gail, A. Colyer, C. Davidovich, D.C. Lamb, R. Tuma, A.N. Calabrese, A. Borodavka, Proceedings of the National Academy of Sciences 118 (2021)."},"title":"Structural basis of rotavirus RNA chaperone displacement and RNA annealing","pmid":1,"external_id":{"pmid":["34615715"]},"publication_identifier":{"issn":["0027-8424"],"eissn":["1091-6490"]},"date_created":"2024-03-20T10:42:45Z","year":"2021","intvolume":"       118","issue":"41","article_type":"original","doi":"10.1073/pnas.2100198118","day":"06","abstract":[{"text":"Rotavirus genomes are distributed between 11 distinct RNA molecules, all of which must be selectively copackaged during virus assembly. This likely occurs through sequence-specific RNA interactions facilitated by the RNA chaperone NSP2. Here, we report that NSP2 autoregulates its chaperone activity through its C-terminal region (CTR) that promotes RNA–RNA interactions by limiting its helix-unwinding activity. Unexpectedly, structural proteomics data revealed that the CTR does not directly interact with RNA, while accelerating RNA release from NSP2. Cryo–electron microscopy reconstructions of an NSP2–RNA complex reveal a highly conserved acidic patch on the CTR, which is poised toward the bound RNA. Virus replication was abrogated by charge-disrupting mutations within the acidic patch but completely restored by charge-preserving mutations. Mechanistic similarities between NSP2 and the unrelated bacterial RNA chaperone Hfq suggest that accelerating RNA dissociation while promoting intermolecular RNA interactions may be a widespread strategy of RNA chaperone recycling.","lang":"eng"}],"author":[{"first_name":"Jack Peter Kelly","full_name":"Bravo, Jack Peter Kelly","orcid":"0000-0003-0456-0753","id":"96aecfa5-8931-11ee-af30-aa6a5d6eee0e","last_name":"Bravo"},{"first_name":"Kira","full_name":"Bartnik, Kira","last_name":"Bartnik"},{"first_name":"Luca","full_name":"Venditti, Luca","last_name":"Venditti"},{"last_name":"Acker","first_name":"Julia","full_name":"Acker, Julia"},{"first_name":"Emma H.","full_name":"Gail, Emma H.","last_name":"Gail"},{"last_name":"Colyer","full_name":"Colyer, Alice","first_name":"Alice"},{"last_name":"Davidovich","full_name":"Davidovich, Chen","first_name":"Chen"},{"first_name":"Don C.","full_name":"Lamb, Don C.","last_name":"Lamb"},{"first_name":"Roman","full_name":"Tuma, Roman","last_name":"Tuma"},{"last_name":"Calabrese","first_name":"Antonio N.","full_name":"Calabrese, Antonio N."},{"first_name":"Alexander","full_name":"Borodavka, Alexander","last_name":"Borodavka"}],"oa":1,"date_published":"2021-10-06T00:00:00Z"},{"pmid":1,"title":"Remdesivir is a delayed translocation inhibitor of SARS-CoV-2 replication","publication_identifier":{"issn":["1097-2765"]},"external_id":{"pmid":["33631104"]},"intvolume":"        81","year":"2021","date_created":"2024-03-20T10:42:53Z","publisher":"Elsevier","article_processing_charge":"No","citation":{"ista":"Bravo JPK, Dangerfield TL, Taylor DW, Johnson KA. 2021. Remdesivir is a delayed translocation inhibitor of SARS-CoV-2 replication. Molecular Cell. 81(7), 1548–1552.e4.","ieee":"J. P. K. Bravo, T. L. Dangerfield, D. W. Taylor, and K. A. Johnson, “Remdesivir is a delayed translocation inhibitor of SARS-CoV-2 replication,” <i>Molecular Cell</i>, vol. 81, no. 7. Elsevier, p. 1548–1552.e4, 2021.","apa":"Bravo, J. P. K., Dangerfield, T. L., Taylor, D. W., &#38; Johnson, K. A. (2021). Remdesivir is a delayed translocation inhibitor of SARS-CoV-2 replication. <i>Molecular Cell</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.molcel.2021.01.035\">https://doi.org/10.1016/j.molcel.2021.01.035</a>","chicago":"Bravo, Jack Peter Kelly, Tyler L. Dangerfield, David W. Taylor, and Kenneth A. Johnson. “Remdesivir Is a Delayed Translocation Inhibitor of SARS-CoV-2 Replication.” <i>Molecular Cell</i>. Elsevier, 2021. <a href=\"https://doi.org/10.1016/j.molcel.2021.01.035\">https://doi.org/10.1016/j.molcel.2021.01.035</a>.","short":"J.P.K. Bravo, T.L. Dangerfield, D.W. Taylor, K.A. Johnson, Molecular Cell 81 (2021) 1548–1552.e4.","mla":"Bravo, Jack Peter Kelly, et al. “Remdesivir Is a Delayed Translocation Inhibitor of SARS-CoV-2 Replication.” <i>Molecular Cell</i>, vol. 81, no. 7, Elsevier, 2021, p. 1548–1552.e4, doi:<a href=\"https://doi.org/10.1016/j.molcel.2021.01.035\">10.1016/j.molcel.2021.01.035</a>.","ama":"Bravo JPK, Dangerfield TL, Taylor DW, Johnson KA. Remdesivir is a delayed translocation inhibitor of SARS-CoV-2 replication. <i>Molecular Cell</i>. 2021;81(7):1548-1552.e4. doi:<a href=\"https://doi.org/10.1016/j.molcel.2021.01.035\">10.1016/j.molcel.2021.01.035</a>"},"extern":"1","day":"01","abstract":[{"text":"Remdesivir is a nucleoside analog approved by the US FDA for treatment of COVID-19. Here, we present a 3.9-Å-resolution cryo-EM reconstruction of a remdesivir-stalled RNA-dependent RNA polymerase complex, revealing full incorporation of 3 copies of remdesivir monophosphate (RMP) and a partially incorporated fourth RMP in the active site. The structure reveals that RMP blocks RNA translocation after incorporation of 3 bases following RMP, resulting in delayed chain termination, which can guide the rational design of improved antiviral drugs.","lang":"eng"}],"oa":1,"author":[{"full_name":"Bravo, Jack Peter Kelly","first_name":"Jack Peter Kelly","orcid":"0000-0003-0456-0753","id":"96aecfa5-8931-11ee-af30-aa6a5d6eee0e","last_name":"Bravo"},{"last_name":"Dangerfield","first_name":"Tyler L.","full_name":"Dangerfield, Tyler L."},{"last_name":"Taylor","first_name":"David W.","full_name":"Taylor, David W."},{"full_name":"Johnson, Kenneth A.","first_name":"Kenneth A.","last_name":"Johnson"}],"date_published":"2021-04-01T00:00:00Z","issue":"7","article_type":"original","doi":"10.1016/j.molcel.2021.01.035","main_file_link":[{"url":"https://doi.org/10.1101/2020.12.14.422718 ","open_access":"1"}],"date_updated":"2024-06-04T06:00:56Z","status":"public","publication_status":"published","month":"04","volume":81,"_id":"15140","oa_version":"Preprint","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","page":"1548-1552.e4","quality_controlled":"1","publication":"Molecular Cell","keyword":["Cell Biology","Molecular Biology"],"language":[{"iso":"eng"}],"type":"journal_article","scopus_import":"1"},{"language":[{"iso":"eng"}],"keyword":["Multidisciplinary"],"publication":"iScience","type":"journal_article","month":"03","publication_status":"published","volume":24,"main_file_link":[{"url":"https://doi.org/10.1016/j.isci.2021.102201","open_access":"1"}],"status":"public","date_updated":"2024-06-04T05:56:45Z","article_number":"102201","quality_controlled":"1","_id":"15141","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","author":[{"first_name":"Yi","full_name":"Zhou, Yi","last_name":"Zhou"},{"last_name":"Bravo","id":"96aecfa5-8931-11ee-af30-aa6a5d6eee0e","orcid":"0000-0003-0456-0753","first_name":"Jack Peter Kelly","full_name":"Bravo, Jack Peter Kelly"},{"last_name":"Taylor","first_name":"Hannah N.","full_name":"Taylor, Hannah N."},{"last_name":"Steens","first_name":"Jurre A.","full_name":"Steens, Jurre A."},{"last_name":"Jackson","first_name":"Ryan N.","full_name":"Jackson, Ryan N."},{"first_name":"Raymond H.J.","full_name":"Staals, Raymond H.J.","last_name":"Staals"},{"first_name":"David W.","full_name":"Taylor, David W.","last_name":"Taylor"}],"oa":1,"date_published":"2021-03-19T00:00:00Z","day":"19","abstract":[{"text":"We reveal the cryo-electron microscopy structure of a type IV-B CRISPR ribonucleoprotein (RNP) complex (Csf) at 3.9-Å resolution. The complex best resembles the type III-A CRISPR Csm effector complex, consisting of a Cas7-like (Csf2) filament intertwined with a small subunit (Cas11) filament, but the complex lacks subunits for RNA processing and target DNA cleavage. Surprisingly, instead of assembling around a CRISPR-derived RNA (crRNA), the complex assembles upon heterogeneous RNA of a regular length arranged in a pseudo-A-form configuration. These findings provide a high-resolution glimpse into the assembly and function of enigmatic type IV CRISPR systems, expanding our understanding of class I CRISPR-Cas system architecture, and suggesting a function for type IV-B RNPs that may be distinct from other class 1 CRISPR-associated systems.","lang":"eng"}],"doi":"10.1016/j.isci.2021.102201","issue":"3","article_type":"original","external_id":{"pmid":["33733066"]},"publication_identifier":{"issn":["2589-0042"]},"year":"2021","date_created":"2024-03-20T10:43:00Z","intvolume":"        24","pmid":1,"title":"Structure of a type IV CRISPR-Cas ribonucleoprotein complex","publisher":"Elsevier","article_processing_charge":"Yes (in subscription journal)","extern":"1","citation":{"ama":"Zhou Y, Bravo JPK, Taylor HN, et al. Structure of a type IV CRISPR-Cas ribonucleoprotein complex. <i>iScience</i>. 2021;24(3). doi:<a href=\"https://doi.org/10.1016/j.isci.2021.102201\">10.1016/j.isci.2021.102201</a>","mla":"Zhou, Yi, et al. “Structure of a Type IV CRISPR-Cas Ribonucleoprotein Complex.” <i>IScience</i>, vol. 24, no. 3, 102201, Elsevier, 2021, doi:<a href=\"https://doi.org/10.1016/j.isci.2021.102201\">10.1016/j.isci.2021.102201</a>.","short":"Y. Zhou, J.P.K. Bravo, H.N. Taylor, J.A. Steens, R.N. Jackson, R.H.J. Staals, D.W. Taylor, IScience 24 (2021).","chicago":"Zhou, Yi, Jack Peter Kelly Bravo, Hannah N. Taylor, Jurre A. Steens, Ryan N. Jackson, Raymond H.J. Staals, and David W. Taylor. “Structure of a Type IV CRISPR-Cas Ribonucleoprotein Complex.” <i>IScience</i>. Elsevier, 2021. <a href=\"https://doi.org/10.1016/j.isci.2021.102201\">https://doi.org/10.1016/j.isci.2021.102201</a>.","apa":"Zhou, Y., Bravo, J. P. K., Taylor, H. N., Steens, J. A., Jackson, R. N., Staals, R. H. J., &#38; Taylor, D. W. (2021). Structure of a type IV CRISPR-Cas ribonucleoprotein complex. <i>IScience</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.isci.2021.102201\">https://doi.org/10.1016/j.isci.2021.102201</a>","ieee":"Y. Zhou <i>et al.</i>, “Structure of a type IV CRISPR-Cas ribonucleoprotein complex,” <i>iScience</i>, vol. 24, no. 3. Elsevier, 2021.","ista":"Zhou Y, Bravo JPK, Taylor HN, Steens JA, Jackson RN, Staals RHJ, Taylor DW. 2021. Structure of a type IV CRISPR-Cas ribonucleoprotein complex. iScience. 24(3), 102201."}},{"intvolume":"       596","year":"2021","date_created":"2024-03-21T07:53:48Z","publication_status":"published","volume":596,"month":"08","publication_identifier":{"issn":["0028-0836"],"eissn":["1476-4687"]},"title":"BANP opens chromatin and activates CpG-island-regulated genes","status":"public","date_updated":"2024-03-25T12:34:31Z","citation":{"chicago":"Grand, Ralph S., Lukas Burger, Cathrin Gräwe, Alicia K. Michael, Luke Isbel, Daniel Hess, Leslie Hoerner, et al. “BANP Opens Chromatin and Activates CpG-Island-Regulated Genes.” <i>Nature</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1038/s41586-021-03689-8\">https://doi.org/10.1038/s41586-021-03689-8</a>.","apa":"Grand, R. S., Burger, L., Gräwe, C., Michael, A. K., Isbel, L., Hess, D., … Schübeler, D. (2021). BANP opens chromatin and activates CpG-island-regulated genes. <i>Nature</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41586-021-03689-8\">https://doi.org/10.1038/s41586-021-03689-8</a>","ieee":"R. S. Grand <i>et al.</i>, “BANP opens chromatin and activates CpG-island-regulated genes,” <i>Nature</i>, vol. 596. Springer Nature, pp. 133–137, 2021.","ista":"Grand RS, Burger L, Gräwe C, Michael AK, Isbel L, Hess D, Hoerner L, Iesmantavicius V, Durdu S, Pregnolato M, Krebs AR, Smallwood SA, Thomä N, Vermeulen M, Schübeler D. 2021. BANP opens chromatin and activates CpG-island-regulated genes. Nature. 596, 133–137.","ama":"Grand RS, Burger L, Gräwe C, et al. BANP opens chromatin and activates CpG-island-regulated genes. <i>Nature</i>. 2021;596:133-137. doi:<a href=\"https://doi.org/10.1038/s41586-021-03689-8\">10.1038/s41586-021-03689-8</a>","mla":"Grand, Ralph S., et al. “BANP Opens Chromatin and Activates CpG-Island-Regulated Genes.” <i>Nature</i>, vol. 596, Springer Nature, 2021, pp. 133–37, doi:<a href=\"https://doi.org/10.1038/s41586-021-03689-8\">10.1038/s41586-021-03689-8</a>.","short":"R.S. Grand, L. Burger, C. Gräwe, A.K. Michael, L. Isbel, D. Hess, L. Hoerner, V. Iesmantavicius, S. Durdu, M. Pregnolato, A.R. Krebs, S.A. Smallwood, N. Thomä, M. Vermeulen, D. Schübeler, Nature 596 (2021) 133–137."},"extern":"1","quality_controlled":"1","article_processing_charge":"No","publisher":"Springer Nature","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"15150","page":"133-137","oa_version":"None","date_published":"2021-08-05T00:00:00Z","author":[{"last_name":"Grand","full_name":"Grand, Ralph S.","first_name":"Ralph S."},{"last_name":"Burger","full_name":"Burger, Lukas","first_name":"Lukas"},{"last_name":"Gräwe","first_name":"Cathrin","full_name":"Gräwe, Cathrin"},{"last_name":"Michael","id":"6437c950-2a03-11ee-914d-d6476dd7b75c","orcid":"0000-0002-6080-839X","first_name":"Alicia","full_name":"Michael, Alicia"},{"first_name":"Luke","full_name":"Isbel, Luke","last_name":"Isbel"},{"last_name":"Hess","full_name":"Hess, Daniel","first_name":"Daniel"},{"first_name":"Leslie","full_name":"Hoerner, Leslie","last_name":"Hoerner"},{"last_name":"Iesmantavicius","first_name":"Vytautas","full_name":"Iesmantavicius, Vytautas"},{"last_name":"Durdu","full_name":"Durdu, Sevi","first_name":"Sevi"},{"last_name":"Pregnolato","first_name":"Marco","full_name":"Pregnolato, Marco"},{"last_name":"Krebs","first_name":"Arnaud R.","full_name":"Krebs, Arnaud R."},{"last_name":"Smallwood","first_name":"Sébastien A.","full_name":"Smallwood, Sébastien A."},{"first_name":"Nicolas","full_name":"Thomä, Nicolas","last_name":"Thomä"},{"first_name":"Michiel","full_name":"Vermeulen, Michiel","last_name":"Vermeulen"},{"last_name":"Schübeler","full_name":"Schübeler, Dirk","first_name":"Dirk"}],"language":[{"iso":"eng"}],"abstract":[{"text":"The majority of gene transcripts generated by RNA polymerase II in mammalian genomes initiate at CpG island (CGI) promoters1,2, yet our understanding of their regulation remains limited. This is in part due to the incomplete information that we have on transcription factors, their DNA-binding motifs and which genomic binding sites are functional in any given cell type3,4,5. In addition, there are orphan motifs without known binders, such as the CGCG element, which is associated with highly expressed genes across human tissues and enriched near the transcription start site of a subset of CGI promoters6,7,8. Here we combine single-molecule footprinting with interaction proteomics to identify BTG3-associated nuclear protein (BANP) as the transcription factor that binds this element in the mouse and human genome. We show that BANP is a strong CGI activator that controls essential metabolic genes in pluripotent stem and terminally differentiated neuronal cells. BANP binding is repelled by DNA methylation of its motif in vitro and in vivo, which epigenetically restricts most binding to CGIs and accounts for differential binding at aberrantly methylated CGI promoters in cancer cells. Upon binding to an unmethylated motif, BANP opens chromatin and phases nucleosomes. These findings establish BANP as a critical activator of a set of essential genes and suggest a model in which the activity of CGI promoters relies on methylation-sensitive transcription factors that are capable of chromatin opening.","lang":"eng"}],"publication":"Nature","day":"05","doi":"10.1038/s41586-021-03689-8","scopus_import":"1","article_type":"original","type":"journal_article"},{"type":"journal_article","scopus_import":"1","publication":"Cell","keyword":["General Biochemistry","Genetics and Molecular Biology"],"language":[{"iso":"eng"}],"_id":"15151","oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","page":"3599-3611","quality_controlled":"1","main_file_link":[{"url":"https://doi.org/10.1016/j.cell.2021.05.029","open_access":"1"}],"status":"public","date_updated":"2024-03-25T12:31:39Z","volume":184,"month":"07","publication_status":"published","issue":"14","article_type":"review","doi":"10.1016/j.cell.2021.05.029","day":"08","abstract":[{"text":"Eukaryotic DNA-binding proteins operate in the context of chromatin, where nucleosomes are the elementary building blocks. Nucleosomal DNA is wrapped around a histone core, thereby rendering a large fraction of the DNA surface inaccessible to DNA-binding proteins. Nevertheless, first responders in DNA repair and sequence-specific transcription factors bind DNA target sites obstructed by chromatin. While early studies examined protein binding to histone-free DNA, it is only now beginning to emerge how DNA sequences are interrogated on nucleosomes. These readout strategies range from the release of nucleosomal DNA from histones, to rotational/translation register shifts of the DNA motif, and nucleosome-specific DNA binding modes that differ from those observed on naked DNA. Since DNA motif engagement on nucleosomes strongly depends on position and orientation, we argue that motif location and nucleosome positioning co-determine protein access to DNA in transcription and DNA repair.","lang":"eng"}],"author":[{"full_name":"Michael, Alicia","first_name":"Alicia","orcid":"0000-0002-6080-839X","id":"6437c950-2a03-11ee-914d-d6476dd7b75c","last_name":"Michael"},{"first_name":"Nicolas H.","full_name":"Thomä, Nicolas H.","last_name":"Thomä"}],"oa":1,"date_published":"2021-07-08T00:00:00Z","publisher":"Elsevier","article_processing_charge":"No","citation":{"mla":"Michael, Alicia K., and Nicolas H. Thomä. “Reading the Chromatinized Genome.” <i>Cell</i>, vol. 184, no. 14, Elsevier, 2021, pp. 3599–611, doi:<a href=\"https://doi.org/10.1016/j.cell.2021.05.029\">10.1016/j.cell.2021.05.029</a>.","ama":"Michael AK, Thomä NH. Reading the chromatinized genome. <i>Cell</i>. 2021;184(14):3599-3611. doi:<a href=\"https://doi.org/10.1016/j.cell.2021.05.029\">10.1016/j.cell.2021.05.029</a>","short":"A.K. Michael, N.H. Thomä, Cell 184 (2021) 3599–3611.","chicago":"Michael, Alicia K., and Nicolas H. Thomä. “Reading the Chromatinized Genome.” <i>Cell</i>. Elsevier, 2021. <a href=\"https://doi.org/10.1016/j.cell.2021.05.029\">https://doi.org/10.1016/j.cell.2021.05.029</a>.","apa":"Michael, A. K., &#38; Thomä, N. H. (2021). Reading the chromatinized genome. <i>Cell</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.cell.2021.05.029\">https://doi.org/10.1016/j.cell.2021.05.029</a>","ista":"Michael AK, Thomä NH. 2021. Reading the chromatinized genome. Cell. 184(14), 3599–3611.","ieee":"A. K. Michael and N. H. Thomä, “Reading the chromatinized genome,” <i>Cell</i>, vol. 184, no. 14. Elsevier, pp. 3599–3611, 2021."},"extern":"1","title":"Reading the chromatinized genome","publication_identifier":{"issn":["0092-8674"]},"year":"2021","date_created":"2024-03-21T07:54:19Z","intvolume":"       184"},{"quality_controlled":"1","article_number":"120","_id":"15215","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Preprint","month":"10","publication_status":"published","volume":920,"date_updated":"2024-04-02T07:28:22Z","status":"public","main_file_link":[{"url":"https://arxiv.org/abs/2012.00169","open_access":"1"}],"scopus_import":"1","type":"journal_article","language":[{"iso":"eng"}],"publication":"The Astrophysical Journal","keyword":["Space and Planetary Science","Astronomy and Astrophysics"],"extern":"1","citation":{"short":"Y. Yao, S.R. Kulkarni, K.B. Burdge, I. Caiazzo, K. De, D. Dong, C. Fremling, M.M. Kasliwal, T. Kupfer, J. van Roestel, J. Sollerman, A. Bagdasaryan, E.C. Bellm, S.B. Cenko, A.J. Drake, D.A. Duev, M.J. Graham, S. Kaye, F.J. Masci, N. Miranda, T.A. Prince, R. Riddle, B. Rusholme, M.T. Soumagnac, The Astrophysical Journal 920 (2021).","mla":"Yao, Yuhan, et al. “Multi-Wavelength Observations of AT2019wey: A New Candidate Black Hole Low-Mass X-Ray Binary.” <i>The Astrophysical Journal</i>, vol. 920, no. 2, 120, American Astronomical Society, 2021, doi:<a href=\"https://doi.org/10.3847/1538-4357/ac15f9\">10.3847/1538-4357/ac15f9</a>.","ama":"Yao Y, Kulkarni SR, Burdge KB, et al. Multi-wavelength observations of AT2019wey: A new candidate black hole low-mass X-ray binary. <i>The Astrophysical Journal</i>. 2021;920(2). doi:<a href=\"https://doi.org/10.3847/1538-4357/ac15f9\">10.3847/1538-4357/ac15f9</a>","ista":"Yao Y, Kulkarni SR, Burdge KB, Caiazzo I, De K, Dong D, Fremling C, Kasliwal MM, Kupfer T, van Roestel J, Sollerman J, Bagdasaryan A, Bellm EC, Cenko SB, Drake AJ, Duev DA, Graham MJ, Kaye S, Masci FJ, Miranda N, Prince TA, Riddle R, Rusholme B, Soumagnac MT. 2021. Multi-wavelength observations of AT2019wey: A new candidate black hole low-mass X-ray binary. The Astrophysical Journal. 920(2), 120.","ieee":"Y. Yao <i>et al.</i>, “Multi-wavelength observations of AT2019wey: A new candidate black hole low-mass X-ray binary,” <i>The Astrophysical Journal</i>, vol. 920, no. 2. American Astronomical Society, 2021.","chicago":"Yao, Yuhan, S. R. Kulkarni, Kevin B. Burdge, Ilaria Caiazzo, Kishalay De, Dillon Dong, C. Fremling, et al. “Multi-Wavelength Observations of AT2019wey: A New Candidate Black Hole Low-Mass X-Ray Binary.” <i>The Astrophysical Journal</i>. American Astronomical Society, 2021. <a href=\"https://doi.org/10.3847/1538-4357/ac15f9\">https://doi.org/10.3847/1538-4357/ac15f9</a>.","apa":"Yao, Y., Kulkarni, S. R., Burdge, K. B., Caiazzo, I., De, K., Dong, D., … Soumagnac, M. T. (2021). Multi-wavelength observations of AT2019wey: A new candidate black hole low-mass X-ray binary. <i>The Astrophysical Journal</i>. American Astronomical Society. <a href=\"https://doi.org/10.3847/1538-4357/ac15f9\">https://doi.org/10.3847/1538-4357/ac15f9</a>"},"publisher":"American Astronomical Society","article_processing_charge":"No","intvolume":"       920","year":"2021","date_created":"2024-03-26T10:32:06Z","publication_identifier":{"eissn":["1538-4357"],"issn":["0004-637X"]},"external_id":{"arxiv":["2012.00169"]},"title":"Multi-wavelength observations of AT2019wey: A new candidate black hole low-mass X-ray binary","doi":"10.3847/1538-4357/ac15f9","article_type":"original","issue":"2","date_published":"2021-10-21T00:00:00Z","oa":1,"author":[{"first_name":"Yuhan","full_name":"Yao, Yuhan","last_name":"Yao"},{"first_name":"S. R.","full_name":"Kulkarni, S. R.","last_name":"Kulkarni"},{"first_name":"Kevin B.","full_name":"Burdge, Kevin B.","last_name":"Burdge"},{"id":"8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d","last_name":"Caiazzo","first_name":"Ilaria","full_name":"Caiazzo, Ilaria","orcid":"0000-0002-4770-5388"},{"first_name":"Kishalay","full_name":"De, Kishalay","last_name":"De"},{"last_name":"Dong","first_name":"Dillon","full_name":"Dong, Dillon"},{"last_name":"Fremling","first_name":"C.","full_name":"Fremling, C."},{"last_name":"Kasliwal","first_name":"Mansi M.","full_name":"Kasliwal, Mansi M."},{"last_name":"Kupfer","first_name":"Thomas","full_name":"Kupfer, Thomas"},{"first_name":"Jan","full_name":"van Roestel, Jan","last_name":"van Roestel"},{"first_name":"Jesper","full_name":"Sollerman, Jesper","last_name":"Sollerman"},{"last_name":"Bagdasaryan","full_name":"Bagdasaryan, Ashot","first_name":"Ashot"},{"first_name":"Eric C.","full_name":"Bellm, Eric C.","last_name":"Bellm"},{"full_name":"Cenko, S. Bradley","first_name":"S. Bradley","last_name":"Cenko"},{"last_name":"Drake","full_name":"Drake, Andrew J.","first_name":"Andrew J."},{"full_name":"Duev, Dmitry A.","first_name":"Dmitry A.","last_name":"Duev"},{"full_name":"Graham, Matthew J.","first_name":"Matthew J.","last_name":"Graham"},{"last_name":"Kaye","full_name":"Kaye, Stephen","first_name":"Stephen"},{"first_name":"Frank J.","full_name":"Masci, Frank J.","last_name":"Masci"},{"last_name":"Miranda","first_name":"Nicolas","full_name":"Miranda, Nicolas"},{"full_name":"Prince, Thomas A.","first_name":"Thomas A.","last_name":"Prince"},{"full_name":"Riddle, Reed","first_name":"Reed","last_name":"Riddle"},{"last_name":"Rusholme","full_name":"Rusholme, Ben","first_name":"Ben"},{"last_name":"Soumagnac","first_name":"Maayane T.","full_name":"Soumagnac, Maayane T."}],"arxiv":1,"abstract":[{"lang":"eng","text":"AT2019wey (SRGA J043520.9+552226, SRGE J043523.3+552234) is a transient first reported by the ATLAS optical survey in 2019 December. It rose to prominence upon detection, three months later, by the Spektrum-Roentgen-Gamma (SRG) mission in its first all-sky survey. X-ray observations reported in Yao et al. suggest that AT2019wey is a Galactic low-mass X-ray binary (LMXB) with a black hole (BH) or neutron star (NS) accretor. Here we present ultraviolet, optical, near-infrared, and radio observations of this object. We show that the companion is a short-period (P ≲ 16 hr) low-mass (<1 M⊙) star. We consider AT2019wey to be a candidate BH system since its locations on the Lradio–LX and Lopt–LX diagrams are closer to BH binaries than NS binaries. We demonstrate that from 2020 June to August, despite the more than 10 times brightening at radio and X-ray wavelengths, the optical luminosity of AT2019wey only increased by 1.3–1.4 times. We interpret the UV/optical emission before the brightening as thermal emission from a truncated disk in a hot accretion flow and the UV/optical emission after the brightening as reprocessing of the X-ray emission in the outer accretion disk. AT2019wey demonstrates that combining current wide-field optical surveys and SRG provides a way to discover the emerging population of short-period BH LMXB systems with faint X-ray outbursts."}],"day":"21"},{"publication":"The Astronomical Journal","keyword":["Space and Planetary Science","Astronomy and Astrophysics"],"language":[{"iso":"eng"}],"type":"journal_article","scopus_import":"1","date_updated":"2024-04-02T07:28:50Z","status":"public","main_file_link":[{"url":"https://arxiv.org/abs/2105.02261","open_access":"1"}],"month":"08","volume":162,"publication_status":"published","_id":"15216","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Preprint","article_number":"113","quality_controlled":"1","abstract":[{"lang":"eng","text":"AM CVn systems are a rare type of accreting binary that consists of a white dwarf and a helium-rich, degenerate donor star. Using the Zwicky Transient Facility (ZTF), we searched for new AM CVn systems by focusing on blue, outbursting stars. We first selected outbursting stars using the ZTF alerts. We cross matched the candidates with Gaia and Pan-STARRS catalogs. The initial selection of candidates based on the Gaia BP-RP contains 1751 unknown objects. We used the Pan-STARRS g-r and r-i color in combination with the Gaia color to identify 59 strong AM CVn candidates. We obtained identification spectra of 35 sources, of which 18 are high-priority candidates, and discovered nine new AM CVn systems and one magnetic CV that shows only He-ii lines. Using the outburst recurrence time, we estimate the orbital periods of the nine new AM CVn systems that are in the range of 29–50 minutes. We conclude that targeted follow up of blue, outbursting sources is an efficient method to find new AM CVn systems and we plan to follow up all candidates we identified to systematically study the population of outbursting AM CVn systems."}],"day":"19","date_published":"2021-08-19T00:00:00Z","author":[{"first_name":"Jan","full_name":"van Roestel, Jan","last_name":"van Roestel"},{"full_name":"Creter, Leah","first_name":"Leah","last_name":"Creter"},{"full_name":"Kupfer, Thomas","first_name":"Thomas","last_name":"Kupfer"},{"last_name":"Szkody","first_name":"Paula","full_name":"Szkody, Paula"},{"first_name":"Jim","full_name":"Fuller, Jim","last_name":"Fuller"},{"first_name":"Matthew J.","full_name":"Green, Matthew J.","last_name":"Green"},{"first_name":"R. Michael","full_name":"Rich, R. Michael","last_name":"Rich"},{"first_name":"John","full_name":"Sepikas, John","last_name":"Sepikas"},{"last_name":"Burdge","full_name":"Burdge, Kevin","first_name":"Kevin"},{"orcid":"0000-0002-4770-5388","first_name":"Ilaria","full_name":"Caiazzo, Ilaria","last_name":"Caiazzo","id":"8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d"},{"last_name":"Mróz","first_name":"Przemek","full_name":"Mróz, Przemek"},{"first_name":"Thomas A.","full_name":"Prince, Thomas A.","last_name":"Prince"},{"full_name":"Duev, Dmitry A.","first_name":"Dmitry A.","last_name":"Duev"},{"first_name":"Matthew J.","full_name":"Graham, Matthew J.","last_name":"Graham"},{"first_name":"David L.","full_name":"Shupe, David L.","last_name":"Shupe"},{"last_name":"Laher","full_name":"Laher, Russ R.","first_name":"Russ R."},{"last_name":"Mahabal","full_name":"Mahabal, Ashish A.","first_name":"Ashish A."},{"last_name":"Masci","full_name":"Masci, Frank J.","first_name":"Frank J."}],"arxiv":1,"oa":1,"article_type":"original","issue":"3","doi":"10.3847/1538-3881/ac0622","title":"A systematic search for outbursting AM CVn systems with the Zwicky transient facility","year":"2021","date_created":"2024-03-26T10:32:25Z","intvolume":"       162","external_id":{"arxiv":["2105.02261"]},"publication_identifier":{"issn":["0004-6256"],"eissn":["1538-3881"]},"extern":"1","citation":{"chicago":"Roestel, Jan van, Leah Creter, Thomas Kupfer, Paula Szkody, Jim Fuller, Matthew J. Green, R. Michael Rich, et al. “A Systematic Search for Outbursting AM CVn Systems with the Zwicky Transient Facility.” <i>The Astronomical Journal</i>. American Astronomical Society, 2021. <a href=\"https://doi.org/10.3847/1538-3881/ac0622\">https://doi.org/10.3847/1538-3881/ac0622</a>.","apa":"van Roestel, J., Creter, L., Kupfer, T., Szkody, P., Fuller, J., Green, M. J., … Masci, F. J. (2021). A systematic search for outbursting AM CVn systems with the Zwicky transient facility. <i>The Astronomical Journal</i>. American Astronomical Society. <a href=\"https://doi.org/10.3847/1538-3881/ac0622\">https://doi.org/10.3847/1538-3881/ac0622</a>","ieee":"J. van Roestel <i>et al.</i>, “A systematic search for outbursting AM CVn systems with the Zwicky transient facility,” <i>The Astronomical Journal</i>, vol. 162, no. 3. American Astronomical Society, 2021.","ista":"van Roestel J, Creter L, Kupfer T, Szkody P, Fuller J, Green MJ, Rich RM, Sepikas J, Burdge K, Caiazzo I, Mróz P, Prince TA, Duev DA, Graham MJ, Shupe DL, Laher RR, Mahabal AA, Masci FJ. 2021. A systematic search for outbursting AM CVn systems with the Zwicky transient facility. The Astronomical Journal. 162(3), 113.","ama":"van Roestel J, Creter L, Kupfer T, et al. A systematic search for outbursting AM CVn systems with the Zwicky transient facility. <i>The Astronomical Journal</i>. 2021;162(3). doi:<a href=\"https://doi.org/10.3847/1538-3881/ac0622\">10.3847/1538-3881/ac0622</a>","mla":"van Roestel, Jan, et al. “A Systematic Search for Outbursting AM CVn Systems with the Zwicky Transient Facility.” <i>The Astronomical Journal</i>, vol. 162, no. 3, 113, American Astronomical Society, 2021, doi:<a href=\"https://doi.org/10.3847/1538-3881/ac0622\">10.3847/1538-3881/ac0622</a>.","short":"J. van Roestel, L. Creter, T. Kupfer, P. Szkody, J. Fuller, M.J. Green, R.M. Rich, J. Sepikas, K. Burdge, I. Caiazzo, P. Mróz, T.A. Prince, D.A. Duev, M.J. Graham, D.L. Shupe, R.R. Laher, A.A. Mahabal, F.J. Masci, The Astronomical Journal 162 (2021)."},"publisher":"American Astronomical Society","article_processing_charge":"No"},{"day":"30","abstract":[{"text":"White dwarfs represent the last stage of evolution of stars with mass less than about eight times that of the Sun and, like other stars, are often found in binaries1,2. If the orbital period of the binary is short enough, energy losses from gravitational-wave radiation can shrink the orbit until the two white dwarfs come into contact and merge3. Depending on the component masses, the merger can lead to a supernova of type Ia or result in a massive white dwarf4. In the latter case, the white dwarf remnant is expected to be highly magnetized5,6 because of the strong magnetic dynamo that should arise during the merger, and be rapidly spinning from the conservation of the orbital angular momentum7. Here we report observations of a white dwarf, ZTF J190132.9+145808.7, that exhibits these properties, but to an extreme: a rotation period of 6.94 minutes, a magnetic field ranging between 600 megagauss and 900 megagauss over its surface, and a stellar radius of \r\n kilometres, only slightly larger than the radius of the Moon. Such a small radius implies that the star’s mass is close to the maximum white dwarf mass, or Chandrasekhar mass. ZTF J190132.9+145808.7 is likely to be cooling through the Urca processes (neutrino emission from electron capture on sodium) because of the high densities reached in its core.","lang":"eng"}],"oa":1,"arxiv":1,"author":[{"first_name":"Ilaria","full_name":"Caiazzo, Ilaria","orcid":"0000-0002-4770-5388","id":"8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d","last_name":"Caiazzo"},{"first_name":"Kevin B.","full_name":"Burdge, Kevin B.","last_name":"Burdge"},{"first_name":"James","full_name":"Fuller, James","last_name":"Fuller"},{"last_name":"Heyl","first_name":"Jeremy","full_name":"Heyl, Jeremy"},{"full_name":"Kulkarni, S. R.","first_name":"S. R.","last_name":"Kulkarni"},{"last_name":"Prince","full_name":"Prince, Thomas A.","first_name":"Thomas A."},{"last_name":"Richer","first_name":"Harvey B.","full_name":"Richer, Harvey B."},{"first_name":"Josiah","full_name":"Schwab, Josiah","last_name":"Schwab"},{"first_name":"Igor","full_name":"Andreoni, Igor","last_name":"Andreoni"},{"last_name":"Bellm","full_name":"Bellm, Eric C.","first_name":"Eric C."},{"last_name":"Drake","first_name":"Andrew","full_name":"Drake, Andrew"},{"full_name":"Duev, Dmitry A.","first_name":"Dmitry A.","last_name":"Duev"},{"last_name":"Graham","first_name":"Matthew J.","full_name":"Graham, Matthew J."},{"first_name":"George","full_name":"Helou, George","last_name":"Helou"},{"first_name":"Ashish A.","full_name":"Mahabal, Ashish A.","last_name":"Mahabal"},{"full_name":"Masci, Frank J.","first_name":"Frank J.","last_name":"Masci"},{"last_name":"Smith","full_name":"Smith, Roger","first_name":"Roger"},{"full_name":"Soumagnac, Maayane T.","first_name":"Maayane T.","last_name":"Soumagnac"}],"date_published":"2021-06-30T00:00:00Z","issue":"7865","article_type":"original","doi":"10.1038/s41586-021-03615-y","title":"A highly magnetized and rapidly rotating white dwarf as small as the Moon","publication_identifier":{"eissn":["1476-4687"],"issn":["0028-0836"]},"external_id":{"arxiv":["2107.08458"]},"intvolume":"       595","year":"2021","date_created":"2024-03-26T10:33:03Z","article_processing_charge":"No","publisher":"Springer Nature","citation":{"ieee":"I. Caiazzo <i>et al.</i>, “A highly magnetized and rapidly rotating white dwarf as small as the Moon,” <i>Nature</i>, vol. 595, no. 7865. Springer Nature, pp. 39–42, 2021.","ista":"Caiazzo I, Burdge KB, Fuller J, Heyl J, Kulkarni SR, Prince TA, Richer HB, Schwab J, Andreoni I, Bellm EC, Drake A, Duev DA, Graham MJ, Helou G, Mahabal AA, Masci FJ, Smith R, Soumagnac MT. 2021. A highly magnetized and rapidly rotating white dwarf as small as the Moon. Nature. 595(7865), 39–42.","apa":"Caiazzo, I., Burdge, K. B., Fuller, J., Heyl, J., Kulkarni, S. R., Prince, T. A., … Soumagnac, M. T. (2021). A highly magnetized and rapidly rotating white dwarf as small as the Moon. <i>Nature</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41586-021-03615-y\">https://doi.org/10.1038/s41586-021-03615-y</a>","chicago":"Caiazzo, Ilaria, Kevin B. Burdge, James Fuller, Jeremy Heyl, S. R. Kulkarni, Thomas A. Prince, Harvey B. Richer, et al. “A Highly Magnetized and Rapidly Rotating White Dwarf as Small as the Moon.” <i>Nature</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1038/s41586-021-03615-y\">https://doi.org/10.1038/s41586-021-03615-y</a>.","short":"I. Caiazzo, K.B. Burdge, J. Fuller, J. Heyl, S.R. Kulkarni, T.A. Prince, H.B. Richer, J. Schwab, I. Andreoni, E.C. Bellm, A. Drake, D.A. Duev, M.J. Graham, G. Helou, A.A. Mahabal, F.J. Masci, R. Smith, M.T. Soumagnac, Nature 595 (2021) 39–42.","mla":"Caiazzo, Ilaria, et al. “A Highly Magnetized and Rapidly Rotating White Dwarf as Small as the Moon.” <i>Nature</i>, vol. 595, no. 7865, Springer Nature, 2021, pp. 39–42, doi:<a href=\"https://doi.org/10.1038/s41586-021-03615-y\">10.1038/s41586-021-03615-y</a>.","ama":"Caiazzo I, Burdge KB, Fuller J, et al. A highly magnetized and rapidly rotating white dwarf as small as the Moon. <i>Nature</i>. 2021;595(7865):39-42. doi:<a href=\"https://doi.org/10.1038/s41586-021-03615-y\">10.1038/s41586-021-03615-y</a>"},"extern":"1","publication":"Nature","language":[{"iso":"eng"}],"type":"journal_article","scopus_import":"1","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2107.08458"}],"date_updated":"2024-10-14T12:33:57Z","status":"public","month":"06","publication_status":"published","volume":595,"oa_version":"Preprint","_id":"15218","page":"39-42","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","related_material":{"link":[{"url":"https://doi.org/10.1038/s41586-021-03799-3","relation":"erratum"}]},"quality_controlled":"1"},{"language":[{"iso":"eng"}],"publication":"The Astrophysical Journal","keyword":["Space and Planetary Science","Astronomy and Astrophysics"],"scopus_import":"1","type":"journal_article","month":"05","volume":912,"publication_status":"published","date_updated":"2024-04-03T14:11:17Z","status":"public","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2101.08300","open_access":"1"}],"article_number":"165","quality_controlled":"1","oa_version":"Preprint","_id":"15219","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2021-05-17T00:00:00Z","author":[{"full_name":"Richer, Harvey B.","first_name":"Harvey B.","last_name":"Richer"},{"orcid":"0000-0002-4770-5388","full_name":"Caiazzo, Ilaria","first_name":"Ilaria","last_name":"Caiazzo","id":"8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d"},{"last_name":"Du","full_name":"Du, Helen","first_name":"Helen"},{"last_name":"Grondin","full_name":"Grondin, Steffani","first_name":"Steffani"},{"last_name":"Hegarty","full_name":"Hegarty, James","first_name":"James"},{"last_name":"Heyl","full_name":"Heyl, Jeremy","first_name":"Jeremy"},{"full_name":"Kerr, Ronan","first_name":"Ronan","last_name":"Kerr"},{"last_name":"Miller","first_name":"David R.","full_name":"Miller, David R."},{"last_name":"Thiele","first_name":"Sarah","full_name":"Thiele, Sarah"}],"arxiv":1,"oa":1,"abstract":[{"text":"We have carried out a search for massive white dwarfs (WDs) in the direction of young open star clusters using the Gaia DR2 database. The aim of this survey was (1) to provide robust data for new and previously known high-mass WDs regarding cluster membership, (2) to highlight WDs previously included in the initial final mass relation (IFMR) that are unlikely members of their respective clusters according to Gaia astrometry, and (3) to select an unequivocal WD sample that could then be compared with the host clusters' turnoff masses. All promising WD candidates in each cluster color–magnitude diagram were followed up with spectroscopy from Gemini in order to determine whether they were indeed WDs and derive their masses, temperatures, and ages. In order to be considered cluster members, white dwarfs were required to (1) have proper motions and parallaxes within 2σ, 3σ, or 4σ of those of their potential parent cluster based on how contaminated the field was in their region of the sky, (2) have a cooling age that was less than the cluster age, and (3) have a mass that was broadly consistent with the IFMR. A number of WDs included in current versions of the IFMR turned out to be nonmembers, and a number of apparent members, based on Gaia's astrometric data alone, were rejected, as their mass and/or cooling times were incompatible with cluster membership. In this way, we developed a highly selected IFMR sample for high-mass WDs that, surprisingly, contained no precursor masses significantly in excess of ∼ 6 M⊙.","lang":"eng"}],"day":"17","doi":"10.3847/1538-4357/abdeb7","article_type":"original","issue":"2","year":"2021","date_created":"2024-03-26T10:33:23Z","intvolume":"       912","external_id":{"arxiv":["2101.08300"]},"publication_identifier":{"eissn":["1538-4357"],"issn":["0004-637X"]},"title":"Massive white dwarfs in young star clusters","citation":{"chicago":"Richer, Harvey B., Ilaria Caiazzo, Helen Du, Steffani Grondin, James Hegarty, Jeremy Heyl, Ronan Kerr, David R. Miller, and Sarah Thiele. “Massive White Dwarfs in Young Star Clusters.” <i>The Astrophysical Journal</i>. American Astronomical Society, 2021. <a href=\"https://doi.org/10.3847/1538-4357/abdeb7\">https://doi.org/10.3847/1538-4357/abdeb7</a>.","apa":"Richer, H. B., Caiazzo, I., Du, H., Grondin, S., Hegarty, J., Heyl, J., … Thiele, S. (2021). Massive white dwarfs in young star clusters. <i>The Astrophysical Journal</i>. American Astronomical Society. <a href=\"https://doi.org/10.3847/1538-4357/abdeb7\">https://doi.org/10.3847/1538-4357/abdeb7</a>","ista":"Richer HB, Caiazzo I, Du H, Grondin S, Hegarty J, Heyl J, Kerr R, Miller DR, Thiele S. 2021. Massive white dwarfs in young star clusters. The Astrophysical Journal. 912(2), 165.","ieee":"H. B. Richer <i>et al.</i>, “Massive white dwarfs in young star clusters,” <i>The Astrophysical Journal</i>, vol. 912, no. 2. American Astronomical Society, 2021.","ama":"Richer HB, Caiazzo I, Du H, et al. Massive white dwarfs in young star clusters. <i>The Astrophysical Journal</i>. 2021;912(2). doi:<a href=\"https://doi.org/10.3847/1538-4357/abdeb7\">10.3847/1538-4357/abdeb7</a>","mla":"Richer, Harvey B., et al. “Massive White Dwarfs in Young Star Clusters.” <i>The Astrophysical Journal</i>, vol. 912, no. 2, 165, American Astronomical Society, 2021, doi:<a href=\"https://doi.org/10.3847/1538-4357/abdeb7\">10.3847/1538-4357/abdeb7</a>.","short":"H.B. Richer, I. Caiazzo, H. Du, S. Grondin, J. Hegarty, J. Heyl, R. Kerr, D.R. Miller, S. Thiele, The Astrophysical Journal 912 (2021)."},"extern":"1","article_processing_charge":"No","publisher":"American Astronomical Society"},{"abstract":[{"lang":"eng","text":"We describe an implementation of a broad-band soft X-ray polarimeter, substantially based on previous designs. The Globe-Orbiting Soft X-ray Polarimeter (GOSoX) is a SmallSat. As in a related mission concept the PiSoX Polarimeter, the grating arrangement is designed optimally for the purpose of polarimetry matching the dispersion of a spectrometer to a laterally graded multilayer (LGML). For GOSoX, the optics are lightweight Si mirrors in a one-bounce parabolic configuration. The instrument covers the wavelength range from 31 A to 75 A (165 - 400 eV). Upon satellite rotation, the intensities of the dispersed spectra, after reflection and polarizing by the LGMLs, give the three Stokes parameters needed to determine a source's linear polarization fraction and orientation. The design can be extended to higher energies as LGMLs are developed further. We describe the potential scientific return and the proposed mission concept following the results of a JPL Team X concept study."}],"publication":"Optics for EUV, X-Ray, and Gamma-Ray Astronomy X","conference":{"location":"San Diego, CA, United States","start_date":"2021-08-01","end_date":"2021-08-05","name":"Optical Engineering + Applications"},"day":"21","date_published":"2021-08-21T00:00:00Z","language":[{"iso":"eng"}],"author":[{"last_name":"Marshall","first_name":"Herman L.","full_name":"Marshall, Herman L."},{"full_name":"Heine, Sarah","first_name":"Sarah","last_name":"Heine"},{"last_name":"Davidson","first_name":"Rosemary","full_name":"Davidson, Rosemary"},{"full_name":"Garner, Alan","first_name":"Alan","last_name":"Garner"},{"full_name":"Gullikson, Eric","first_name":"Eric","last_name":"Gullikson"},{"full_name":"Günther, Moritz","first_name":"Moritz","last_name":"Günther"},{"first_name":"Christopher","full_name":"Leitz, Christopher","last_name":"Leitz"},{"full_name":"Masterson, Rebecca","first_name":"Rebecca","last_name":"Masterson"},{"last_name":"Miller","full_name":"Miller, Eric","first_name":"Eric"},{"full_name":"Stenzel, June S.","first_name":"June S.","last_name":"Stenzel"},{"last_name":"Zhang","first_name":"William W.","full_name":"Zhang, William W."},{"first_name":"Rozenn","full_name":"Boissay-Malaquin, Rozenn","last_name":"Boissay-Malaquin"},{"full_name":"Caiazzo, Ilaria","first_name":"Ilaria","orcid":"0000-0002-4770-5388","id":"8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d","last_name":"Caiazzo"},{"last_name":"Chakrabarty","first_name":"Deepto","full_name":"Chakrabarty, Deepto"},{"last_name":"Gallo","first_name":"Luigi","full_name":"Gallo, Luigi"},{"last_name":"Heilmann","first_name":"Ralf","full_name":"Heilmann, Ralf"},{"last_name":"Heyl","full_name":"Heyl, Jeremy","first_name":"Jeremy"},{"first_name":"Erin","full_name":"Kara, Erin","last_name":"Kara"},{"first_name":"Norbert","full_name":"Schulz, Norbert","last_name":"Schulz"}],"type":"conference","doi":"10.1117/12.2596186","scopus_import":"1","status":"public","date_updated":"2024-04-03T14:13:09Z","title":"The Globe Orbiting Soft X-ray (GOSoX) polarimeter concept study","year":"2021","date_created":"2024-03-26T10:34:21Z","intvolume":"     11822","volume":11822,"publication_status":"published","month":"08","oa_version":"None","_id":"15222","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"short":"H.L. Marshall, S. Heine, R. Davidson, A. Garner, E. Gullikson, M. Günther, C. Leitz, R. Masterson, E. Miller, J.S. Stenzel, W.W. Zhang, R. Boissay-Malaquin, I. Caiazzo, D. Chakrabarty, L. Gallo, R. Heilmann, J. Heyl, E. Kara, N. Schulz, in:, Optics for EUV, X-Ray, and Gamma-Ray Astronomy X, SPIE, 2021.","ama":"Marshall HL, Heine S, Davidson R, et al. The Globe Orbiting Soft X-ray (GOSoX) polarimeter concept study. In: <i>Optics for EUV, X-Ray, and Gamma-Ray Astronomy X</i>. Vol 11822. SPIE; 2021. doi:<a href=\"https://doi.org/10.1117/12.2596186\">10.1117/12.2596186</a>","mla":"Marshall, Herman L., et al. “The Globe Orbiting Soft X-Ray (GOSoX) Polarimeter Concept Study.” <i>Optics for EUV, X-Ray, and Gamma-Ray Astronomy X</i>, vol. 11822, SPIE, 2021, doi:<a href=\"https://doi.org/10.1117/12.2596186\">10.1117/12.2596186</a>.","ista":"Marshall HL, Heine S, Davidson R, Garner A, Gullikson E, Günther M, Leitz C, Masterson R, Miller E, Stenzel JS, Zhang WW, Boissay-Malaquin R, Caiazzo I, Chakrabarty D, Gallo L, Heilmann R, Heyl J, Kara E, Schulz N. 2021. The Globe Orbiting Soft X-ray (GOSoX) polarimeter concept study. Optics for EUV, X-Ray, and Gamma-Ray Astronomy X. Optical Engineering + Applications vol. 11822.","ieee":"H. L. Marshall <i>et al.</i>, “The Globe Orbiting Soft X-ray (GOSoX) polarimeter concept study,” in <i>Optics for EUV, X-Ray, and Gamma-Ray Astronomy X</i>, San Diego, CA, United States, 2021, vol. 11822.","chicago":"Marshall, Herman L., Sarah Heine, Rosemary Davidson, Alan Garner, Eric Gullikson, Moritz Günther, Christopher Leitz, et al. “The Globe Orbiting Soft X-Ray (GOSoX) Polarimeter Concept Study.” In <i>Optics for EUV, X-Ray, and Gamma-Ray Astronomy X</i>, Vol. 11822. SPIE, 2021. <a href=\"https://doi.org/10.1117/12.2596186\">https://doi.org/10.1117/12.2596186</a>.","apa":"Marshall, H. L., Heine, S., Davidson, R., Garner, A., Gullikson, E., Günther, M., … Schulz, N. (2021). The Globe Orbiting Soft X-ray (GOSoX) polarimeter concept study. In <i>Optics for EUV, X-Ray, and Gamma-Ray Astronomy X</i> (Vol. 11822). San Diego, CA, United States: SPIE. <a href=\"https://doi.org/10.1117/12.2596186\">https://doi.org/10.1117/12.2596186</a>"},"quality_controlled":"1","extern":"1","article_processing_charge":"No","publisher":"SPIE"}]