[{"OA_place":"publisher","isi":1,"author":[{"orcid":"0000-0002-8511-0254","id":"3153D6D4-F248-11E8-B48F-1D18A9856A87","full_name":"Ellis, Thomas","first_name":"Thomas","last_name":"Ellis"},{"full_name":"Field, David","orcid":"0000-0002-4014-8478","id":"419049E2-F248-11E8-B48F-1D18A9856A87","first_name":"David","last_name":"Field"},{"last_name":"Barton","first_name":"Nicholas H","id":"4880FE40-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8548-5240","full_name":"Barton, Nicholas H"}],"pmid":1,"external_id":{"pmid":["40751392"],"isi":["001542913000001"]},"oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","has_accepted_license":"1","acknowledgement":"We thank a large number of field volunteers for maintaining the population sampling, and Tom White for assistance with seed collection. We thank Sylvia Rebel for plating tissue for DNA extraction, as well as Sean Stankowski and two anonymous reviewers for feedback on the manuscript. ","file":[{"creator":"dernst","content_type":"application/pdf","file_id":"20911","date_updated":"2025-12-30T10:12:17Z","checksum":"5059ad4d74e6327b84b5282a39d36774","success":1,"file_size":1698605,"file_name":"2025_MolecularEcology_Ellis.pdf","date_created":"2025-12-30T10:12:17Z","relation":"main_file","access_level":"open_access"}],"department":[{"_id":"NiBa"}],"date_created":"2025-09-10T05:42:23Z","publisher":"Wiley","citation":{"apa":"Ellis, T., Field, D., &#38; Barton, N. H. (2025). Joint estimation of paternity, sibships and pollen dispersal in a snapdragon hybrid zone. <i>Molecular Ecology</i>. Wiley. <a href=\"https://doi.org/10.1111/mec.70051\">https://doi.org/10.1111/mec.70051</a>","ieee":"T. Ellis, D. Field, and N. H. Barton, “Joint estimation of paternity, sibships and pollen dispersal in a snapdragon hybrid zone,” <i>Molecular Ecology</i>, vol. 34, no. 15. Wiley, 2025.","ama":"Ellis T, Field D, Barton NH. Joint estimation of paternity, sibships and pollen dispersal in a snapdragon hybrid zone. <i>Molecular Ecology</i>. 2025;34(15). doi:<a href=\"https://doi.org/10.1111/mec.70051\">10.1111/mec.70051</a>","chicago":"Ellis, Thomas, David Field, and Nicholas H Barton. “Joint Estimation of Paternity, Sibships and Pollen Dispersal in a Snapdragon Hybrid Zone.” <i>Molecular Ecology</i>. Wiley, 2025. <a href=\"https://doi.org/10.1111/mec.70051\">https://doi.org/10.1111/mec.70051</a>.","short":"T. Ellis, D. Field, N.H. Barton, Molecular Ecology 34 (2025).","mla":"Ellis, Thomas, et al. “Joint Estimation of Paternity, Sibships and Pollen Dispersal in a Snapdragon Hybrid Zone.” <i>Molecular Ecology</i>, vol. 34, no. 15, e70051, Wiley, 2025, doi:<a href=\"https://doi.org/10.1111/mec.70051\">10.1111/mec.70051</a>.","ista":"Ellis T, Field D, Barton NH. 2025. Joint estimation of paternity, sibships and pollen dispersal in a snapdragon hybrid zone. Molecular Ecology. 34(15), e70051."},"status":"public","month":"09","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","image":"/images/cc_by_nc_nd.png","short":"CC BY-NC-ND (4.0)"},"quality_controlled":"1","date_published":"2025-09-02T00:00:00Z","publication_identifier":{"eissn":["1365-294X"],"issn":["0962-1083"]},"intvolume":"        34","issue":"15","_id":"20325","file_date_updated":"2025-12-30T10:12:17Z","doi":"10.1111/mec.70051","publication_status":"published","OA_type":"hybrid","day":"02","oa":1,"volume":34,"title":"Joint estimation of paternity, sibships and pollen dispersal in a snapdragon hybrid zone","year":"2025","language":[{"iso":"eng"}],"article_number":"e70051","abstract":[{"lang":"eng","text":"Inferring genealogical relationships of wild populations is useful because it gives direct estimates of mating patterns and variance in reproductive success. Inference can be improved by including information about parentage shared between siblings, or by modelling phenotypes or population data related to mating. However, we currently lack a framework to infer parent–offspring relationships, sibships and population parameters in a single analysis. To address this, we here extend a previous method, Fractional Analysis of Paternity and Sibships, to include population data for the case where one parent is known. We illustrate this with the example of pollen dispersal in a natural hybrid zone population of the snapdragon Antirrhinum majus. Pollen dispersal is leptokurtic, with half of mating events occurring within 30 m, but with a long tail of mating events up to 859 m. Using simulations, we find that both sibship and population information substantially improve pedigree reconstruction, and that we can expect to resolve median dispersal distances with high accuracy."}],"corr_author":"1","article_processing_charge":"Yes (via OA deal)","article_type":"original","date_updated":"2025-12-30T10:12:34Z","publication":"Molecular Ecology","type":"journal_article","license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","ddc":["570"],"scopus_import":"1"},{"title":"Mass-assisted local deconfinement in a confined Z2 lattice gauge theory","volume":112,"year":"2025","OA_type":"hybrid","day":"01","oa":1,"corr_author":"1","abstract":[{"lang":"eng","text":"Confinement is a prominent phenomenon in condensed-matter and high-energy physics that has recently become the focus of quantum-simulation experiments of lattice gauge theories (LGTs). As such, a theoretical understanding of the effect of confinement on LGT dynamics is not only of fundamental importance but also can lend itself to upcoming experiments. Here we show how confinement in a Z2 LGT can be  avoided by proximity to a resonance between the fermion mass and the electric field strength. Furthermore, we show that this local deconfinement can become global for certain initial conditions, where information transport occurs over the entire chain. In addition, we show how this can lead to strong quantum many-body scarring starting in different initial states. Our findings provide deeper insights into the nature of confinement in Z2 LGTs and can be tested on current and near-term quantum devices."}],"language":[{"iso":"eng"}],"article_number":"014301","ec_funded":1,"file_date_updated":"2025-09-10T06:47:23Z","publication_status":"published","doi":"10.1103/mfg2-t6gb","license":"https://creativecommons.org/licenses/by/4.0/","date_updated":"2025-09-30T14:34:43Z","PlanS_conform":"1","publication":"Physical Review B","type":"journal_article","ddc":["530"],"scopus_import":"1","article_type":"original","article_processing_charge":"Yes (via OA deal)","acknowledgement":"The authors are grateful to Fiona Burnell, Gaurav Gyawali, Zlatko Papić, Elliot Rosenberg, Pedram Roushan, Michael Schecter, and Una Šlanka for insightful discussions. J.-Y.D. acknowledges funding from the European Union's Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant No. 101034413. T.I. acknowledges support from the National Science Foundation under Grant No. DMR-2143635. J.C.H. acknowledges funding by the Emmy Noether Programme of the German Research Foundation (DFG) under Grant No. HA 8206/1-1.s, the Max Planck Society, the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy–EXC-2111–390814868, and the European Research Council (ERC) under the European Union's Horizon Europe research and innovation program (Grant Agreement No. 101165667) ERC Starting Grant QuSiGauge. This work is part of the Quantum Computing for High-Energy Physics (QC4HEP) working group.","has_accepted_license":"1","file":[{"success":1,"checksum":"dd919bb9c4c233eba047af4262e02835","file_size":3458424,"file_name":"2025_PhysReviewB_Desaules.pdf","relation":"main_file","access_level":"open_access","date_created":"2025-09-10T06:47:23Z","content_type":"application/pdf","creator":"dernst","file_id":"20333","date_updated":"2025-09-10T06:47:23Z"}],"author":[{"id":"6c292945-a610-11ed-9eec-c3be1ad62a80","full_name":"Desaules, Jean-Yves Marc","orcid":"0000-0002-3749-6375","last_name":"Desaules","first_name":"Jean-Yves Marc"},{"last_name":"Iadecola","first_name":"Thomas","full_name":"Iadecola, Thomas"},{"full_name":"Halimeh, Jad C.","first_name":"Jad C.","last_name":"Halimeh"}],"arxiv":1,"external_id":{"arxiv":["2404.11645"],"isi":["001530465500007"]},"isi":1,"OA_place":"publisher","oa_version":"Published Version","related_material":{"record":[{"relation":"research_data","id":"19791","status":"public"}]},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","date_published":"2025-07-01T00:00:00Z","quality_controlled":"1","project":[{"grant_number":"101034413","call_identifier":"H2020","name":"IST-BRIDGE: International postdoctoral program","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c"}],"publication_identifier":{"eissn":["2469-9969"],"issn":["2469-9950"]},"issue":"1","intvolume":"       112","_id":"20327","citation":{"chicago":"Desaules, Jean-Yves Marc, Thomas Iadecola, and Jad C. Halimeh. “Mass-Assisted Local Deconfinement in a Confined Z2 Lattice Gauge Theory.” <i>Physical Review B</i>. American Physical Society, 2025. <a href=\"https://doi.org/10.1103/mfg2-t6gb\">https://doi.org/10.1103/mfg2-t6gb</a>.","short":"J.-Y.M. Desaules, T. Iadecola, J.C. Halimeh, Physical Review B 112 (2025).","mla":"Desaules, Jean-Yves Marc, et al. “Mass-Assisted Local Deconfinement in a Confined Z2 Lattice Gauge Theory.” <i>Physical Review B</i>, vol. 112, no. 1, 014301, American Physical Society, 2025, doi:<a href=\"https://doi.org/10.1103/mfg2-t6gb\">10.1103/mfg2-t6gb</a>.","ista":"Desaules J-YM, Iadecola T, Halimeh JC. 2025. Mass-assisted local deconfinement in a confined Z2 lattice gauge theory. Physical Review B. 112(1), 014301.","ieee":"J.-Y. M. Desaules, T. Iadecola, and J. C. Halimeh, “Mass-assisted local deconfinement in a confined Z2 lattice gauge theory,” <i>Physical Review B</i>, vol. 112, no. 1. American Physical Society, 2025.","ama":"Desaules J-YM, Iadecola T, Halimeh JC. Mass-assisted local deconfinement in a confined Z2 lattice gauge theory. <i>Physical Review B</i>. 2025;112(1). doi:<a href=\"https://doi.org/10.1103/mfg2-t6gb\">10.1103/mfg2-t6gb</a>","apa":"Desaules, J.-Y. M., Iadecola, T., &#38; Halimeh, J. C. (2025). Mass-assisted local deconfinement in a confined Z2 lattice gauge theory. <i>Physical Review B</i>. American Physical Society. <a href=\"https://doi.org/10.1103/mfg2-t6gb\">https://doi.org/10.1103/mfg2-t6gb</a>"},"publisher":"American Physical Society","date_created":"2025-09-10T05:44:47Z","department":[{"_id":"MaSe"}],"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"status":"public","month":"07"},{"isi":1,"OA_place":"publisher","pmid":1,"author":[{"id":"43C61214-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5013-2843","full_name":"Ibáñez, Maria","first_name":"Maria","last_name":"Ibáñez"},{"full_name":"Boehme, Simon C.","last_name":"Boehme","first_name":"Simon C."},{"full_name":"Buonsanti, Raffaella","last_name":"Buonsanti","first_name":"Raffaella"},{"full_name":"De Roo, Jonathan","first_name":"Jonathan","last_name":"De Roo"},{"full_name":"Milliron, Delia J.","first_name":"Delia J.","last_name":"Milliron"},{"first_name":"Sandrine","last_name":"Ithurria","full_name":"Ithurria, Sandrine"},{"full_name":"Rogach, Andrey L.","first_name":"Andrey L.","last_name":"Rogach"},{"first_name":"Andreu","last_name":"Cabot","full_name":"Cabot, Andreu"},{"full_name":"Yarema, Maksym","first_name":"Maksym","last_name":"Yarema"},{"full_name":"Cossairt, Brandi M.","first_name":"Brandi M.","last_name":"Cossairt"},{"first_name":"Peter","last_name":"Reiss","full_name":"Reiss, Peter"},{"full_name":"Talapin, Dmitri V.","first_name":"Dmitri V.","last_name":"Talapin"},{"first_name":"Loredana","last_name":"Protesescu","full_name":"Protesescu, Loredana"},{"last_name":"Hens","first_name":"Zeger","full_name":"Hens, Zeger"},{"full_name":"Infante, Ivan","last_name":"Infante","first_name":"Ivan"},{"first_name":"Maryna I.","last_name":"Bodnarchuk","full_name":"Bodnarchuk, Maryna I."},{"full_name":"Ye, Xingchen","last_name":"Ye","first_name":"Xingchen"},{"last_name":"Wang","first_name":"Yuanyuan","full_name":"Wang, Yuanyuan"},{"first_name":"Hao","last_name":"Zhang","full_name":"Zhang, Hao"},{"first_name":"Emmanuel","last_name":"Lhuillier","full_name":"Lhuillier, Emmanuel"},{"full_name":"Klimov, Victor I.","first_name":"Victor I.","last_name":"Klimov"},{"full_name":"Utzat, Hendrik","last_name":"Utzat","first_name":"Hendrik"},{"last_name":"Rainò","first_name":"Gabriele","full_name":"Rainò, Gabriele"},{"first_name":"Cherie R.","last_name":"Kagan","full_name":"Kagan, Cherie R."},{"full_name":"Cargnello, Matteo","first_name":"Matteo","last_name":"Cargnello"},{"last_name":"Son","first_name":"Jae Sung","full_name":"Son, Jae Sung"},{"first_name":"Maksym V.","last_name":"Kovalenko","full_name":"Kovalenko, Maksym V."}],"external_id":{"isi":["001562960800001"],"pmid":["40902118"]},"oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","acknowledgement":"This article was inspired by the discussions and presentations at the NaNaX10 (Nanoscience with Nanocrystals) conference held in the Institute of Science and Technology of Austria (ISTA), July 3–7, 2023. M.I. acknowledges financial support from the Werner Siemens Foundation (WSS) and Abayomi Lawal, Christine Fiedler, Ihor Cherniukh, Francesco Milillo, Navita Jakhar, and Magali Lorion for all their help in editing this manuscript. M.I. would also like to acknowledge Christine Fiedler for the design of the TOC. S.C.B. acknowledges Dr. Dmitry Dirin for proofreading and the Weizmann-ETH Zurich Bridge Program for financial support. A.C. thanks Linlin Yang for drafting Figure 6 and acknowledges support from the project Sydecat with reference PID2022-136883OB-C22 under MCIN/AEI/10.13039/501100011033/FEDER, UE, and to the Departament de Recerca i Universitats of the Generalitat de Catalunya (2021 SGR 01581). M.C. acknowledges support from the Sloan Foundation, BASF Corporation, the Novo Nordisk Foundation CO2 Research Center (CORC), and the US Department of Energy, Chemical Sciences, Geosciences and Biosciences Division of the Office of Basic Energy Sciences, via the SUNCAT Center for Interface Science and Catalysis. D.V.T. acknowledges support from the U.S. National Science Foundation under Grant Number CHE-2404291. V.I.K. acknowledges support by the Solar Photochemistry Program of the Chemical Sciences, Biosciences and Geosciences Division, Office of Basic Energy Sciences, Office of Science, U.S. Department of Energy (overview of studies of spin-exchange interactions in Mn-doped QDs) and the Laboratory Directed Research and Development (LDRD) program at Los Alamos National Laboratory under project 20250443ER (overview of QD optical gain and lasing studies). E.L. acknowledges financial from the ERC grant blackQD (grant no. 756225) and AQDtive (grant no. 101086358), and from French state funds managed by the ANR through the grants Bright (ANR-21-CE24-0012-02), MixDferro (ANR-21-CE09-0029), Quicktera (ANR-22-CE09-0018), E-map (ANR-23-CE50-0025), DIRAC (ANR-24-ASM1-0001), camIR (ANR-24-CE42-2757), and Piquant (ANR-24-CE09-0786). L.P. acknowledges financial support from SOLAR NL, funded by the National Growth Fund in The Netherlands. G.R. acknowledges funding from the Swiss National Science Foundation (Grant No. 200021_192308, “Q-Light─Engineered Quantum Light Sources with Nanocrystal Assemblies”). P.R. acknowledges funding from European Union’s Horizon research and innovation program under grant agreement 101135704 (HortiQD project) and from the French Research Agency ANR (grant ANR-24-CE09-0786-01 PIQUANT). A.L.R. acknowledges financial support from the Innovation and Technology Commission of Hong Kong (ITS/027/22MX), and from the Research Grant Council of Hong Kong SAR through the RGC Senior Research Fellow Scheme (SRFS 2324-1S04). J.S.S. acknowledges financial support from the National Research Foundation of Korea (NRF) grant funded by the Ministry of Science and ICT (2022R1A2C3009129). X.Y. acknowledges support from the U.S. National Science Foundation under awards DMR-2102526 and CBET-2223453. Y.W. acknowledges the support from the Science and Technology Program in Jiangsu Province (BK20232041) and the National Natural Science Foundation of China (22171132 and 52472165). M.Y. acknowledges funding by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme, grant agreement No. 852751. I.I., Z.H. and M.K acknowledge the European Commission for funding (MSCA-DN Track The Twin, grant agreement 101168820). Z.H. acknowledges funding from the FWO-Vlaanderen (research projects G0B2921N and G0C5723N) and Ghent University (BOF-GOA 01G02124). H.Z. acknowledges W. Liu for editing Figure 19 and the financial support from Beijing Natural Science Foundation (JQ24003).","has_accepted_license":"1","file":[{"date_updated":"2025-12-30T09:35:44Z","file_id":"20909","content_type":"application/pdf","creator":"dernst","relation":"main_file","access_level":"open_access","date_created":"2025-12-30T09:35:44Z","success":1,"file_size":10956272,"checksum":"81144f848478a130721e9ffa87b6831e","file_name":"2025_ACSNano_Ibanez.pdf"}],"department":[{"_id":"MaIb"}],"date_created":"2025-09-10T05:47:13Z","publisher":"American Chemical Society","citation":{"ista":"Ibáñez M, Boehme SC, Buonsanti R, De Roo J, Milliron DJ, Ithurria S, Rogach AL, Cabot A, Yarema M, Cossairt BM, Reiss P, Talapin DV, Protesescu L, Hens Z, Infante I, Bodnarchuk MI, Ye X, Wang Y, Zhang H, Lhuillier E, Klimov VI, Utzat H, Rainò G, Kagan CR, Cargnello M, Son JS, Kovalenko MV. 2025. Prospects of nanoscience with nanocrystals: 2025 edition. ACS Nano. 19(36), 31969–32051.","short":"M. Ibáñez, S.C. Boehme, R. Buonsanti, J. De Roo, D.J. Milliron, S. Ithurria, A.L. Rogach, A. Cabot, M. Yarema, B.M. Cossairt, P. Reiss, D.V. Talapin, L. Protesescu, Z. Hens, I. Infante, M.I. Bodnarchuk, X. Ye, Y. Wang, H. Zhang, E. Lhuillier, V.I. Klimov, H. Utzat, G. Rainò, C.R. Kagan, M. Cargnello, J.S. Son, M.V. Kovalenko, ACS Nano 19 (2025) 31969–32051.","mla":"Ibáñez, Maria, et al. “Prospects of Nanoscience with Nanocrystals: 2025 Edition.” <i>ACS Nano</i>, vol. 19, no. 36, American Chemical Society, 2025, pp. 31969–32051, doi:<a href=\"https://doi.org/10.1021/acsnano.5c07838\">10.1021/acsnano.5c07838</a>.","chicago":"Ibáñez, Maria, Simon C. Boehme, Raffaella Buonsanti, Jonathan De Roo, Delia J. Milliron, Sandrine Ithurria, Andrey L. Rogach, et al. “Prospects of Nanoscience with Nanocrystals: 2025 Edition.” <i>ACS Nano</i>. American Chemical Society, 2025. <a href=\"https://doi.org/10.1021/acsnano.5c07838\">https://doi.org/10.1021/acsnano.5c07838</a>.","ieee":"M. Ibáñez <i>et al.</i>, “Prospects of nanoscience with nanocrystals: 2025 edition,” <i>ACS Nano</i>, vol. 19, no. 36. American Chemical Society, pp. 31969–32051, 2025.","apa":"Ibáñez, M., Boehme, S. C., Buonsanti, R., De Roo, J., Milliron, D. J., Ithurria, S., … Kovalenko, M. V. (2025). Prospects of nanoscience with nanocrystals: 2025 edition. <i>ACS Nano</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acsnano.5c07838\">https://doi.org/10.1021/acsnano.5c07838</a>","ama":"Ibáñez M, Boehme SC, Buonsanti R, et al. Prospects of nanoscience with nanocrystals: 2025 edition. <i>ACS Nano</i>. 2025;19(36):31969–32051. doi:<a href=\"https://doi.org/10.1021/acsnano.5c07838\">10.1021/acsnano.5c07838</a>"},"status":"public","month":"09","page":" 31969–32051","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"project":[{"name":"HighTE: The Werner Siemens Laboratory for the High Throughput Discovery of Semiconductors for Waste Heat Recovery","_id":"9B8F7476-BA93-11EA-9121-9846C619BF3A"}],"quality_controlled":"1","date_published":"2025-09-03T00:00:00Z","publication_identifier":{"issn":["1936-0851"],"eissn":["1936-086X"]},"issue":"36","intvolume":"        19","_id":"20329","file_date_updated":"2025-12-30T09:35:44Z","doi":"10.1021/acsnano.5c07838","publication_status":"published","OA_type":"hybrid","day":"03","oa":1,"volume":19,"title":"Prospects of nanoscience with nanocrystals: 2025 edition","year":"2025","language":[{"iso":"eng"}],"corr_author":"1","abstract":[{"text":"Nanocrystals (NCs) of various compositions have made important contributions to science and technology, with their impact recognized by the 2023 Nobel Prize in Chemistry for the discovery and synthesis of semiconductor quantum dots (QDs). Over four decades of research into NCs has led to numerous advancements in diverse fields, such as optoelectronics, catalysis, energy, medicine, and recently, quantum information and computing. The last 10 years since the predecessor perspective “Prospect of Nanoscience with Nanocrystals” was published in ACS Nano have seen NC research continuously evolve, yielding critical advances in fundamental understanding and practical applications. Mechanistic insights into NC formation have translated into precision control over NC size, shape, and composition. Emerging synthesis techniques have broadened the landscape of compounds obtainable in colloidal NC form. Sophistication in surface chemistry, jointly bolstered by theoretical models and experimental findings, has facilitated refined control over NC properties and represents a trusted gateway to enhanced NC stability and processability. The assembly of NCs into superlattices, along with two-dimensional (2D) photolithography and three-dimensional (3D) printing, has expanded their utility in creating materials with tailored properties. Applications of NCs are also flourishing, consolidating progress in fields targeted early on, such as optoelectronics and catalysis, and extending into areas ranging from quantum technology to phase-change memories. In this perspective, we review the extensive progress in research on NCs over the past decade and highlight key areas where future research may bring further breakthroughs.","lang":"eng"}],"article_processing_charge":"Yes (via OA deal)","article_type":"review","date_updated":"2025-12-30T09:35:54Z","PlanS_conform":"1","type":"journal_article","publication":"ACS Nano","ddc":["540"],"scopus_import":"1"},{"department":[{"_id":"BeVi"},{"_id":"NiBa"}],"date_created":"2025-09-10T05:48:04Z","publisher":"Oxford University Press","citation":{"ista":"Puixeu Sala G, Hayward L. 2025. The relationship between sexual dimorphism and intersex correlation: Do models support intuition? Genetics. 231(3), iyaf175.","short":"G. Puixeu Sala, L. Hayward, Genetics 231 (2025).","mla":"Puixeu Sala, Gemma, and Laura Hayward. “The Relationship between Sexual Dimorphism and Intersex Correlation: Do Models Support Intuition?” <i>Genetics</i>, vol. 231, no. 3, iyaf175, Oxford University Press, 2025, doi:<a href=\"https://doi.org/10.1093/genetics/iyaf175\">10.1093/genetics/iyaf175</a>.","chicago":"Puixeu Sala, Gemma, and Laura Hayward. “The Relationship between Sexual Dimorphism and Intersex Correlation: Do Models Support Intuition?” <i>Genetics</i>. Oxford University Press, 2025. <a href=\"https://doi.org/10.1093/genetics/iyaf175\">https://doi.org/10.1093/genetics/iyaf175</a>.","ama":"Puixeu Sala G, Hayward L. The relationship between sexual dimorphism and intersex correlation: Do models support intuition? <i>Genetics</i>. 2025;231(3). doi:<a href=\"https://doi.org/10.1093/genetics/iyaf175\">10.1093/genetics/iyaf175</a>","apa":"Puixeu Sala, G., &#38; Hayward, L. (2025). The relationship between sexual dimorphism and intersex correlation: Do models support intuition? <i>Genetics</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/genetics/iyaf175\">https://doi.org/10.1093/genetics/iyaf175</a>","ieee":"G. Puixeu Sala and L. Hayward, “The relationship between sexual dimorphism and intersex correlation: Do models support intuition?,” <i>Genetics</i>, vol. 231, no. 3. Oxford University Press, 2025."},"status":"public","month":"11","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"project":[{"grant_number":"25817","name":"Sexual conflict: resolution, constraints and biomedical implications","_id":"9B9DFC9E-BA93-11EA-9121-9846C619BF3A"},{"call_identifier":"H2020","_id":"2564DBCA-B435-11E9-9278-68D0E5697425","name":"International IST Doctoral Program","grant_number":"665385"},{"_id":"bd6958e0-d553-11ed-ba76-86eba6a76c00","name":"Understanding the evolution of continuous genomes","grant_number":"101055327"}],"quality_controlled":"1","date_published":"2025-11-01T00:00:00Z","issue":"3","publication_identifier":{"issn":["1943-2631"]},"intvolume":"       231","_id":"20330","OA_place":"publisher","isi":1,"author":[{"id":"33AB266C-F248-11E8-B48F-1D18A9856A87","full_name":"Puixeu Sala, Gemma","orcid":"0000-0001-8330-1754","last_name":"Puixeu Sala","first_name":"Gemma"},{"last_name":"Hayward","first_name":"Laura","full_name":"Hayward, Laura","id":"fc885ee5-24bf-11eb-ad7b-bcc5104c0c1b"}],"external_id":{"isi":["001598595000001"]},"oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","has_accepted_license":"1","acknowledgement":"We thank Tim Connallon for useful discussions and correspondence, Himani Sachdeva and Nick Barton for comments on the manuscript and the Scientific Computing unit at ISTA for technical support. GP is the recipient of a DOC Fellowship of the Austrian Academy of Sciences at the Institute of Science and Technology Austria (DOC 25817) and received funding from the European Union’s Horizon 2020 research and innovation program under the Marie Skłodowska-Curie Grant (agreement no. 665385). LH received funding from the European Research Council, under the HaplotypeStructure Grant (grant no. 101055327) to Nick Barton.","file":[{"date_updated":"2026-01-05T13:03:18Z","file_id":"20946","creator":"dernst","content_type":"application/pdf","date_created":"2026-01-05T13:03:18Z","relation":"main_file","access_level":"open_access","checksum":"bbb73bbf8617812d4d8db4af92be9538","success":1,"file_size":1550562,"file_name":"2025_Genetics_Puixeu.pdf"}],"article_processing_charge":"Yes (via OA deal)","article_type":"original","PlanS_conform":"1","date_updated":"2026-01-05T13:04:07Z","publication":"Genetics","type":"journal_article","ddc":["570"],"scopus_import":"1","file_date_updated":"2026-01-05T13:03:18Z","ec_funded":1,"doi":"10.1093/genetics/iyaf175","publication_status":"published","day":"01","OA_type":"hybrid","oa":1,"title":"The relationship between sexual dimorphism and intersex correlation: Do models support intuition?","volume":231,"year":"2025","article_number":"iyaf175","language":[{"iso":"eng"}],"corr_author":"1","abstract":[{"text":"The evolution of sexual dimorphism (the difference in average trait values between females and males, SD), is often thought to be constrained by shared genetic architecture between the sexes. Indeed, it is commonly expected that SD should negatively correlate with the intersex correlation (the genetic correlation between effects of segregating variants in females and males, r fm), either because (1) traits with ancestrally low r fm are less constrained in their ability to respond to sex-specific selection and thus evolve to be more dimorphic, or because (2) sex-specific selection, driving sexual dimorphism evolution, also acts to reduce r fm. Despite the intuitive appeal and prominence of these ideas, their generality and the conditions in which they hold remain unclear. Here, we develop models incorporating sex-specific stabilizing selection, mutation and genetic drift to examine the relationship between r fm and SD. We show that the two commonly-discussed mechanisms with the potential to generate a negative correlation between SD and r fm could just as easily generate a positive association, since the standard line of reasoning hinges on a hidden assumption that sex-specific adaptation more frequently favors increased dimorphism than reduced dimorphism. Our results provide, to our knowledge, the first mechanistic framework for understanding the conditions under which a correlation between r fm and SD may arise and offer a compelling explanation for inconsistent empirical evidence. We also make the intriguing observation that—even when selection between the two sexes is identical—drift generates nonzero SD. We quantify this effect and discuss its significance.","lang":"eng"}]},{"date_published":"2025-08-25T00:00:00Z","quality_controlled":"1","issue":"36","publication_identifier":{"eissn":["1530-6992"],"issn":["1530-6984"]},"intvolume":"        25","_id":"20331","publisher":"American Chemical Society","citation":{"ama":"York E, Stone I, Shi W, Roy X, Venkataraman L. Tuning conductance in BODIPY-based single-molecule junctions. <i>Nano Letters</i>. 2025;25(36):13697-13702. doi:<a href=\"https://doi.org/10.1021/acs.nanolett.5c03764\">10.1021/acs.nanolett.5c03764</a>","apa":"York, E., Stone, I., Shi, W., Roy, X., &#38; Venkataraman, L. (2025). Tuning conductance in BODIPY-based single-molecule junctions. <i>Nano Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acs.nanolett.5c03764\">https://doi.org/10.1021/acs.nanolett.5c03764</a>","ieee":"E. York, I. Stone, W. Shi, X. Roy, and L. Venkataraman, “Tuning conductance in BODIPY-based single-molecule junctions,” <i>Nano Letters</i>, vol. 25, no. 36. American Chemical Society, pp. 13697–13702, 2025.","chicago":"York, Emma, Ilana Stone, Wanzhuo Shi, Xavier Roy, and Latha Venkataraman. “Tuning Conductance in BODIPY-Based Single-Molecule Junctions.” <i>Nano Letters</i>. American Chemical Society, 2025. <a href=\"https://doi.org/10.1021/acs.nanolett.5c03764\">https://doi.org/10.1021/acs.nanolett.5c03764</a>.","short":"E. York, I. Stone, W. Shi, X. Roy, L. Venkataraman, Nano Letters 25 (2025) 13697–13702.","mla":"York, Emma, et al. “Tuning Conductance in BODIPY-Based Single-Molecule Junctions.” <i>Nano Letters</i>, vol. 25, no. 36, American Chemical Society, 2025, pp. 13697–702, doi:<a href=\"https://doi.org/10.1021/acs.nanolett.5c03764\">10.1021/acs.nanolett.5c03764</a>.","ista":"York E, Stone I, Shi W, Roy X, Venkataraman L. 2025. Tuning conductance in BODIPY-based single-molecule junctions. Nano Letters. 25(36), 13697–13702."},"date_created":"2025-09-10T05:48:29Z","department":[{"_id":"LaVe"}],"page":"13697-13702","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"status":"public","month":"08","acknowledgement":"We thank the National Science Foundation (No. NSF-DMR 2241180) for supporting this research. Synthetic work at Columbia was funded in part by the Air Force Office of Scientific Research (AFOSR), under Grant No. FA9550-22-1-0389. The cryoprobe on the 500 MHz NMR instrument used in this research at Columbia was purchased through the NIH Award No. S10OD026749. This work was supported in part by the Institute of Science and Technology Austria. HRMS sample preparation, analysis, and data evaluation were performed by Aikaterina Paraskevopoulou, Mass Spec Service, LSF, ISTA.","has_accepted_license":"1","file":[{"content_type":"application/pdf","creator":"dernst","date_updated":"2025-12-30T09:39:44Z","file_id":"20910","file_name":"2025_NanoLetters_York.pdf","file_size":3144989,"success":1,"checksum":"bac881601e1f33c3cf8f51d50b958e68","access_level":"open_access","relation":"main_file","date_created":"2025-12-30T09:39:44Z"}],"author":[{"full_name":"York, Emma","id":"08dde91e-8e0a-11f0-9d7d-9e8d80864f16","last_name":"York","first_name":"Emma"},{"first_name":"Ilana","last_name":"Stone","full_name":"Stone, Ilana"},{"full_name":"Shi, Wanzhuo","id":"a3010425-87c8-11f0-8106-bec32bea74da","first_name":"Wanzhuo","last_name":"Shi"},{"full_name":"Roy, Xavier","first_name":"Xavier","last_name":"Roy"},{"first_name":"Latha","last_name":"Venkataraman","orcid":"0000-0002-6957-6089","id":"9ebb78a5-cc0d-11ee-8322-fae086a32caf","full_name":"Venkataraman, Latha"}],"pmid":1,"external_id":{"isi":["001557017200001"],"pmid":["40855728"]},"OA_place":"publisher","isi":1,"oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","PlanS_conform":"1","date_updated":"2025-12-30T09:39:55Z","publication":"Nano Letters","type":"journal_article","ddc":["540"],"scopus_import":"1","article_type":"letter_note","article_processing_charge":"Yes (via OA deal)","title":"Tuning conductance in BODIPY-based single-molecule junctions","volume":25,"year":"2025","OA_type":"hybrid","day":"25","oa":1,"acknowledged_ssus":[{"_id":"LifeSc"}],"abstract":[{"lang":"eng","text":"Here, we present a foundational investigation of charge transport through three BODIPY-based molecules using the scanning tunneling microscope–break junction (STM-BJ) technique. We demonstrate that molecular conductance through the BODIPY core can be measured by introducing aurophilic linkers at the 2,6-positions. By varying these linkers, we systematically modulate the frontier molecular orbital energies and fine-tune transport behavior. Our experimental results are supported by DFT-based calculations, which feature a new computationally efficient correction to standard PBE-level transmission predictions. Together, these findings establish the viability of BODIPY-based systems for molecular junction applications and lay the groundwork for future studies of their single-molecule optoelectronic properties."}],"corr_author":"1","language":[{"iso":"eng"}],"file_date_updated":"2025-12-30T09:39:44Z","publication_status":"published","doi":"10.1021/acs.nanolett.5c03764"},{"acknowledgement":"We thank Carolina Camelo for making schematics for this review.","has_accepted_license":"1","file":[{"date_created":"2025-12-30T10:21:00Z","access_level":"open_access","relation":"main_file","file_name":"2025_SemCellDevBiology_Hofmann.pdf","success":1,"checksum":"80ea6cbb004853bb1e87db3422a74aca","file_size":2778561,"file_id":"20914","date_updated":"2025-12-30T10:21:00Z","creator":"dernst","content_type":"application/pdf"}],"oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"first_name":"Laura","last_name":"Hofmann","full_name":"Hofmann, Laura","id":"b88d43f2-dc74-11ea-a0a7-e41b7912e031"},{"id":"39427864-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-0912-4566","full_name":"Heisenberg, Carl-Philipp J","first_name":"Carl-Philipp J","last_name":"Heisenberg"}],"pmid":1,"external_id":{"isi":["001567260100001"],"pmid":["40913907"]},"isi":1,"OA_place":"publisher","publication_identifier":{"eissn":["1096-3634"],"issn":["1084-9521"]},"intvolume":"       175","_id":"20349","date_published":"2025-12-01T00:00:00Z","quality_controlled":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"status":"public","month":"12","publisher":"Elsevier","citation":{"chicago":"Hofmann, Laura, and Carl-Philipp J Heisenberg. “Decoding Zebrafish Oogenesis: From Primordial Germ Cell Development to Fertilization.” <i>Seminars in Cell and Developmental Biology</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.semcdb.2025.103650\">https://doi.org/10.1016/j.semcdb.2025.103650</a>.","mla":"Hofmann, Laura, and Carl-Philipp J. Heisenberg. “Decoding Zebrafish Oogenesis: From Primordial Germ Cell Development to Fertilization.” <i>Seminars in Cell and Developmental Biology</i>, vol. 175, 103650, Elsevier, 2025, doi:<a href=\"https://doi.org/10.1016/j.semcdb.2025.103650\">10.1016/j.semcdb.2025.103650</a>.","short":"L. Hofmann, C.-P.J. Heisenberg, Seminars in Cell and Developmental Biology 175 (2025).","ista":"Hofmann L, Heisenberg C-PJ. 2025. Decoding zebrafish oogenesis: From primordial germ cell development to fertilization. Seminars in Cell and Developmental Biology. 175, 103650.","apa":"Hofmann, L., &#38; Heisenberg, C.-P. J. (2025). Decoding zebrafish oogenesis: From primordial germ cell development to fertilization. <i>Seminars in Cell and Developmental Biology</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.semcdb.2025.103650\">https://doi.org/10.1016/j.semcdb.2025.103650</a>","ieee":"L. Hofmann and C.-P. J. Heisenberg, “Decoding zebrafish oogenesis: From primordial germ cell development to fertilization,” <i>Seminars in Cell and Developmental Biology</i>, vol. 175. Elsevier, 2025.","ama":"Hofmann L, Heisenberg C-PJ. Decoding zebrafish oogenesis: From primordial germ cell development to fertilization. <i>Seminars in Cell and Developmental Biology</i>. 2025;175. doi:<a href=\"https://doi.org/10.1016/j.semcdb.2025.103650\">10.1016/j.semcdb.2025.103650</a>"},"department":[{"_id":"CaHe"}],"date_created":"2025-09-14T22:01:32Z","corr_author":"1","abstract":[{"lang":"eng","text":"Oogenesis – the formation and development of an oocyte – is fundamental to reproduction and embryonic development. Due to its accessibility to genetic manipulations and the ability to culture and experimentally manipulate oocytes ex vivo, zebrafish has emerged as a powerful vertebrate model system for studying oogenesis. In this review, we provide a comprehensive overview of zebrafish oogenesis, from early germ cell formation to oocyte maturation and fertilization. We discuss recent advances in uncovering the molecular and cellular mechanisms driving this complex process and highlight key knowledge gaps that remain to be addressed."}],"language":[{"iso":"eng"}],"article_number":"103650","volume":175,"title":"Decoding zebrafish oogenesis: From primordial germ cell development to fertilization","year":"2025","OA_type":"hybrid","day":"01","oa":1,"publication_status":"published","doi":"10.1016/j.semcdb.2025.103650","file_date_updated":"2025-12-30T10:21:00Z","ddc":["570"],"scopus_import":"1","date_updated":"2025-12-30T10:21:13Z","PlanS_conform":"1","publication":"Seminars in Cell and Developmental Biology","type":"journal_article","article_type":"review","article_processing_charge":"Yes (via OA deal)"},{"department":[{"_id":"LiBu"}],"date_created":"2025-09-14T22:01:32Z","publisher":"EDP Sciences","citation":{"apa":"Vanlaer, V., Bowman, D. M., Burssens, S., Das, S. B., Bugnet, L. A., Mathis, S., &#38; Aerts, C. (2025). Interior rotation modelling of the β Cep pulsator HD 192575 including multiplet asymmetries. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a href=\"https://doi.org/10.1051/0004-6361/202452885\">https://doi.org/10.1051/0004-6361/202452885</a>","ieee":"V. Vanlaer <i>et al.</i>, “Interior rotation modelling of the β Cep pulsator HD 192575 including multiplet asymmetries,” <i>Astronomy &#38; Astrophysics</i>, vol. 701. EDP Sciences, 2025.","ama":"Vanlaer V, Bowman DM, Burssens S, et al. Interior rotation modelling of the β Cep pulsator HD 192575 including multiplet asymmetries. <i>Astronomy &#38; Astrophysics</i>. 2025;701. doi:<a href=\"https://doi.org/10.1051/0004-6361/202452885\">10.1051/0004-6361/202452885</a>","short":"V. Vanlaer, D.M. Bowman, S. Burssens, S.B. Das, L.A. Bugnet, S. Mathis, C. Aerts, Astronomy &#38; Astrophysics 701 (2025).","mla":"Vanlaer, V., et al. “Interior Rotation Modelling of the β Cep Pulsator HD 192575 Including Multiplet Asymmetries.” <i>Astronomy &#38; Astrophysics</i>, vol. 701, A5, EDP Sciences, 2025, doi:<a href=\"https://doi.org/10.1051/0004-6361/202452885\">10.1051/0004-6361/202452885</a>.","ista":"Vanlaer V, Bowman DM, Burssens S, Das SB, Bugnet LA, Mathis S, Aerts C. 2025. Interior rotation modelling of the β Cep pulsator HD 192575 including multiplet asymmetries. Astronomy &#38; Astrophysics. 701, A5.","chicago":"Vanlaer, V., D. M. Bowman, S. Burssens, Srijan B Das, Lisa Annabelle Bugnet, S. Mathis, and C. Aerts. “Interior Rotation Modelling of the β Cep Pulsator HD 192575 Including Multiplet Asymmetries.” <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2025. <a href=\"https://doi.org/10.1051/0004-6361/202452885\">https://doi.org/10.1051/0004-6361/202452885</a>."},"month":"09","status":"public","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"project":[{"_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","name":"IST-BRIDGE: International postdoctoral program","call_identifier":"H2020","grant_number":"101034413"},{"grant_number":"101165631","_id":"914d8549-16d5-11f0-9cad-bbe6324c93a9","name":"Unveiling the mysteries of stellar dynamics: a pioneering journey in magnetoasteroseismology"}],"quality_controlled":"1","date_published":"2025-09-01T00:00:00Z","_id":"20350","intvolume":"       701","publication_identifier":{"eissn":["1432-0746"],"issn":["0004-6361"]},"isi":1,"OA_place":"publisher","arxiv":1,"external_id":{"isi":["001561561200007"],"arxiv":["2506.19948"]},"author":[{"last_name":"Vanlaer","first_name":"V.","full_name":"Vanlaer, V."},{"first_name":"D. M.","last_name":"Bowman","full_name":"Bowman, D. M."},{"first_name":"S.","last_name":"Burssens","full_name":"Burssens, S."},{"id":"9ce7c423-dacf-11ed-8942-e09c6cb27149","orcid":"0000-0003-0896-7972","full_name":"Das, Srijan B","last_name":"Das","first_name":"Srijan B"},{"last_name":"Bugnet","first_name":"Lisa Annabelle","orcid":"0000-0003-0142-4000","full_name":"Bugnet, Lisa Annabelle","id":"d9edb345-f866-11ec-9b37-d119b5234501"},{"full_name":"Mathis, S.","last_name":"Mathis","first_name":"S."},{"full_name":"Aerts, C.","last_name":"Aerts","first_name":"C."}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","file":[{"creator":"dernst","content_type":"application/pdf","date_updated":"2025-09-15T06:58:09Z","file_id":"20354","file_name":"2025_AstronomyAstrophysics_Vanlaer.pdf","success":1,"file_size":3175077,"checksum":"9ee9f34cf86305602d6cb3e07a1cc1a6","date_created":"2025-09-15T06:58:09Z","access_level":"open_access","relation":"main_file"}],"has_accepted_license":"1","acknowledgement":"The authors appreciated the critical comments from the\r\nreferee, which encouraged V.V. to embark upon a new code development\r\nsprint. V.V. gratefully acknowledges support from the Research Foundation\r\nFlanders (FWO) under grant agreement N◦1156923N (PhD Fellowship) and\r\nN\r\n◦K233724N (Travel grant). D.M.B. gratefully acknowledges support from\r\nthe Research Foundation Flanders (FWO; grant number: 1286521N), and UK\r\nResearch and Innovation (UKRI) in the form of a Frontier Research grant under\r\nthe UK government’s ERC Horizon Europe funding guarantee (SYMPHONY;\r\ngrant number: EP/Y031059/1), and a Royal Society University Research Fellowship (URF; grant number: URF\\R1\\231631). S.B.D. acknowledges funding from\r\nthe European Union’s Horizon 2020 research and innovation programme under\r\nthe Marie Skłodowska-Curie grant agreement No 101034413. L.B. gratefully\r\nacknowledges support from the European Research Council (ERC) under the\r\nHorizon Europe programme (Calcifer; Starting Grant agreement N◦101165631).\r\nS.M. acknowledges support from the PLATO CNES grant at CEA/DAp.C.A.\r\nacknowledges financial support from the Research Foundation Flanders (FWO)\r\nunder grant K802922N (Sabbatical leave); she is grateful for the kind hospitality\r\noffered by CEA/Saclay during her sabbatical work visits in the spring of 2023.\r\nThe research leading to these results has received funding from the European\r\nResearch Council (ERC) under the Horizon Europe programme (Synergy Grant\r\nagreement N◦101071505: 4D-STAR). While funded by the European Union,\r\nviews and opinions expressed are however those of the author(s) only and do\r\nnot necessarily reflect those of the European Union or the European Research\r\nCouncil. Neither the European Union nor the granting authority can be held\r\nresponsible for them. The TESS data presented in this paper were obtained from\r\nthe Mikulski Archive for Space Telescopes (MAST) at the Space Telescope Science Institute (STScI), which is operated by the Association of Universities for\r\nResearch in Astronomy, Inc., under NASA contract NAS5-26555. Support to\r\nMAST for these data is provided by the NASA Office of Space Science via grant\r\nNAG5-7584 and by other grants and contracts. Funding for the TESS mission\r\nwas provided by the NASA Explorer Program.","article_processing_charge":"No","article_type":"original","publication":"Astronomy & Astrophysics","type":"journal_article","date_updated":"2026-02-16T12:12:53Z","PlanS_conform":"1","scopus_import":"1","ddc":["520"],"file_date_updated":"2025-09-15T06:58:09Z","ec_funded":1,"doi":"10.1051/0004-6361/202452885","publication_status":"published","oa":1,"OA_type":"diamond","day":"01","year":"2025","title":"Interior rotation modelling of the β Cep pulsator HD 192575 including multiplet asymmetries","volume":701,"article_number":"A5","language":[{"iso":"eng"}],"abstract":[{"lang":"eng","text":"Context. Rotation plays an important role in stellar evolution. However, the mechanisms behind the transport of angular momentum in stars at various stages of their evolution are not well understood. To improve our understanding of these processes, it is necessary to measure and validate the internal rotation profiles of stars across different stages of evolution and mass regimes.\r\nAims. Our aim is to constrain the internal rotation profile of the 12-M⊙ β Cep pulsator HD 192575 from the observed pulsational multiplets and the asymmetries of their component frequencies.\r\nMethods. We updated the forward asteroseismic modelling of HD 192575 based on new TESS observations. We inverted the rotation profile from the symmetric part of the splittings and computed the multiplet asymmetries due to the Coriolis force and stellar deformation, which we treated perturbatively. We compared the computed asymmetries with the observed asymmetries.\r\nResults. Our new forward asteroseismic modelling is in agreement with previous results but with increased uncertainties, partially due to increased frequency precision, which required us to relax certain constraints. Ambiguity in the mode identification is the main source of the uncertainty, which also affects the inferred rotation profiles. Almost all acceptable rotation profiles occur in the regime below 0.4 d−1 and favour weak radial differential rotation, with a ratio of core to envelope rotation of less than 2. We find that the quality of the match between the observed and theoretically predicted mode asymmetries is strongly dependent on the mode identification and the internal structure of the star.\r\nConclusions. Our results offer the first detailed rotation inversion for a β Cep pulsator. They show that the rotation profile and the mode asymmetries provide a valuable tool for further constraining the evolutionary properties of HD 192575, and in particular the details of angular momentum transport in massive stars."}]},{"_id":"20351","publication_identifier":{"eissn":["2375-2548"]},"issue":"35","intvolume":"        11","date_published":"2025-08-29T00:00:00Z","project":[{"grant_number":"101045340","name":"Synthetic and structural biology of Rab GTPase networks","_id":"bd6ae2ca-d553-11ed-ba76-a4aa239da5ee"}],"quality_controlled":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"page":"eadx2893","month":"08","status":"public","publisher":"AAAS","citation":{"chicago":"Wilmes, Stephan, Jesse Tönjes, Maik Drechsler, Anita Ruf, Jan Hannes Schäfer, Anna Lürick, Dovile Januliene, et al. “Mechanistic Adaptation of the Metazoan RabGEFs Mon1-Ccz1 and Fuzzy-Inturned.” <i>Science Advances</i>. AAAS, 2025. <a href=\"https://doi.org/10.1126/sciadv.adx2893\">https://doi.org/10.1126/sciadv.adx2893</a>.","short":"S. Wilmes, J. Tönjes, M. Drechsler, A. Ruf, J.H. Schäfer, A. Lürick, D. Januliene, S. Apelt, D. Di Iorio, S.V. Wegner, M. Loose, A. Moeller, A. Paululat, D. Kümmel, Science Advances 11 (2025) eadx2893.","mla":"Wilmes, Stephan, et al. “Mechanistic Adaptation of the Metazoan RabGEFs Mon1-Ccz1 and Fuzzy-Inturned.” <i>Science Advances</i>, vol. 11, no. 35, AAAS, 2025, p. eadx2893, doi:<a href=\"https://doi.org/10.1126/sciadv.adx2893\">10.1126/sciadv.adx2893</a>.","ista":"Wilmes S, Tönjes J, Drechsler M, Ruf A, Schäfer JH, Lürick A, Januliene D, Apelt S, Di Iorio D, Wegner SV, Loose M, Moeller A, Paululat A, Kümmel D. 2025. Mechanistic adaptation of the metazoan RabGEFs Mon1-Ccz1 and Fuzzy-Inturned. Science Advances. 11(35), eadx2893.","ieee":"S. Wilmes <i>et al.</i>, “Mechanistic adaptation of the metazoan RabGEFs Mon1-Ccz1 and Fuzzy-Inturned,” <i>Science Advances</i>, vol. 11, no. 35. AAAS, p. eadx2893, 2025.","apa":"Wilmes, S., Tönjes, J., Drechsler, M., Ruf, A., Schäfer, J. H., Lürick, A., … Kümmel, D. (2025). Mechanistic adaptation of the metazoan RabGEFs Mon1-Ccz1 and Fuzzy-Inturned. <i>Science Advances</i>. AAAS. <a href=\"https://doi.org/10.1126/sciadv.adx2893\">https://doi.org/10.1126/sciadv.adx2893</a>","ama":"Wilmes S, Tönjes J, Drechsler M, et al. Mechanistic adaptation of the metazoan RabGEFs Mon1-Ccz1 and Fuzzy-Inturned. <i>Science Advances</i>. 2025;11(35):eadx2893. doi:<a href=\"https://doi.org/10.1126/sciadv.adx2893\">10.1126/sciadv.adx2893</a>"},"department":[{"_id":"MaLo"}],"date_created":"2025-09-14T22:01:32Z","file":[{"date_updated":"2025-09-15T07:23:12Z","file_id":"20355","content_type":"application/pdf","creator":"dernst","access_level":"open_access","relation":"main_file","date_created":"2025-09-15T07:23:12Z","file_name":"2025_ScienceAdvance_Wilmes.pdf","file_size":3434827,"checksum":"a3de801f3c6c1deadd7099d965db799a","success":1}],"acknowledgement":"We thank A.-M. Lawrence-Dörner and B. Berkenfeld for technical assistance and the members of the Kümmel Lab for constructive feedback. We are grateful to C. Ungermann and L. Langemeyer for insightful discussions and to F. Barr for providing plasmids encoding Fuzzy, Inturned, Rab23, and Rsg1. The template clone Flag-ciBAR1 was a gift from K.-I. Takemaru (Addgene, plasmid #200440). We thank the Bloomington Drosophila Stock center (BDSC) and DSHB for providing fly stocks and antibodies. This work was supported by the German Research Foundation (DFG) through the grants SFB1557-P10 (D.K.), SFB1557-P11 (A.M.), and SFB1577-P6, PA517/12-2, PA517/14-1, PA517/15-1, and PA517/16-1 (A.P.). Cryo-EM data were collected at the infrastructure of the University of Osnabrück, funded by the DFG (project number 455249646). J.-H.S. was supported by the Friedrich-Ebert Foundation. M.L. acknowledges funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation program (grant agreement number 101045340).","has_accepted_license":"1","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","oa_version":"Published Version","DOAJ_listed":"1","external_id":{"pmid":["40864718"],"isi":["001559806100033"]},"pmid":1,"author":[{"last_name":"Wilmes","first_name":"Stephan","full_name":"Wilmes, Stephan"},{"full_name":"Tönjes, Jesse","first_name":"Jesse","last_name":"Tönjes"},{"full_name":"Drechsler, Maik","last_name":"Drechsler","first_name":"Maik"},{"full_name":"Ruf, Anita","first_name":"Anita","last_name":"Ruf"},{"first_name":"Jan Hannes","last_name":"Schäfer","full_name":"Schäfer, Jan Hannes"},{"first_name":"Anna","last_name":"Lürick","full_name":"Lürick, Anna"},{"full_name":"Januliene, Dovile","first_name":"Dovile","last_name":"Januliene"},{"first_name":"Steven","last_name":"Apelt","full_name":"Apelt, Steven"},{"full_name":"Di Iorio, Daniele","first_name":"Daniele","last_name":"Di Iorio"},{"first_name":"Seraphine V.","last_name":"Wegner","full_name":"Wegner, Seraphine V."},{"last_name":"Loose","first_name":"Martin","orcid":"0000-0001-7309-9724","full_name":"Loose, Martin","id":"462D4284-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Arne","last_name":"Moeller","full_name":"Moeller, Arne"},{"last_name":"Paululat","first_name":"Achim","full_name":"Paululat, Achim"},{"last_name":"Kümmel","first_name":"Daniel","full_name":"Kümmel, Daniel"}],"isi":1,"OA_place":"publisher","scopus_import":"1","ddc":["570"],"type":"journal_article","publication":"Science Advances","PlanS_conform":"1","date_updated":"2025-09-30T14:40:27Z","article_type":"original","article_processing_charge":"Yes","abstract":[{"text":"Rab GTPases organize intracellular trafficking and provide identity to organelles. Their spatiotemporal activation by guanine nucleotide exchange factors (GEFs) is tightly controlled to ensure fidelity. Our structural and functional comparison of the tri-longin domain RabGEFs Mon1-Ccz1 and Fuzzy-Inturned reveals the molecular basis for their target specificity. Both complexes rely on a conserved sequence motif of their substrate GTPases for the catalytic mechanism, while secondary interactions allow discrimination between targets. We also find that dimeric Mon1-Ccz1 from fungi and the metazoan homologs with the additional third subunit RMC1/Bulli bind membranes through electrostatic interactions via distinct interfaces. Protein-lipid interaction studies and functional characterization in flies reveal an essential function of RMC1/Bulli as mediator of GEF complex membrane recruitment. In the case of Fuzzy-Inturned, reconstitution experiments demonstrate that the BAR (Bin-Amphiphysin-Rvs) domain protein CiBAR1 can support membrane recruitment of the GEF. Collectively, our study demonstrates the molecular basis for the adaptation of TLD-RabGEFs to different cellular functions.","lang":"eng"}],"language":[{"iso":"eng"}],"year":"2025","title":"Mechanistic adaptation of the metazoan RabGEFs Mon1-Ccz1 and Fuzzy-Inturned","volume":11,"oa":1,"OA_type":"gold","day":"29","publication_status":"published","doi":"10.1126/sciadv.adx2893","file_date_updated":"2025-09-15T07:23:12Z"},{"acknowledgement":"Based on data collected at the European Southern Observatory (ESO) under programme ID 112.25R7. The research leading to these results has received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 and Horizon Europe research and innovation programme (grant agreement numbers 772225: MULTIPLES, 772086: ASSESS and 945806: TEL-STARS, ADG101054731: Stellar-BHs-SDSS-V, and 101164755: METAL). This research was supported by the Israel Science Foundation (ISF) under grant number 0603225041. We acknowledge support from the Science and Technology Facilities Council (research grant ST/V000853/1 and ST/V000233/1), UK Research and Innovation (UKRI) and the UK government’s ERC Horizon Europe funding guarantee (grant number EP/Y031059/1), a Royal Society University Research Fellowship (grant number URF\\R1\\231631), a Royal Society–Science Foundation Ireland University Research Fellowship, the German Deutsche Forschungsgemeinschaft (Project-ID 496854903, 445674056 and 443790621, Germany’s Excellence Strategy EXC 2181/1-390900948), the Klaus Tschira Foundation, the JSPS Kakenhi Grant-in-Aid for Scientific Research (23K19071) and international fellowships (at the Graduate school of Science, Tokyo University), the Australian Research Council (ARC) Centre of Excellence for Gravitational Wave Discovery (OzGrav; project number CE230100016), the Deutsches Zentrum für Luft und Raumfahrt (DLR) grants FKZ 50OR2005 and 50OR2306, Agencia Española de Investigación (AEI) of the Spanish Ministerio de Ciencia Innovación y Universidades (MICIU) and the European Regional Development Fund, FEDER and Severo Ochoa Programme (grants PID2021-122397NB-C21 and CEX2019-000920-S), the NextGeneration EU/PRTR and MIU (UNI/551/2021) trough grant Margarita Salas-UL, the CAPES-Br and FAPERJ/DSC-10 (SEI-260003/001630/2023), MCIN/AEI/10.13039/501100011033 by ‘ERDF A way of making Europe’ (grants PID2019-105552RB-C41 and PID2022-137779OB-C41, PID2021-125485NB-C22, CEX2019-000918-M) funded by MCIN/AEI/10.13039/501100011033 (State Agency for Research of the Spanish Ministry of Science and Innovation) and SGR-2021-01069 (AGAUR), the Spanish Government Ministerio de Ciencia e Innovación and Agencia Estatal de Investigación (10.13 039/501 100 011 033; grant PID2022-136 640 NB-C22), the Consejo Superior de Investigaciones Científicas (CSIC; grant 2022-AEP 005), the Polish National Agency for Academic Exchange (BEKKER fellowship BPN/BEK/2022/1/00106) and National Science Center (NCN, Poland; grant number OPUS 2021/41/B/ST9/00757), the ‘La Caixa’ Foundation (ID 100010434) under the fellowship code LCF/BQ/PI23/11970035, the Research foundation Flanders (FWO) PhD fellowship under project 11E1721N and senior postdoctoral fellowship under number 12ZY523N, and the Netherlands Research Council NWO (VIDI 203.061 grant).","oa_version":"Preprint","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"last_name":"Sana","first_name":"H.","full_name":"Sana, H."},{"full_name":"Shenar, T.","last_name":"Shenar","first_name":"T."},{"full_name":"Bodensteiner, J.","last_name":"Bodensteiner","first_name":"J."},{"full_name":"Britavskiy, N.","first_name":"N.","last_name":"Britavskiy"},{"full_name":"Langer, N.","last_name":"Langer","first_name":"N."},{"last_name":"Lennon","first_name":"D. J.","full_name":"Lennon, D. J."},{"last_name":"Mahy","first_name":"L.","full_name":"Mahy, L."},{"first_name":"I.","last_name":"Mandel","full_name":"Mandel, I."},{"full_name":"De Mink, S. E.","first_name":"S. E.","last_name":"De Mink"},{"full_name":"Patrick, L. R.","last_name":"Patrick","first_name":"L. R."},{"last_name":"Villaseñor","first_name":"J. I.","full_name":"Villaseñor, J. I."},{"first_name":"M.","last_name":"Dirickx","full_name":"Dirickx, M."},{"full_name":"Abdul-Masih, M.","first_name":"M.","last_name":"Abdul-Masih"},{"full_name":"Almeida, L. A.","last_name":"Almeida","first_name":"L. A."},{"last_name":"Backs","first_name":"F.","full_name":"Backs, F."},{"last_name":"Berlanas","first_name":"S. R.","full_name":"Berlanas, S. R."},{"full_name":"Bernini-Peron, M.","first_name":"M.","last_name":"Bernini-Peron"},{"full_name":"Bowman, D. M.","first_name":"D. M.","last_name":"Bowman"},{"full_name":"Bronner, V. A.","last_name":"Bronner","first_name":"V. A."},{"first_name":"P. A.","last_name":"Crowther","full_name":"Crowther, P. A."},{"last_name":"Deshmukh","first_name":"K.","full_name":"Deshmukh, K."},{"full_name":"Evans, C. J.","last_name":"Evans","first_name":"C. J."},{"last_name":"Fabry","first_name":"M.","full_name":"Fabry, M."},{"full_name":"Gieles, M.","first_name":"M.","last_name":"Gieles"},{"full_name":"Gilkis, A.","first_name":"A.","last_name":"Gilkis"},{"full_name":"González-Torà, G.","last_name":"González-Torà","first_name":"G."},{"last_name":"Gräfener","first_name":"G.","full_name":"Gräfener, G."},{"first_name":"Ylva Louise Linsdotter","last_name":"Götberg","orcid":"0000-0002-6960-6911","full_name":"Götberg, Ylva Louise Linsdotter","id":"d0648d0c-0f64-11ee-a2e0-dd0faa2e4f7d"},{"full_name":"Hawcroft, C.","first_name":"C.","last_name":"Hawcroft"},{"full_name":"Hénault-Brunet, V.","first_name":"V.","last_name":"Hénault-Brunet"},{"full_name":"Herrero, A.","last_name":"Herrero","first_name":"A."},{"last_name":"Holgado","first_name":"G.","full_name":"Holgado, G."},{"full_name":"Izzard, R. G.","last_name":"Izzard","first_name":"R. G."},{"first_name":"A.","last_name":"De Koter","full_name":"De Koter, A."},{"full_name":"Janssens, S.","last_name":"Janssens","first_name":"S."},{"full_name":"Johnston, C.","first_name":"C.","last_name":"Johnston"},{"full_name":"Josiek, J.","last_name":"Josiek","first_name":"J."},{"first_name":"S.","last_name":"Justham","full_name":"Justham, S."},{"full_name":"Kalari, V. M.","last_name":"Kalari","first_name":"V. M."},{"full_name":"Klencki, J.","first_name":"J.","last_name":"Klencki"},{"first_name":"J.","last_name":"Kubát","full_name":"Kubát, J."},{"full_name":"Kubátová, B.","last_name":"Kubátová","first_name":"B."},{"first_name":"R. R.","last_name":"Lefever","full_name":"Lefever, R. R."},{"last_name":"Van Loon","first_name":"J. Th","full_name":"Van Loon, J. Th"},{"full_name":"Ludwig, B.","last_name":"Ludwig","first_name":"B."},{"last_name":"Mackey","first_name":"J.","full_name":"Mackey, J."},{"last_name":"Maíz Apellániz","first_name":"J.","full_name":"Maíz Apellániz, J."},{"full_name":"Maravelias, G.","last_name":"Maravelias","first_name":"G."},{"full_name":"Marchant, P.","first_name":"P.","last_name":"Marchant"},{"first_name":"T.","last_name":"Mazeh","full_name":"Mazeh, T."},{"full_name":"Menon, A.","first_name":"A.","last_name":"Menon"},{"full_name":"Moe, M.","first_name":"M.","last_name":"Moe"},{"last_name":"Najarro","first_name":"F.","full_name":"Najarro, F."},{"first_name":"L. M.","last_name":"Oskinova","full_name":"Oskinova, L. M."},{"last_name":"Ovadia","first_name":"R.","full_name":"Ovadia, R."},{"first_name":"D.","last_name":"Pauli","full_name":"Pauli, D."},{"first_name":"M.","last_name":"Pawlak","full_name":"Pawlak, M."},{"full_name":"Ramachandran, V.","last_name":"Ramachandran","first_name":"V."},{"full_name":"Renzo, M.","last_name":"Renzo","first_name":"M."},{"full_name":"Rocha, D. F.","last_name":"Rocha","first_name":"D. F."},{"last_name":"Sander","first_name":"A. A.C.","full_name":"Sander, A. A.C."},{"full_name":"Schneider, F. R.N.","first_name":"F. R.N.","last_name":"Schneider"},{"full_name":"Schootemeijer, A.","first_name":"A.","last_name":"Schootemeijer"},{"last_name":"Schösser","first_name":"E. C.","full_name":"Schösser, E. C."},{"full_name":"Schürmann, C.","last_name":"Schürmann","first_name":"C."},{"last_name":"Sen","first_name":"K.","full_name":"Sen, K."},{"full_name":"Shahaf, S.","first_name":"S.","last_name":"Shahaf"},{"full_name":"Simón-Díaz, S.","first_name":"S.","last_name":"Simón-Díaz"},{"first_name":"L. A.C.","last_name":"Van Son","full_name":"Van Son, L. A.C."},{"last_name":"Stoop","first_name":"M.","full_name":"Stoop, M."},{"last_name":"Toonen","first_name":"S.","full_name":"Toonen, S."},{"full_name":"Tramper, F.","first_name":"F.","last_name":"Tramper"},{"last_name":"Valli","first_name":"R.","full_name":"Valli, R."},{"last_name":"Vigna-Gómez","first_name":"A.","full_name":"Vigna-Gómez, A."},{"last_name":"Vink","first_name":"J. S.","full_name":"Vink, J. S."},{"last_name":"Wang","first_name":"C.","full_name":"Wang, C."},{"first_name":"R.","last_name":"Willcox","full_name":"Willcox, R."}],"arxiv":1,"external_id":{"isi":["001568077900001"],"arxiv":["2509.12488"]},"isi":1,"OA_place":"repository","publication_identifier":{"eissn":["2397-3366"]},"intvolume":"         9","_id":"20352","date_published":"2025-09-02T00:00:00Z","quality_controlled":"1","page":"1337-1346","status":"public","month":"09","publisher":"Springer Nature","citation":{"ieee":"H. Sana <i>et al.</i>, “A high fraction of close massive binary stars at low metallicity,” <i>Nature Astronomy</i>, vol. 9. Springer Nature, pp. 1337–1346, 2025.","ama":"Sana H, Shenar T, Bodensteiner J, et al. A high fraction of close massive binary stars at low metallicity. <i>Nature Astronomy</i>. 2025;9:1337-1346. doi:<a href=\"https://doi.org/10.1038/s41550-025-02610-x\">10.1038/s41550-025-02610-x</a>","apa":"Sana, H., Shenar, T., Bodensteiner, J., Britavskiy, N., Langer, N., Lennon, D. J., … Willcox, R. (2025). A high fraction of close massive binary stars at low metallicity. <i>Nature Astronomy</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41550-025-02610-x\">https://doi.org/10.1038/s41550-025-02610-x</a>","ista":"Sana H, Shenar T, Bodensteiner J, Britavskiy N, Langer N, Lennon DJ, Mahy L, Mandel I, De Mink SE, Patrick LR, Villaseñor JI, Dirickx M, Abdul-Masih M, Almeida LA, Backs F, Berlanas SR, Bernini-Peron M, Bowman DM, Bronner VA, Crowther PA, Deshmukh K, Evans CJ, Fabry M, Gieles M, Gilkis A, González-Torà G, Gräfener G, Götberg YLL, Hawcroft C, Hénault-Brunet V, Herrero A, Holgado G, Izzard RG, De Koter A, Janssens S, Johnston C, Josiek J, Justham S, Kalari VM, Klencki J, Kubát J, Kubátová B, Lefever RR, Van Loon JT, Ludwig B, Mackey J, Maíz Apellániz J, Maravelias G, Marchant P, Mazeh T, Menon A, Moe M, Najarro F, Oskinova LM, Ovadia R, Pauli D, Pawlak M, Ramachandran V, Renzo M, Rocha DF, Sander AAC, Schneider FRN, Schootemeijer A, Schösser EC, Schürmann C, Sen K, Shahaf S, Simón-Díaz S, Van Son LAC, Stoop M, Toonen S, Tramper F, Valli R, Vigna-Gómez A, Vink JS, Wang C, Willcox R. 2025. A high fraction of close massive binary stars at low metallicity. Nature Astronomy. 9, 1337–1346.","mla":"Sana, H., et al. “A High Fraction of Close Massive Binary Stars at Low Metallicity.” <i>Nature Astronomy</i>, vol. 9, Springer Nature, 2025, pp. 1337–46, doi:<a href=\"https://doi.org/10.1038/s41550-025-02610-x\">10.1038/s41550-025-02610-x</a>.","short":"H. Sana, T. Shenar, J. Bodensteiner, N. Britavskiy, N. Langer, D.J. Lennon, L. Mahy, I. Mandel, S.E. De Mink, L.R. Patrick, J.I. Villaseñor, M. Dirickx, M. Abdul-Masih, L.A. Almeida, F. Backs, S.R. Berlanas, M. Bernini-Peron, D.M. Bowman, V.A. Bronner, P.A. Crowther, K. Deshmukh, C.J. Evans, M. Fabry, M. Gieles, A. Gilkis, G. González-Torà, G. Gräfener, Y.L.L. Götberg, C. Hawcroft, V. Hénault-Brunet, A. Herrero, G. Holgado, R.G. Izzard, A. De Koter, S. Janssens, C. Johnston, J. Josiek, S. Justham, V.M. Kalari, J. Klencki, J. Kubát, B. Kubátová, R.R. Lefever, J.T. Van Loon, B. Ludwig, J. Mackey, J. Maíz Apellániz, G. Maravelias, P. Marchant, T. Mazeh, A. Menon, M. Moe, F. Najarro, L.M. Oskinova, R. Ovadia, D. Pauli, M. Pawlak, V. Ramachandran, M. Renzo, D.F. Rocha, A.A.C. Sander, F.R.N. Schneider, A. Schootemeijer, E.C. Schösser, C. Schürmann, K. Sen, S. Shahaf, S. Simón-Díaz, L.A.C. Van Son, M. Stoop, S. Toonen, F. Tramper, R. Valli, A. Vigna-Gómez, J.S. Vink, C. Wang, R. Willcox, Nature Astronomy 9 (2025) 1337–1346.","chicago":"Sana, H., T. Shenar, J. Bodensteiner, N. Britavskiy, N. Langer, D. J. Lennon, L. Mahy, et al. “A High Fraction of Close Massive Binary Stars at Low Metallicity.” <i>Nature Astronomy</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1038/s41550-025-02610-x\">https://doi.org/10.1038/s41550-025-02610-x</a>."},"department":[{"_id":"YlGo"}],"date_created":"2025-09-14T22:01:32Z","abstract":[{"text":"At high metallicity, a majority of massive stars have at least one close stellar companion. The evolution of such binaries is subject to strong interaction processes, which heavily impact the characteristics of their life-ending supernova and compact remnants. For the low-metallicity environments of high-redshift galaxies, constraints on the multiplicity properties of massive stars over the separation range leading to binary interaction are crucially missing. Here we show that the presence of massive stars in close binaries is ubiquitous, even at low metallicity. Using the Very Large Telescope, we obtained multi-epoch radial velocity measurements of a representative sample of 139 massive O-type stars across the Small Magellanic Cloud, which has a metal content of about one-fifth of the solar value. We find that 45% of them show radial velocity variations that demonstrate that they are members of close binary systems, and predominantly have orbital periods shorter than 1 year. Correcting for observational biases indicates that at least 70+11−6 %  of the O stars in our sample are in close binaries, and that at least 68+7\r\n−8% of all O stars interact with a companion star during their lifetime. We found no evidence supporting a statistically significant trend of the multiplicity properties with metallicity. Our results indicate that multiplicity and binary interactions govern the evolution of massive stars and determine their cosmic feedback and explosive fates.","lang":"eng"}],"language":[{"iso":"eng"}],"volume":9,"title":"A high fraction of close massive binary stars at low metallicity","year":"2025","OA_type":"green","day":"02","oa":1,"publication_status":"published","doi":"10.1038/s41550-025-02610-x","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2509.12488"}],"scopus_import":"1","date_updated":"2025-12-30T10:27:05Z","publication":"Nature Astronomy","type":"journal_article","article_type":"original","article_processing_charge":"No"},{"page":"1863–1880","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"status":"public","month":"10","citation":{"mla":"Browning, Timothy D., et al. “Pairs of Commuting Integer Matrices.” <i>Mathematische Annalen</i>, vol. 393, Springer Nature, 2025, pp. 1863–1880, doi:<a href=\"https://doi.org/10.1007/s00208-025-03285-5\">10.1007/s00208-025-03285-5</a>.","short":"T.D. Browning, W. Sawin, V. Wang, Mathematische Annalen 393 (2025) 1863–1880.","ista":"Browning TD, Sawin W, Wang V. 2025. Pairs of commuting integer matrices. Mathematische Annalen. 393, 1863–1880.","chicago":"Browning, Timothy D, Will Sawin, and Victor Wang. “Pairs of Commuting Integer Matrices.” <i>Mathematische Annalen</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s00208-025-03285-5\">https://doi.org/10.1007/s00208-025-03285-5</a>.","apa":"Browning, T. D., Sawin, W., &#38; Wang, V. (2025). Pairs of commuting integer matrices. <i>Mathematische Annalen</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00208-025-03285-5\">https://doi.org/10.1007/s00208-025-03285-5</a>","ieee":"T. D. Browning, W. Sawin, and V. Wang, “Pairs of commuting integer matrices,” <i>Mathematische Annalen</i>, vol. 393. Springer Nature, pp. 1863–1880, 2025.","ama":"Browning TD, Sawin W, Wang V. Pairs of commuting integer matrices. <i>Mathematische Annalen</i>. 2025;393:1863–1880. doi:<a href=\"https://doi.org/10.1007/s00208-025-03285-5\">10.1007/s00208-025-03285-5</a>"},"publisher":"Springer Nature","department":[{"_id":"TiBr"}],"date_created":"2025-09-21T22:01:31Z","intvolume":"       393","publication_identifier":{"issn":["0025-5831"],"eissn":["1432-1807"]},"_id":"20367","date_published":"2025-10-01T00:00:00Z","project":[{"_id":"bd8a4fdc-d553-11ed-ba76-80a0167441a3","name":"Rational curves via function field analytic number theory","grant_number":"P36278"},{"grant_number":"101034413","name":"IST-BRIDGE: International postdoctoral program","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","call_identifier":"H2020"}],"quality_controlled":"1","oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"first_name":"Timothy D","last_name":"Browning","id":"35827D50-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8314-0177","full_name":"Browning, Timothy D"},{"first_name":"Will","last_name":"Sawin","full_name":"Sawin, Will"},{"first_name":"Victor","last_name":"Wang","id":"76096395-aea4-11ed-a680-ab8ebbd3f1b9","full_name":"Wang, Victor","orcid":"0000-0002-0704-7026"}],"external_id":{"isi":["001567740200001"],"arxiv":["2409.01920"]},"arxiv":1,"isi":1,"OA_place":"publisher","has_accepted_license":"1","acknowledgement":"The authors are very grateful to Alina Ostafe, Matthew Satriano and Igor Shparlinski for drawing their attention to this problem and for useful comments, and to Michael Larsen and Peter Sarnak for their helpful correspondence. We also thank the referee for their valuable input. While working on this paper the first author was supported by a FWF grant (DOI 10.55776/P36278), the second author by a Sloan Research Fellowship, and the third author by the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 101034413. Open access funding provided by Institute of Science and Technology (IST Austria).","file":[{"file_name":"2025_MathAnnalen_Browning.pdf","checksum":"1e94da1a67306e03c8e0086518faf4bc","file_size":337505,"success":1,"date_created":"2026-01-05T13:15:44Z","access_level":"open_access","relation":"main_file","creator":"dernst","content_type":"application/pdf","file_id":"20950","date_updated":"2026-01-05T13:15:44Z"}],"article_type":"original","article_processing_charge":"Yes (via OA deal)","ddc":["510"],"scopus_import":"1","PlanS_conform":"1","date_updated":"2026-01-05T13:15:53Z","type":"journal_article","publication":"Mathematische Annalen","publication_status":"published","doi":"10.1007/s00208-025-03285-5","ec_funded":1,"file_date_updated":"2026-01-05T13:15:44Z","corr_author":"1","abstract":[{"lang":"eng","text":"We prove upper and lower bounds on the number of pairs of commuting n x n matrices with integer entries in [-T, T], as T -> . Our work uses Fourier analysis and leads to an analysis of exponential sums involving matrices over finite fields. These are bounded by combining a stratification result of Fouvry and Katz with a new result about the flatness of the commutator Lie bracket."}],"language":[{"iso":"eng"}],"title":"Pairs of commuting integer matrices","volume":393,"year":"2025","OA_type":"hybrid","day":"01","oa":1},{"publication":"Science Advances","type":"journal_article","date_updated":"2026-02-16T11:45:54Z","PlanS_conform":"1","scopus_import":"1","ddc":["570"],"article_processing_charge":"Yes","article_type":"original","oa":1,"day":"19","OA_type":"gold","year":"2025","volume":11,"title":"Structure of the Huntingtin F-actin complex reveals its role in cytoskeleton organization","language":[{"iso":"eng"}],"article_number":"eadw4124","corr_author":"1","abstract":[{"lang":"eng","text":"The Huntingtin protein (HTT), named for its role in Huntington’s disease, has been best understood as a scaffolding protein that promotes vesicle transport by molecular motors along microtubules. Here, we show that HTT also interacts with the actin cytoskeleton, and its loss of function disturbs the morphology and function of the axonal growth cone. We demonstrate that HTT organizes F-actin into bundles. Cryo–electron tomography (cryo-ET) and subtomogram averaging (STA) structural analyses reveal that HTT’s N-terminal HEAT and Bridge domains wrap around F-actin, while the C-terminal HEAT domain is displaced; furthermore, HTT dimerizes via the N-HEAT domain to bridge parallel actin filaments separated by ~20 nanometers. Our study provides the structural basis for understanding how HTT interacts with and organizes the actin cytoskeleton."}],"file_date_updated":"2025-09-23T07:57:51Z","doi":"10.1126/sciadv.adw4124","publication_status":"published","quality_controlled":"1","project":[{"grant_number":"P33367","_id":"9B954C5C-BA93-11EA-9121-9846C619BF3A","name":"Structure and isoform diversity of the Arp2/3 complex"},{"grant_number":"E435","name":"In Situ Actin Structures via Hybrid Cryo-electron Microscopy","_id":"7bd318a1-9f16-11ee-852c-cc9217763180"},{"grant_number":"CZI01","_id":"62909c6f-2b32-11ec-9570-e1476aab5308","name":"CryoMinflux-guided in-situ molecular census and structure determination"},{"_id":"bd980d18-d553-11ed-ba76-ceaa645c97eb","name":"A molecular atlas of Actin filament IDentities in the cell motility machinery","grant_number":"101076260"}],"date_published":"2025-09-19T00:00:00Z","_id":"20370","intvolume":"        11","issue":"38","publication_identifier":{"issn":["2375-2548"]},"date_created":"2025-09-22T08:00:52Z","department":[{"_id":"FlSc"}],"publisher":"AAAS","citation":{"ieee":"R. Carpentier <i>et al.</i>, “Structure of the Huntingtin F-actin complex reveals its role in cytoskeleton organization,” <i>Science Advances</i>, vol. 11, no. 38. AAAS, 2025.","apa":"Carpentier, R., Kim, J., Capizzi, M., Kim, H., Fäßler, F., Hansen, J., … Humbert, S. (2025). Structure of the Huntingtin F-actin complex reveals its role in cytoskeleton organization. <i>Science Advances</i>. AAAS. <a href=\"https://doi.org/10.1126/sciadv.adw4124\">https://doi.org/10.1126/sciadv.adw4124</a>","ama":"Carpentier R, Kim J, Capizzi M, et al. Structure of the Huntingtin F-actin complex reveals its role in cytoskeleton organization. <i>Science Advances</i>. 2025;11(38). doi:<a href=\"https://doi.org/10.1126/sciadv.adw4124\">10.1126/sciadv.adw4124</a>","chicago":"Carpentier, Rémi, Jaesung Kim, Mariacristina Capizzi, Hyeongju Kim, Florian Fäßler, Jesse Hansen, Min Jeong Kim, et al. “Structure of the Huntingtin F-Actin Complex Reveals Its Role in Cytoskeleton Organization.” <i>Science Advances</i>. AAAS, 2025. <a href=\"https://doi.org/10.1126/sciadv.adw4124\">https://doi.org/10.1126/sciadv.adw4124</a>.","short":"R. Carpentier, J. Kim, M. Capizzi, H. Kim, F. Fäßler, J. Hansen, M.J. Kim, E. Denarier, B. Blot, M. Degennaro, S. Labou, I. Arnal, M.J. Marcaida, M.D. Peraro, D. Kim, F.K. Schur, J.-J. Song, S. Humbert, Science Advances 11 (2025).","mla":"Carpentier, Rémi, et al. “Structure of the Huntingtin F-Actin Complex Reveals Its Role in Cytoskeleton Organization.” <i>Science Advances</i>, vol. 11, no. 38, eadw4124, AAAS, 2025, doi:<a href=\"https://doi.org/10.1126/sciadv.adw4124\">10.1126/sciadv.adw4124</a>.","ista":"Carpentier R, Kim J, Capizzi M, Kim H, Fäßler F, Hansen J, Kim MJ, Denarier E, Blot B, Degennaro M, Labou S, Arnal I, Marcaida MJ, Peraro MD, Kim D, Schur FK, Song J-J, Humbert S. 2025. Structure of the Huntingtin F-actin complex reveals its role in cytoskeleton organization. Science Advances. 11(38), eadw4124."},"month":"09","status":"public","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"file":[{"date_updated":"2025-09-23T07:57:51Z","file_id":"20372","creator":"dernst","content_type":"application/pdf","date_created":"2025-09-23T07:57:51Z","access_level":"open_access","relation":"main_file","file_name":"2025_ScienceAdvance_Carpentier.pdf","checksum":"4e2407bdabf8d53f399eb8a20d86218e","success":1,"file_size":3599137}],"acknowledgement":"We thank C. Cuveillier, J. Delaroche, T. Ferraro, and A. Zanchi for help with TIRF experiments, electron microscopy preparation, data analysis, and cell cultures, respectively; A. Antkowiak, C. Bosc, C. Fassier, A. Fourest-Lieuvin, and V. Brandt for helpful discussions. We acknowledge the contribution of the Photonic Imaging Center of Grenoble Institute Neuroscience which is part of the ISdV core facility and certified by the IBiSA label and ICM.Quant (RRID:SCR_026393) core facility of the Paris Brain Institute (ICM); the AniRA lentivector production facility from the CELPHEDIA Infrastructure and SFR Biosciences (UAR3444/CNRS, US8/Inserm, ENS de Lyon, UCBL); the Scientific Service Units (SSUs) of ISTA through resources provided by Scientific Computing (SciComp, A. Schloegl and S. Elefante); and the Electron Microscopy Facility (EMF, V.V. Hodirnau). The software programs used for the processing were supported by SBGrid (www.sbgrid.org). This work was supported by the Agence Nationale pour la Recherche (AXYON: ANR-18-CE16-0009-01, S.H.), Austrian Science Fund (FWF) grants (P33367, F.K.M.S.; E435, J.M.H.), ChanZuckerberg Initiative (CZI) grant (DAF2021-234754, F.K.M.S.), Hereditary Disease Foundation Research Grant (HDF 990846, M.C.), European Union (ERC: ActinID 101076260, F.K.M.S.), Fondation pour la Recherche Médicale (FRM: équipe labellisée DEQ202203014675, S.H.; PhD fellowship, FDT202001010865, R.C.), Korea Health Industry Development Institute (KHIDI) (Korea-Switzerland global research support grant: RS-2023-00266300, J.-J.S.), National Research Foundation (NRF) of Korea (Korea-Austria collaborative grant NRF-2019K1A3A1A181160, J.-J.S. and F.K.M.S.; NRF-2020R1A2B5B03001517 and RS-2024-00333346 and RS-2024-00436173, J.-J.S.; 2021R1C1C1006700, D.K.).","has_accepted_license":"1","isi":1,"OA_place":"publisher","DOAJ_listed":"1","external_id":{"pmid":["40971423"],"isi":["001575751700013"]},"pmid":1,"author":[{"full_name":"Carpentier, Rémi","last_name":"Carpentier","first_name":"Rémi"},{"first_name":"Jaesung","last_name":"Kim","full_name":"Kim, Jaesung"},{"full_name":"Capizzi, Mariacristina","first_name":"Mariacristina","last_name":"Capizzi"},{"full_name":"Kim, Hyeongju","first_name":"Hyeongju","last_name":"Kim"},{"last_name":"Fäßler","first_name":"Florian","full_name":"Fäßler, Florian","orcid":"0000-0001-7149-769X","id":"404F5528-F248-11E8-B48F-1D18A9856A87"},{"orcid":"0000-0001-7967-2085","full_name":"Hansen, Jesse","id":"1063c618-6f9b-11ec-9123-f912fccded63","last_name":"Hansen","first_name":"Jesse"},{"first_name":"Min Jeong","last_name":"Kim","full_name":"Kim, Min Jeong"},{"first_name":"Eric","last_name":"Denarier","full_name":"Denarier, Eric"},{"full_name":"Blot, Béatrice","first_name":"Béatrice","last_name":"Blot"},{"last_name":"Degennaro","first_name":"Marine","full_name":"Degennaro, Marine"},{"last_name":"Labou","first_name":"Sophia","full_name":"Labou, Sophia"},{"first_name":"Isabelle","last_name":"Arnal","full_name":"Arnal, Isabelle"},{"last_name":"Marcaida","first_name":"Maria J.","full_name":"Marcaida, Maria J."},{"first_name":"Matteo Dal","last_name":"Peraro","full_name":"Peraro, Matteo Dal"},{"last_name":"Kim","first_name":"Doory","full_name":"Kim, Doory"},{"orcid":"0000-0003-4790-8078","id":"48AD8942-F248-11E8-B48F-1D18A9856A87","full_name":"Schur, Florian KM","last_name":"Schur","first_name":"Florian KM"},{"full_name":"Song, Ji-Joon","last_name":"Song","first_name":"Ji-Joon"},{"first_name":"Sandrine","last_name":"Humbert","full_name":"Humbert, Sandrine"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version"},{"article_processing_charge":"Yes (in subscription journal)","article_type":"original","ddc":["570"],"scopus_import":"1","PlanS_conform":"1","date_updated":"2025-09-24T08:21:55Z","type":"journal_article","publication":"Molecular Cell","doi":"10.1016/j.molcel.2025.06.027","publication_status":"published","file_date_updated":"2025-09-24T07:54:03Z","language":[{"iso":"eng"}],"abstract":[{"text":"Pioneer transcription factors (TFs) engage chromatinized DNA motifs. However, it is unclear how the resultant TF-nucleosome complexes are decoded by co-factors. In humans, the TF p53 regulates cell-cycle progression, apoptosis, and the DNA damage response, with a large fraction of p53-bound sites residing in nucleosome-harboring inaccessible chromatin. We examined the interaction of chromatin-bound p53 with co-factors belonging to the ubiquitin proteasome system (UPS). At two distinct motif locations on the nucleosome (super-helical location [SHL]−5.7 and SHL+5.9), the E3 ubiquitin ligase E6-E6AP was unable to bind nucleosome-engaged p53. The deubiquitinase USP7, on the other hand, readily engages nucleosome-bound p53 in vitro and in cells. A corresponding cryo-electron microscopy (cryo-EM) structure shows USP7 engaged with p53 and nucleosomes. Our work illustrates how chromatin imposes a co-factor-selective barrier for p53 interactors, whereby flexibly tethered interaction domains of co-factors and TFs govern compatibility between co-factors, TFs, and chromatin.","lang":"eng"}],"day":"07","OA_type":"hybrid","oa":1,"volume":85,"title":"Nucleosomes specify co-factor access to p53","year":"2025","status":"public","month":"08","page":"2919-2936.e12","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"date_created":"2025-09-23T08:56:13Z","department":[{"_id":"AlMi"}],"publisher":"Elsevier","citation":{"ieee":"D. Chakraborty <i>et al.</i>, “Nucleosomes specify co-factor access to p53,” <i>Molecular Cell</i>, vol. 85, no. 15. Elsevier, p. 2919–2936.e12, 2025.","ama":"Chakraborty D, Sandate CR, Isbel L, et al. Nucleosomes specify co-factor access to p53. <i>Molecular Cell</i>. 2025;85(15):2919-2936.e12. doi:<a href=\"https://doi.org/10.1016/j.molcel.2025.06.027\">10.1016/j.molcel.2025.06.027</a>","apa":"Chakraborty, D., Sandate, C. R., Isbel, L., Kempf, G., Weiss, J., Cavadini, S., … Thomä, N. H. (2025). Nucleosomes specify co-factor access to p53. <i>Molecular Cell</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.molcel.2025.06.027\">https://doi.org/10.1016/j.molcel.2025.06.027</a>","chicago":"Chakraborty, Deyasini, Colby R. Sandate, Luke Isbel, Georg Kempf, Joscha Weiss, Simone Cavadini, Lukas Kater, et al. “Nucleosomes Specify Co-Factor Access to P53.” <i>Molecular Cell</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.molcel.2025.06.027\">https://doi.org/10.1016/j.molcel.2025.06.027</a>.","short":"D. Chakraborty, C.R. Sandate, L. Isbel, G. Kempf, J. Weiss, S. Cavadini, L. Kater, J. Seebacher, Z. Kozicka, L. Stoos, R.S. Grand, D. Schübeler, A.K. Michael, N.H. Thomä, Molecular Cell 85 (2025) 2919–2936.e12.","mla":"Chakraborty, Deyasini, et al. “Nucleosomes Specify Co-Factor Access to P53.” <i>Molecular Cell</i>, vol. 85, no. 15, Elsevier, 2025, p. 2919–2936.e12, doi:<a href=\"https://doi.org/10.1016/j.molcel.2025.06.027\">10.1016/j.molcel.2025.06.027</a>.","ista":"Chakraborty D, Sandate CR, Isbel L, Kempf G, Weiss J, Cavadini S, Kater L, Seebacher J, Kozicka Z, Stoos L, Grand RS, Schübeler D, Michael AK, Thomä NH. 2025. Nucleosomes specify co-factor access to p53. Molecular Cell. 85(15), 2919–2936.e12."},"publication_identifier":{"issn":["1097-2765"]},"intvolume":"        85","issue":"15","_id":"20374","quality_controlled":"1","date_published":"2025-08-07T00:00:00Z","oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","OA_place":"publisher","author":[{"last_name":"Chakraborty","first_name":"Deyasini","full_name":"Chakraborty, Deyasini"},{"first_name":"Colby R.","last_name":"Sandate","full_name":"Sandate, Colby R."},{"last_name":"Isbel","first_name":"Luke","full_name":"Isbel, Luke"},{"first_name":"Georg","last_name":"Kempf","full_name":"Kempf, Georg"},{"first_name":"Joscha","last_name":"Weiss","full_name":"Weiss, Joscha"},{"last_name":"Cavadini","first_name":"Simone","full_name":"Cavadini, Simone"},{"last_name":"Kater","first_name":"Lukas","full_name":"Kater, Lukas"},{"first_name":"Jan","last_name":"Seebacher","full_name":"Seebacher, Jan"},{"last_name":"Kozicka","first_name":"Zuzanna","full_name":"Kozicka, Zuzanna"},{"first_name":"Lisa","last_name":"Stoos","full_name":"Stoos, Lisa"},{"last_name":"Grand","first_name":"Ralph S.","full_name":"Grand, Ralph S."},{"full_name":"Schübeler, Dirk","last_name":"Schübeler","first_name":"Dirk"},{"first_name":"Alicia","last_name":"Michael","id":"6437c950-2a03-11ee-914d-d6476dd7b75c","full_name":"Michael, Alicia","orcid":"0000-0002-6080-839X"},{"full_name":"Thomä, Nicolas H.","last_name":"Thomä","first_name":"Nicolas H."}],"has_accepted_license":"1","acknowledgement":"We thank M. Schütz for laboratory management, organization, and assistance with manuscript editing. We are grateful to all Thomä and Schübeler lab members. We thank Ulrich Hassiepen from Novartis for his support and insightful discussions on the kinetic analysis. This work was supported by funding from the European Research Council (ERC), under the European Union’s H2020 research program (NucEM, grant no. 884331); the Swiss National Science Foundation (SNF, grant no. 310030_301206 and 310030_214852); Krebsforschung (KFS, grant no. KFS-5933-08-2023); Novartis Research Foundation (to N.H.T.); the Novartis Freenovation (grant no. FN23-0000000514 to C.R.S.); the National Health and Medical Research Council CJ Martin Fellowship (APP1148380); the EU Horizon 2020 Research and Innovation Program under the Marie Sklodowska-Curie grant (grant no. 748760); the South Australian immunoGENomics Cancer Institute grant funding from the Australian Government; and the Sylvia and Charles Viertel Charitable Foundation Senior Medical Research Fellowship (to L.I.).","file":[{"date_updated":"2025-09-24T07:54:03Z","file_id":"20386","content_type":"application/pdf","creator":"dernst","access_level":"open_access","relation":"main_file","date_created":"2025-09-24T07:54:03Z","file_name":"2025_MolecularCell_Chakraborty.pdf","file_size":41813494,"checksum":"e60390ca629b350af3221d4718ca6534","success":1}]},{"publisher":"Springer Nature","citation":{"chicago":"Vasudevan, Mukund, Chaitanya S Paranjape, Michael Philip Sitte, Gökhan Yalniz, and Björn Hof. “Aging and Memory of Transitional Turbulence.” <i>Nature Communications</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1038/s41467-025-63044-7\">https://doi.org/10.1038/s41467-025-63044-7</a>.","short":"M. Vasudevan, C.S. Paranjape, M.P. Sitte, G. Yalniz, B. Hof, Nature Communications 16 (2025).","mla":"Vasudevan, Mukund, et al. “Aging and Memory of Transitional Turbulence.” <i>Nature Communications</i>, vol. 16, 8447, Springer Nature, 2025, doi:<a href=\"https://doi.org/10.1038/s41467-025-63044-7\">10.1038/s41467-025-63044-7</a>.","ista":"Vasudevan M, Paranjape CS, Sitte MP, Yalniz G, Hof B. 2025. Aging and memory of transitional turbulence. Nature Communications. 16, 8447.","ama":"Vasudevan M, Paranjape CS, Sitte MP, Yalniz G, Hof B. Aging and memory of transitional turbulence. <i>Nature Communications</i>. 2025;16. doi:<a href=\"https://doi.org/10.1038/s41467-025-63044-7\">10.1038/s41467-025-63044-7</a>","apa":"Vasudevan, M., Paranjape, C. S., Sitte, M. P., Yalniz, G., &#38; Hof, B. (2025). Aging and memory of transitional turbulence. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-025-63044-7\">https://doi.org/10.1038/s41467-025-63044-7</a>","ieee":"M. Vasudevan, C. S. Paranjape, M. P. Sitte, G. Yalniz, and B. Hof, “Aging and memory of transitional turbulence,” <i>Nature Communications</i>, vol. 16. Springer Nature, 2025."},"department":[{"_id":"BjHo"}],"date_created":"2025-09-27T13:27:31Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"month":"09","status":"public","date_published":"2025-09-26T00:00:00Z","quality_controlled":"1","project":[{"name":"Revisiting the Turbulence Problem Using Statistical Mechanics","_id":"238598C6-32DE-11EA-91FC-C7463DDC885E","grant_number":"662960"}],"_id":"20402","publication_identifier":{"eissn":["2041-1723"]},"intvolume":"        16","arxiv":1,"DOAJ_listed":"1","external_id":{"arxiv":["2112.06537"],"isi":["001582555200041"]},"author":[{"full_name":"Vasudevan, Mukund","id":"3C5A959A-F248-11E8-B48F-1D18A9856A87","last_name":"Vasudevan","first_name":"Mukund"},{"id":"3D85B7C4-F248-11E8-B48F-1D18A9856A87","full_name":"Paranjape, Chaitanya S","first_name":"Chaitanya S","last_name":"Paranjape"},{"full_name":"Sitte, Michael Philip","id":"0ba0f1f2-9cfe-11f0-bee6-f95318d225b0","last_name":"Sitte","first_name":"Michael Philip"},{"full_name":"Yalniz, Gökhan","id":"66E74FA2-D8BF-11E9-8249-8DE2E5697425","orcid":"0000-0002-8490-9312","last_name":"Yalniz","first_name":"Gökhan"},{"id":"3A374330-F248-11E8-B48F-1D18A9856A87","full_name":"Hof, Björn","orcid":"0000-0003-2057-2754","first_name":"Björn","last_name":"Hof"}],"isi":1,"OA_place":"publisher","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","file":[{"content_type":"application/pdf","creator":"gyalniz","file_id":"20403","date_updated":"2025-09-27T13:32:03Z","file_size":2226082,"checksum":"945926ead9cde464435d456427e2869e","file_name":"s41467-025-63044-7.pdf","relation":"main_file","access_level":"open_access","date_created":"2025-09-27T13:32:03Z"}],"has_accepted_license":"1","acknowledgement":"This work was supported by a grant from the Simons Foundation (662960, BH). We thank Yohann Duguet for helpful discussions, Baofang Song for the initial adaptation of openpipeflow57 to the channel geometry, and Ashley P. Willis for openpipeflow57.","article_type":"original","article_processing_charge":"Yes","publication":"Nature Communications","type":"journal_article","date_updated":"2025-12-01T12:40:27Z","PlanS_conform":"1","scopus_import":"1","ddc":["532"],"file_date_updated":"2025-09-27T13:32:03Z","publication_status":"published","doi":"10.1038/s41467-025-63044-7","year":"2025","title":"Aging and memory of transitional turbulence","volume":16,"oa":1,"OA_type":"gold","day":"26","abstract":[{"lang":"eng","text":"The recent classification of the onset of turbulence as a directed percolation (DP) phase transition has been applied to all major shear flows including pipe, channel, Couette and boundary layer flows. A cornerstone of the DP analogy is the memoryless (Poisson) property of turbulent sites. We here show that, for the classic case of channel flow, neither the decay nor the proliferation of turbulent stripes is memoryless. As demonstrated by a standard analysis of the respective survival curves, isolated channel stripes, in the immediate vicinity of the critical point, age. Consequently, the one to one mapping between turbulent stripes and active DP-sites is not fulfilled in this low Reynolds number regime. In addition, the interpretation of turbulence as a chaotic saddle with supertransient properties, the basis of recent theoretical progress, does not apply to individual localized stripes. The discrepancy between channel flow and the transition models established for pipe and Couette flow, illustrates that seemingly minor geometrical differences between flows can give rise to instabilities and growth mechanisms that fundamentally alter the nature of the transition to turbulence."}],"corr_author":"1","language":[{"iso":"eng"}],"article_number":"8447"},{"article_type":"original","article_processing_charge":"Yes (in subscription journal)","ddc":["570"],"scopus_import":"1","PlanS_conform":"1","date_updated":"2026-01-05T13:09:08Z","publication":"Matrix Biology","type":"journal_article","publication_status":"published","doi":"10.1016/j.matbio.2025.09.002","file_date_updated":"2026-01-05T13:09:01Z","abstract":[{"text":"Collagens are fundamental components of extracellular matrices, requiring precise intracellular post-translational modifications for proper function. Among the modifications, prolyl 4-hydroxylation is critical to stabilise the collagen triple helix. In humans, this reaction is mediated by collagen prolyl 4-hydroxylases (P4Hs). While humans possess three genes encoding these enzymes (P4H⍺s), Drosophila melanogaster harbour at least 26 candidates for collagen P4H⍺s despite its simple genome, and it is poorly understood which of them are actually working on collagen in the fly. In this study, we addressed this question by carrying out thorough bioinformatic and biochemical analyses. We demonstrate that among the 26 potential collagen P4H⍺s, PH4⍺EFB shares the highest homology with vertebrate collagen P4H⍺s. Furthermore, while collagen P4Hs and their substrates must exist in the same cells, our transcriptomic analyses at the tissue and single cell levels showed a global co-expression of PH4⍺EFB but not the other P4H⍺-related genes with the collagen IV genes. Moreover, expression of PH4⍺EFB during embryogenesis was found to precede that of collagen IV, presumably enabling efficient collagen modification by PH4⍺EFB. Finally, biochemical assays confirm that PH4⍺EFB binds collagen, supporting its direct role in collagen IV modification. Collectively, we identify PH4⍺EFB as the primary and potentially constitutive prolyl 4-hydroxylase responsible for collagen IV biosynthesis in Drosophila. Our findings highlight the remarkably simple nature of Drosophila collagen IV biosynthesis, which may serve as a blueprint for defining the minimal requirements for collagen engineering.","lang":"eng"}],"language":[{"iso":"eng"}],"title":"Evidence for the major role of PH4⍺EFB in the prolyl 4-hydroxylation of Drosophila collagen IV","volume":141,"year":"2025","OA_type":"hybrid","day":"01","oa":1,"page":"101-113","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"status":"public","month":"11","publisher":"Springer Nature","citation":{"apa":"Ishikawa, Y., Toups, M. A., Elkrewi, M. N., Zajac, A. L., Horne-Badovinac, S., &#38; Matsubayashi, Y. (2025). Evidence for the major role of PH4⍺EFB in the prolyl 4-hydroxylation of Drosophila collagen IV. <i>Matrix Biology</i>. Springer Nature. <a href=\"https://doi.org/10.1016/j.matbio.2025.09.002\">https://doi.org/10.1016/j.matbio.2025.09.002</a>","ama":"Ishikawa Y, Toups MA, Elkrewi MN, Zajac AL, Horne-Badovinac S, Matsubayashi Y. Evidence for the major role of PH4⍺EFB in the prolyl 4-hydroxylation of Drosophila collagen IV. <i>Matrix Biology</i>. 2025;141(11):101-113. doi:<a href=\"https://doi.org/10.1016/j.matbio.2025.09.002\">10.1016/j.matbio.2025.09.002</a>","ieee":"Y. Ishikawa, M. A. Toups, M. N. Elkrewi, A. L. Zajac, S. Horne-Badovinac, and Y. Matsubayashi, “Evidence for the major role of PH4⍺EFB in the prolyl 4-hydroxylation of Drosophila collagen IV,” <i>Matrix Biology</i>, vol. 141, no. 11. Springer Nature, pp. 101–113, 2025.","mla":"Ishikawa, Yoshihiro, et al. “Evidence for the Major Role of PH4⍺EFB in the Prolyl 4-Hydroxylation of Drosophila Collagen IV.” <i>Matrix Biology</i>, vol. 141, no. 11, Springer Nature, 2025, pp. 101–13, doi:<a href=\"https://doi.org/10.1016/j.matbio.2025.09.002\">10.1016/j.matbio.2025.09.002</a>.","short":"Y. Ishikawa, M.A. Toups, M.N. Elkrewi, A.L. Zajac, S. Horne-Badovinac, Y. Matsubayashi, Matrix Biology 141 (2025) 101–113.","ista":"Ishikawa Y, Toups MA, Elkrewi MN, Zajac AL, Horne-Badovinac S, Matsubayashi Y. 2025. Evidence for the major role of PH4⍺EFB in the prolyl 4-hydroxylation of Drosophila collagen IV. Matrix Biology. 141(11), 101–113.","chicago":"Ishikawa, Yoshihiro, Melissa A Toups, Marwan N Elkrewi, Allison L. Zajac, Sally Horne-Badovinac, and Yutaka Matsubayashi. “Evidence for the Major Role of PH4⍺EFB in the Prolyl 4-Hydroxylation of Drosophila Collagen IV.” <i>Matrix Biology</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1016/j.matbio.2025.09.002\">https://doi.org/10.1016/j.matbio.2025.09.002</a>."},"date_created":"2025-09-28T22:01:26Z","department":[{"_id":"BeVi"}],"intvolume":"       141","issue":"11","publication_identifier":{"issn":["0945-053X"],"eissn":["1569-1802"]},"_id":"20404","date_published":"2025-11-01T00:00:00Z","quality_controlled":"1","project":[{"name":"The highjacking of meiosis for asexual reproduction","_id":"34ae1506-11ca-11ed-8bc3-c14f4c474396","grant_number":"F8810"}],"oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","pmid":1,"author":[{"full_name":"Ishikawa, Yoshihiro","last_name":"Ishikawa","first_name":"Yoshihiro"},{"first_name":"Melissa A","last_name":"Toups","orcid":"0000-0002-9752-7380","id":"4E099E4E-F248-11E8-B48F-1D18A9856A87","full_name":"Toups, Melissa A"},{"last_name":"Elkrewi","first_name":"Marwan N","full_name":"Elkrewi, Marwan N","id":"0B46FACA-A8E1-11E9-9BD3-79D1E5697425","orcid":"0000-0002-5328-7231"},{"full_name":"Zajac, Allison L.","first_name":"Allison L.","last_name":"Zajac"},{"last_name":"Horne-Badovinac","first_name":"Sally","full_name":"Horne-Badovinac, Sally"},{"first_name":"Yutaka","last_name":"Matsubayashi","full_name":"Matsubayashi, Yutaka"}],"external_id":{"isi":["001583892100002"],"pmid":["40946811"]},"isi":1,"OA_place":"publisher","has_accepted_license":"1","acknowledgement":"This project was supported by the All May See Foundation 7031,182 to YI, the Louisiana Board of Regents Support Fund: Research Competitiveness Subprogram to MAT, Austrian science fund (FWF) as part of the SFB Meiosis consortium FWF SFB F88-10 to Beatriz Vicoso (supported ME), American Heart Association 16POST2726018 and American Cancer Society 132,123-PF-18–025–01-CSM postdoctoral fellowships to ALZ, National Institutes of Health R01 GM136961 and R35 GM148485 to SH-B, and the Academy of Medical Sciences/the Wellcome Trust/ the Government Department of Business, Energy and Industrial Strategy/the British Heart Foundation/Diabetes UK Springboard Award SBF008\\1115 to YM. \r\nComputational analyses of single-nucleus transcriptome data were performed on the high performance computer (HPC) at Bournemouth University, the HPC at Institute of Science and Technology Austria, and the high-performance computational resources provided by the Louisiana Optical Network Infrastructure (http://www.loni.org). The authors are grateful to the researchers who published the transcriptome datasets [48,49,52,55] that became the essential bases for this study, to FlyBase for curating the datasets in an easily accessible format, and the Drosophila Genomics Resource Center (DGRC), supported by NIH grant 2P40OD010949, for providing the D17 cell line used in this research. The authors thank Kristian Koski (University of Oulu, Finland) for crucial advice on the domain structure of collagen P4H⍺s, and Ryusuke Niwa and Ryo Hoshino (University of Tsukuba, Japan) for helpful discussions on SP.","file":[{"file_id":"20948","date_updated":"2026-01-05T13:09:01Z","content_type":"application/pdf","creator":"dernst","access_level":"open_access","relation":"main_file","date_created":"2026-01-05T13:09:01Z","file_name":"2025_MatrixBiology_Ishikawa.pdf","checksum":"764257db41865d19daec1935788f72d7","file_size":5844254,"success":1}]},{"publisher":"American Chemical Society","citation":{"short":"D. Lorenc, A. Volosniev, A.A. Zhumekenov, S. Lee, M. Ibáñez, O.M. Bakr, M. Lemeshko, Z. Alpichshev, ACS Photonics 12 (2025) 5220–5230.","mla":"Lorenc, Dusan, et al. “Observation of Analogue Dynamic Schwinger Effect and Non-Perturbative Light Sensing in Lead Halide Perovskites.” <i>ACS Photonics</i>, vol. 12, no. 9, American Chemical Society, 2025, pp. 5220–30, doi:<a href=\"https://doi.org/10.1021/acsphotonics.5c01360\">10.1021/acsphotonics.5c01360</a>.","ista":"Lorenc D, Volosniev A, Zhumekenov AA, Lee S, Ibáñez M, Bakr OM, Lemeshko M, Alpichshev Z. 2025. Observation of analogue dynamic Schwinger effect and non-perturbative light sensing in lead halide perovskites. ACS Photonics. 12(9), 5220–5230.","chicago":"Lorenc, Dusan, Artem Volosniev, Ayan A. Zhumekenov, Seungho Lee, Maria Ibáñez, Osman M. Bakr, Mikhail Lemeshko, and Zhanybek Alpichshev. “Observation of Analogue Dynamic Schwinger Effect and Non-Perturbative Light Sensing in Lead Halide Perovskites.” <i>ACS Photonics</i>. American Chemical Society, 2025. <a href=\"https://doi.org/10.1021/acsphotonics.5c01360\">https://doi.org/10.1021/acsphotonics.5c01360</a>.","ama":"Lorenc D, Volosniev A, Zhumekenov AA, et al. Observation of analogue dynamic Schwinger effect and non-perturbative light sensing in lead halide perovskites. <i>ACS Photonics</i>. 2025;12(9):5220-5230. doi:<a href=\"https://doi.org/10.1021/acsphotonics.5c01360\">10.1021/acsphotonics.5c01360</a>","ieee":"D. Lorenc <i>et al.</i>, “Observation of analogue dynamic Schwinger effect and non-perturbative light sensing in lead halide perovskites,” <i>ACS Photonics</i>, vol. 12, no. 9. American Chemical Society, pp. 5220–5230, 2025.","apa":"Lorenc, D., Volosniev, A., Zhumekenov, A. A., Lee, S., Ibáñez, M., Bakr, O. M., … Alpichshev, Z. (2025). Observation of analogue dynamic Schwinger effect and non-perturbative light sensing in lead halide perovskites. <i>ACS Photonics</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acsphotonics.5c01360\">https://doi.org/10.1021/acsphotonics.5c01360</a>"},"department":[{"_id":"MaIb"},{"_id":"MiLe"},{"_id":"ZhAl"}],"date_created":"2025-09-28T22:01:26Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"page":"5220-5230","month":"08","status":"public","date_published":"2025-08-11T00:00:00Z","quality_controlled":"1","project":[{"_id":"9B8F7476-BA93-11EA-9121-9846C619BF3A","name":"HighTE: The Werner Siemens Laboratory for the High Throughput Discovery of Semiconductors for Waste Heat Recovery"}],"_id":"20405","publication_identifier":{"eissn":["2330-4022"]},"intvolume":"        12","issue":"9","arxiv":1,"external_id":{"arxiv":["2406.05032"],"isi":["001547359300001"]},"author":[{"full_name":"Lorenc, Dusan","id":"40D8A3E6-F248-11E8-B48F-1D18A9856A87","last_name":"Lorenc","first_name":"Dusan"},{"last_name":"Volosniev","first_name":"Artem","orcid":"0000-0003-0393-5525","id":"37D278BC-F248-11E8-B48F-1D18A9856A87","full_name":"Volosniev, Artem"},{"full_name":"Zhumekenov, Ayan A.","first_name":"Ayan A.","last_name":"Zhumekenov"},{"orcid":"0000-0002-6962-8598","id":"BB243B88-D767-11E9-B658-BC13E6697425","full_name":"Lee, Seungho","last_name":"Lee","first_name":"Seungho"},{"id":"43C61214-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5013-2843","full_name":"Ibáñez, Maria","first_name":"Maria","last_name":"Ibáñez"},{"first_name":"Osman M.","last_name":"Bakr","full_name":"Bakr, Osman M."},{"first_name":"Mikhail","last_name":"Lemeshko","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","full_name":"Lemeshko, Mikhail","orcid":"0000-0002-6990-7802"},{"orcid":"0000-0002-7183-5203","id":"45E67A2A-F248-11E8-B48F-1D18A9856A87","full_name":"Alpichshev, Zhanybek","last_name":"Alpichshev","first_name":"Zhanybek"}],"OA_place":"publisher","isi":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","file":[{"success":1,"file_size":6609950,"checksum":"d42476279287a9a2f8aeafaef032f4a7","file_name":"2025_ACSPhotonics_Lorenc.pdf","date_created":"2025-10-20T11:02:21Z","relation":"main_file","access_level":"open_access","creator":"dernst","content_type":"application/pdf","date_updated":"2025-10-20T11:02:21Z","file_id":"20502"}],"acknowledgement":"A.G.V. thanks Peter Balling for useful discussions. This research was supported by the Scientific Service Units (SSU) of ISTA through resources provided by the Electron Microscopy Facility (EMF), and by the Werner Siemens Foundation (WSS) for financial support.","has_accepted_license":"1","article_type":"original","article_processing_charge":"Yes (via OA deal)","publication":"ACS Photonics","type":"journal_article","PlanS_conform":"1","date_updated":"2025-12-01T12:59:51Z","scopus_import":"1","ddc":["540","530"],"file_date_updated":"2025-10-20T11:02:21Z","publication_status":"published","doi":"10.1021/acsphotonics.5c01360","year":"2025","volume":12,"title":"Observation of analogue dynamic Schwinger effect and non-perturbative light sensing in lead halide perovskites","oa":1,"OA_type":"hybrid","day":"11","abstract":[{"lang":"eng","text":"Dielectric breakdown of physical vacuum (Schwinger effect) is the textbook demonstration of compatibility of Relativity and Quantum theory. Although observing this effect is still practically unachievable, its analogue generalizations have been shown to be more readily attainable. This paper demonstrates that a gapped Dirac semiconductor, methylammonium lead-bromide perovskite (MAPbBr3), exhibits analogue dynamic Schwinger effect. Tunneling ionization under deep subgap mid-infrared irradiation leads to intense photoluminescence in the visible range, in full agreement with quasi-adiabatic theory. In addition to revealing a gapped extended system suitable for studying the analogue Schwinger effect, this observation holds great potential for nonperturbative field sensing, i.e., sensing electric fields through nonperturbative light-matter interactions. First, this paper illustrates this by measuring the local deviation from the nominally cubic phase of a perovskite single crystal, which can be interpreted in terms of frozen-in fields. Next, it is shown that analogue dynamic Schwinger effect can be used for nonperturbative amplification of nonparametric upconversion process in perovskites driven simultaneously by multiple optical fields. This discovery demonstrates the potential for material response beyond perturbation theory in the tunneling regime, offering extremely sensitive light detection and amplification across an ultrabroad spectral range not accessible by conventional devices."}],"corr_author":"1","acknowledged_ssus":[{"_id":"EM-Fac"}],"language":[{"iso":"eng"}]},{"ddc":["520"],"scopus_import":"1","PlanS_conform":"1","date_updated":"2026-02-16T12:13:12Z","publication":"Astronomy & Astrophysics","type":"journal_article","article_type":"original","article_processing_charge":"No","abstract":[{"text":"The origin of the rest-optical emission of compact, red, high-redshift sources known as little red dots (LRDs) poses a major puzzle. If interpreted as starlight, it would imply that LRDs constitute the densest stellar systems in the Universe. However, alternative models suggest active galactic nuclei (AGN) may instead power the rest-optical continuum. Here, we present JWST/NIRSpec, NIRCam, and MIRI observations from the RUBIES and PRIMER programs of The Cliff: a bright LRD at z = 3.55 with an exceptional Balmer break, twice as strong as that of any high-redshift source previously observed. The spectra also reveal broad hydrogen (Hα FWHM ∼ 1500 km s−1) and He I emission, but no significant metal lines. We demonstrate that massive evolved stellar populations cannot explain the observed spectrum, even when considering unusually steep and strong dust attenuation or reasonable variations in the initial mass function. Moreover, the formally best-fit stellar mass and compact size (M* ∼ 1010.5 M⊙,  re ∼ 40 pc) would imply densities at which near-monthly stellar collisions might lead to significant X-ray emission. We argue that the Balmer break, emission lines, and Hα absorption line are instead most plausibly explained by a black hole star (BH*) scenario, in which dense gas surrounds a powerful ionising source. In contrast to recently proposed BH* models of dust-reddened AGN, we show that spectral fits in the rest UV to near-infrared favour an intrinsically redder continuum over strong dust reddening. This may point to a super-Eddington accreting massive black hole or, possibly, the presence of (super)massive stars in a nuclear star cluster. The Cliff is the clearest evidence to date that at least some LRDs are not ultra-dense massive galaxies, and are instead powered by a central ionising source embedded in dense, absorbing gas.","lang":"eng"}],"language":[{"iso":"eng"}],"article_number":"A168","title":"A remarkable ruby: Absorption in dense gas, rather than evolved stars, drives the extreme Balmer break of a little red dot at z = 3.5","volume":701,"year":"2025","OA_type":"diamond","day":"01","oa":1,"publication_status":"published","doi":"10.1051/0004-6361/202554681","file_date_updated":"2025-09-29T06:59:14Z","publication_identifier":{"eissn":["1432-0746"],"issn":["0004-6361"]},"intvolume":"       701","_id":"20406","date_published":"2025-09-01T00:00:00Z","quality_controlled":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"status":"public","month":"09","publisher":"EDP Sciences","citation":{"ieee":"A. De Graaff <i>et al.</i>, “A remarkable ruby: Absorption in dense gas, rather than evolved stars, drives the extreme Balmer break of a little red dot at z = 3.5,” <i>Astronomy &#38; Astrophysics</i>, vol. 701. EDP Sciences, 2025.","apa":"De Graaff, A., Rix, H. W., Naidu, R. P., Labbé, I., Wang, B., Leja, J., … Williams, C. C. (2025). A remarkable ruby: Absorption in dense gas, rather than evolved stars, drives the extreme Balmer break of a little red dot at z = 3.5. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a href=\"https://doi.org/10.1051/0004-6361/202554681\">https://doi.org/10.1051/0004-6361/202554681</a>","ama":"De Graaff A, Rix HW, Naidu RP, et al. A remarkable ruby: Absorption in dense gas, rather than evolved stars, drives the extreme Balmer break of a little red dot at z = 3.5. <i>Astronomy &#38; Astrophysics</i>. 2025;701. doi:<a href=\"https://doi.org/10.1051/0004-6361/202554681\">10.1051/0004-6361/202554681</a>","ista":"De Graaff A, Rix HW, Naidu RP, Labbé I, Wang B, Leja J, Matthee JJ, Katz H, Greene JE, Hviding RE, Baggen J, Bezanson R, Boogaard LA, Brammer G, Dayal P, Van Dokkum P, Goulding AD, Hirschmann M, Maseda MV, Mcconachie I, Miller TB, Nelson E, Oesch PA, Setton DJ, Shivaei I, Weibel A, Whitaker KE, Williams CC. 2025. A remarkable ruby: Absorption in dense gas, rather than evolved stars, drives the extreme Balmer break of a little red dot at z = 3.5. Astronomy &#38; Astrophysics. 701, A168.","mla":"De Graaff, Anna, et al. “A Remarkable Ruby: Absorption in Dense Gas, Rather than Evolved Stars, Drives the Extreme Balmer Break of a Little Red Dot at z = 3.5.” <i>Astronomy &#38; Astrophysics</i>, vol. 701, A168, EDP Sciences, 2025, doi:<a href=\"https://doi.org/10.1051/0004-6361/202554681\">10.1051/0004-6361/202554681</a>.","short":"A. De Graaff, H.W. Rix, R.P. Naidu, I. Labbé, B. Wang, J. Leja, J.J. Matthee, H. Katz, J.E. Greene, R.E. Hviding, J. Baggen, R. Bezanson, L.A. Boogaard, G. Brammer, P. Dayal, P. Van Dokkum, A.D. Goulding, M. Hirschmann, M.V. Maseda, I. Mcconachie, T.B. Miller, E. Nelson, P.A. Oesch, D.J. Setton, I. Shivaei, A. Weibel, K.E. Whitaker, C.C. Williams, Astronomy &#38; Astrophysics 701 (2025).","chicago":"De Graaff, Anna, Hans Walter Rix, Rohan P. Naidu, Ivo Labbé, Bingjie Wang, Joel Leja, Jorryt J Matthee, et al. “A Remarkable Ruby: Absorption in Dense Gas, Rather than Evolved Stars, Drives the Extreme Balmer Break of a Little Red Dot at z = 3.5.” <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2025. <a href=\"https://doi.org/10.1051/0004-6361/202554681\">https://doi.org/10.1051/0004-6361/202554681</a>."},"date_created":"2025-09-28T22:01:27Z","department":[{"_id":"JoMa"}],"acknowledgement":"We thank the PRIMER team for making their imaging data publicly available immediately. We thank Jaime Villaseñor and Friedrich Röpke for helpful discussions. This work is based on observations made with the NASA/ESA/CSA James Webb Space Telescope. The data were obtained from the Mikulski Archive for Space Telescopes at the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-03127 for JWST. These observations are associated with programs #1837 and #4233. Support for program #4233 was provided by NASA through a grant from the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-03127. REH acknowledges support by the German Aerospace Center (DLR) and the Federal Ministry for Economic Affairs and Energy (BMWi) through program 50OR2403 ‘RUBIES’. This research was supported by the International Space Science Institute (ISSI) in Bern, through ISSI International Team project #562. The Cosmic Dawn Center is funded by the Danish National Research Foundation (DNRF) under grant #140. This work has received funding from the Swiss State Secretariat for Education, Research and Innovation (SERI) under contract number MB22.00072, as well as from the Swiss National Science Foundation (SNSF) through project grant 200020_207349. Support for this work for RPN was provided by NASA through the NASA Hubble Fellowship grant HST-HF2-51515.001-A awarded by the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Incorporated, under NASA contract NAS5-26555. TBM was supported by a CIERA fellowship. Open Access funding provided by Max Planck Society.","has_accepted_license":"1","file":[{"checksum":"cf93d635121dbf4865fd080c517927d0","file_size":1218479,"success":1,"file_name":"2025_AstronomyAstrophysics_deGraaff2.pdf","date_created":"2025-09-29T06:59:14Z","relation":"main_file","access_level":"open_access","creator":"dernst","content_type":"application/pdf","file_id":"20409","date_updated":"2025-09-29T06:59:14Z"}],"oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","author":[{"last_name":"De Graaff","first_name":"Anna","full_name":"De Graaff, Anna"},{"full_name":"Rix, Hans Walter","last_name":"Rix","first_name":"Hans Walter"},{"full_name":"Naidu, Rohan P.","first_name":"Rohan P.","last_name":"Naidu"},{"full_name":"Labbé, Ivo","last_name":"Labbé","first_name":"Ivo"},{"first_name":"Bingjie","last_name":"Wang","full_name":"Wang, Bingjie"},{"full_name":"Leja, Joel","first_name":"Joel","last_name":"Leja"},{"last_name":"Matthee","first_name":"Jorryt J","orcid":"0000-0003-2871-127X","full_name":"Matthee, Jorryt J","id":"7439a258-f3c0-11ec-9501-9df22fe06720"},{"full_name":"Katz, Harley","last_name":"Katz","first_name":"Harley"},{"full_name":"Greene, Jenny E.","last_name":"Greene","first_name":"Jenny E."},{"full_name":"Hviding, Raphael E.","last_name":"Hviding","first_name":"Raphael E."},{"first_name":"Josephine","last_name":"Baggen","full_name":"Baggen, Josephine"},{"first_name":"Rachel","last_name":"Bezanson","full_name":"Bezanson, Rachel"},{"first_name":"Leindert A.","last_name":"Boogaard","full_name":"Boogaard, Leindert A."},{"first_name":"Gabriel","last_name":"Brammer","full_name":"Brammer, Gabriel"},{"first_name":"Pratika","last_name":"Dayal","full_name":"Dayal, Pratika"},{"full_name":"Van Dokkum, Pieter","last_name":"Van Dokkum","first_name":"Pieter"},{"last_name":"Goulding","first_name":"Andy D.","full_name":"Goulding, Andy D."},{"last_name":"Hirschmann","first_name":"Michaela","full_name":"Hirschmann, Michaela"},{"first_name":"Michael V.","last_name":"Maseda","full_name":"Maseda, Michael V."},{"full_name":"Mcconachie, Ian","first_name":"Ian","last_name":"Mcconachie"},{"first_name":"Tim B.","last_name":"Miller","full_name":"Miller, Tim B."},{"last_name":"Nelson","first_name":"Erica","full_name":"Nelson, Erica"},{"full_name":"Oesch, Pascal A.","last_name":"Oesch","first_name":"Pascal A."},{"first_name":"David J.","last_name":"Setton","full_name":"Setton, David J."},{"full_name":"Shivaei, Irene","first_name":"Irene","last_name":"Shivaei"},{"full_name":"Weibel, Andrea","first_name":"Andrea","last_name":"Weibel"},{"first_name":"Katherine E.","last_name":"Whitaker","full_name":"Whitaker, Katherine E."},{"full_name":"Williams, Christina C.","first_name":"Christina C.","last_name":"Williams"}],"arxiv":1,"external_id":{"arxiv":["2503.16600"],"isi":["001570450900004"]},"isi":1,"OA_place":"publisher"},{"type":"journal_article","publication":"Foundations of Computational Mathematics","PlanS_conform":"1","date_updated":"2025-09-30T14:44:53Z","scopus_import":"1","article_processing_charge":"Yes (via OA deal)","article_type":"original","oa":1,"day":"15","OA_type":"hybrid","year":"2025","title":"LieDetect: Detection of representation orbits of compact Lie groups from point clouds","language":[{"iso":"eng"}],"abstract":[{"lang":"eng","text":"We suggest a new algorithm to estimate representations of compact Lie groups from finite samples of their orbits. Different from other reported techniques, our method allows the retrieval of the precise representation type as a direct sum of irreducible representations. Moreover, the knowledge of the representation type permits the reconstruction of its orbit, which is useful for identifying the Lie group that generates the action, from a finite list of candidates. Our algorithm is general for any compact Lie group, but only instantiations for SO(2), T^d, SU(2), and SO(3) are considered. Theoretical guarantees of robustness in terms of Hausdorff and Wasserstein distances are derived. Our tools are drawn from geometric measure theory, computational geometry, and optimization on matrix manifolds. The algorithm is tested for synthetic data up to dimension 32, as well as real-life applications in image analysis, harmonic analysis, density estimation, equivariant neural networks, chemical conformational spaces, and classical mechanics systems, achieving very accurate results."}],"corr_author":"1","main_file_link":[{"url":"https://doi.org/10.1007/s10208-025-09728-4","open_access":"1"}],"doi":"10.1007/s10208-025-09728-4","publication_status":"epub_ahead","quality_controlled":"1","date_published":"2025-09-15T00:00:00Z","_id":"20407","publication_identifier":{"issn":["1615-3375"],"eissn":["1615-3383"]},"date_created":"2025-09-28T22:01:27Z","department":[{"_id":"UlWa"}],"citation":{"ieee":"H. Ennes and R. Tinarrage, “LieDetect: Detection of representation orbits of compact Lie groups from point clouds,” <i>Foundations of Computational Mathematics</i>. Springer Nature, 2025.","ama":"Ennes H, Tinarrage R. LieDetect: Detection of representation orbits of compact Lie groups from point clouds. <i>Foundations of Computational Mathematics</i>. 2025. doi:<a href=\"https://doi.org/10.1007/s10208-025-09728-4\">10.1007/s10208-025-09728-4</a>","apa":"Ennes, H., &#38; Tinarrage, R. (2025). LieDetect: Detection of representation orbits of compact Lie groups from point clouds. <i>Foundations of Computational Mathematics</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s10208-025-09728-4\">https://doi.org/10.1007/s10208-025-09728-4</a>","chicago":"Ennes, Henrique, and Raphaël Tinarrage. “LieDetect: Detection of Representation Orbits of Compact Lie Groups from Point Clouds.” <i>Foundations of Computational Mathematics</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s10208-025-09728-4\">https://doi.org/10.1007/s10208-025-09728-4</a>.","ista":"Ennes H, Tinarrage R. 2025. LieDetect: Detection of representation orbits of compact Lie groups from point clouds. Foundations of Computational Mathematics.","short":"H. Ennes, R. Tinarrage, Foundations of Computational Mathematics (2025).","mla":"Ennes, Henrique, and Raphaël Tinarrage. “LieDetect: Detection of Representation Orbits of Compact Lie Groups from Point Clouds.” <i>Foundations of Computational Mathematics</i>, Springer Nature, 2025, doi:<a href=\"https://doi.org/10.1007/s10208-025-09728-4\">10.1007/s10208-025-09728-4</a>."},"publisher":"Springer Nature","month":"09","status":"public","acknowledgement":"The original work behind this article was developed for HE’s master’s thesis, supervised by RT. We are mostly in debt to César Camacho, who was HE’s co-advisor, as well as the members of the thesis jury, Clément Maria, Eduardo Mendes, and Jameson Cahill, not only for agreeing to evaluate the original work but also for many valuable inputs. Finally, we are indebted to the anonymous reviewers for their important feedback and suggestions. Open access funding provided by Institute of Science and Technology (IST Austria).","OA_place":"publisher","isi":1,"arxiv":1,"external_id":{"arxiv":["2309.03086"],"isi":["001571197200001"]},"author":[{"full_name":"Ennes, Henrique","last_name":"Ennes","first_name":"Henrique"},{"first_name":"Raphaël","last_name":"Tinarrage","full_name":"Tinarrage, Raphaël","id":"40ebcc9d-905f-11ef-bf0a-dc475da8a04e","orcid":"0000-0002-1404-1095"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","oa_version":"Published Version"},{"_id":"20423","publication_identifier":{"eissn":["2363-9555"]},"intvolume":"        11","issue":"4","date_published":"2025-09-23T00:00:00Z","project":[{"_id":"26AEDAB2-B435-11E9-9278-68D0E5697425","name":"New frontiers of the Manin conjecture","call_identifier":"FWF","grant_number":"P32428"}],"quality_controlled":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"month":"09","status":"public","citation":{"chicago":"Rome, Nick, and Shuntaro Yamagishi. “On the Existence of Magic Squares of Powers.” <i>Research in Number Theory</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s40993-025-00671-5\">https://doi.org/10.1007/s40993-025-00671-5</a>.","short":"N. Rome, S. Yamagishi, Research in Number Theory 11 (2025).","mla":"Rome, Nick, and Shuntaro Yamagishi. “On the Existence of Magic Squares of Powers.” <i>Research in Number Theory</i>, vol. 11, no. 4, 91, Springer Nature, 2025, doi:<a href=\"https://doi.org/10.1007/s40993-025-00671-5\">10.1007/s40993-025-00671-5</a>.","ista":"Rome N, Yamagishi S. 2025. On the existence of magic squares of powers. Research in Number Theory. 11(4), 91.","ieee":"N. Rome and S. Yamagishi, “On the existence of magic squares of powers,” <i>Research in Number Theory</i>, vol. 11, no. 4. Springer Nature, 2025.","ama":"Rome N, Yamagishi S. On the existence of magic squares of powers. <i>Research in Number Theory</i>. 2025;11(4). doi:<a href=\"https://doi.org/10.1007/s40993-025-00671-5\">10.1007/s40993-025-00671-5</a>","apa":"Rome, N., &#38; Yamagishi, S. (2025). On the existence of magic squares of powers. <i>Research in Number Theory</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s40993-025-00671-5\">https://doi.org/10.1007/s40993-025-00671-5</a>"},"publisher":"Springer Nature","date_created":"2025-10-05T22:01:34Z","department":[{"_id":"TiBr"}],"file":[{"date_created":"2025-10-13T11:28:49Z","relation":"main_file","access_level":"open_access","success":1,"checksum":"d41fbdc0cfc1fbceb519eb49b20a3ec2","file_size":428531,"file_name":"2025_ResearchNumberTheory_Rome.pdf","date_updated":"2025-10-13T11:28:49Z","file_id":"20463","creator":"dernst","content_type":"application/pdf"}],"has_accepted_license":"1","acknowledgement":"The authors are grateful to Tim Browning for his constant encouragement and enthusiasm, Jörg Brüdern for very helpful discussion regarding his paper [1] and Diyuan Wu for turning the proof of Theorem 2.4 in the original version into an algorithm and running the computation for us, for which the results are available in the appendix of the original version. They would also like to thank Christian Boyer for maintaining his website [4] which contains a comprehensive list of various magic squares discovered, Brady Haran and Tony Várilly-Alvarado for their public engagement activity of mathematics and magic squares of squares (A YouTube video “Magic Squares of Squares (are PROBABLY impossible)” of the Numberphile channel by Brady Haran, in which Tony Várilly-Alvarado appears as a guest speaker: https://www.youtube.com/watch?v=Kdsj84UdeYg.), and all the magic squares enthusiasts who have contributed to [4] which made this paper possible. Finally, the authors would like to thank the anonymous referees for their helpful comments, Daniel Flores for his work [11] which inspired them to optimise the proof of Theorem 2.4 and Trevor Wooley for very helpful discussion regarding recent developments in Waring’s problem and his comments on the original version of this paper.\r\nOpen access funding provided by Institute of Science and Technology (IST Austria). NR was supported by FWF project ESP 441-NBL while SY by a FWF grant (DOI 10.55776/P32428).","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","arxiv":1,"external_id":{"arxiv":["2406.09364"]},"author":[{"full_name":"Rome, Nick","first_name":"Nick","last_name":"Rome"},{"full_name":"Yamagishi, Shuntaro","id":"0c3fbc5c-f7a6-11ec-8d70-9485e75b416b","last_name":"Yamagishi","first_name":"Shuntaro"}],"OA_place":"publisher","scopus_import":"1","ddc":["510"],"publication":"Research in Number Theory","type":"journal_article","date_updated":"2025-10-13T12:30:40Z","PlanS_conform":"1","article_type":"original","article_processing_charge":"Yes (via OA deal)","abstract":[{"text":"For any d  2, we prove that there exists an integer n0(d) such that there exists an n × n\r\nmagic square of dth powers for all n  n0(d). In particular, we establish the existence of\r\nan n × n magic square of squares for all n  4, which settles a conjecture of\r\nVárilly-Alvarado. All previous approaches had been based on constructive methods and\r\nthe existence of n × n magic squares of dth powers had only been known for sparse\r\nvalues of n. We prove our result by the Hardy-Littlewood circle method, which in this\r\nsetting essentially reduces the problem to finding a sufficient number of disjoint linearly\r\nindependent subsets of the columns of the coefficient matrix of the equations defining\r\nmagic squares. We prove an optimal (up to a constant) lower bound for this quantity.","lang":"eng"}],"corr_author":"1","article_number":"91","language":[{"iso":"eng"}],"year":"2025","title":"On the existence of magic squares of powers","volume":11,"oa":1,"day":"23","OA_type":"hybrid","publication_status":"published","doi":"10.1007/s40993-025-00671-5","file_date_updated":"2025-10-13T11:28:49Z"},{"oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","isi":1,"OA_place":"publisher","pmid":1,"author":[{"full_name":"Sahu, Preeti","id":"55BA52EE-A185-11EA-88FD-18AD3DDC885E","last_name":"Sahu","first_name":"Preeti"},{"last_name":"Monteiro-Ferreira","first_name":"Sara","full_name":"Monteiro-Ferreira, Sara"},{"last_name":"Canato","first_name":"Sara","full_name":"Canato, Sara"},{"last_name":"Soares","first_name":"Raquel Maia","full_name":"Soares, Raquel Maia"},{"last_name":"Sánchez-Danés","first_name":"Adriana","full_name":"Sánchez-Danés, Adriana"},{"last_name":"Hannezo","first_name":"Edouard B","full_name":"Hannezo, Edouard B","orcid":"0000-0001-6005-1561","id":"3A9DB764-F248-11E8-B48F-1D18A9856A87"}],"DOAJ_listed":"1","external_id":{"isi":["001582555200011"],"pmid":["41006218"]},"acknowledgement":"We thank Alois Schlögl, Paula Sanematsu, Susana Moreno Flores, Bernat Corominas-Murtra, Stefania Tavano, Gayathri Singharaju, and Hannezo group members for helpful discussions, the Bioimaging facility at ISTA, as well as Matthias Merkel and Lisa Manning for sharing the 3D Voronoi code. We also thank the Champalimaud animal facility, Anna Pezzarossa and the Champalimaud ABBE platform for the help with microscopy and image processing. This work was supported by EMBO (ALTF 522-2021), a Fundação para a Ciência e Tecnologia grant to A.S.D. (PTDC/MED-ONC/5553/2020), as well as the European Research Council (grant 851288 to EH). A.S.D., S.C., and R.M.S. are supported by QuantOCancer Project Horizon European Union’s Horizon 2020 program (grant agreement No 810653).","has_accepted_license":"1","file":[{"date_updated":"2025-10-13T12:37:04Z","file_id":"20464","creator":"dernst","content_type":"application/pdf","date_created":"2025-10-13T12:37:04Z","access_level":"open_access","relation":"main_file","file_name":"2025_NatureComm_Sahu.pdf","success":1,"checksum":"d1656576883b23902545328e2d640234","file_size":2816813}],"status":"public","month":"09","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","image":"/images/cc_by_nc_nd.png","short":"CC BY-NC-ND (4.0)"},"department":[{"_id":"EdHa"}],"date_created":"2025-10-05T22:01:34Z","publisher":"Springer Nature","citation":{"ieee":"P. Sahu, S. Monteiro-Ferreira, S. Canato, R. M. Soares, A. Sánchez-Danés, and E. B. Hannezo, “Mechanical control of cell fate decisions in the skin epidermis,” <i>Nature Communications</i>, vol. 16. Springer Nature, 2025.","apa":"Sahu, P., Monteiro-Ferreira, S., Canato, S., Soares, R. M., Sánchez-Danés, A., &#38; Hannezo, E. B. (2025). Mechanical control of cell fate decisions in the skin epidermis. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-025-62882-9\">https://doi.org/10.1038/s41467-025-62882-9</a>","ama":"Sahu P, Monteiro-Ferreira S, Canato S, Soares RM, Sánchez-Danés A, Hannezo EB. Mechanical control of cell fate decisions in the skin epidermis. <i>Nature Communications</i>. 2025;16. doi:<a href=\"https://doi.org/10.1038/s41467-025-62882-9\">10.1038/s41467-025-62882-9</a>","chicago":"Sahu, Preeti, Sara Monteiro-Ferreira, Sara Canato, Raquel Maia Soares, Adriana Sánchez-Danés, and Edouard B Hannezo. “Mechanical Control of Cell Fate Decisions in the Skin Epidermis.” <i>Nature Communications</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1038/s41467-025-62882-9\">https://doi.org/10.1038/s41467-025-62882-9</a>.","short":"P. Sahu, S. Monteiro-Ferreira, S. Canato, R.M. Soares, A. Sánchez-Danés, E.B. Hannezo, Nature Communications 16 (2025).","mla":"Sahu, Preeti, et al. “Mechanical Control of Cell Fate Decisions in the Skin Epidermis.” <i>Nature Communications</i>, vol. 16, 8440, Springer Nature, 2025, doi:<a href=\"https://doi.org/10.1038/s41467-025-62882-9\">10.1038/s41467-025-62882-9</a>.","ista":"Sahu P, Monteiro-Ferreira S, Canato S, Soares RM, Sánchez-Danés A, Hannezo EB. 2025. Mechanical control of cell fate decisions in the skin epidermis. Nature Communications. 16, 8440."},"publication_identifier":{"eissn":["2041-1723"]},"intvolume":"        16","_id":"20424","quality_controlled":"1","project":[{"grant_number":"ALTF 522-2021","_id":"628f3fb1-2b32-11ec-9570-83ce778803f7","name":"Biomechanics of stem cell fate determination"},{"call_identifier":"H2020","_id":"05943252-7A3F-11EA-A408-12923DDC885E","name":"Design Principles of Branching Morphogenesis","grant_number":"851288"}],"date_published":"2025-09-26T00:00:00Z","doi":"10.1038/s41467-025-62882-9","publication_status":"published","file_date_updated":"2025-10-13T12:37:04Z","ec_funded":1,"article_number":"8440","language":[{"iso":"eng"}],"acknowledged_ssus":[{"_id":"Bio"}],"abstract":[{"text":"Homeostasis relies on a precise balance of fate choices between renewal and differentiation. Although progress has been done to characterize the dynamics of single-cell fate choices, their underlying mechanistic basis often remains unclear. Concentrating on skin epidermis as a paradigm for multilayered tissues with complex fate choices, we develop a 3D vertex-based model with proliferation in the basal layer, showing that mechanical competition for space naturally gives rise to homeostasis and neutral drift dynamics that are seen experimentally. We then explore the effect of introducing mechanical heterogeneities between cellular subpopulations. We uncover that relatively small tension heterogeneities, reflected by distinct morphological changes in single-cell shapes, can be sufficient to heavily tilt cellular dynamics towards exponential growth. We thus derive a master relationship between cell shape and long-term clonal dynamics, which we validated during basal cell carcinoma initiation in mouse epidermis. Altogether, we propose a theoretical framework to link mechanical forces, quantitative cellular morphologies and cellular fate outcomes in complex tissues.","lang":"eng"}],"corr_author":"1","day":"26","OA_type":"gold","oa":1,"title":"Mechanical control of cell fate decisions in the skin epidermis","volume":16,"year":"2025","article_processing_charge":"Yes","article_type":"original","ddc":["570"],"scopus_import":"1","date_updated":"2025-12-01T12:54:59Z","type":"journal_article","publication":"Nature Communications"},{"file_date_updated":"2025-10-13T09:25:12Z","publication_status":"published","doi":"10.3847/2041-8213/ae057a","title":"The light echo of a high-redshift quasar mapped with Lyα tomography","volume":991,"year":"2025","day":"25","OA_type":"gold","oa":1,"abstract":[{"text":"Ultraviolet (UV) radiation from accreting black holes ionizes the intergalactic gas around early quasars, carving out highly ionized bubbles in their surroundings. Any changes in a quasar’s luminosity are therefore predicted to produce outward-propagating ionization gradients, affecting the Lyα absorption opacity near the quasar’s systemic redshift. This “proximity effect” is well-documented in rest-UV quasar spectra but only provides a one-dimensional probe along our line of sight. Here we present deep spectroscopic observations with the James Webb Space Telescope (JWST) of galaxies in the background of a superluminous quasar at zQSO ≈ 6.3, which reveal the quasar’s “light echo” with Lyα tomography in the transverse direction. This transverse proximity effect is detected for the first time toward multiple galaxy sightlines, allowing us to map the extent and geometry of the quasar’s ionization cone. We obtain constraints on the orientation and inclination of the cone, as well as an upper limit on the obscured solid angle fraction of fobsc < 91%. Additionally, we find a timescale of the quasar’s UV radiation of tqso = 10^5.6+0.1-0.3 yr, which is significantly shorter than would be required to build up the central supermassive black hole (SMBH) with conventional growth models, but is consistent with independent measurements of the quasars’ duty cycle. Our inferred obscured fraction disfavors a scenario where short quasar lifetimes can be explained exclusively by geometric obscuration, and instead supports the idea that radiatively inefficient accretion or growth in initially heavily enshrouded cocoons plays a pivotal role in early SMBH growth. Our results pave the way for novel studies of quasars’ ionizing geometries and radiative histories at early cosmic times.","lang":"eng"}],"article_number":"L40","language":[{"iso":"eng"}],"article_type":"original","article_processing_charge":"Yes","date_updated":"2026-02-16T12:44:42Z","PlanS_conform":"1","type":"journal_article","publication":"The Astrophysical Journal Letters","ddc":["520"],"scopus_import":"1","author":[{"full_name":"Eilers, Anna Christina","last_name":"Eilers","first_name":"Anna Christina"},{"full_name":"Yue, Minghao","last_name":"Yue","first_name":"Minghao"},{"orcid":"0000-0003-2871-127X","full_name":"Matthee, Jorryt J","id":"7439a258-f3c0-11ec-9501-9df22fe06720","last_name":"Matthee","first_name":"Jorryt J"},{"full_name":"Hennawi, Joseph F.","last_name":"Hennawi","first_name":"Joseph F."},{"last_name":"Davies","first_name":"Frederick B.","full_name":"Davies, Frederick B."},{"full_name":"Simcoe, Robert A.","last_name":"Simcoe","first_name":"Robert A."},{"last_name":"Teague","first_name":"Richard","full_name":"Teague, Richard"},{"last_name":"Bordoloi","first_name":"Rongmon","full_name":"Bordoloi, Rongmon"},{"full_name":"Brammer, Gabriel","last_name":"Brammer","first_name":"Gabriel"},{"full_name":"Kang, Yi","last_name":"Kang","first_name":"Yi"},{"full_name":"Kashino, Daichi","last_name":"Kashino","first_name":"Daichi"},{"first_name":"Ruari","last_name":"Mackenzie","full_name":"Mackenzie, Ruari"},{"last_name":"Naidu","first_name":"Rohan P.","full_name":"Naidu, Rohan P."},{"full_name":"Navarrete, Benjamín","id":"aa14a535-50c9-11ef-b52e-e0c373d10148","last_name":"Navarrete","first_name":"Benjamín"}],"external_id":{"arxiv":["2509.05417"],"isi":["001581023000001"]},"DOAJ_listed":"1","arxiv":1,"isi":1,"OA_place":"publisher","oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","acknowledgement":"This work is based on observations made with the NASA/ESA/CSA James Webb Space Telescope. The data were obtained from the Mikulski Archive for Space Telescopes at the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-03127 for JWST. These observations are associated with programs #1243 and #4713.\r\n\r\nAll of the data presented in this Letter were obtained from the Mikulski Archive for Space Telescopes (MAST) at the Space Telescope Science Institute. The specific observations analyzed can be accessed via doi:10.17909/w7hm-qb39.\r\nJ.M. is supported by the European Union (ERC, AGENTS, 101076224).","has_accepted_license":"1","file":[{"creator":"dernst","content_type":"application/pdf","file_id":"20461","date_updated":"2025-10-13T09:25:12Z","file_name":"2025_AstrophysicalJour_Eilers.pdf","success":1,"checksum":"3cb8099b9a915755164e5675b33f8a03","file_size":23585591,"date_created":"2025-10-13T09:25:12Z","access_level":"open_access","relation":"main_file"}],"publisher":"IOP Publishing","citation":{"chicago":"Eilers, Anna Christina, Minghao Yue, Jorryt J Matthee, Joseph F. Hennawi, Frederick B. Davies, Robert A. Simcoe, Richard Teague, et al. “The Light Echo of a High-Redshift Quasar Mapped with Lyα Tomography.” <i>The Astrophysical Journal Letters</i>. IOP Publishing, 2025. <a href=\"https://doi.org/10.3847/2041-8213/ae057a\">https://doi.org/10.3847/2041-8213/ae057a</a>.","ista":"Eilers AC, Yue M, Matthee JJ, Hennawi JF, Davies FB, Simcoe RA, Teague R, Bordoloi R, Brammer G, Kang Y, Kashino D, Mackenzie R, Naidu RP, Navarrete B. 2025. The light echo of a high-redshift quasar mapped with Lyα tomography. The Astrophysical Journal Letters. 991(2), L40.","short":"A.C. Eilers, M. Yue, J.J. Matthee, J.F. Hennawi, F.B. Davies, R.A. Simcoe, R. Teague, R. Bordoloi, G. Brammer, Y. Kang, D. Kashino, R. Mackenzie, R.P. Naidu, B. Navarrete, The Astrophysical Journal Letters 991 (2025).","mla":"Eilers, Anna Christina, et al. “The Light Echo of a High-Redshift Quasar Mapped with Lyα Tomography.” <i>The Astrophysical Journal Letters</i>, vol. 991, no. 2, L40, IOP Publishing, 2025, doi:<a href=\"https://doi.org/10.3847/2041-8213/ae057a\">10.3847/2041-8213/ae057a</a>.","ieee":"A. C. Eilers <i>et al.</i>, “The light echo of a high-redshift quasar mapped with Lyα tomography,” <i>The Astrophysical Journal Letters</i>, vol. 991, no. 2. IOP Publishing, 2025.","ama":"Eilers AC, Yue M, Matthee JJ, et al. The light echo of a high-redshift quasar mapped with Lyα tomography. <i>The Astrophysical Journal Letters</i>. 2025;991(2). doi:<a href=\"https://doi.org/10.3847/2041-8213/ae057a\">10.3847/2041-8213/ae057a</a>","apa":"Eilers, A. C., Yue, M., Matthee, J. J., Hennawi, J. F., Davies, F. B., Simcoe, R. A., … Navarrete, B. (2025). The light echo of a high-redshift quasar mapped with Lyα tomography. <i>The Astrophysical Journal Letters</i>. IOP Publishing. <a href=\"https://doi.org/10.3847/2041-8213/ae057a\">https://doi.org/10.3847/2041-8213/ae057a</a>"},"department":[{"_id":"JoMa"},{"_id":"GradSch"}],"date_created":"2025-10-05T22:01:35Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)"},"status":"public","month":"09","date_published":"2025-09-25T00:00:00Z","project":[{"grant_number":"101076224","name":"Young galaxies as tracers and agents of cosmic reionization","_id":"bd9b2118-d553-11ed-ba76-db24564edfea"}],"quality_controlled":"1","publication_identifier":{"eissn":["2041-8213"],"issn":["2041-8205"]},"intvolume":"       991","issue":"2","_id":"20425"}]