[{"quality_controlled":"1","author":[{"first_name":"A","full_name":"Maghiaoui, A","last_name":"Maghiaoui"},{"full_name":"Bouguyon, E","first_name":"E","last_name":"Bouguyon"},{"last_name":"Cuesta","id":"33A3C818-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-1923-2410","first_name":"Candela","full_name":"Cuesta, Candela"},{"first_name":"F","full_name":"Perrine-Walker, F","last_name":"Perrine-Walker"},{"first_name":"C","full_name":"Alcon, C","last_name":"Alcon"},{"last_name":"Krouk","first_name":"G","full_name":"Krouk, G"},{"full_name":"Benková, Eva","first_name":"Eva","id":"38F4F166-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8510-9739","last_name":"Benková"},{"last_name":"Nacry","first_name":"P","full_name":"Nacry, P"},{"full_name":"Gojon, A","first_name":"A","last_name":"Gojon"},{"full_name":"Bach, L","first_name":"L","last_name":"Bach"}],"main_file_link":[{"open_access":"1","url":"https://hal.inrae.fr/hal-02619371"}],"department":[{"_id":"EvBe"}],"publisher":"Oxford University Press","issue":"15","publication_identifier":{"issn":["0022-0957"],"eissn":["1460-2431"]},"intvolume":"        71","_id":"7948","type":"journal_article","language":[{"iso":"eng"}],"date_created":"2020-06-08T10:10:28Z","title":"The Arabidopsis NRT1.1 transceptor coordinately controls auxin biosynthesis and transport to regulate root branching in response to nitrate","article_processing_charge":"No","external_id":{"isi":["000553127600013"],"pmid":["32428238"]},"article_type":"original","status":"public","month":"07","oa_version":"Submitted Version","citation":{"apa":"Maghiaoui, A., Bouguyon, E., Cuesta, C., Perrine-Walker, F., Alcon, C., Krouk, G., … Bach, L. (2020). The Arabidopsis NRT1.1 transceptor coordinately controls auxin biosynthesis and transport to regulate root branching in response to nitrate. <i>Journal of Experimental Botany</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/jxb/eraa242\">https://doi.org/10.1093/jxb/eraa242</a>","ista":"Maghiaoui A, Bouguyon E, Cuesta C, Perrine-Walker F, Alcon C, Krouk G, Benková E, Nacry P, Gojon A, Bach L. 2020. The Arabidopsis NRT1.1 transceptor coordinately controls auxin biosynthesis and transport to regulate root branching in response to nitrate. Journal of Experimental Botany. 71(15), 4480–4494.","mla":"Maghiaoui, A., et al. “The Arabidopsis NRT1.1 Transceptor Coordinately Controls Auxin Biosynthesis and Transport to Regulate Root Branching in Response to Nitrate.” <i>Journal of Experimental Botany</i>, vol. 71, no. 15, Oxford University Press, 2020, pp. 4480–94, doi:<a href=\"https://doi.org/10.1093/jxb/eraa242\">10.1093/jxb/eraa242</a>.","chicago":"Maghiaoui, A, E Bouguyon, Candela Cuesta, F Perrine-Walker, C Alcon, G Krouk, Eva Benková, P Nacry, A Gojon, and L Bach. “The Arabidopsis NRT1.1 Transceptor Coordinately Controls Auxin Biosynthesis and Transport to Regulate Root Branching in Response to Nitrate.” <i>Journal of Experimental Botany</i>. Oxford University Press, 2020. <a href=\"https://doi.org/10.1093/jxb/eraa242\">https://doi.org/10.1093/jxb/eraa242</a>.","ieee":"A. Maghiaoui <i>et al.</i>, “The Arabidopsis NRT1.1 transceptor coordinately controls auxin biosynthesis and transport to regulate root branching in response to nitrate,” <i>Journal of Experimental Botany</i>, vol. 71, no. 15. Oxford University Press, pp. 4480–4494, 2020.","short":"A. Maghiaoui, E. Bouguyon, C. Cuesta, F. Perrine-Walker, C. Alcon, G. Krouk, E. Benková, P. Nacry, A. Gojon, L. Bach, Journal of Experimental Botany 71 (2020) 4480–4494.","ama":"Maghiaoui A, Bouguyon E, Cuesta C, et al. The Arabidopsis NRT1.1 transceptor coordinately controls auxin biosynthesis and transport to regulate root branching in response to nitrate. <i>Journal of Experimental Botany</i>. 2020;71(15):4480-4494. doi:<a href=\"https://doi.org/10.1093/jxb/eraa242\">10.1093/jxb/eraa242</a>"},"pmid":1,"doi":"10.1093/jxb/eraa242","abstract":[{"text":"In agricultural systems, nitrate is the main source of nitrogen available for plants. Besides its role as a nutrient, nitrate has been shown to act as a signal molecule for plant growth, development and stress responses. In Arabidopsis, the NRT1.1 nitrate transceptor represses lateral root (LR) development at low nitrate availability by promoting auxin basipetal transport out of the LR primordia (LRPs). In addition, our present study shows that NRT1.1 acts as a negative regulator of the TAR2 auxin biosynthetic gene expression in the root stele. This is expected to repress local auxin biosynthesis and thus to reduce acropetal auxin supply to the LRPs. Moreover, NRT1.1 also negatively affects expression of the LAX3 auxin influx carrier, thus preventing cell wall remodeling required for overlying tissues separation during LRP emergence. Both NRT1.1-mediated repression of TAR2 and LAX3 are suppressed at high nitrate availability, resulting in the nitrate induction of TAR2 and LAX3 expression that is required for optimal stimulation of LR development by nitrate. Altogether, our results indicate that the NRT1.1 transceptor coordinately controls several crucial auxin-associated processes required for LRP development, and as a consequence that NRT1.1 plays a much more integrated role than previously anticipated in regulating the nitrate response of root system architecture.","lang":"eng"}],"page":"4480-4494","publication_status":"published","year":"2020","day":"25","scopus_import":"1","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","date_updated":"2024-10-21T06:02:27Z","volume":71,"publication":"Journal of Experimental Botany","isi":1,"oa":1,"date_published":"2020-07-25T00:00:00Z"},{"oa_version":"Published Version","citation":{"ista":"Smith S, Zhu S, Joos L, Roberts I, Nikonorova N, Vu L, Stes E, Cho H, Larrieu A, Xuan W, Goodall B, van de Cotte B, Waite J, Rigal A, R Harborough S, Persiau G, Vanneste S, Kirschner G, Vandermarliere E, Martens L, Stahl Y, Audenaert D, Friml J, Felix G, Simon R, Bennett M, Bishopp A, De Jaeger G, Ljung K, Kepinski S, Robert S, Nemhauser J, Hwang I, Gevaert K, Beeckman T, De Smet I. 2020. The CEP5 peptide promotes abiotic stress tolerance, as revealed by quantitative proteomics, and attenuates the AUX/IAA equilibrium in Arabidopsis. Molecular &#38; Cellular Proteomics. 19(8), 1248–1262.","apa":"Smith, S., Zhu, S., Joos, L., Roberts, I., Nikonorova, N., Vu, L., … De Smet, I. (2020). The CEP5 peptide promotes abiotic stress tolerance, as revealed by quantitative proteomics, and attenuates the AUX/IAA equilibrium in Arabidopsis. <i>Molecular &#38; Cellular Proteomics</i>. American Society for Biochemistry and Molecular Biology. <a href=\"https://doi.org/10.1074/mcp.ra119.001826\">https://doi.org/10.1074/mcp.ra119.001826</a>","chicago":"Smith, S, S Zhu, L Joos, I Roberts, N Nikonorova, LD Vu, E Stes, et al. “The CEP5 Peptide Promotes Abiotic Stress Tolerance, as Revealed by Quantitative Proteomics, and Attenuates the AUX/IAA Equilibrium in Arabidopsis.” <i>Molecular &#38; Cellular Proteomics</i>. American Society for Biochemistry and Molecular Biology, 2020. <a href=\"https://doi.org/10.1074/mcp.ra119.001826\">https://doi.org/10.1074/mcp.ra119.001826</a>.","mla":"Smith, S., et al. “The CEP5 Peptide Promotes Abiotic Stress Tolerance, as Revealed by Quantitative Proteomics, and Attenuates the AUX/IAA Equilibrium in Arabidopsis.” <i>Molecular &#38; Cellular Proteomics</i>, vol. 19, no. 8, American Society for Biochemistry and Molecular Biology, 2020, pp. 1248–62, doi:<a href=\"https://doi.org/10.1074/mcp.ra119.001826\">10.1074/mcp.ra119.001826</a>.","ieee":"S. Smith <i>et al.</i>, “The CEP5 peptide promotes abiotic stress tolerance, as revealed by quantitative proteomics, and attenuates the AUX/IAA equilibrium in Arabidopsis,” <i>Molecular &#38; Cellular Proteomics</i>, vol. 19, no. 8. American Society for Biochemistry and Molecular Biology, pp. 1248–1262, 2020.","ama":"Smith S, Zhu S, Joos L, et al. The CEP5 peptide promotes abiotic stress tolerance, as revealed by quantitative proteomics, and attenuates the AUX/IAA equilibrium in Arabidopsis. <i>Molecular &#38; Cellular Proteomics</i>. 2020;19(8):1248-1262. doi:<a href=\"https://doi.org/10.1074/mcp.ra119.001826\">10.1074/mcp.ra119.001826</a>","short":"S. Smith, S. Zhu, L. Joos, I. Roberts, N. Nikonorova, L. Vu, E. Stes, H. Cho, A. Larrieu, W. Xuan, B. Goodall, B. van de Cotte, J. Waite, A. Rigal, S. R Harborough, G. Persiau, S. Vanneste, G. Kirschner, E. Vandermarliere, L. Martens, Y. Stahl, D. Audenaert, J. Friml, G. Felix, R. Simon, M. Bennett, A. Bishopp, G. De Jaeger, K. Ljung, S. Kepinski, S. Robert, J. Nemhauser, I. Hwang, K. Gevaert, T. Beeckman, I. De Smet, Molecular &#38; Cellular Proteomics 19 (2020) 1248–1262."},"pmid":1,"status":"public","month":"08","publication_status":"published","page":"1248-1262","abstract":[{"lang":"eng","text":"Peptides derived from non-functional precursors play important roles in various developmental processes, but also in (a)biotic stress signaling. Our (phospho)proteome-wide analyses of C-terminally encoded peptide 5 (CEP5)-mediated changes revealed an impact on abiotic stress-related processes. Drought has a dramatic impact on plant growth, development and reproduction, and the plant hormone auxin plays a role in drought responses. Our genetic, physiological, biochemical and pharmacological results demonstrated that CEP5-mediated signaling is relevant for osmotic and drought stress tolerance in Arabidopsis, and that CEP5 specifically counteracts auxin effects. Specifically, we found that CEP5 signaling stabilizes AUX/IAA transcriptional repressors, suggesting the existence of a novel peptide-dependent control mechanism that tunes auxin signaling. These observations align with the recently described role of AUX/IAAs in stress tolerance and provide a novel role for CEP5 in osmotic and drought stress tolerance."}],"doi":"10.1074/mcp.ra119.001826","scopus_import":"1","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","year":"2020","has_accepted_license":"1","day":"01","isi":1,"publication":"Molecular & Cellular Proteomics","acknowledgement":"We thank Maria Njo, Sarah De Cokere, Marieke Mispelaere and Darren Wells, for practical assistance, Daniël Van Damme for assistance with image analysis, Marnik Vuylsteke for advice on statistics, Catherine Perrot-Rechenmann for useful discussions, Steffen Lau for critical reading oft he manuscript, and Philip Benfey, Gerd Jürgens, Philippe Nacry, Frederik Börnke, and Frans Tax for sharing materials.","file_date_updated":"2021-05-05T10:10:14Z","oa":1,"ddc":["580"],"date_published":"2020-08-01T00:00:00Z","date_updated":"2023-09-05T12:17:46Z","volume":19,"department":[{"_id":"JiFr"}],"publisher":"American Society for Biochemistry and Molecular Biology","issue":"8","quality_controlled":"1","author":[{"last_name":"Smith","first_name":"S","full_name":"Smith, S"},{"first_name":"S","full_name":"Zhu, S","last_name":"Zhu"},{"last_name":"Joos","full_name":"Joos, L","first_name":"L"},{"first_name":"I","full_name":"Roberts, I","last_name":"Roberts"},{"first_name":"N","full_name":"Nikonorova, N","last_name":"Nikonorova"},{"full_name":"Vu, LD","first_name":"LD","last_name":"Vu"},{"first_name":"E","full_name":"Stes, E","last_name":"Stes"},{"last_name":"Cho","full_name":"Cho, H","first_name":"H"},{"full_name":"Larrieu, A","first_name":"A","last_name":"Larrieu"},{"last_name":"Xuan","first_name":"W","full_name":"Xuan, W"},{"last_name":"Goodall","full_name":"Goodall, B","first_name":"B"},{"first_name":"B","full_name":"van de Cotte, B","last_name":"van de Cotte"},{"last_name":"Waite","full_name":"Waite, JM","first_name":"JM"},{"first_name":"A","full_name":"Rigal, A","last_name":"Rigal"},{"full_name":"R Harborough, SR","first_name":"SR","last_name":"R Harborough"},{"last_name":"Persiau","full_name":"Persiau, G","first_name":"G"},{"full_name":"Vanneste, S","first_name":"S","last_name":"Vanneste"},{"full_name":"Kirschner, GK","first_name":"GK","last_name":"Kirschner"},{"first_name":"E","full_name":"Vandermarliere, E","last_name":"Vandermarliere"},{"first_name":"L","full_name":"Martens, L","last_name":"Martens"},{"last_name":"Stahl","full_name":"Stahl, Y","first_name":"Y"},{"last_name":"Audenaert","full_name":"Audenaert, D","first_name":"D"},{"id":"4159519E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8302-7596","last_name":"Friml","full_name":"Friml, Jiří","first_name":"Jiří"},{"first_name":"G","full_name":"Felix, G","last_name":"Felix"},{"last_name":"Simon","full_name":"Simon, R","first_name":"R"},{"first_name":"M","full_name":"Bennett, M","last_name":"Bennett"},{"last_name":"Bishopp","first_name":"A","full_name":"Bishopp, A"},{"last_name":"De Jaeger","first_name":"G","full_name":"De Jaeger, G"},{"full_name":"Ljung, K","first_name":"K","last_name":"Ljung"},{"full_name":"Kepinski, S","first_name":"S","last_name":"Kepinski"},{"last_name":"Robert","first_name":"S","full_name":"Robert, S"},{"first_name":"J","full_name":"Nemhauser, J","last_name":"Nemhauser"},{"last_name":"Hwang","first_name":"I","full_name":"Hwang, I"},{"last_name":"Gevaert","first_name":"K","full_name":"Gevaert, K"},{"first_name":"T","full_name":"Beeckman, T","last_name":"Beeckman"},{"last_name":"De Smet","full_name":"De Smet, I","first_name":"I"}],"intvolume":"        19","_id":"7949","type":"journal_article","language":[{"iso":"eng"}],"publication_identifier":{"eissn":["1535-9484"]},"date_created":"2020-06-08T10:10:53Z","file":[{"content_type":"application/pdf","file_size":1632311,"access_level":"open_access","file_name":"2020_MCP_Smith.pdf","date_created":"2021-05-05T10:10:14Z","success":1,"file_id":"9373","creator":"kschuh","relation":"main_file","date_updated":"2021-05-05T10:10:14Z","checksum":"3f3f37b4a1ba2cfd270fc7733dd89680"}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"external_id":{"isi":["000561114000001"],"pmid":["32404488"]},"article_type":"original","title":"The CEP5 peptide promotes abiotic stress tolerance, as revealed by quantitative proteomics, and attenuates the AUX/IAA equilibrium in Arabidopsis","article_processing_charge":"No"},{"volume":164,"date_updated":"2025-04-22T13:45:17Z","ddc":["510"],"date_published":"2020-06-01T00:00:00Z","oa":1,"file_date_updated":"2020-07-14T12:48:06Z","publication":"36th International Symposium on Computational Geometry","day":"01","has_accepted_license":"1","year":"2020","conference":{"name":"SoCG: Symposium on Computational Geometry","location":"Zürich, Switzerland","end_date":"2020-06-26","start_date":"2020-06-22"},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","abstract":[{"lang":"eng","text":"Isomanifolds are the generalization of isosurfaces to arbitrary dimension and codimension, i.e. manifolds defined as the zero set of some multivariate vector-valued smooth function f: ℝ^d → ℝ^(d-n). A natural (and efficient) way to approximate an isomanifold is to consider its Piecewise-Linear (PL) approximation based on a triangulation 𝒯 of the ambient space ℝ^d. In this paper, we give conditions under which the PL-approximation of an isomanifold is topologically equivalent to the isomanifold. The conditions are easy to satisfy in the sense that they can always be met by taking a sufficiently fine triangulation 𝒯. This contrasts with previous results on the triangulation of manifolds where, in arbitrary dimensions, delicate perturbations are needed to guarantee topological correctness, which leads to strong limitations in practice. We further give a bound on the Fréchet distance between the original isomanifold and its PL-approximation. Finally we show analogous results for the PL-approximation of an isomanifold with boundary. "}],"doi":"10.4230/LIPIcs.SoCG.2020.20","alternative_title":["LIPIcs"],"publication_status":"published","month":"06","status":"public","related_material":{"record":[{"status":"public","id":"9649","relation":"later_version"}]},"citation":{"chicago":"Boissonnat, Jean-Daniel, and Mathijs Wintraecken. “The Topological Correctness of PL-Approximations of Isomanifolds.” In <i>36th International Symposium on Computational Geometry</i>, Vol. 164. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020. <a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.20\">https://doi.org/10.4230/LIPIcs.SoCG.2020.20</a>.","mla":"Boissonnat, Jean-Daniel, and Mathijs Wintraecken. “The Topological Correctness of PL-Approximations of Isomanifolds.” <i>36th International Symposium on Computational Geometry</i>, vol. 164, 20:1-20:18, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020, doi:<a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.20\">10.4230/LIPIcs.SoCG.2020.20</a>.","ista":"Boissonnat J-D, Wintraecken M. 2020. The topological correctness of PL-approximations of isomanifolds. 36th International Symposium on Computational Geometry. SoCG: Symposium on Computational Geometry, LIPIcs, vol. 164, 20:1-20:18.","apa":"Boissonnat, J.-D., &#38; Wintraecken, M. (2020). The topological correctness of PL-approximations of isomanifolds. In <i>36th International Symposium on Computational Geometry</i> (Vol. 164). Zürich, Switzerland: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.20\">https://doi.org/10.4230/LIPIcs.SoCG.2020.20</a>","short":"J.-D. Boissonnat, M. Wintraecken, in:, 36th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020.","ama":"Boissonnat J-D, Wintraecken M. The topological correctness of PL-approximations of isomanifolds. In: <i>36th International Symposium on Computational Geometry</i>. Vol 164. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2020. doi:<a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.20\">10.4230/LIPIcs.SoCG.2020.20</a>","ieee":"J.-D. Boissonnat and M. Wintraecken, “The topological correctness of PL-approximations of isomanifolds,” in <i>36th International Symposium on Computational Geometry</i>, Zürich, Switzerland, 2020, vol. 164."},"oa_version":"Published Version","article_processing_charge":"No","title":"The topological correctness of PL-approximations of isomanifolds","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"date_created":"2020-06-17T10:13:34Z","file_id":"7969","content_type":"application/pdf","access_level":"open_access","file_name":"2020_LIPIcsSoCG_Boissonnat.pdf","file_size":1009739,"creator":"dernst","relation":"main_file","checksum":"38cbfa4f5d484d267a35d44d210df044","date_updated":"2020-07-14T12:48:06Z"}],"date_created":"2020-06-09T07:24:11Z","corr_author":"1","publication_identifier":{"issn":["1868-8969"],"isbn":["978-3-95977-143-6"]},"project":[{"grant_number":"754411","_id":"260C2330-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","name":"ISTplus - Postdoctoral Fellowships"}],"language":[{"iso":"eng"}],"type":"conference","_id":"7952","intvolume":"       164","ec_funded":1,"author":[{"first_name":"Jean-Daniel","full_name":"Boissonnat, Jean-Daniel","last_name":"Boissonnat"},{"first_name":"Mathijs","full_name":"Wintraecken, Mathijs","last_name":"Wintraecken","orcid":"0000-0002-7472-2220","id":"307CFBC8-F248-11E8-B48F-1D18A9856A87"}],"article_number":"20:1-20:18","quality_controlled":"1","publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","department":[{"_id":"HeEd"}]},{"publisher":"Association for Computing Machinery","department":[{"_id":"KrCh"}],"quality_controlled":"1","author":[{"full_name":"Ashok, Pranav","first_name":"Pranav","last_name":"Ashok"},{"id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-4561-241X","last_name":"Chatterjee","full_name":"Chatterjee, Krishnendu","first_name":"Krishnendu"},{"last_name":"Kretinsky","full_name":"Kretinsky, Jan","first_name":"Jan"},{"full_name":"Weininger, Maximilian","first_name":"Maximilian","last_name":"Weininger"},{"full_name":"Winkler, Tobias","first_name":"Tobias","last_name":"Winkler"}],"type":"conference","language":[{"iso":"eng"}],"ec_funded":1,"_id":"7955","publication_identifier":{"isbn":["9781450371049"]},"project":[{"name":"Formal Methods for Stochastic Models: Algorithms and Applications","call_identifier":"H2020","_id":"0599E47C-7A3F-11EA-A408-12923DDC885E","grant_number":"863818"},{"name":"Efficient Algorithms for Computer Aided Verification","_id":"25892FC0-B435-11E9-9278-68D0E5697425","grant_number":"ICT15-003"}],"date_created":"2020-06-14T22:00:48Z","file":[{"relation":"main_file","checksum":"d0d0288fe991dd16cf5f02598b794240","date_updated":"2020-11-25T09:38:14Z","date_created":"2020-11-25T09:38:14Z","file_id":"8804","success":1,"content_type":"application/pdf","access_level":"open_access","file_size":1001395,"file_name":"2020_LICS_Ashok.pdf","creator":"dernst"}],"external_id":{"isi":["000665014900010"],"arxiv":["1908.05106"]},"title":"Approximating values of generalized-reachability stochastic games","article_processing_charge":"No","oa_version":"Published Version","citation":{"ista":"Ashok P, Chatterjee K, Kretinsky J, Weininger M, Winkler T. 2020. Approximating values of generalized-reachability stochastic games. Proceedings of the 35th Annual ACM/IEEE Symposium on Logic in Computer Science . LICS: Logic in Computer Science, 102–115.","apa":"Ashok, P., Chatterjee, K., Kretinsky, J., Weininger, M., &#38; Winkler, T. (2020). Approximating values of generalized-reachability stochastic games. In <i>Proceedings of the 35th Annual ACM/IEEE Symposium on Logic in Computer Science </i> (pp. 102–115). Saarbrücken, Germany: Association for Computing Machinery. <a href=\"https://doi.org/10.1145/3373718.3394761\">https://doi.org/10.1145/3373718.3394761</a>","chicago":"Ashok, Pranav, Krishnendu Chatterjee, Jan Kretinsky, Maximilian Weininger, and Tobias Winkler. “Approximating Values of Generalized-Reachability Stochastic Games.” In <i>Proceedings of the 35th Annual ACM/IEEE Symposium on Logic in Computer Science </i>, 102–15. Association for Computing Machinery, 2020. <a href=\"https://doi.org/10.1145/3373718.3394761\">https://doi.org/10.1145/3373718.3394761</a>.","mla":"Ashok, Pranav, et al. “Approximating Values of Generalized-Reachability Stochastic Games.” <i>Proceedings of the 35th Annual ACM/IEEE Symposium on Logic in Computer Science </i>, Association for Computing Machinery, 2020, pp. 102–15, doi:<a href=\"https://doi.org/10.1145/3373718.3394761\">10.1145/3373718.3394761</a>.","ieee":"P. Ashok, K. Chatterjee, J. Kretinsky, M. Weininger, and T. Winkler, “Approximating values of generalized-reachability stochastic games,” in <i>Proceedings of the 35th Annual ACM/IEEE Symposium on Logic in Computer Science </i>, Saarbrücken, Germany, 2020, pp. 102–115.","short":"P. Ashok, K. Chatterjee, J. Kretinsky, M. Weininger, T. Winkler, in:, Proceedings of the 35th Annual ACM/IEEE Symposium on Logic in Computer Science , Association for Computing Machinery, 2020, pp. 102–115.","ama":"Ashok P, Chatterjee K, Kretinsky J, Weininger M, Winkler T. Approximating values of generalized-reachability stochastic games. In: <i>Proceedings of the 35th Annual ACM/IEEE Symposium on Logic in Computer Science </i>. Association for Computing Machinery; 2020:102-115. doi:<a href=\"https://doi.org/10.1145/3373718.3394761\">10.1145/3373718.3394761</a>"},"month":"07","status":"public","publication_status":"published","page":"102-115","abstract":[{"text":"Simple stochastic games are turn-based 2½-player games with a reachability objective. The basic question asks whether one player can ensure reaching a given target with at least a given probability. A natural extension is games with a conjunction of such conditions as objective. Despite a plethora of recent results on the analysis of systems with multiple objectives, the decidability of this basic problem remains open. In this paper, we present an algorithm approximating the Pareto frontier of the achievable values to a given precision. Moreover, it is an anytime algorithm, meaning it can be stopped at any time returning the current approximation and its error bound.","lang":"eng"}],"doi":"10.1145/3373718.3394761","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","day":"08","year":"2020","conference":{"location":"Saarbrücken, Germany","name":"LICS: Logic in Computer Science","start_date":"2020-07-08","end_date":"2020-07-11"},"has_accepted_license":"1","file_date_updated":"2020-11-25T09:38:14Z","oa":1,"arxiv":1,"ddc":["000"],"date_published":"2020-07-08T00:00:00Z","acknowledgement":"Pranav Ashok, Jan Křetínský and Maximilian Weininger were funded in part by TUM IGSSE Grant 10.06 (PARSEC) and the German Research Foundation (DFG) project KR 4890/2-1\r\n“Statistical Unbounded Verification”. Krishnendu Chatterjee was supported by the ERC CoG 863818 (ForM-SMArt) and Vienna Science and Technology Fund (WWTF) Project ICT15-\r\n003. Tobias Winkler was supported by the RTG 2236 UnRAVe.","publication":"Proceedings of the 35th Annual ACM/IEEE Symposium on Logic in Computer Science ","isi":1,"date_updated":"2025-07-10T11:54:53Z"},{"publication_identifier":{"issn":["01795376"],"eissn":["14320444"]},"type":"journal_article","language":[{"iso":"eng"}],"intvolume":"        64","_id":"7960","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1907.00885"}],"quality_controlled":"1","author":[{"last_name":"Kalai","full_name":"Kalai, Gil","first_name":"Gil"},{"first_name":"Zuzana","full_name":"Patakova, Zuzana","last_name":"Patakova","orcid":"0000-0002-3975-1683","id":"48B57058-F248-11E8-B48F-1D18A9856A87"}],"publisher":"Springer Nature","department":[{"_id":"UlWa"}],"title":"Intersection patterns of planar sets","article_processing_charge":"No","external_id":{"isi":["000537329400001"],"arxiv":["1907.00885"]},"article_type":"original","date_created":"2020-06-14T22:00:50Z","doi":"10.1007/s00454-020-00205-z","abstract":[{"text":"Let A={A1,…,An} be a family of sets in the plane. For 0≤i<n, denote by fi the number of subsets σ of {1,…,n} of cardinality i+1 that satisfy ⋂i∈σAi≠∅. Let k≥2 be an integer. We prove that if each k-wise and (k+1)-wise intersection of sets from A is empty, or a single point, or both open and path-connected, then fk+1=0 implies fk≤cfk−1 for some positive constant c depending only on k. Similarly, let b≥2, k>2b be integers. We prove that if each k-wise or (k+1)-wise intersection of sets from A has at most b path-connected components, which all are open, then fk+1=0 implies fk≤cfk−1 for some positive constant c depending only on b and k. These results also extend to two-dimensional compact surfaces.","lang":"eng"}],"page":"304-323","publication_status":"published","month":"09","status":"public","oa_version":"Preprint","citation":{"short":"G. Kalai, Z. Patakova, Discrete and Computational Geometry 64 (2020) 304–323.","ama":"Kalai G, Patakova Z. Intersection patterns of planar sets. <i>Discrete and Computational Geometry</i>. 2020;64:304-323. doi:<a href=\"https://doi.org/10.1007/s00454-020-00205-z\">10.1007/s00454-020-00205-z</a>","ieee":"G. Kalai and Z. Patakova, “Intersection patterns of planar sets,” <i>Discrete and Computational Geometry</i>, vol. 64. Springer Nature, pp. 304–323, 2020.","mla":"Kalai, Gil, and Zuzana Patakova. “Intersection Patterns of Planar Sets.” <i>Discrete and Computational Geometry</i>, vol. 64, Springer Nature, 2020, pp. 304–23, doi:<a href=\"https://doi.org/10.1007/s00454-020-00205-z\">10.1007/s00454-020-00205-z</a>.","chicago":"Kalai, Gil, and Zuzana Patakova. “Intersection Patterns of Planar Sets.” <i>Discrete and Computational Geometry</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1007/s00454-020-00205-z\">https://doi.org/10.1007/s00454-020-00205-z</a>.","apa":"Kalai, G., &#38; Patakova, Z. (2020). Intersection patterns of planar sets. <i>Discrete and Computational Geometry</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00454-020-00205-z\">https://doi.org/10.1007/s00454-020-00205-z</a>","ista":"Kalai G, Patakova Z. 2020. Intersection patterns of planar sets. Discrete and Computational Geometry. 64, 304–323."},"volume":64,"date_updated":"2023-08-21T08:26:34Z","oa":1,"date_published":"2020-09-01T00:00:00Z","arxiv":1,"publication":"Discrete and Computational Geometry","isi":1,"acknowledgement":"We are very grateful to Pavel Paták for many helpful discussions and remarks. We also thank the referees for helpful comments, which greatly improved the presentation.\r\nThe project was supported by ERC Advanced Grant 320924. GK was also partially supported by NSF grant DMS1300120. The research stay of ZP at IST Austria is funded by the project CZ.02.2.69/0.0/0.0/17_050/0008466 Improvement of internationalization in the field of research and development at Charles University, through the support of quality projects MSCA-IF.","day":"01","year":"2020","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","scopus_import":"1"},{"article_processing_charge":"No","title":"Almost all string graphs are intersection graphs of plane convex sets","article_type":"original","external_id":{"isi":["000538229000001"],"arxiv":["1803.06710"]},"date_created":"2020-06-14T22:00:51Z","project":[{"_id":"268116B8-B435-11E9-9278-68D0E5697425","grant_number":"Z00342","call_identifier":"FWF","name":"Mathematics, Computer Science"}],"publication_identifier":{"issn":["01795376"],"eissn":["14320444"]},"_id":"7962","intvolume":"        63","language":[{"iso":"eng"}],"type":"journal_article","author":[{"last_name":"Pach","id":"E62E3130-B088-11EA-B919-BF823C25FEA4","first_name":"János","full_name":"Pach, János"},{"last_name":"Reed","first_name":"Bruce","full_name":"Reed, Bruce"},{"last_name":"Yuditsky","first_name":"Yelena","full_name":"Yuditsky, Yelena"}],"quality_controlled":"1","main_file_link":[{"url":"https://arxiv.org/abs/1803.06710","open_access":"1"}],"publisher":"Springer Nature","department":[{"_id":"HeEd"}],"issue":"4","date_updated":"2025-04-15T07:16:56Z","volume":63,"isi":1,"publication":"Discrete and Computational Geometry","arxiv":1,"date_published":"2020-06-05T00:00:00Z","oa":1,"year":"2020","day":"05","scopus_import":"1","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","abstract":[{"lang":"eng","text":"A string graph is the intersection graph of a family of continuous arcs in the plane. The intersection graph of a family of plane convex sets is a string graph, but not all string graphs can be obtained in this way. We prove the following structure theorem conjectured by Janson and Uzzell: The vertex set of almost all string graphs on n vertices can be partitioned into five cliques such that some pair of them is not connected by any edge (n→∞). We also show that every graph with the above property is an intersection graph of plane convex sets. As a corollary, we obtain that almost all string graphs on n vertices are intersection graphs of plane convex sets."}],"doi":"10.1007/s00454-020-00213-z","publication_status":"published","page":"888-917","month":"06","status":"public","citation":{"ista":"Pach J, Reed B, Yuditsky Y. 2020. Almost all string graphs are intersection graphs of plane convex sets. Discrete and Computational Geometry. 63(4), 888–917.","apa":"Pach, J., Reed, B., &#38; Yuditsky, Y. (2020). Almost all string graphs are intersection graphs of plane convex sets. <i>Discrete and Computational Geometry</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00454-020-00213-z\">https://doi.org/10.1007/s00454-020-00213-z</a>","chicago":"Pach, János, Bruce Reed, and Yelena Yuditsky. “Almost All String Graphs Are Intersection Graphs of Plane Convex Sets.” <i>Discrete and Computational Geometry</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1007/s00454-020-00213-z\">https://doi.org/10.1007/s00454-020-00213-z</a>.","mla":"Pach, János, et al. “Almost All String Graphs Are Intersection Graphs of Plane Convex Sets.” <i>Discrete and Computational Geometry</i>, vol. 63, no. 4, Springer Nature, 2020, pp. 888–917, doi:<a href=\"https://doi.org/10.1007/s00454-020-00213-z\">10.1007/s00454-020-00213-z</a>.","ieee":"J. Pach, B. Reed, and Y. Yuditsky, “Almost all string graphs are intersection graphs of plane convex sets,” <i>Discrete and Computational Geometry</i>, vol. 63, no. 4. Springer Nature, pp. 888–917, 2020.","short":"J. Pach, B. Reed, Y. Yuditsky, Discrete and Computational Geometry 63 (2020) 888–917.","ama":"Pach J, Reed B, Yuditsky Y. Almost all string graphs are intersection graphs of plane convex sets. <i>Discrete and Computational Geometry</i>. 2020;63(4):888-917. doi:<a href=\"https://doi.org/10.1007/s00454-020-00213-z\">10.1007/s00454-020-00213-z</a>"},"oa_version":"Preprint"},{"date_created":"2020-06-16T14:29:59Z","corr_author":"1","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"success":1,"file_id":"8683","date_created":"2020-10-20T14:39:47Z","access_level":"open_access","file_name":"2020_PhysChemC_Ghazaryan.pdf","file_size":1543429,"content_type":"application/pdf","creator":"kschuh","relation":"main_file","checksum":"25932bb1d0b0a955be0bea4d17facd49","date_updated":"2020-10-20T14:39:47Z"}],"article_type":"original","external_id":{"isi":["000614616200006"],"pmid":["32499842"]},"article_processing_charge":"Yes (via OA deal)","title":"Analytic model of chiral-induced spin selectivity","issue":"21","department":[{"_id":"MiLe"}],"publisher":"American Chemical Society","author":[{"full_name":"Ghazaryan, Areg","first_name":"Areg","orcid":"0000-0001-9666-3543","id":"4AF46FD6-F248-11E8-B48F-1D18A9856A87","last_name":"Ghazaryan"},{"last_name":"Paltiel","full_name":"Paltiel, Yossi","first_name":"Yossi"},{"full_name":"Lemeshko, Mikhail","first_name":"Mikhail","orcid":"0000-0002-6990-7802","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","last_name":"Lemeshko"}],"quality_controlled":"1","language":[{"iso":"eng"}],"type":"journal_article","_id":"7968","intvolume":"       124","ec_funded":1,"publication_identifier":{"eissn":["1932-7455"],"issn":["1932-7447"]},"project":[{"grant_number":"754411","_id":"260C2330-B435-11E9-9278-68D0E5697425","name":"ISTplus - Postdoctoral Fellowships","call_identifier":"H2020"},{"_id":"26031614-B435-11E9-9278-68D0E5697425","grant_number":"P29902","name":"Quantum rotations in the presence of a many-body environment","call_identifier":"FWF"},{"_id":"2688CF98-B435-11E9-9278-68D0E5697425","grant_number":"801770","call_identifier":"H2020","name":"Angulon: physics and applications of a new quasiparticle"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","day":"04","has_accepted_license":"1","year":"2020","date_published":"2020-05-04T00:00:00Z","ddc":["530"],"file_date_updated":"2020-10-20T14:39:47Z","oa":1,"isi":1,"publication":"The Journal of Physical Chemistry C","volume":124,"date_updated":"2025-06-12T07:19:01Z","pmid":1,"citation":{"short":"A. Ghazaryan, Y. Paltiel, M. Lemeshko, The Journal of Physical Chemistry C 124 (2020) 11716–11721.","ama":"Ghazaryan A, Paltiel Y, Lemeshko M. Analytic model of chiral-induced spin selectivity. <i>The Journal of Physical Chemistry C</i>. 2020;124(21):11716-11721. doi:<a href=\"https://doi.org/10.1021/acs.jpcc.0c02584\">10.1021/acs.jpcc.0c02584</a>","ieee":"A. Ghazaryan, Y. Paltiel, and M. Lemeshko, “Analytic model of chiral-induced spin selectivity,” <i>The Journal of Physical Chemistry C</i>, vol. 124, no. 21. American Chemical Society, pp. 11716–11721, 2020.","chicago":"Ghazaryan, Areg, Yossi Paltiel, and Mikhail Lemeshko. “Analytic Model of Chiral-Induced Spin Selectivity.” <i>The Journal of Physical Chemistry C</i>. American Chemical Society, 2020. <a href=\"https://doi.org/10.1021/acs.jpcc.0c02584\">https://doi.org/10.1021/acs.jpcc.0c02584</a>.","mla":"Ghazaryan, Areg, et al. “Analytic Model of Chiral-Induced Spin Selectivity.” <i>The Journal of Physical Chemistry C</i>, vol. 124, no. 21, American Chemical Society, 2020, pp. 11716–21, doi:<a href=\"https://doi.org/10.1021/acs.jpcc.0c02584\">10.1021/acs.jpcc.0c02584</a>.","ista":"Ghazaryan A, Paltiel Y, Lemeshko M. 2020. Analytic model of chiral-induced spin selectivity. The Journal of Physical Chemistry C. 124(21), 11716–11721.","apa":"Ghazaryan, A., Paltiel, Y., &#38; Lemeshko, M. (2020). Analytic model of chiral-induced spin selectivity. <i>The Journal of Physical Chemistry C</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acs.jpcc.0c02584\">https://doi.org/10.1021/acs.jpcc.0c02584</a>"},"oa_version":"Published Version","month":"05","status":"public","page":"11716-11721","publication_status":"published","abstract":[{"text":"Organic materials are known to feature long spin-diffusion times, originating in a generally small spin–orbit coupling observed in these systems. From that perspective, chiral molecules acting as efficient spin selectors pose a puzzle that attracted a lot of attention in recent years. Here, we revisit the physical origins of chiral-induced spin selectivity (CISS) and propose a simple analytic minimal model to describe it. The model treats a chiral molecule as an anisotropic wire with molecular dipole moments aligned arbitrarily with respect to the wire’s axes and is therefore quite general. Importantly, it shows that the helical structure of the molecule is not necessary to observe CISS and other chiral nonhelical molecules can also be considered as potential candidates for the CISS effect. We also show that the suggested simple model captures the main characteristics of CISS observed in the experiment, without the need for additional constraints employed in the previous studies. The results pave the way for understanding other related physical phenomena where the CISS effect plays an essential role.","lang":"eng"}],"doi":"10.1021/acs.jpcc.0c02584"},{"publication_identifier":{"issn":["2469-9950"],"eissn":["2469-9969"]},"type":"journal_article","language":[{"iso":"eng"}],"intvolume":"       101","_id":"7971","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/2002.05739"}],"quality_controlled":"1","article_number":"245411","author":[{"first_name":"Peng","full_name":"Rao, Peng","last_name":"Rao","orcid":"0000-0003-1250-0021","id":"47C23AC6-02D0-11E9-BD0E-99399A5D3DEB"},{"id":"47809E7E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-2399-5827","last_name":"Serbyn","full_name":"Serbyn, Maksym","first_name":"Maksym"}],"issue":"24","department":[{"_id":"MaSe"}],"publisher":"American Physical Society","title":"Gully quantum Hall ferromagnetism in biased trilayer graphene","article_processing_charge":"No","external_id":{"isi":["000538715500010"],"arxiv":["2002.05739"]},"article_type":"original","date_created":"2020-06-17T14:52:06Z","abstract":[{"text":"Multilayer graphene lattices allow for an additional tunability of the band structure by the strong perpendicular electric field. In particular, the emergence of the new multiple Dirac points in ABA stacked trilayer graphene subject to strong transverse electric fields was proposed theoretically and confirmed experimentally. These new Dirac points dubbed “gullies” emerge from the interplay between strong electric field and trigonal warping. In this work, we first characterize the properties of new emergent Dirac points and show that the electric field can be used to tune the distance between gullies in the momentum space. We demonstrate that the band structure has multiple Lifshitz transitions and higher-order singularity of “monkey saddle” type. Following the characterization of the band structure, we consider the spectrum of Landau levels and structure of their wave functions. In the limit of strong electric fields when gullies are well separated in momentum space, they give rise to triply degenerate Landau levels. In the second part of this work, we investigate how degeneracy between three gully Landau levels is lifted in the presence of interactions. Within the Hartree-Fock approximation we show that the symmetry breaking state interpolates between the fully gully polarized state that breaks C3  symmetry at high displacement field and the gully symmetric state when the electric field is decreased. The discontinuous transition between these two states is driven by enhanced intergully tunneling and exchange. We conclude by outlining specific experimental predictions for the existence of such a symmetry-breaking state.","lang":"eng"}],"doi":"10.1103/physrevb.101.245411","publication_status":"published","status":"public","month":"06","oa_version":"Preprint","citation":{"apa":"Rao, P., &#38; Serbyn, M. (2020). Gully quantum Hall ferromagnetism in biased trilayer graphene. <i>Physical Review B</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevb.101.245411\">https://doi.org/10.1103/physrevb.101.245411</a>","ista":"Rao P, Serbyn M. 2020. Gully quantum Hall ferromagnetism in biased trilayer graphene. Physical Review B. 101(24), 245411.","mla":"Rao, Peng, and Maksym Serbyn. “Gully Quantum Hall Ferromagnetism in Biased Trilayer Graphene.” <i>Physical Review B</i>, vol. 101, no. 24, 245411, American Physical Society, 2020, doi:<a href=\"https://doi.org/10.1103/physrevb.101.245411\">10.1103/physrevb.101.245411</a>.","chicago":"Rao, Peng, and Maksym Serbyn. “Gully Quantum Hall Ferromagnetism in Biased Trilayer Graphene.” <i>Physical Review B</i>. American Physical Society, 2020. <a href=\"https://doi.org/10.1103/physrevb.101.245411\">https://doi.org/10.1103/physrevb.101.245411</a>.","ieee":"P. Rao and M. Serbyn, “Gully quantum Hall ferromagnetism in biased trilayer graphene,” <i>Physical Review B</i>, vol. 101, no. 24. American Physical Society, 2020.","ama":"Rao P, Serbyn M. Gully quantum Hall ferromagnetism in biased trilayer graphene. <i>Physical Review B</i>. 2020;101(24). doi:<a href=\"https://doi.org/10.1103/physrevb.101.245411\">10.1103/physrevb.101.245411</a>","short":"P. Rao, M. Serbyn, Physical Review B 101 (2020)."},"volume":101,"date_updated":"2025-06-04T07:45:18Z","oa":1,"arxiv":1,"date_published":"2020-06-15T00:00:00Z","isi":1,"publication":"Physical Review B","day":"15","year":"2020","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1"},{"external_id":{"isi":["000555413600008"],"pmid":["32134255"]},"article_type":"review","title":"Lithium-oxygen batteries and related systems: Potential, status, and future","article_processing_charge":"No","date_created":"2020-06-19T08:42:47Z","file":[{"checksum":"1a683353d46c5841c8bb2ee0a56ac7be","date_updated":"2020-07-14T12:48:06Z","relation":"main_file","creator":"sfreunbe","file_id":"8060","date_created":"2020-06-29T16:36:01Z","file_size":8525678,"access_level":"open_access","file_name":"ChemRev_final.pdf","content_type":"application/pdf"}],"type":"journal_article","language":[{"iso":"eng"}],"intvolume":"       120","_id":"7985","publication_identifier":{"issn":["0009-2665"],"eissn":["1520-6890"]},"issue":"14","publisher":"American Chemical Society","department":[{"_id":"StFr"}],"quality_controlled":"1","author":[{"first_name":"WJ","full_name":"Kwak, WJ","last_name":"Kwak"},{"full_name":"Sharon, D","first_name":"D","last_name":"Sharon"},{"first_name":"C","full_name":"Xia, C","last_name":"Xia"},{"last_name":"Kim","first_name":"H","full_name":"Kim, H"},{"last_name":"Johnson","full_name":"Johnson, LR","first_name":"LR"},{"last_name":"Bruce","full_name":"Bruce, PG","first_name":"PG"},{"first_name":"LF","full_name":"Nazar, LF","last_name":"Nazar"},{"last_name":"Sun","first_name":"YK","full_name":"Sun, YK"},{"last_name":"Frimer","full_name":"Frimer, AA","first_name":"AA"},{"last_name":"Noked","first_name":"M","full_name":"Noked, M"},{"first_name":"Stefan Alexander","full_name":"Freunberger, Stefan Alexander","last_name":"Freunberger","id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","orcid":"0000-0003-2902-5319"},{"first_name":"D","full_name":"Aurbach, D","last_name":"Aurbach"}],"file_date_updated":"2020-07-14T12:48:06Z","oa":1,"ddc":["540"],"date_published":"2020-03-05T00:00:00Z","acknowledgement":"S.A.F. is indebted to the European Research Council (ERC) under the European Union’s\r\nHorizon 2020 research and innovation programme (grant agreement No 636069).","isi":1,"publication":"Chemical Reviews","volume":120,"date_updated":"2023-09-05T12:04:28Z","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","scopus_import":"1","day":"05","year":"2020","has_accepted_license":"1","page":"6626-6683","publication_status":"published","doi":"10.1021/acs.chemrev.9b00609","abstract":[{"lang":"eng","text":"The goal of limiting global warming to 1.5 °C requires a drastic reduction in CO2 emissions across many sectors of the world economy. Batteries are vital to this endeavor, whether used in electric vehicles, to store renewable electricity, or in aviation. Present lithium-ion technologies are preparing the public for this inevitable change, but their maximum theoretical specific capacity presents a limitation. Their high cost is another concern for commercial viability. Metal–air batteries have the highest theoretical energy density of all possible secondary battery technologies and could yield step changes in energy storage, if their practical difficulties could be overcome. The scope of this review is to provide an objective, comprehensive, and authoritative assessment of the intensive work invested in nonaqueous rechargeable metal–air batteries over the past few years, which identified the key problems and guides directions to solve them. We focus primarily on the challenges and outlook for Li–O2 cells but include Na–O2, K–O2, and Mg–O2 cells for comparison. Our review highlights the interdisciplinary nature of this field that involves a combination of materials chemistry, electrochemistry, computation, microscopy, spectroscopy, and surface science. The mechanisms of O2 reduction and evolution are considered in the light of recent findings, along with developments in positive and negative electrodes, electrolytes, electrocatalysis on surfaces and in solution, and the degradative effect of singlet oxygen, which is typically formed in Li–O2 cells."}],"pmid":1,"oa_version":"Submitted Version","citation":{"mla":"Kwak, WJ, et al. “Lithium-Oxygen Batteries and Related Systems: Potential, Status, and Future.” <i>Chemical Reviews</i>, vol. 120, no. 14, American Chemical Society, 2020, pp. 6626–83, doi:<a href=\"https://doi.org/10.1021/acs.chemrev.9b00609\">10.1021/acs.chemrev.9b00609</a>.","chicago":"Kwak, WJ, D Sharon, C Xia, H Kim, LR Johnson, PG Bruce, LF Nazar, et al. “Lithium-Oxygen Batteries and Related Systems: Potential, Status, and Future.” <i>Chemical Reviews</i>. American Chemical Society, 2020. <a href=\"https://doi.org/10.1021/acs.chemrev.9b00609\">https://doi.org/10.1021/acs.chemrev.9b00609</a>.","apa":"Kwak, W., Sharon, D., Xia, C., Kim, H., Johnson, L., Bruce, P., … Aurbach, D. (2020). Lithium-oxygen batteries and related systems: Potential, status, and future. <i>Chemical Reviews</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acs.chemrev.9b00609\">https://doi.org/10.1021/acs.chemrev.9b00609</a>","ista":"Kwak W, Sharon D, Xia C, Kim H, Johnson L, Bruce P, Nazar L, Sun Y, Frimer A, Noked M, Freunberger SA, Aurbach D. 2020. Lithium-oxygen batteries and related systems: Potential, status, and future. Chemical Reviews. 120(14), 6626–6683.","ama":"Kwak W, Sharon D, Xia C, et al. Lithium-oxygen batteries and related systems: Potential, status, and future. <i>Chemical Reviews</i>. 2020;120(14):6626-6683. doi:<a href=\"https://doi.org/10.1021/acs.chemrev.9b00609\">10.1021/acs.chemrev.9b00609</a>","short":"W. Kwak, D. Sharon, C. Xia, H. Kim, L. Johnson, P. Bruce, L. Nazar, Y. Sun, A. Frimer, M. Noked, S.A. Freunberger, D. Aurbach, Chemical Reviews 120 (2020) 6626–6683.","ieee":"W. Kwak <i>et al.</i>, “Lithium-oxygen batteries and related systems: Potential, status, and future,” <i>Chemical Reviews</i>, vol. 120, no. 14. American Chemical Society, pp. 6626–6683, 2020."},"month":"03","status":"public"},{"scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","has_accepted_license":"1","year":"2020","conference":{"end_date":"2020-06-26","start_date":"2020-06-22","name":"SoCG: Symposium on Computational Geometry","location":"Zürich, Switzerland"},"day":"01","publication":"36th International Symposium on Computational Geometry","ddc":["510"],"date_published":"2020-06-01T00:00:00Z","arxiv":1,"file_date_updated":"2020-07-14T12:48:06Z","oa":1,"date_updated":"2025-07-10T11:54:54Z","volume":164,"citation":{"chicago":"Patakova, Zuzana. “Bounding Radon Number via Betti Numbers.” In <i>36th International Symposium on Computational Geometry</i>, Vol. 164. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020. <a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.61\">https://doi.org/10.4230/LIPIcs.SoCG.2020.61</a>.","mla":"Patakova, Zuzana. “Bounding Radon Number via Betti Numbers.” <i>36th International Symposium on Computational Geometry</i>, vol. 164, 61:1-61:13, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020, doi:<a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.61\">10.4230/LIPIcs.SoCG.2020.61</a>.","ista":"Patakova Z. 2020. Bounding radon number via Betti numbers. 36th International Symposium on Computational Geometry. SoCG: Symposium on Computational Geometry, LIPIcs, vol. 164, 61:1-61:13.","apa":"Patakova, Z. (2020). Bounding radon number via Betti numbers. In <i>36th International Symposium on Computational Geometry</i> (Vol. 164). Zürich, Switzerland: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.61\">https://doi.org/10.4230/LIPIcs.SoCG.2020.61</a>","ama":"Patakova Z. Bounding radon number via Betti numbers. In: <i>36th International Symposium on Computational Geometry</i>. Vol 164. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2020. doi:<a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.61\">10.4230/LIPIcs.SoCG.2020.61</a>","short":"Z. Patakova, in:, 36th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020.","ieee":"Z. Patakova, “Bounding radon number via Betti numbers,” in <i>36th International Symposium on Computational Geometry</i>, Zürich, Switzerland, 2020, vol. 164."},"oa_version":"Published Version","month":"06","status":"public","publication_status":"published","alternative_title":["LIPIcs"],"doi":"10.4230/LIPIcs.SoCG.2020.61","abstract":[{"lang":"eng","text":"We prove general topological Radon-type theorems for sets in ℝ^d, smooth real manifolds or finite dimensional simplicial complexes. Combined with a recent result of Holmsen and Lee, it gives fractional Helly theorem, and consequently the existence of weak ε-nets as well as a (p,q)-theorem. More precisely: Let X be either ℝ^d, smooth real d-manifold, or a finite d-dimensional simplicial complex. Then if F is a finite, intersection-closed family of sets in X such that the ith reduced Betti number (with ℤ₂ coefficients) of any set in F is at most b for every non-negative integer i less or equal to k, then the Radon number of F is bounded in terms of b and X. Here k is the smallest integer larger or equal to d/2 - 1 if X = ℝ^d; k=d-1 if X is a smooth real d-manifold and not a surface, k=0 if X is a surface and k=d if X is a d-dimensional simplicial complex. Using the recent result of the author and Kalai, we manage to prove the following optimal bound on fractional Helly number for families of open sets in a surface: Let F be a finite family of open sets in a surface S such that the intersection of any subfamily of F is either empty, or path-connected. Then the fractional Helly number of F is at most three. This also settles a conjecture of Holmsen, Kim, and Lee about an existence of a (p,q)-theorem for open subsets of a surface."}],"corr_author":"1","date_created":"2020-06-22T09:14:18Z","file":[{"checksum":"d0996ca5f6eb32ce955ce782b4f2afbe","date_updated":"2020-07-14T12:48:06Z","relation":"main_file","creator":"dernst","date_created":"2020-06-23T06:56:23Z","file_id":"8005","content_type":"application/pdf","file_size":645421,"access_level":"open_access","file_name":"2020_LIPIcsSoCG_Patakova_61.pdf"}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"external_id":{"arxiv":["1908.01677"]},"article_processing_charge":"No","title":"Bounding radon number via Betti numbers","department":[{"_id":"UlWa"}],"publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","author":[{"full_name":"Patakova, Zuzana","first_name":"Zuzana","id":"48B57058-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-3975-1683","last_name":"Patakova"}],"article_number":"61:1-61:13","quality_controlled":"1","_id":"7989","intvolume":"       164","language":[{"iso":"eng"}],"type":"conference","publication_identifier":{"isbn":["9783959771436"],"issn":["1868-8969"]}},{"status":"public","month":"06","related_material":{"record":[{"status":"public","id":"12129","relation":"later_version"}]},"oa_version":"Published Version","citation":{"ieee":"U. Wagner and E. Welzl, “Connectivity of triangulation flip graphs in the plane (Part II: Bistellar flips),” in <i>36th International Symposium on Computational Geometry</i>, Zürich, Switzerland, 2020, vol. 164.","short":"U. Wagner, E. Welzl, in:, 36th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020.","ama":"Wagner U, Welzl E. Connectivity of triangulation flip graphs in the plane (Part II: Bistellar flips). In: <i>36th International Symposium on Computational Geometry</i>. Vol 164. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2020. doi:<a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.67\">10.4230/LIPIcs.SoCG.2020.67</a>","ista":"Wagner U, Welzl E. 2020. Connectivity of triangulation flip graphs in the plane (Part II: Bistellar flips). 36th International Symposium on Computational Geometry. SoCG: Symposium on Computational Geometry, LIPIcs, vol. 164, 67:1-67:16.","apa":"Wagner, U., &#38; Welzl, E. (2020). Connectivity of triangulation flip graphs in the plane (Part II: Bistellar flips). In <i>36th International Symposium on Computational Geometry</i> (Vol. 164). Zürich, Switzerland: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.67\">https://doi.org/10.4230/LIPIcs.SoCG.2020.67</a>","chicago":"Wagner, Uli, and Emo Welzl. “Connectivity of Triangulation Flip Graphs in the Plane (Part II: Bistellar Flips).” In <i>36th International Symposium on Computational Geometry</i>, Vol. 164. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020. <a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.67\">https://doi.org/10.4230/LIPIcs.SoCG.2020.67</a>.","mla":"Wagner, Uli, and Emo Welzl. “Connectivity of Triangulation Flip Graphs in the Plane (Part II: Bistellar Flips).” <i>36th International Symposium on Computational Geometry</i>, vol. 164, 67:1-67:16, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020, doi:<a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.67\">10.4230/LIPIcs.SoCG.2020.67</a>."},"doi":"10.4230/LIPIcs.SoCG.2020.67","alternative_title":["LIPIcs"],"abstract":[{"text":"Given a finite point set P in general position in the plane, a full triangulation is a maximal straight-line embedded plane graph on P. A partial triangulation on P is a full triangulation of some subset P' of P containing all extreme points in P. A bistellar flip on a partial triangulation either flips an edge, removes a non-extreme point of degree 3, or adds a point in P ⧵ P' as vertex of degree 3. The bistellar flip graph has all partial triangulations as vertices, and a pair of partial triangulations is adjacent if they can be obtained from one another by a bistellar flip. The goal of this paper is to investigate the structure of this graph, with emphasis on its connectivity. For sets P of n points in general position, we show that the bistellar flip graph is (n-3)-connected, thereby answering, for sets in general position, an open questions raised in a book (by De Loera, Rambau, and Santos) and a survey (by Lee and Santos) on triangulations. This matches the situation for the subfamily of regular triangulations (i.e., partial triangulations obtained by lifting the points and projecting the lower convex hull), where (n-3)-connectivity has been known since the late 1980s through the secondary polytope (Gelfand, Kapranov, Zelevinsky) and Balinski’s Theorem. Our methods also yield the following results (see the full version [Wagner and Welzl, 2020]): (i) The bistellar flip graph can be covered by graphs of polytopes of dimension n-3 (products of secondary polytopes). (ii) A partial triangulation is regular, if it has distance n-3 in the Hasse diagram of the partial order of partial subdivisions from the trivial subdivision. (iii) All partial triangulations are regular iff the trivial subdivision has height n-3 in the partial order of partial subdivisions. (iv) There are arbitrarily large sets P with non-regular partial triangulations, while every proper subset has only regular triangulations, i.e., there are no small certificates for the existence of non-regular partial triangulations (answering a question by F. Santos in the unexpected direction).","lang":"eng"}],"publication_status":"published","day":"01","year":"2020","conference":{"location":"Zürich, Switzerland","name":"SoCG: Symposium on Computational Geometry","start_date":"2020-06-22","end_date":"2020-06-26"},"has_accepted_license":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","volume":164,"date_updated":"2025-07-10T11:54:56Z","oa":1,"file_date_updated":"2020-07-14T12:48:06Z","ddc":["510"],"arxiv":1,"date_published":"2020-06-01T00:00:00Z","publication":"36th International Symposium on Computational Geometry","quality_controlled":"1","article_number":"67:1 - 67:16","author":[{"full_name":"Wagner, Uli","first_name":"Uli","id":"36690CA2-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-1494-0568","last_name":"Wagner"},{"last_name":"Welzl","full_name":"Welzl, Emo","first_name":"Emo"}],"publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","department":[{"_id":"UlWa"}],"publication_identifier":{"isbn":["9783959771436"],"issn":["1868-8969"]},"type":"conference","language":[{"iso":"eng"}],"intvolume":"       164","_id":"7990","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"date_created":"2020-06-23T06:37:27Z","file_id":"8003","content_type":"application/pdf","file_name":"2020_LIPIcsSoCG_Wagner.pdf","file_size":793187,"access_level":"open_access","creator":"dernst","relation":"main_file","checksum":"3f6925be5f3dcdb3b14cab92f410edf7","date_updated":"2020-07-14T12:48:06Z"}],"date_created":"2020-06-22T09:14:19Z","corr_author":"1","title":"Connectivity of triangulation flip graphs in the plane (Part II: Bistellar flips)","article_processing_charge":"No","external_id":{"arxiv":["2003.13557"]}},{"ddc":["510"],"arxiv":1,"date_published":"2020-06-01T00:00:00Z","file_date_updated":"2020-07-14T12:48:06Z","oa":1,"publication":"36th International Symposium on Computational Geometry","volume":164,"date_updated":"2025-07-10T11:54:56Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","day":"01","has_accepted_license":"1","year":"2020","conference":{"name":"SoCG: Symposium on Computational Geometry","location":"Zürich, Switzerland","end_date":"2020-06-26","start_date":"2020-06-22"},"publication_status":"published","doi":"10.4230/LIPIcs.SoCG.2020.12","alternative_title":["LIPIcs"],"abstract":[{"lang":"eng","text":"We define and study a discrete process that generalizes the convex-layer decomposition of a planar point set. Our process, which we call homotopic curve shortening (HCS), starts with a closed curve (which might self-intersect) in the presence of a set P⊂ ℝ² of point obstacles, and evolves in discrete steps, where each step consists of (1) taking shortcuts around the obstacles, and (2) reducing the curve to its shortest homotopic equivalent. We find experimentally that, if the initial curve is held fixed and P is chosen to be either a very fine regular grid or a uniformly random point set, then HCS behaves at the limit like the affine curve-shortening flow (ACSF). This connection between HCS and ACSF generalizes the link between \"grid peeling\" and the ACSF observed by Eppstein et al. (2017), which applied only to convex curves, and which was studied only for regular grids. We prove that HCS satisfies some properties analogous to those of ACSF: HCS is invariant under affine transformations, preserves convexity, and does not increase the total absolute curvature. Furthermore, the number of self-intersections of a curve, or intersections between two curves (appropriately defined), does not increase. Finally, if the initial curve is simple, then the number of inflection points (appropriately defined) does not increase."}],"citation":{"ista":"Avvakumov S, Nivasch G. 2020. Homotopic curve shortening and the affine curve-shortening flow. 36th International Symposium on Computational Geometry. SoCG: Symposium on Computational Geometry, LIPIcs, vol. 164, 12:1-12:15.","apa":"Avvakumov, S., &#38; Nivasch, G. (2020). Homotopic curve shortening and the affine curve-shortening flow. In <i>36th International Symposium on Computational Geometry</i> (Vol. 164). Zürich, Switzerland: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.12\">https://doi.org/10.4230/LIPIcs.SoCG.2020.12</a>","chicago":"Avvakumov, Sergey, and Gabriel Nivasch. “Homotopic Curve Shortening and the Affine Curve-Shortening Flow.” In <i>36th International Symposium on Computational Geometry</i>, Vol. 164. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020. <a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.12\">https://doi.org/10.4230/LIPIcs.SoCG.2020.12</a>.","mla":"Avvakumov, Sergey, and Gabriel Nivasch. “Homotopic Curve Shortening and the Affine Curve-Shortening Flow.” <i>36th International Symposium on Computational Geometry</i>, vol. 164, 12:1-12:15, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020, doi:<a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.12\">10.4230/LIPIcs.SoCG.2020.12</a>.","ieee":"S. Avvakumov and G. Nivasch, “Homotopic curve shortening and the affine curve-shortening flow,” in <i>36th International Symposium on Computational Geometry</i>, Zürich, Switzerland, 2020, vol. 164.","short":"S. Avvakumov, G. Nivasch, in:, 36th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020.","ama":"Avvakumov S, Nivasch G. Homotopic curve shortening and the affine curve-shortening flow. In: <i>36th International Symposium on Computational Geometry</i>. Vol 164. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2020. doi:<a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.12\">10.4230/LIPIcs.SoCG.2020.12</a>"},"oa_version":"Published Version","status":"public","month":"06","external_id":{"arxiv":["1909.00263"]},"article_processing_charge":"No","title":"Homotopic curve shortening and the affine curve-shortening flow","date_created":"2020-06-22T09:14:19Z","license":"https://creativecommons.org/licenses/by/3.0/","tmp":{"short":"CC BY (3.0)","name":"Creative Commons Attribution 3.0 Unported (CC BY 3.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/3.0/legalcode"},"file":[{"date_updated":"2020-07-14T12:48:06Z","checksum":"6872df6549142f709fb6354a1b2f2c06","relation":"main_file","creator":"dernst","file_size":575896,"file_name":"2020_LIPIcsSoCG_Avvakumov.pdf","access_level":"open_access","content_type":"application/pdf","file_id":"8007","date_created":"2020-06-23T11:13:49Z"}],"language":[{"iso":"eng"}],"type":"conference","_id":"7991","intvolume":"       164","publication_identifier":{"issn":["1868-8969"],"isbn":["9783959771436"]},"project":[{"grant_number":"P31312","_id":"26611F5C-B435-11E9-9278-68D0E5697425","name":"Algorithms for Embeddings and Homotopy Theory","call_identifier":"FWF"}],"publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","department":[{"_id":"UlWa"}],"author":[{"id":"3827DAC8-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-7840-5062","last_name":"Avvakumov","full_name":"Avvakumov, Sergey","first_name":"Sergey"},{"last_name":"Nivasch","full_name":"Nivasch, Gabriel","first_name":"Gabriel"}],"quality_controlled":"1","article_number":"12:1 - 12:15"},{"publication_identifier":{"issn":["1868-8969"],"isbn":["9783959771436"]},"language":[{"iso":"eng"}],"type":"conference","_id":"7992","intvolume":"       164","author":[{"first_name":"Zuzana","full_name":"Patakova, Zuzana","last_name":"Patakova","orcid":"0000-0002-3975-1683","id":"48B57058-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Tancer, Martin","first_name":"Martin","id":"38AC689C-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-1191-6714","last_name":"Tancer"},{"first_name":"Uli","full_name":"Wagner, Uli","last_name":"Wagner","orcid":"0000-0002-1494-0568","id":"36690CA2-F248-11E8-B48F-1D18A9856A87"}],"article_number":"62:1 - 62:16","quality_controlled":"1","publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","department":[{"_id":"UlWa"}],"article_processing_charge":"No","title":"Barycentric cuts through a convex body","external_id":{"arxiv":["2003.13536"]},"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"creator":"dernst","file_id":"8004","date_created":"2020-06-23T06:45:52Z","access_level":"open_access","file_name":"2020_LIPIcsSoCG_Patakova.pdf","file_size":750318,"content_type":"application/pdf","checksum":"ce1c9194139a664fb59d1efdfc88eaae","date_updated":"2020-07-14T12:48:06Z","relation":"main_file"}],"date_created":"2020-06-22T09:14:20Z","corr_author":"1","abstract":[{"lang":"eng","text":"Let K be a convex body in ℝⁿ (i.e., a compact convex set with nonempty interior). Given a point p in the interior of K, a hyperplane h passing through p is called barycentric if p is the barycenter of K ∩ h. In 1961, Grünbaum raised the question whether, for every K, there exists an interior point p through which there are at least n+1 distinct barycentric hyperplanes. Two years later, this was seemingly resolved affirmatively by showing that this is the case if p=p₀ is the point of maximal depth in K. However, while working on a related question, we noticed that one of the auxiliary claims in the proof is incorrect. Here, we provide a counterexample; this re-opens Grünbaum’s question. It follows from known results that for n ≥ 2, there are always at least three distinct barycentric cuts through the point p₀ ∈ K of maximal depth. Using tools related to Morse theory we are able to improve this bound: four distinct barycentric cuts through p₀ are guaranteed if n ≥ 3."}],"doi":"10.4230/LIPIcs.SoCG.2020.62","alternative_title":["LIPIcs"],"publication_status":"published","month":"06","status":"public","citation":{"ista":"Patakova Z, Tancer M, Wagner U. 2020. Barycentric cuts through a convex body. 36th International Symposium on Computational Geometry. SoCG: Symposium on Computational Geometry, LIPIcs, vol. 164, 62:1-62:16.","apa":"Patakova, Z., Tancer, M., &#38; Wagner, U. (2020). Barycentric cuts through a convex body. In <i>36th International Symposium on Computational Geometry</i> (Vol. 164). Zürich, Switzerland: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.62\">https://doi.org/10.4230/LIPIcs.SoCG.2020.62</a>","chicago":"Patakova, Zuzana, Martin Tancer, and Uli Wagner. “Barycentric Cuts through a Convex Body.” In <i>36th International Symposium on Computational Geometry</i>, Vol. 164. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020. <a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.62\">https://doi.org/10.4230/LIPIcs.SoCG.2020.62</a>.","mla":"Patakova, Zuzana, et al. “Barycentric Cuts through a Convex Body.” <i>36th International Symposium on Computational Geometry</i>, vol. 164, 62:1-62:16, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020, doi:<a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.62\">10.4230/LIPIcs.SoCG.2020.62</a>.","ieee":"Z. Patakova, M. Tancer, and U. Wagner, “Barycentric cuts through a convex body,” in <i>36th International Symposium on Computational Geometry</i>, Zürich, Switzerland, 2020, vol. 164.","ama":"Patakova Z, Tancer M, Wagner U. Barycentric cuts through a convex body. In: <i>36th International Symposium on Computational Geometry</i>. Vol 164. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2020. doi:<a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.62\">10.4230/LIPIcs.SoCG.2020.62</a>","short":"Z. Patakova, M. Tancer, U. Wagner, in:, 36th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020."},"oa_version":"Published Version","volume":164,"date_updated":"2025-07-10T11:54:57Z","arxiv":1,"ddc":["510"],"date_published":"2020-06-01T00:00:00Z","file_date_updated":"2020-07-14T12:48:06Z","oa":1,"publication":"36th International Symposium on Computational Geometry","day":"01","has_accepted_license":"1","year":"2020","conference":{"start_date":"2020-06-22","end_date":"2020-06-26","location":"Zürich, Switzerland","name":"SoCG: Symposium on Computational Geometry"},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1"},{"publication_status":"published","doi":"10.4230/LIPIcs.SoCG.2020.9","abstract":[{"text":"In the recent study of crossing numbers, drawings of graphs that can be extended to an arrangement of pseudolines (pseudolinear drawings) have played an important role as they are a natural combinatorial extension of rectilinear (or straight-line) drawings. A characterization of the pseudolinear drawings of K_n was found recently. We extend this characterization to all graphs, by describing the set of minimal forbidden subdrawings for pseudolinear drawings. Our characterization also leads to a polynomial-time algorithm to recognize pseudolinear drawings and construct the pseudolines when it is possible.","lang":"eng"}],"alternative_title":["LIPIcs"],"citation":{"ista":"Arroyo Guevara AM, Bensmail J, Bruce Richter R. 2020. Extending drawings of graphs to arrangements of pseudolines. 36th International Symposium on Computational Geometry. SoCG: Symposium on Computational Geometry, LIPIcs, vol. 164, 9:1-9:14.","apa":"Arroyo Guevara, A. M., Bensmail, J., &#38; Bruce Richter, R. (2020). Extending drawings of graphs to arrangements of pseudolines. In <i>36th International Symposium on Computational Geometry</i> (Vol. 164). Zürich, Switzerland: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.9\">https://doi.org/10.4230/LIPIcs.SoCG.2020.9</a>","chicago":"Arroyo Guevara, Alan M, Julien Bensmail, and R. Bruce Richter. “Extending Drawings of Graphs to Arrangements of Pseudolines.” In <i>36th International Symposium on Computational Geometry</i>, Vol. 164. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020. <a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.9\">https://doi.org/10.4230/LIPIcs.SoCG.2020.9</a>.","mla":"Arroyo Guevara, Alan M., et al. “Extending Drawings of Graphs to Arrangements of Pseudolines.” <i>36th International Symposium on Computational Geometry</i>, vol. 164, 9:1-9:14, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020, doi:<a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.9\">10.4230/LIPIcs.SoCG.2020.9</a>.","ieee":"A. M. Arroyo Guevara, J. Bensmail, and R. Bruce Richter, “Extending drawings of graphs to arrangements of pseudolines,” in <i>36th International Symposium on Computational Geometry</i>, Zürich, Switzerland, 2020, vol. 164.","short":"A.M. Arroyo Guevara, J. Bensmail, R. Bruce Richter, in:, 36th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020.","ama":"Arroyo Guevara AM, Bensmail J, Bruce Richter R. Extending drawings of graphs to arrangements of pseudolines. In: <i>36th International Symposium on Computational Geometry</i>. Vol 164. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2020. doi:<a href=\"https://doi.org/10.4230/LIPIcs.SoCG.2020.9\">10.4230/LIPIcs.SoCG.2020.9</a>"},"oa_version":"Published Version","status":"public","month":"06","arxiv":1,"date_published":"2020-06-01T00:00:00Z","ddc":["510"],"oa":1,"file_date_updated":"2020-07-14T12:48:06Z","publication":"36th International Symposium on Computational Geometry","volume":164,"date_updated":"2025-07-10T11:54:58Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","day":"01","has_accepted_license":"1","year":"2020","conference":{"name":"SoCG: Symposium on Computational Geometry","location":"Zürich, Switzerland","end_date":"2020-06-26","start_date":"2020-06-22"},"language":[{"iso":"eng"}],"type":"conference","_id":"7994","intvolume":"       164","ec_funded":1,"publication_identifier":{"isbn":["9783959771436"],"issn":["1868-8969"]},"project":[{"call_identifier":"H2020","name":"ISTplus - Postdoctoral Fellowships","grant_number":"754411","_id":"260C2330-B435-11E9-9278-68D0E5697425"}],"department":[{"_id":"UlWa"}],"publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","author":[{"orcid":"0000-0003-2401-8670","id":"3207FDC6-F248-11E8-B48F-1D18A9856A87","last_name":"Arroyo Guevara","full_name":"Arroyo Guevara, Alan M","first_name":"Alan M"},{"first_name":"Julien","full_name":"Bensmail, Julien","last_name":"Bensmail"},{"first_name":"R.","full_name":"Bruce Richter, R.","last_name":"Bruce Richter"}],"quality_controlled":"1","article_number":"9:1 - 9:14","external_id":{"arxiv":["1804.09317"]},"article_processing_charge":"No","title":"Extending drawings of graphs to arrangements of pseudolines","date_created":"2020-06-22T09:14:21Z","corr_author":"1","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"date_created":"2020-06-23T11:06:23Z","file_id":"8006","content_type":"application/pdf","access_level":"open_access","file_size":592661,"file_name":"2020_LIPIcsSoCG_Arroyo.pdf","creator":"dernst","relation":"main_file","checksum":"93571b76cf97d5b7c8aabaeaa694dd7e","date_updated":"2020-07-14T12:48:06Z"}]},{"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","day":"01","has_accepted_license":"1","year":"2020","ddc":["570"],"date_published":"2020-07-01T00:00:00Z","oa":1,"file_date_updated":"2020-11-25T10:49:48Z","isi":1,"publication":"Evolution","acknowledgement":"We are very grateful to I. Sencic, L. Brettell, A.‐L. Liabot, J. Galindo, M. Ravinet, and A. Butlin for their help with field sampling and mating experiments. This work was funded by the Natural Environment Research Council, European Research Council and Swedish Research Council VR and we are also very grateful for the support of the Linnaeus Centre for Marine Evolutionary Biology at the University of Gothenburg. The simulations were performed on resources at Chalmers Centre for Computational Science and Engineering (C3SE) provided by the Swedish National Infrastructure for Computing (SNIC). AMW was funded by the European Union's Horizon 2020 research and innovation program under Marie Skłodowska‐Curie grant agreement no. 797747.","volume":74,"date_updated":"2025-07-10T11:54:58Z","citation":{"short":"S. Perini, M. Rafajlović, A.M. Westram, K. Johannesson, R.K. Butlin, Evolution 74 (2020) 1482–1497.","ama":"Perini S, Rafajlović M, Westram AM, Johannesson K, Butlin RK. Assortative mating, sexual selection, and their consequences for gene flow in Littorina. <i>Evolution</i>. 2020;74(7):1482-1497. doi:<a href=\"https://doi.org/10.1111/evo.14027\">10.1111/evo.14027</a>","ieee":"S. Perini, M. Rafajlović, A. M. Westram, K. Johannesson, and R. K. Butlin, “Assortative mating, sexual selection, and their consequences for gene flow in Littorina,” <i>Evolution</i>, vol. 74, no. 7. Wiley, pp. 1482–1497, 2020.","chicago":"Perini, Samuel, Marina Rafajlović, Anja M Westram, Kerstin Johannesson, and Roger K. Butlin. “Assortative Mating, Sexual Selection, and Their Consequences for Gene Flow in Littorina.” <i>Evolution</i>. Wiley, 2020. <a href=\"https://doi.org/10.1111/evo.14027\">https://doi.org/10.1111/evo.14027</a>.","mla":"Perini, Samuel, et al. “Assortative Mating, Sexual Selection, and Their Consequences for Gene Flow in Littorina.” <i>Evolution</i>, vol. 74, no. 7, Wiley, 2020, pp. 1482–97, doi:<a href=\"https://doi.org/10.1111/evo.14027\">10.1111/evo.14027</a>.","ista":"Perini S, Rafajlović M, Westram AM, Johannesson K, Butlin RK. 2020. Assortative mating, sexual selection, and their consequences for gene flow in Littorina. Evolution. 74(7), 1482–1497.","apa":"Perini, S., Rafajlović, M., Westram, A. M., Johannesson, K., &#38; Butlin, R. K. (2020). Assortative mating, sexual selection, and their consequences for gene flow in Littorina. <i>Evolution</i>. Wiley. <a href=\"https://doi.org/10.1111/evo.14027\">https://doi.org/10.1111/evo.14027</a>"},"oa_version":"Published Version","month":"07","status":"public","related_material":{"record":[{"relation":"research_data","status":"public","id":"8809"}]},"page":"1482-1497","publication_status":"published","abstract":[{"lang":"eng","text":"When divergent populations are connected by gene flow, the establishment of complete reproductive isolation usually requires the joint action of multiple barrier effects. One example where multiple barrier effects are coupled consists of a single trait that is under divergent natural selection and also mediates assortative mating. Such multiple‐effect traits can strongly reduce gene flow. However, there are few cases where patterns of assortative mating have been described quantitatively and their impact on gene flow has been determined. Two ecotypes of the coastal marine snail, Littorina saxatilis , occur in North Atlantic rocky‐shore habitats dominated by either crab predation or wave action. There is evidence for divergent natural selection acting on size, and size‐assortative mating has previously been documented. Here, we analyze the mating pattern in L. saxatilis with respect to size in intensively sampled transects across boundaries between the habitats. We show that the mating pattern is mostly conserved between ecotypes and that it generates both assortment and directional sexual selection for small male size. Using simulations, we show that the mating pattern can contribute to reproductive isolation between ecotypes but the barrier to gene flow is likely strengthened more by sexual selection than by assortment."}],"doi":"10.1111/evo.14027","date_created":"2020-06-22T09:14:21Z","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"relation":"main_file","checksum":"56235bf1e2a9e25f96196bb13b6b754d","date_updated":"2020-11-25T10:49:48Z","date_created":"2020-11-25T10:49:48Z","file_id":"8808","success":1,"content_type":"application/pdf","file_size":1080810,"access_level":"open_access","file_name":"2020_Evolution_Perini.pdf","creator":"dernst"}],"article_type":"original","external_id":{"isi":["000539780800001"]},"article_processing_charge":"No","title":"Assortative mating, sexual selection, and their consequences for gene flow in Littorina","issue":"7","publisher":"Wiley","department":[{"_id":"NiBa"}],"author":[{"last_name":"Perini","full_name":"Perini, Samuel","first_name":"Samuel"},{"first_name":"Marina","full_name":"Rafajlović, Marina","last_name":"Rafajlović"},{"orcid":"0000-0003-1050-4969","id":"3C147470-F248-11E8-B48F-1D18A9856A87","last_name":"Westram","full_name":"Westram, Anja M","first_name":"Anja M"},{"last_name":"Johannesson","full_name":"Johannesson, Kerstin","first_name":"Kerstin"},{"first_name":"Roger K.","full_name":"Butlin, Roger K.","last_name":"Butlin"}],"quality_controlled":"1","language":[{"iso":"eng"}],"type":"journal_article","_id":"7995","ec_funded":1,"intvolume":"        74","publication_identifier":{"issn":["0014-3820"],"eissn":["1558-5646"]},"project":[{"name":"Theoretical and empirical approaches to understanding Parallel Adaptation","call_identifier":"H2020","grant_number":"797747","_id":"265B41B8-B435-11E9-9278-68D0E5697425"}]},{"article_processing_charge":"No","title":"Bayesian reassessment of the epigenetic architecture of complex traits","article_type":"original","external_id":{"isi":["000541702400004"],"pmid":["32513961"]},"file":[{"date_updated":"2020-07-14T12:48:07Z","checksum":"4c96babd4cfb0d153334f6c598c0bacb","relation":"main_file","creator":"dernst","content_type":"application/pdf","file_name":"2020_NatureComm_Bayesian.pdf","file_size":1475657,"access_level":"open_access","date_created":"2020-06-22T11:24:32Z","file_id":"8000"}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"corr_author":"1","date_created":"2020-06-22T11:18:25Z","publication_identifier":{"issn":["2041-1723"]},"_id":"7999","intvolume":"        11","language":[{"iso":"eng"}],"type":"journal_article","author":[{"last_name":"Trejo Banos","first_name":"D","full_name":"Trejo Banos, D"},{"first_name":"DL","full_name":"McCartney, DL","last_name":"McCartney"},{"last_name":"Patxot","full_name":"Patxot, M","first_name":"M"},{"first_name":"L","full_name":"Anchieri, L","last_name":"Anchieri"},{"full_name":"Battram, T","first_name":"T","last_name":"Battram"},{"full_name":"Christiansen, C","first_name":"C","last_name":"Christiansen"},{"last_name":"Costeira","first_name":"R","full_name":"Costeira, R"},{"last_name":"Walker","first_name":"RM","full_name":"Walker, RM"},{"last_name":"Morris","first_name":"SW","full_name":"Morris, SW"},{"full_name":"Campbell, A","first_name":"A","last_name":"Campbell"},{"full_name":"Zhang, Q","first_name":"Q","last_name":"Zhang"},{"first_name":"DJ","full_name":"Porteous, DJ","last_name":"Porteous"},{"last_name":"McRae","full_name":"McRae, AF","first_name":"AF"},{"last_name":"Wray","full_name":"Wray, NR","first_name":"NR"},{"last_name":"Visscher","full_name":"Visscher, PM","first_name":"PM"},{"last_name":"Haley","full_name":"Haley, CS","first_name":"CS"},{"last_name":"Evans","full_name":"Evans, KL","first_name":"KL"},{"first_name":"IJ","full_name":"Deary, IJ","last_name":"Deary"},{"last_name":"McIntosh","first_name":"AM","full_name":"McIntosh, AM"},{"full_name":"Hemani, G","first_name":"G","last_name":"Hemani"},{"last_name":"Bell","full_name":"Bell, JT","first_name":"JT"},{"first_name":"RE","full_name":"Marioni, RE","last_name":"Marioni"},{"full_name":"Robinson, Matthew Richard","first_name":"Matthew Richard","id":"E5D42276-F5DA-11E9-8E24-6303E6697425","orcid":"0000-0001-8982-8813","last_name":"Robinson"}],"quality_controlled":"1","article_number":"2865","publisher":"Springer Nature","department":[{"_id":"MaRo"}],"date_updated":"2024-10-09T20:59:38Z","volume":11,"publication":"Nature Communications","isi":1,"ddc":["570"],"date_published":"2020-06-08T00:00:00Z","oa":1,"file_date_updated":"2020-07-14T12:48:07Z","has_accepted_license":"1","year":"2020","day":"08","scopus_import":"1","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","doi":"10.1038/s41467-020-16520-1","abstract":[{"lang":"eng","text":"Linking epigenetic marks to clinical outcomes improves insight into molecular processes, disease prediction, and therapeutic target identification. Here, a statistical approach is presented to infer the epigenetic architecture of complex disease, determine the variation captured by epigenetic effects, and estimate phenotype-epigenetic probe associations jointly. Implicitly adjusting for probe correlations, data structure (cell-count or relatedness), and single-nucleotide polymorphism (SNP) marker effects, improves association estimates and in 9,448 individuals, 75.7% (95% CI 71.70–79.3) of body mass index (BMI) variation and 45.6% (95% CI 37.3–51.9) of cigarette consumption variation was captured by whole blood methylation array data. Pathway-linked probes of blood cholesterol, lipid transport and sterol metabolism for BMI, and xenobiotic stimuli response for smoking, showed >1.5 times larger associations with >95% posterior inclusion probability. Prediction accuracy improved by 28.7% for BMI and 10.2% for smoking over a LASSO model, with age-, and tissue-specificity, implying associations are a phenotypic consequence rather than causal. "}],"publication_status":"published","related_material":{"link":[{"url":"https://doi.org/10.1038/s41467-020-19099-9","relation":"erratum"}]},"status":"public","month":"06","citation":{"ieee":"D. Trejo Banos <i>et al.</i>, “Bayesian reassessment of the epigenetic architecture of complex traits,” <i>Nature Communications</i>, vol. 11. Springer Nature, 2020.","short":"D. Trejo Banos, D. McCartney, M. Patxot, L. Anchieri, T. Battram, C. Christiansen, R. Costeira, R. Walker, S. Morris, A. Campbell, Q. Zhang, D. Porteous, A. McRae, N. Wray, P. Visscher, C. Haley, K. Evans, I. Deary, A. McIntosh, G. Hemani, J. Bell, R. Marioni, M.R. Robinson, Nature Communications 11 (2020).","ama":"Trejo Banos D, McCartney D, Patxot M, et al. Bayesian reassessment of the epigenetic architecture of complex traits. <i>Nature Communications</i>. 2020;11. doi:<a href=\"https://doi.org/10.1038/s41467-020-16520-1\">10.1038/s41467-020-16520-1</a>","apa":"Trejo Banos, D., McCartney, D., Patxot, M., Anchieri, L., Battram, T., Christiansen, C., … Robinson, M. R. (2020). Bayesian reassessment of the epigenetic architecture of complex traits. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-020-16520-1\">https://doi.org/10.1038/s41467-020-16520-1</a>","ista":"Trejo Banos D, McCartney D, Patxot M, Anchieri L, Battram T, Christiansen C, Costeira R, Walker R, Morris S, Campbell A, Zhang Q, Porteous D, McRae A, Wray N, Visscher P, Haley C, Evans K, Deary I, McIntosh A, Hemani G, Bell J, Marioni R, Robinson MR. 2020. Bayesian reassessment of the epigenetic architecture of complex traits. Nature Communications. 11, 2865.","mla":"Trejo Banos, D., et al. “Bayesian Reassessment of the Epigenetic Architecture of Complex Traits.” <i>Nature Communications</i>, vol. 11, 2865, Springer Nature, 2020, doi:<a href=\"https://doi.org/10.1038/s41467-020-16520-1\">10.1038/s41467-020-16520-1</a>.","chicago":"Trejo Banos, D, DL McCartney, M Patxot, L Anchieri, T Battram, C Christiansen, R Costeira, et al. “Bayesian Reassessment of the Epigenetic Architecture of Complex Traits.” <i>Nature Communications</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1038/s41467-020-16520-1\">https://doi.org/10.1038/s41467-020-16520-1</a>."},"oa_version":"Published Version","pmid":1},{"abstract":[{"lang":"eng","text":"Post-tetanic potentiation (PTP) is an attractive candidate mechanism for hippocampus-dependent short-term memory. Although PTP has a uniquely large magnitude at hippocampal mossy fiber-CA3 pyramidal neuron synapses, it is unclear whether it can be induced by natural activity and whether its lifetime is sufficient to support short-term memory. We combined in vivo recordings from granule cells (GCs), in vitro paired recordings from mossy fiber terminals and postsynaptic CA3 neurons, and “flash and freeze” electron microscopy. PTP was induced at single synapses and showed a low induction threshold adapted to sparse GC activity in vivo. PTP was mainly generated by enlargement of the readily releasable pool of synaptic vesicles, allowing multiplicative interaction with other plasticity forms. PTP was associated with an increase in the docked vesicle pool, suggesting formation of structural “pool engrams.” Absence of presynaptic activity extended the lifetime of the potentiation, enabling prolonged information storage in the hippocampal network."}],"doi":"10.1016/j.neuron.2020.05.013","page":"509-521","publication_status":"published","related_material":{"link":[{"description":"News on IST Homepage","relation":"press_release","url":"https://ist.ac.at/en/news/possible-physical-trace-of-short-term-memory-found/"}]},"month":"08","status":"public","oa_version":"Published Version","citation":{"mla":"Vandael, David H., et al. “Short-Term Plasticity at Hippocampal Mossy Fiber Synapses Is Induced by Natural Activity Patterns and Associated with Vesicle Pool Engram Formation.” <i>Neuron</i>, vol. 107, no. 3, Elsevier, 2020, pp. 509–21, doi:<a href=\"https://doi.org/10.1016/j.neuron.2020.05.013\">10.1016/j.neuron.2020.05.013</a>.","chicago":"Vandael, David H, Carolina Borges Merjane, Xiaomin Zhang, and Peter M Jonas. “Short-Term Plasticity at Hippocampal Mossy Fiber Synapses Is Induced by Natural Activity Patterns and Associated with Vesicle Pool Engram Formation.” <i>Neuron</i>. Elsevier, 2020. <a href=\"https://doi.org/10.1016/j.neuron.2020.05.013\">https://doi.org/10.1016/j.neuron.2020.05.013</a>.","apa":"Vandael, D. H., Borges Merjane, C., Zhang, X., &#38; Jonas, P. M. (2020). Short-term plasticity at hippocampal mossy fiber synapses is induced by natural activity patterns and associated with vesicle pool engram formation. <i>Neuron</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.neuron.2020.05.013\">https://doi.org/10.1016/j.neuron.2020.05.013</a>","ista":"Vandael DH, Borges Merjane C, Zhang X, Jonas PM. 2020. Short-term plasticity at hippocampal mossy fiber synapses is induced by natural activity patterns and associated with vesicle pool engram formation. Neuron. 107(3), 509–521.","ama":"Vandael DH, Borges Merjane C, Zhang X, Jonas PM. Short-term plasticity at hippocampal mossy fiber synapses is induced by natural activity patterns and associated with vesicle pool engram formation. <i>Neuron</i>. 2020;107(3):509-521. doi:<a href=\"https://doi.org/10.1016/j.neuron.2020.05.013\">10.1016/j.neuron.2020.05.013</a>","short":"D.H. Vandael, C. Borges Merjane, X. Zhang, P.M. Jonas, Neuron 107 (2020) 509–521.","ieee":"D. H. Vandael, C. Borges Merjane, X. Zhang, and P. M. Jonas, “Short-term plasticity at hippocampal mossy fiber synapses is induced by natural activity patterns and associated with vesicle pool engram formation,” <i>Neuron</i>, vol. 107, no. 3. Elsevier, pp. 509–521, 2020."},"pmid":1,"date_updated":"2025-04-15T08:29:09Z","volume":107,"acknowledgement":"This project received funding from the European Research Council (ERC) under the European Union Horizon 2020 Research and Innovation Program (grant agreement 692692 to P.J.) and the Fond zur Förderung der Wissenschaftlichen Forschung ( Z 312-B27 , Wittgenstein award to P.J. and V 739-B27 to C.B.-M.). We thank Drs. Jozsef Csicsvari, Jose Guzman, Erwin Neher, and Ryuichi Shigemoto for commenting on earlier versions of the manuscript. We are grateful to Walter Kaufmann, Daniel Gütl, and Vanessa Zheden for EM training; Alois Schlögl for programming; Florian Marr for excellent technical assistance and cell reconstruction; Christina Altmutter for technical help; Eleftheria Kralli-Beller for manuscript editing; Taija Makinen for providing the Prox1-CreERT2 mouse line; and the Scientific Service Units of IST Austria for support.","isi":1,"publication":"Neuron","oa":1,"file_date_updated":"2020-11-25T11:23:02Z","date_published":"2020-08-05T00:00:00Z","ddc":["570"],"year":"2020","has_accepted_license":"1","day":"05","scopus_import":"1","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","project":[{"grant_number":"692692","_id":"25B7EB9E-B435-11E9-9278-68D0E5697425","name":"Biophysics and circuit function of a giant cortical glutamatergic synapse","call_identifier":"H2020"},{"grant_number":"Z00312","_id":"25C5A090-B435-11E9-9278-68D0E5697425","name":"Synaptic communication in neuronal microcircuits","call_identifier":"FWF"},{"name":"Structural plasticity at mossy fiber-CA3 synapses","call_identifier":"FWF","grant_number":"V00739","_id":"2696E7FE-B435-11E9-9278-68D0E5697425"}],"publication_identifier":{"eissn":["10974199"],"issn":["0896-6273"]},"ec_funded":1,"intvolume":"       107","_id":"8001","acknowledged_ssus":[{"_id":"SSU"}],"type":"journal_article","language":[{"iso":"eng"}],"quality_controlled":"1","author":[{"last_name":"Vandael","orcid":"0000-0001-7577-1676","id":"3AE48E0A-F248-11E8-B48F-1D18A9856A87","first_name":"David H","full_name":"Vandael, David H"},{"first_name":"Carolina","full_name":"Borges Merjane, Carolina","last_name":"Borges Merjane","orcid":"0000-0003-0005-401X","id":"4305C450-F248-11E8-B48F-1D18A9856A87"},{"id":"423EC9C2-F248-11E8-B48F-1D18A9856A87","last_name":"Zhang","full_name":"Zhang, Xiaomin","first_name":"Xiaomin"},{"first_name":"Peter M","full_name":"Jonas, Peter M","last_name":"Jonas","id":"353C1B58-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5001-4804"}],"department":[{"_id":"PeJo"}],"publisher":"Elsevier","issue":"3","title":"Short-term plasticity at hippocampal mossy fiber synapses is induced by natural activity patterns and associated with vesicle pool engram formation","article_processing_charge":"No","external_id":{"pmid":["32492366"],"isi":["000556135600004"]},"article_type":"original","file":[{"success":1,"file_id":"8811","date_created":"2020-11-25T11:23:02Z","file_size":4390833,"access_level":"open_access","file_name":"2020_Neuron_Vandael.pdf","content_type":"application/pdf","creator":"dernst","relation":"main_file","checksum":"4030b2be0c9625d54694a1e9fb00305e","date_updated":"2020-11-25T11:23:02Z"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","image":"/images/cc_by_nc_nd.png","short":"CC BY-NC-ND (4.0)","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)"},"corr_author":"1","date_created":"2020-06-22T13:29:05Z"},{"doi":"10.1103/physrevresearch.2.022065","abstract":[{"text":"Relaxation to a thermal state is the inevitable fate of nonequilibrium interacting quantum systems without special conservation laws. While thermalization in one-dimensional systems can often be suppressed by integrability mechanisms, in two spatial dimensions thermalization is expected to be far more effective due to the increased phase space. In this work we propose a general framework for escaping or delaying the emergence of the thermal state in two-dimensional arrays of Rydberg atoms via the mechanism of quantum scars, i.e., initial states that fail to thermalize. The suppression of thermalization is achieved in two complementary ways: by adding local perturbations or by adjusting the driving Rabi frequency according to the local connectivity of the lattice. We demonstrate that these mechanisms allow us to realize robust quantum scars in various two-dimensional lattices, including decorated lattices with nonconstant connectivity. In particular, we show that a small decrease of the Rabi frequency at the corners of the lattice is crucial for mitigating the strong boundary effects in two-dimensional systems. Our results identify synchronization as an important tool for future experiments on two-dimensional quantum scars.","lang":"eng"}],"publication_status":"published","month":"06","status":"public","oa_version":"Published Version","citation":{"ieee":"A. Michailidis, C. J. Turner, Z. Papić, D. A. Abanin, and M. Serbyn, “Stabilizing two-dimensional quantum scars by deformation and synchronization,” <i>Physical Review Research</i>, vol. 2, no. 2. American Physical Society, 2020.","ama":"Michailidis A, Turner CJ, Papić Z, Abanin DA, Serbyn M. Stabilizing two-dimensional quantum scars by deformation and synchronization. <i>Physical Review Research</i>. 2020;2(2). doi:<a href=\"https://doi.org/10.1103/physrevresearch.2.022065\">10.1103/physrevresearch.2.022065</a>","short":"A. Michailidis, C.J. Turner, Z. Papić, D.A. Abanin, M. Serbyn, Physical Review Research 2 (2020).","apa":"Michailidis, A., Turner, C. J., Papić, Z., Abanin, D. A., &#38; Serbyn, M. (2020). Stabilizing two-dimensional quantum scars by deformation and synchronization. <i>Physical Review Research</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevresearch.2.022065\">https://doi.org/10.1103/physrevresearch.2.022065</a>","ista":"Michailidis A, Turner CJ, Papić Z, Abanin DA, Serbyn M. 2020. Stabilizing two-dimensional quantum scars by deformation and synchronization. Physical Review Research. 2(2), 022065.","mla":"Michailidis, Alexios, et al. “Stabilizing Two-Dimensional Quantum Scars by Deformation and Synchronization.” <i>Physical Review Research</i>, vol. 2, no. 2, 022065, American Physical Society, 2020, doi:<a href=\"https://doi.org/10.1103/physrevresearch.2.022065\">10.1103/physrevresearch.2.022065</a>.","chicago":"Michailidis, Alexios, C. J. Turner, Z. Papić, D. A. Abanin, and Maksym Serbyn. “Stabilizing Two-Dimensional Quantum Scars by Deformation and Synchronization.” <i>Physical Review Research</i>. American Physical Society, 2020. <a href=\"https://doi.org/10.1103/physrevresearch.2.022065\">https://doi.org/10.1103/physrevresearch.2.022065</a>."},"volume":2,"date_updated":"2024-10-21T06:02:23Z","oa":1,"file_date_updated":"2020-07-14T12:48:08Z","date_published":"2020-06-22T00:00:00Z","ddc":["530"],"publication":"Physical Review Research","day":"22","year":"2020","has_accepted_license":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","scopus_import":"1","publication_identifier":{"issn":["2643-1564"]},"project":[{"name":"Non-Ergodic Quantum Matter: Universality, Dynamics and Control","call_identifier":"H2020","grant_number":"850899","_id":"23841C26-32DE-11EA-91FC-C7463DDC885E"}],"type":"journal_article","language":[{"iso":"eng"}],"ec_funded":1,"intvolume":"         2","_id":"8011","article_number":"022065","quality_controlled":"1","author":[{"id":"36EBAD38-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8443-1064","last_name":"Michailidis","full_name":"Michailidis, Alexios","first_name":"Alexios"},{"last_name":"Turner","full_name":"Turner, C. J.","first_name":"C. J."},{"full_name":"Papić, Z.","first_name":"Z.","last_name":"Papić"},{"full_name":"Abanin, D. A.","first_name":"D. A.","last_name":"Abanin"},{"last_name":"Serbyn","orcid":"0000-0002-2399-5827","id":"47809E7E-F248-11E8-B48F-1D18A9856A87","first_name":"Maksym","full_name":"Serbyn, Maksym"}],"issue":"2","department":[{"_id":"MaSe"}],"publisher":"American Physical Society","title":"Stabilizing two-dimensional quantum scars by deformation and synchronization","article_processing_charge":"No","article_type":"original","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"checksum":"e6959dc8220f14a008d1933858795e6d","date_updated":"2020-07-14T12:48:08Z","relation":"main_file","creator":"dernst","file_id":"8050","date_created":"2020-06-29T14:41:27Z","access_level":"open_access","file_name":"2020_PhysicalReviewResearch_Michailidis.pdf","file_size":2066011,"content_type":"application/pdf"}],"date_created":"2020-06-23T12:00:19Z"},{"day":"19","has_accepted_license":"1","year":"2020","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","scopus_import":"1","volume":11,"date_updated":"2025-04-15T08:09:37Z","ddc":["570"],"date_published":"2020-06-19T00:00:00Z","oa":1,"file_date_updated":"2020-07-14T12:48:08Z","isi":1,"publication":"Nature Communications","status":"public","month":"06","pmid":1,"citation":{"ieee":"M. Lukacisinova, B. Fernando, and M. T. Bollenbach, “Highly parallel lab evolution reveals that epistasis can curb the evolution of antibiotic resistance,” <i>Nature Communications</i>, vol. 11. Springer Nature, 2020.","ama":"Lukacisinova M, Fernando B, Bollenbach MT. Highly parallel lab evolution reveals that epistasis can curb the evolution of antibiotic resistance. <i>Nature Communications</i>. 2020;11. doi:<a href=\"https://doi.org/10.1038/s41467-020-16932-z\">10.1038/s41467-020-16932-z</a>","short":"M. Lukacisinova, B. Fernando, M.T. Bollenbach, Nature Communications 11 (2020).","apa":"Lukacisinova, M., Fernando, B., &#38; Bollenbach, M. T. (2020). Highly parallel lab evolution reveals that epistasis can curb the evolution of antibiotic resistance. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-020-16932-z\">https://doi.org/10.1038/s41467-020-16932-z</a>","ista":"Lukacisinova M, Fernando B, Bollenbach MT. 2020. Highly parallel lab evolution reveals that epistasis can curb the evolution of antibiotic resistance. Nature Communications. 11, 3105.","mla":"Lukacisinova, Marta, et al. “Highly Parallel Lab Evolution Reveals That Epistasis Can Curb the Evolution of Antibiotic Resistance.” <i>Nature Communications</i>, vol. 11, 3105, Springer Nature, 2020, doi:<a href=\"https://doi.org/10.1038/s41467-020-16932-z\">10.1038/s41467-020-16932-z</a>.","chicago":"Lukacisinova, Marta, Booshini Fernando, and Mark Tobias Bollenbach. “Highly Parallel Lab Evolution Reveals That Epistasis Can Curb the Evolution of Antibiotic Resistance.” <i>Nature Communications</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1038/s41467-020-16932-z\">https://doi.org/10.1038/s41467-020-16932-z</a>."},"oa_version":"Published Version","abstract":[{"lang":"eng","text":"Genetic perturbations that affect bacterial resistance to antibiotics have been characterized genome-wide, but how do such perturbations interact with subsequent evolutionary adaptation to the drug? Here, we show that strong epistasis between resistance mutations and systematically identified genes can be exploited to control spontaneous resistance evolution. We evolved hundreds of Escherichia coli K-12 mutant populations in parallel, using a robotic platform that tightly controls population size and selection pressure. We find a global diminishing-returns epistasis pattern: strains that are initially more sensitive generally undergo larger resistance gains. However, some gene deletion strains deviate from this general trend and curtail the evolvability of resistance, including deletions of genes for membrane transport, LPS biosynthesis, and chaperones. Deletions of efflux pump genes force evolution on inferior mutational paths, not explored in the wild type, and some of these essentially block resistance evolution. This effect is due to strong negative epistasis with resistance mutations. The identified genes and cellular functions provide potential targets for development of adjuvants that may block spontaneous resistance evolution when combined with antibiotics."}],"doi":"10.1038/s41467-020-16932-z","publication_status":"published","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"creator":"cziletti","content_type":"application/pdf","file_name":"2020_NatureComm_Lukacisinova.pdf","file_size":1546491,"access_level":"open_access","date_created":"2020-06-30T09:58:50Z","file_id":"8071","date_updated":"2020-07-14T12:48:08Z","checksum":"4f5f49d63add331d5eb8a2bae477b396","relation":"main_file"}],"date_created":"2020-06-29T07:59:35Z","article_processing_charge":"No","title":"Highly parallel lab evolution reveals that epistasis can curb the evolution of antibiotic resistance","article_type":"original","external_id":{"isi":["000545685100002"],"pmid":["32561723"]},"author":[{"last_name":"Lukacisinova","id":"4342E402-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-2519-8004","first_name":"Marta","full_name":"Lukacisinova, Marta"},{"full_name":"Fernando, Booshini","first_name":"Booshini","last_name":"Fernando"},{"first_name":"Mark Tobias","full_name":"Bollenbach, Mark Tobias","last_name":"Bollenbach","orcid":"0000-0003-4398-476X","id":"3E6DB97A-F248-11E8-B48F-1D18A9856A87"}],"quality_controlled":"1","article_number":"3105","publisher":"Springer Nature","publication_identifier":{"eissn":["20411723"]},"project":[{"grant_number":"P27201-B22","_id":"25E9AF9E-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","name":"Revealing the mechanisms underlying drug interactions"},{"grant_number":"RGP0042/2013","_id":"25EB3A80-B435-11E9-9278-68D0E5697425","name":"Revealing the fundamental limits of cell growth"}],"language":[{"iso":"eng"}],"type":"journal_article","_id":"8037","extern":"1","intvolume":"        11"},{"doi":"10.1021/acsami.0c04331","abstract":[{"text":"In the present work, we report a solution-based strategy to produce crystallographically textured SnSe bulk nanomaterials and printed layers with optimized thermoelectric performance in the direction normal to the substrate. Our strategy is based on the formulation of a molecular precursor that can be continuously decomposed to produce a SnSe powder or printed into predefined patterns. The precursor formulation and decomposition conditions are optimized to produce pure phase 2D SnSe nanoplates. The printed layer and the bulk material obtained after hot press displays a clear preferential orientation of the crystallographic domains, resulting in an ultralow thermal conductivity of 0.55 W m–1 K–1 in the direction normal to the substrate. Such textured nanomaterials present highly anisotropic properties with the best thermoelectric performance in plane, i.e., in the directions parallel to the substrate, which coincide with the crystallographic bc plane of SnSe. This is an unfortunate characteristic because thermoelectric devices are designed to create/harvest temperature gradients in the direction normal to the substrate. We further demonstrate that this limitation can be overcome with the introduction of small amounts of tellurium in the precursor. The presence of tellurium allows one to reduce the band gap and increase both the charge carrier concentration and the mobility, especially the cross plane, with a minimal decrease of the Seebeck coefficient. These effects translate into record out of plane ZT values at 800 K.","lang":"eng"}],"publication_status":"published","page":"27104-27111","OA_place":"repository","month":"06","status":"public","OA_type":"green","oa_version":"Submitted Version","citation":{"apa":"Zhang, Y., Liu, Y., Xing, C., Zhang, T., Li, M., Pacios, M., … Cabot, A. (2020). Tin selenide molecular precursor for the solution processing of thermoelectric materials and devices. <i>ACS Applied Materials and Interfaces</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acsami.0c04331\">https://doi.org/10.1021/acsami.0c04331</a>","ista":"Zhang Y, Liu Y, Xing C, Zhang T, Li M, Pacios M, Yu X, Arbiol J, Llorca J, Cadavid D, Ibáñez M, Cabot A. 2020. Tin selenide molecular precursor for the solution processing of thermoelectric materials and devices. ACS Applied Materials and Interfaces. 12(24), 27104–27111.","mla":"Zhang, Yu, et al. “Tin Selenide Molecular Precursor for the Solution Processing of Thermoelectric Materials and Devices.” <i>ACS Applied Materials and Interfaces</i>, vol. 12, no. 24, American Chemical Society, 2020, pp. 27104–11, doi:<a href=\"https://doi.org/10.1021/acsami.0c04331\">10.1021/acsami.0c04331</a>.","chicago":"Zhang, Yu, Yu Liu, Congcong Xing, Ting Zhang, Mengyao Li, Mercè Pacios, Xiaoting Yu, et al. “Tin Selenide Molecular Precursor for the Solution Processing of Thermoelectric Materials and Devices.” <i>ACS Applied Materials and Interfaces</i>. American Chemical Society, 2020. <a href=\"https://doi.org/10.1021/acsami.0c04331\">https://doi.org/10.1021/acsami.0c04331</a>.","ieee":"Y. Zhang <i>et al.</i>, “Tin selenide molecular precursor for the solution processing of thermoelectric materials and devices,” <i>ACS Applied Materials and Interfaces</i>, vol. 12, no. 24. American Chemical Society, pp. 27104–27111, 2020.","ama":"Zhang Y, Liu Y, Xing C, et al. Tin selenide molecular precursor for the solution processing of thermoelectric materials and devices. <i>ACS Applied Materials and Interfaces</i>. 2020;12(24):27104-27111. doi:<a href=\"https://doi.org/10.1021/acsami.0c04331\">10.1021/acsami.0c04331</a>","short":"Y. Zhang, Y. Liu, C. Xing, T. Zhang, M. Li, M. Pacios, X. Yu, J. Arbiol, J. Llorca, D. Cadavid, M. Ibáñez, A. Cabot, ACS Applied Materials and Interfaces 12 (2020) 27104–27111."},"pmid":1,"date_updated":"2025-04-24T11:49:17Z","volume":12,"publication":"ACS Applied Materials and Interfaces","isi":1,"oa":1,"date_published":"2020-06-17T00:00:00Z","year":"2020","day":"17","scopus_import":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","project":[{"name":"ISTplus - Postdoctoral Fellowships","call_identifier":"H2020","_id":"260C2330-B435-11E9-9278-68D0E5697425","grant_number":"754411"}],"publication_identifier":{"eissn":["19448252"]},"ec_funded":1,"intvolume":"        12","_id":"8039","type":"journal_article","language":[{"iso":"eng"}],"quality_controlled":"1","author":[{"last_name":"Zhang","first_name":"Yu","full_name":"Zhang, Yu"},{"full_name":"Liu, Yu","first_name":"Yu","orcid":"0000-0001-7313-6740","id":"2A70014E-F248-11E8-B48F-1D18A9856A87","last_name":"Liu"},{"full_name":"Xing, Congcong","first_name":"Congcong","last_name":"Xing"},{"full_name":"Zhang, Ting","first_name":"Ting","last_name":"Zhang"},{"first_name":"Mengyao","full_name":"Li, Mengyao","last_name":"Li"},{"last_name":"Pacios","full_name":"Pacios, Mercè","first_name":"Mercè"},{"full_name":"Yu, Xiaoting","first_name":"Xiaoting","last_name":"Yu"},{"last_name":"Arbiol","first_name":"Jordi","full_name":"Arbiol, Jordi"},{"last_name":"Llorca","full_name":"Llorca, Jordi","first_name":"Jordi"},{"first_name":"Doris","full_name":"Cadavid, Doris","last_name":"Cadavid"},{"last_name":"Ibáñez","orcid":"0000-0001-5013-2843","id":"43C61214-F248-11E8-B48F-1D18A9856A87","first_name":"Maria","full_name":"Ibáñez, Maria"},{"last_name":"Cabot","first_name":"Andreu","full_name":"Cabot, Andreu"}],"main_file_link":[{"url":"https://ddd.uab.cat/pub/artpub/2020/235998/acsapplmaterinterfaces_a2020v12np27104pp.pdf","open_access":"1"}],"department":[{"_id":"MaIb"}],"publisher":"American Chemical Society","issue":"24","title":"Tin selenide molecular precursor for the solution processing of thermoelectric materials and devices","article_processing_charge":"No","external_id":{"isi":["000542925300032"],"pmid":["32437128"]},"article_type":"original","corr_author":"1","date_created":"2020-06-29T07:59:35Z"}]