[{"file_date_updated":"2024-03-04T10:52:42Z","has_accepted_license":"1","volume":4,"date_published":"2020-12-01T00:00:00Z","article_type":"original","language":[{"iso":"eng"}],"scopus_import":"1","month":"12","license":"https://creativecommons.org/licenses/by/4.0/","doi":"10.1007/s41468-020-00058-8","author":[{"full_name":"Bauer, U.","first_name":"U.","last_name":"Bauer"},{"orcid":"0000-0002-9823-6833","first_name":"Herbert","last_name":"Edelsbrunner","full_name":"Edelsbrunner, Herbert","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87"},{"id":"4483EF78-F248-11E8-B48F-1D18A9856A87","full_name":"Jablonski, Grzegorz","last_name":"Jablonski","orcid":"0000-0002-3536-9866","first_name":"Grzegorz"},{"first_name":"M.","last_name":"Mrozek","full_name":"Mrozek, M."}],"oa_version":"Published Version","citation":{"ista":"Bauer U, Edelsbrunner H, Jablonski G, Mrozek M. 2020. Čech-Delaunay gradient flow and homology inference for self-maps. Journal of Applied and Computational Topology. 4(4), 455–480.","chicago":"Bauer, U., Herbert Edelsbrunner, Grzegorz Jablonski, and M. Mrozek. “Čech-Delaunay Gradient Flow and Homology Inference for Self-Maps.” <i>Journal of Applied and Computational Topology</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1007/s41468-020-00058-8\">https://doi.org/10.1007/s41468-020-00058-8</a>.","ieee":"U. Bauer, H. Edelsbrunner, G. Jablonski, and M. Mrozek, “Čech-Delaunay gradient flow and homology inference for self-maps,” <i>Journal of Applied and Computational Topology</i>, vol. 4, no. 4. Springer Nature, pp. 455–480, 2020.","mla":"Bauer, U., et al. “Čech-Delaunay Gradient Flow and Homology Inference for Self-Maps.” <i>Journal of Applied and Computational Topology</i>, vol. 4, no. 4, Springer Nature, 2020, pp. 455–80, doi:<a href=\"https://doi.org/10.1007/s41468-020-00058-8\">10.1007/s41468-020-00058-8</a>.","short":"U. Bauer, H. Edelsbrunner, G. Jablonski, M. Mrozek, Journal of Applied and Computational Topology 4 (2020) 455–480.","apa":"Bauer, U., Edelsbrunner, H., Jablonski, G., &#38; Mrozek, M. (2020). Čech-Delaunay gradient flow and homology inference for self-maps. <i>Journal of Applied and Computational Topology</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s41468-020-00058-8\">https://doi.org/10.1007/s41468-020-00058-8</a>","ama":"Bauer U, Edelsbrunner H, Jablonski G, Mrozek M. Čech-Delaunay gradient flow and homology inference for self-maps. <i>Journal of Applied and Computational Topology</i>. 2020;4(4):455-480. doi:<a href=\"https://doi.org/10.1007/s41468-020-00058-8\">10.1007/s41468-020-00058-8</a>"},"abstract":[{"text":"We call a continuous self-map that reveals itself through a discrete set of point-value pairs a sampled dynamical system. Capturing the available information with chain maps on Delaunay complexes, we use persistent homology to quantify the evidence of recurrent behavior. We establish a sampling theorem to recover the eigenspaces of the endomorphism on homology induced by the self-map. Using a combinatorial gradient flow arising from the discrete Morse theory for Čech and Delaunay complexes, we construct a chain map to transform the problem from the natural but expensive Čech complexes to the computationally efficient Delaunay triangulations. The fast chain map algorithm has applications beyond dynamical systems.","lang":"eng"}],"type":"journal_article","publication_identifier":{"issn":["2367-1726"],"eissn":["2367-1734"]},"date_updated":"2024-03-04T10:54:04Z","year":"2020","title":"Čech-Delaunay gradient flow and homology inference for self-maps","department":[{"_id":"HeEd"}],"page":"455-480","publisher":"Springer Nature","file":[{"relation":"main_file","file_id":"15065","creator":"dernst","access_level":"open_access","date_updated":"2024-03-04T10:52:42Z","content_type":"application/pdf","file_name":"2020_JourApplCompTopology_Bauer.pdf","checksum":"eed1168b6e66cd55272c19bb7fca8a1c","date_created":"2024-03-04T10:52:42Z","file_size":851190,"success":1}],"oa":1,"status":"public","publication":"Journal of Applied and Computational Topology","quality_controlled":"1","ddc":["500"],"_id":"15064","article_processing_charge":"Yes (via OA deal)","acknowledgement":"This research has been supported by the DFG Collaborative Research Center SFB/TRR 109 “Discretization in Geometry and Dynamics”, by Polish MNiSzW Grant No. 2621/7.PR/12/2013/2, by the Polish National Science Center under Maestro Grant No. 2014/14/A/ST1/00453 and Grant No. DEC-2013/09/N/ST6/02995. Open Access funding provided by Projekt DEAL.","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"issue":"4","day":"01","date_created":"2024-03-04T10:47:49Z","publication_status":"published","intvolume":"         4"},{"author":[{"last_name":"Oshurkova","first_name":"Viktoriia","full_name":"Oshurkova, Viktoriia"},{"first_name":"Olga","last_name":"Troshina","full_name":"Troshina, Olga"},{"full_name":"Trubitsyn, Vladimir","last_name":"Trubitsyn","first_name":"Vladimir"},{"full_name":"Ryzhmanova, Yana","first_name":"Yana","last_name":"Ryzhmanova"},{"full_name":"Bochkareva, Olga","id":"C4558D3C-6102-11E9-A62E-F418E6697425","first_name":"Olga","orcid":"0000-0003-1006-6639","last_name":"Bochkareva"},{"last_name":"Shcherbakova","first_name":"Viktoria","full_name":"Shcherbakova, Viktoria"}],"oa_version":"Published Version","conference":{"end_date":"2020-11-30","start_date":"2020-11-02","location":"Virtual","name":"ECM: Electronic Conference on Microbiology"},"abstract":[{"text":"A mesophilic methanogenic culture, designated JL01, was isolated from Holocene permafrost in the Russian Arctic [1]. After long-term extensive cultivation at 15°C it turned out to be a tied binary culture of archaeal (JL01) and bacterial (Sphaerochaeta associata GLS2) strains.\r\nStrain JL01 was a strict anaerobe and grew on methanol, acetate and methylamines as energy and carbon sources. Cells were irregular coccoid, non-motile, non-spore-forming, and Gram-stainpositive. Optimum conditions for growth were 24-28 oC, pH 6.8–7.3 and 0.075-0.1 M NaCl.\r\nPhylogenetic tree reconstructions based on 16S rRNA and concatenated alignment of broadly\r\nconserved protein-coding genes revealed its close relation to Methanosarcina mazei S-6\r\nT (similarity 99.5%). The comparison of whole genomic sequences (ANI) of the isolate and the type strain of M.mazei was 98.5%, which is higher than the values recommended for new species. Thus strain JL01 (=VKM B-2370=JCM 31898) represents the first M. mazei isolated from permanently subzero Arcticsediments. The long-term co-cultivation of JL01 with S. associata GLS2T showed the methane production without any additional carbon and energy sources. Genome analysis of S. associata GLS2T revealed putative genes involved in methanochondroithin catabolism.","lang":"eng"}],"citation":{"ama":"Oshurkova V, Troshina O, Trubitsyn V, Ryzhmanova Y, Bochkareva O, Shcherbakova V. Characterization of methanosarcina mazei JL01 isolated from holocene arctic permafrost and study of the archaeon cooperation with bacterium Sphaerochaeta associata GLS2T. In: <i>Proceedings of 1st International Electronic Conference on Microbiology</i>. MDPI; 2020. doi:<a href=\"https://doi.org/10.3390/ecm2020-07116\">10.3390/ecm2020-07116</a>","apa":"Oshurkova, V., Troshina, O., Trubitsyn, V., Ryzhmanova, Y., Bochkareva, O., &#38; Shcherbakova, V. (2020). Characterization of methanosarcina mazei JL01 isolated from holocene arctic permafrost and study of the archaeon cooperation with bacterium Sphaerochaeta associata GLS2T. In <i>Proceedings of 1st International Electronic Conference on Microbiology</i>. Virtual: MDPI. <a href=\"https://doi.org/10.3390/ecm2020-07116\">https://doi.org/10.3390/ecm2020-07116</a>","short":"V. Oshurkova, O. Troshina, V. Trubitsyn, Y. Ryzhmanova, O. Bochkareva, V. Shcherbakova, in:, Proceedings of 1st International Electronic Conference on Microbiology, MDPI, 2020.","ista":"Oshurkova V, Troshina O, Trubitsyn V, Ryzhmanova Y, Bochkareva O, Shcherbakova V. 2020. Characterization of methanosarcina mazei JL01 isolated from holocene arctic permafrost and study of the archaeon cooperation with bacterium Sphaerochaeta associata GLS2T. Proceedings of 1st International Electronic Conference on Microbiology. ECM: Electronic Conference on Microbiology.","chicago":"Oshurkova, Viktoriia, Olga Troshina, Vladimir Trubitsyn, Yana Ryzhmanova, Olga Bochkareva, and Viktoria Shcherbakova. “Characterization of Methanosarcina Mazei JL01 Isolated from Holocene Arctic Permafrost and Study of the Archaeon Cooperation with Bacterium Sphaerochaeta Associata GLS2T.” In <i>Proceedings of 1st International Electronic Conference on Microbiology</i>. MDPI, 2020. <a href=\"https://doi.org/10.3390/ecm2020-07116\">https://doi.org/10.3390/ecm2020-07116</a>.","mla":"Oshurkova, Viktoriia, et al. “Characterization of Methanosarcina Mazei JL01 Isolated from Holocene Arctic Permafrost and Study of the Archaeon Cooperation with Bacterium Sphaerochaeta Associata GLS2T.” <i>Proceedings of 1st International Electronic Conference on Microbiology</i>, MDPI, 2020, doi:<a href=\"https://doi.org/10.3390/ecm2020-07116\">10.3390/ecm2020-07116</a>.","ieee":"V. Oshurkova, O. Troshina, V. Trubitsyn, Y. Ryzhmanova, O. Bochkareva, and V. Shcherbakova, “Characterization of methanosarcina mazei JL01 isolated from holocene arctic permafrost and study of the archaeon cooperation with bacterium Sphaerochaeta associata GLS2T,” in <i>Proceedings of 1st International Electronic Conference on Microbiology</i>, Virtual, 2020."},"type":"conference","date_updated":"2024-03-20T08:06:22Z","year":"2020","title":"Characterization of methanosarcina mazei JL01 isolated from holocene arctic permafrost and study of the archaeon cooperation with bacterium Sphaerochaeta associata GLS2T","file_date_updated":"2024-03-20T08:05:46Z","has_accepted_license":"1","date_published":"2020-11-02T00:00:00Z","language":[{"iso":"eng"}],"month":"11","doi":"10.3390/ecm2020-07116","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"date_created":"2024-03-04T11:41:31Z","day":"02","publication_status":"published","publisher":"MDPI","department":[{"_id":"FyKo"}],"file":[{"success":1,"file_size":595543,"date_created":"2024-03-20T08:05:46Z","checksum":"d1914af7811a21a4b2744eb51b5834e3","file_name":"2020_ECM_Oshurkova.pdf","date_updated":"2024-03-20T08:05:46Z","content_type":"application/pdf","access_level":"open_access","creator":"dernst","relation":"main_file","file_id":"15127"}],"oa":1,"publication":"Proceedings of 1st International Electronic Conference on Microbiology","status":"public","ddc":["570"],"quality_controlled":"1","_id":"15071","article_processing_charge":"Yes","acknowledgement":"The work was supported by of Russian Foundation of Basic Research: grant № 19-04-00831 for Viktoria Shcherbakova and Olga Troshina, grant № 18-34-00334 for Viktoriia Oshurkova and Vladimir Trubitsyn. \r\nWe thank Dr Natalia Suzina (IBPM RAS, Federal Research Center Pushchino Center for\r\nBiological Research RAS) for the help with the microscopic studies, respectively; Dr. Margarita Meyer (Division of Genetics, Department of Medicine, BWH and HMS, USA) and Dr Fedor Kondrashov (IST, Austria) for their help in obtaining the genomic sequence of strain JL01. "},{"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/3.0/legalcode","short":"CC BY (3.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 3.0 Unported (CC BY 3.0)"},"date_created":"2024-03-05T07:25:37Z","day":"29","publication_status":"published","intvolume":"       168","department":[{"_id":"DaAl"}],"publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","oa":1,"file":[{"creator":"dernst","file_id":"15078","relation":"main_file","content_type":"application/pdf","date_updated":"2024-03-05T07:25:15Z","access_level":"open_access","file_size":782987,"date_created":"2024-03-05T07:25:15Z","checksum":"e5eb16199f4ccfd77a321977eb3f026f","file_name":"2020_LIPIcs_Alistarh.pdf","success":1}],"status":"public","alternative_title":["LIPIcs"],"publication":"47th International Colloquium on Automata, Languages, and Programming","external_id":{"arxiv":["2003.09297"]},"quality_controlled":"1","ddc":["000"],"_id":"15077","article_processing_charge":"No","acknowledgement":"The authors sincerely thank Thomas Sauerwald and George Giakkoupis for insightful discussions, and Mohsen Ghaffari, Yuval Peres, and Udi Wieder for feedback on earlier\r\nversions of this draft. We also thank the ICALP anonymous reviewers for their very useful comments.\r\nFunding: European Research Council funding award PR1042ERC01","author":[{"first_name":"Dan-Adrian","orcid":"0000-0003-3650-940X","last_name":"Alistarh","full_name":"Alistarh, Dan-Adrian","id":"4A899BFC-F248-11E8-B48F-1D18A9856A87"},{"id":"3279A00C-F248-11E8-B48F-1D18A9856A87","full_name":"Nadiradze, Giorgi","last_name":"Nadiradze","orcid":"0000-0001-5634-0731","first_name":"Giorgi"},{"full_name":"Sabour, Amirmojtaba","id":"bcc145fd-e77f-11ea-ae8b-80d661dbff67","first_name":"Amirmojtaba","last_name":"Sabour"}],"conference":{"name":"ICALP: Automata, Languages and Programming","start_date":"2020-07-08","location":"Saarbrücken, Germany, Virtual","end_date":"2020-07-11"},"oa_version":"Published Version","article_number":"7","citation":{"apa":"Alistarh, D.-A., Nadiradze, G., &#38; Sabour, A. (2020). Dynamic averaging load balancing on cycles. In <i>47th International Colloquium on Automata, Languages, and Programming</i> (Vol. 168). Saarbrücken, Germany, Virtual: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.ICALP.2020.7\">https://doi.org/10.4230/LIPIcs.ICALP.2020.7</a>","ama":"Alistarh D-A, Nadiradze G, Sabour A. Dynamic averaging load balancing on cycles. In: <i>47th International Colloquium on Automata, Languages, and Programming</i>. Vol 168. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2020. doi:<a href=\"https://doi.org/10.4230/LIPIcs.ICALP.2020.7\">10.4230/LIPIcs.ICALP.2020.7</a>","ieee":"D.-A. Alistarh, G. Nadiradze, and A. Sabour, “Dynamic averaging load balancing on cycles,” in <i>47th International Colloquium on Automata, Languages, and Programming</i>, Saarbrücken, Germany, Virtual, 2020, vol. 168.","mla":"Alistarh, Dan-Adrian, et al. “Dynamic Averaging Load Balancing on Cycles.” <i>47th International Colloquium on Automata, Languages, and Programming</i>, vol. 168, 7, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020, doi:<a href=\"https://doi.org/10.4230/LIPIcs.ICALP.2020.7\">10.4230/LIPIcs.ICALP.2020.7</a>.","ista":"Alistarh D-A, Nadiradze G, Sabour A. 2020. Dynamic averaging load balancing on cycles. 47th International Colloquium on Automata, Languages, and Programming. ICALP: Automata, Languages and Programming, LIPIcs, vol. 168, 7.","chicago":"Alistarh, Dan-Adrian, Giorgi Nadiradze, and Amirmojtaba Sabour. “Dynamic Averaging Load Balancing on Cycles.” In <i>47th International Colloquium on Automata, Languages, and Programming</i>, Vol. 168. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020. <a href=\"https://doi.org/10.4230/LIPIcs.ICALP.2020.7\">https://doi.org/10.4230/LIPIcs.ICALP.2020.7</a>.","short":"D.-A. Alistarh, G. Nadiradze, A. Sabour, in:, 47th International Colloquium on Automata, Languages, and Programming, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020."},"abstract":[{"text":"We consider the following dynamic load-balancing process: given an underlying graph G with n nodes, in each step t≥ 0, one unit of load is created, and placed at a randomly chosen graph node. In the same step, the chosen node picks a random neighbor, and the two nodes balance their loads by averaging them. We are interested in the expected gap between the minimum and maximum loads at nodes as the process progresses, and its dependence on n and on the graph structure. Variants of the above graphical balanced allocation process have been studied previously by Peres, Talwar, and Wieder [Peres et al., 2015], and by Sauerwald and Sun [Sauerwald and Sun, 2015]. These authors left as open the question of characterizing the gap in the case of cycle graphs in the dynamic case, where weights are created during the algorithm’s execution. For this case, the only known upper bound is of 𝒪(n log n), following from a majorization argument due to [Peres et al., 2015], which analyzes a related graphical allocation process. In this paper, we provide an upper bound of 𝒪 (√n log n) on the expected gap of the above process for cycles of length n. We introduce a new potential analysis technique, which enables us to bound the difference in load between k-hop neighbors on the cycle, for any k ≤ n/2. We complement this with a \"gap covering\" argument, which bounds the maximum value of the gap by bounding its value across all possible subsets of a certain structure, and recursively bounding the gaps within each subset. We provide analytical and experimental evidence that our upper bound on the gap is tight up to a logarithmic factor.","lang":"eng"}],"type":"conference","arxiv":1,"date_updated":"2025-07-10T11:55:11Z","year":"2020","title":"Dynamic averaging load balancing on cycles","related_material":{"record":[{"id":"8286","status":"public","relation":"later_version"}]},"corr_author":"1","has_accepted_license":"1","file_date_updated":"2024-03-05T07:25:15Z","project":[{"_id":"268A44D6-B435-11E9-9278-68D0E5697425","grant_number":"805223","name":"Elastic Coordination for Scalable Machine Learning","call_identifier":"H2020"}],"ec_funded":1,"volume":168,"date_published":"2020-06-29T00:00:00Z","language":[{"iso":"eng"}],"scopus_import":"1","license":"https://creativecommons.org/licenses/by/3.0/","doi":"10.4230/LIPIcs.ICALP.2020.7","month":"06"},{"publication_status":"published","year":"2020","title":"Disjoint tree-compatible plane perfect matchings","type":"conference","date_updated":"2026-06-18T17:45:52Z","abstract":[{"text":"Two plane drawings of geometric graphs on the same set of points are called disjoint compatible if their union is plane and they do not have an edge in common. For a given set S of 2n points two plane drawings of perfect matchings M1 and M2 (which do not need to be disjoint nor compatible) are disjoint tree-compatible if there exists a plane drawing of a spanning tree T on S which is disjoint compatible to both M1 and M2.\r\nWe show that the graph of all disjoint tree-compatible perfect geometric matchings on 2n points in convex position is connected if and only if 2n ≥ 10. Moreover, in that case the diameter\r\nof this graph is either 4 or 5, independent of n.","lang":"eng"}],"citation":{"ista":"Aichholzer O, Obmann J, Patak P, Perz D, Tkadlec J. 2020. Disjoint tree-compatible plane perfect matchings. 36th European Workshop on Computational Geometry. EuroCG: European Workshop on Computational Geometry, 56.","chicago":"Aichholzer, Oswin, Julia Obmann, Pavel Patak, Daniel Perz, and Josef Tkadlec. “Disjoint Tree-Compatible Plane Perfect Matchings.” In <i>36th European Workshop on Computational Geometry</i>, 2020.","ieee":"O. Aichholzer, J. Obmann, P. Patak, D. Perz, and J. Tkadlec, “Disjoint tree-compatible plane perfect matchings,” in <i>36th European Workshop on Computational Geometry</i>, Würzburg, Germany, Virtual, 2020.","mla":"Aichholzer, Oswin, et al. “Disjoint Tree-Compatible Plane Perfect Matchings.” <i>36th European Workshop on Computational Geometry</i>, 56, 2020.","short":"O. Aichholzer, J. Obmann, P. Patak, D. Perz, J. Tkadlec, in:, 36th European Workshop on Computational Geometry, 2020.","apa":"Aichholzer, O., Obmann, J., Patak, P., Perz, D., &#38; Tkadlec, J. (2020). Disjoint tree-compatible plane perfect matchings. In <i>36th European Workshop on Computational Geometry</i>. Würzburg, Germany, Virtual.","ama":"Aichholzer O, Obmann J, Patak P, Perz D, Tkadlec J. Disjoint tree-compatible plane perfect matchings. In: <i>36th European Workshop on Computational Geometry</i>. ; 2020."},"article_number":"56","day":"01","date_created":"2024-03-05T08:57:17Z","author":[{"first_name":"Oswin","last_name":"Aichholzer","full_name":"Aichholzer, Oswin"},{"first_name":"Julia","last_name":"Obmann","full_name":"Obmann, Julia"},{"last_name":"Patak","first_name":"Pavel","id":"B593B804-1035-11EA-B4F1-947645A5BB83","full_name":"Patak, Pavel"},{"full_name":"Perz, Daniel","first_name":"Daniel","last_name":"Perz"},{"last_name":"Tkadlec","orcid":"0000-0002-1097-9684","first_name":"Josef","id":"3F24CCC8-F248-11E8-B48F-1D18A9856A87","full_name":"Tkadlec, Josef"}],"main_file_link":[{"url":"https://www1.pub.informatik.uni-wuerzburg.de/eurocg2020/data/uploads/papers/eurocg20_paper_56.pdf","open_access":"1"}],"conference":{"start_date":"2020-03-16","location":"Würzburg, Germany, Virtual","end_date":"2020-03-18","name":"EuroCG: European Workshop on Computational Geometry"},"oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"15082","article_processing_charge":"No","month":"04","acknowledgement":"Research on this work was initiated at the 6th Austrian-Japanese-Mexican-Spanish Workshop on Discrete Geometry and continued during the 16th European Geometric Graph-Week, both held near Strobl, Austria. We are grateful to the participants for the inspiring atmosphere. We especially thank Alexander Pilz for bringing this class of problems to our attention and Birgit Vogtenhuber for inspiring discussions. D.P. is partially supported by the FWF grant I 3340-N35 (Collaborative DACH project Arrangements and Drawings). The research stay of P.P. at IST Austria is funded by the project CZ.02.2.69/0.0/0.0/17_050/0008466 Improvement of internationalization in the field of research and development at Charles University, through the support of quality projects MSCA-IF. This project has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 734922.","ddc":["000"],"quality_controlled":"1","publication":"36th European Workshop on Computational Geometry","language":[{"iso":"eng"}],"status":"public","department":[{"_id":"KrCh"},{"_id":"UlWa"}],"corr_author":"1","date_published":"2020-04-01T00:00:00Z","oa":1},{"conference":{"name":"NeurIPS: Neural Information Processing Systems","start_date":"2020-12-06","location":"Vancouver, Canada","end_date":"2020-12-12"},"oa_version":"Preprint","author":[{"full_name":"Faghri, Fartash ","first_name":"Fartash ","last_name":"Faghri"},{"full_name":"Tabrizian, Iman ","last_name":"Tabrizian","first_name":"Iman "},{"first_name":"Ilia","last_name":"Markov","full_name":"Markov, Ilia","id":"D0CF4148-C985-11E9-8066-0BDEE5697425"},{"first_name":"Dan-Adrian","orcid":"0000-0003-3650-940X","last_name":"Alistarh","full_name":"Alistarh, Dan-Adrian","id":"4A899BFC-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Roy, Daniel ","first_name":"Daniel ","last_name":"Roy"},{"full_name":"Ramezani-Kebrya, Ali ","last_name":"Ramezani-Kebrya","first_name":"Ali "}],"citation":{"apa":"Faghri, F., Tabrizian, I., Markov, I., Alistarh, D.-A., Roy, D., &#38; Ramezani-Kebrya, A. (2020). Adaptive gradient quantization for data-parallel SGD. In <i>Advances in Neural Information Processing Systems</i> (Vol. 33). Vancouver, Canada: Neural Information Processing Systems Foundation.","ama":"Faghri F, Tabrizian I, Markov I, Alistarh D-A, Roy D, Ramezani-Kebrya A. Adaptive gradient quantization for data-parallel SGD. In: <i>Advances in Neural Information Processing Systems</i>. Vol 33. Neural Information Processing Systems Foundation; 2020.","chicago":"Faghri, Fartash , Iman  Tabrizian, Ilia Markov, Dan-Adrian Alistarh, Daniel  Roy, and Ali  Ramezani-Kebrya. “Adaptive Gradient Quantization for Data-Parallel SGD.” In <i>Advances in Neural Information Processing Systems</i>, Vol. 33. Neural Information Processing Systems Foundation, 2020.","ista":"Faghri F, Tabrizian I, Markov I, Alistarh D-A, Roy D, Ramezani-Kebrya A. 2020. Adaptive gradient quantization for data-parallel SGD. Advances in Neural Information Processing Systems. NeurIPS: Neural Information Processing Systems, NeurIPS, vol. 33.","mla":"Faghri, Fartash, et al. “Adaptive Gradient Quantization for Data-Parallel SGD.” <i>Advances in Neural Information Processing Systems</i>, vol. 33, Neural Information Processing Systems Foundation, 2020.","ieee":"F. Faghri, I. Tabrizian, I. Markov, D.-A. Alistarh, D. Roy, and A. Ramezani-Kebrya, “Adaptive gradient quantization for data-parallel SGD,” in <i>Advances in Neural Information Processing Systems</i>, Vancouver, Canada, 2020, vol. 33.","short":"F. Faghri, I. Tabrizian, I. Markov, D.-A. Alistarh, D. Roy, A. Ramezani-Kebrya, in:, Advances in Neural Information Processing Systems, Neural Information Processing Systems Foundation, 2020."},"abstract":[{"lang":"eng","text":"Many communication-efficient variants of SGD use gradient quantization schemes. These schemes are often heuristic and fixed over the course of training. We empirically observe that the statistics of gradients of deep models change during the training. Motivated by this observation, we introduce two adaptive quantization schemes, ALQ and AMQ. In both schemes, processors update their compression schemes in parallel by efficiently computing sufficient statistics of a parametric distribution. We improve the validation accuracy by almost 2% on CIFAR-10 and 1% on ImageNet in challenging low-cost communication setups. Our adaptive methods are also significantly more robust to the choice of hyperparameters.\r\n\r\n"}],"date_updated":"2025-04-14T07:49:16Z","arxiv":1,"type":"conference","publication_identifier":{"isbn":["9781713829546"]},"title":"Adaptive gradient quantization for data-parallel SGD","year":"2020","ec_funded":1,"date_published":"2020-12-10T00:00:00Z","volume":33,"project":[{"_id":"268A44D6-B435-11E9-9278-68D0E5697425","grant_number":"805223","name":"Elastic Coordination for Scalable Machine Learning","call_identifier":"H2020"}],"language":[{"iso":"eng"}],"month":"12","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2010.12460"}],"date_created":"2024-03-06T08:35:58Z","day":"10","intvolume":"        33","publication_status":"published","oa":1,"department":[{"_id":"DaAl"}],"publisher":"Neural Information Processing Systems Foundation","status":"public","alternative_title":["NeurIPS"],"publication":"Advances in Neural Information Processing Systems","quality_controlled":"1","external_id":{"arxiv":["2010.12460"]},"acknowledgement":"The authors would like to thank Blair Bilodeau, David Fleet, Mufan Li, and Jeffrey Negrea for\r\nhelpful discussions. FF was supported by OGS Scholarship. DA and IM were supported the\r\nEuropean Research Council (ERC) under the European Union’s Horizon 2020 research and innovation\r\nprogramme (grant agreement No 805223 ScaleML). DMR was supported by an NSERC Discovery\r\nGrant. ARK was supported by NSERC Postdoctoral Fellowship. Resources used in preparing this research were provided, in part, by the Province of Ontario, the Government of Canada through CIFAR, and companies sponsoring the Vector Institute.","_id":"15086","article_processing_charge":"No"},{"oa_version":"Published Version","author":[{"full_name":"O’Brien, Roisin E.","last_name":"O’Brien","first_name":"Roisin E."},{"first_name":"Inês C.","last_name":"Santos","full_name":"Santos, Inês C."},{"last_name":"Wrapp","first_name":"Daniel","full_name":"Wrapp, Daniel"},{"last_name":"Bravo","orcid":"0000-0003-0456-0753","first_name":"Jack Peter Kelly","id":"96aecfa5-8931-11ee-af30-aa6a5d6eee0e","full_name":"Bravo, Jack Peter Kelly"},{"full_name":"Schwartz, Evan A.","first_name":"Evan A.","last_name":"Schwartz"},{"last_name":"Brodbelt","first_name":"Jennifer S.","full_name":"Brodbelt, Jennifer S."},{"last_name":"Taylor","first_name":"David W.","full_name":"Taylor, David W."}],"article_number":"5931","citation":{"ama":"O’Brien RE, Santos IC, Wrapp D, et al. Structural basis for assembly of non-canonical small subunits into type I-C Cascade. <i>Nature Communications</i>. 2020;11. doi:<a href=\"https://doi.org/10.1038/s41467-020-19785-8\">10.1038/s41467-020-19785-8</a>","apa":"O’Brien, R. E., Santos, I. C., Wrapp, D., Bravo, J. P. K., Schwartz, E. A., Brodbelt, J. S., &#38; Taylor, D. W. (2020). Structural basis for assembly of non-canonical small subunits into type I-C Cascade. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-020-19785-8\">https://doi.org/10.1038/s41467-020-19785-8</a>","short":"R.E. O’Brien, I.C. Santos, D. Wrapp, J.P.K. Bravo, E.A. Schwartz, J.S. Brodbelt, D.W. Taylor, Nature Communications 11 (2020).","ieee":"R. E. O’Brien <i>et al.</i>, “Structural basis for assembly of non-canonical small subunits into type I-C Cascade,” <i>Nature Communications</i>, vol. 11. Springer Nature, 2020.","mla":"O’Brien, Roisin E., et al. “Structural Basis for Assembly of Non-Canonical Small Subunits into Type I-C Cascade.” <i>Nature Communications</i>, vol. 11, 5931, Springer Nature, 2020, doi:<a href=\"https://doi.org/10.1038/s41467-020-19785-8\">10.1038/s41467-020-19785-8</a>.","ista":"O’Brien RE, Santos IC, Wrapp D, Bravo JPK, Schwartz EA, Brodbelt JS, Taylor DW. 2020. Structural basis for assembly of non-canonical small subunits into type I-C Cascade. Nature Communications. 11, 5931.","chicago":"O’Brien, Roisin E., Inês C. Santos, Daniel Wrapp, Jack Peter Kelly Bravo, Evan A. Schwartz, Jennifer S. Brodbelt, and David W. Taylor. “Structural Basis for Assembly of Non-Canonical Small Subunits into Type I-C Cascade.” <i>Nature Communications</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1038/s41467-020-19785-8\">https://doi.org/10.1038/s41467-020-19785-8</a>."},"abstract":[{"text":"Bacteria and archaea employ CRISPR (clustered, regularly, interspaced, short palindromic repeats)-Cas (CRISPR-associated) systems as a type of adaptive immunity to target and degrade foreign nucleic acids. While a myriad of CRISPR-Cas systems have been identified to date, type I-C is one of the most commonly found subtypes in nature. Interestingly, the type I-C system employs a minimal Cascade effector complex, which encodes only three unique subunits in its operon. Here, we present a 3.1 Å resolution cryo-EM structure of the <jats:italic>Desulfovibrio vulgaris</jats:italic> type I-C Cascade, revealing the molecular mechanisms that underlie RNA-directed complex assembly. We demonstrate how this minimal Cascade utilizes previously overlooked, non-canonical small subunits to stabilize R-loop formation. Furthermore, we describe putative PAM and Cas3 binding sites. These findings provide the structural basis for harnessing the type I-C Cascade as a genome-engineering tool.","lang":"eng"}],"date_updated":"2024-06-04T05:52:51Z","type":"journal_article","publication_identifier":{"issn":["2041-1723"]},"title":"Structural basis for assembly of non-canonical small subunits into type I-C Cascade","year":"2020","volume":11,"date_published":"2020-11-23T00:00:00Z","language":[{"iso":"eng"}],"extern":"1","article_type":"original","scopus_import":"1","month":"11","doi":"10.1038/s41467-020-19785-8","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","main_file_link":[{"url":"https://doi.org/10.1038/s41467-020-19785-8","open_access":"1"}],"day":"23","date_created":"2024-03-20T10:43:07Z","pmid":1,"intvolume":"        11","publication_status":"published","keyword":["General Physics and Astronomy","General Biochemistry","Genetics and Molecular Biology","General Chemistry","Multidisciplinary"],"oa":1,"publisher":"Springer Nature","status":"public","publication":"Nature Communications","quality_controlled":"1","external_id":{"pmid":["33230133"]},"_id":"15142","article_processing_charge":"Yes"},{"quality_controlled":"1","scopus_import":"1","_id":"15152","month":"04","doi":"10.1126/science.abb0074","article_processing_charge":"No","date_published":"2020-04-23T00:00:00Z","volume":368,"page":"1460-1465","publisher":"American Association for the Advancement of Science ","status":"public","language":[{"iso":"eng"}],"publication":"Science","extern":"1","article_type":"original","date_updated":"2024-03-25T12:29:34Z","type":"journal_article","publication_identifier":{"eissn":["1095-9203"],"issn":["0036-8075"]},"title":"Mechanisms of OCT4-SOX2 motif readout on nucleosomes","intvolume":"       368","year":"2020","publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"None","author":[{"id":"6437c950-2a03-11ee-914d-d6476dd7b75c","full_name":"Michael, Alicia Kathleen","last_name":"Michael","first_name":"Alicia Kathleen","orcid":"0000-0002-6080-839X"},{"first_name":"Ralph S.","last_name":"Grand","full_name":"Grand, Ralph S."},{"full_name":"Isbel, Luke","first_name":"Luke","last_name":"Isbel"},{"first_name":"Simone","last_name":"Cavadini","full_name":"Cavadini, Simone"},{"full_name":"Kozicka, Zuzanna","first_name":"Zuzanna","last_name":"Kozicka"},{"full_name":"Kempf, Georg","first_name":"Georg","last_name":"Kempf"},{"first_name":"Richard D.","last_name":"Bunker","full_name":"Bunker, Richard D."},{"last_name":"Schenk","first_name":"Andreas D.","full_name":"Schenk, Andreas D."},{"first_name":"Alexandra","last_name":"Graff-Meyer","full_name":"Graff-Meyer, Alexandra"},{"full_name":"Pathare, Ganesh R.","last_name":"Pathare","first_name":"Ganesh R."},{"full_name":"Weiss, Joscha","last_name":"Weiss","first_name":"Joscha"},{"first_name":"Syota","last_name":"Matsumoto","full_name":"Matsumoto, Syota"},{"full_name":"Burger, Lukas","last_name":"Burger","first_name":"Lukas"},{"last_name":"Schübeler","first_name":"Dirk","full_name":"Schübeler, Dirk"},{"full_name":"Thomä, Nicolas H.","last_name":"Thomä","first_name":"Nicolas H."}],"day":"23","date_created":"2024-03-21T07:54:44Z","citation":{"short":"A.K. Michael, R.S. Grand, L. Isbel, S. Cavadini, Z. Kozicka, G. Kempf, R.D. Bunker, A.D. Schenk, A. Graff-Meyer, G.R. Pathare, J. Weiss, S. Matsumoto, L. Burger, D. Schübeler, N.H. Thomä, Science 368 (2020) 1460–1465.","mla":"Michael, Alicia K., et al. “Mechanisms of OCT4-SOX2 Motif Readout on Nucleosomes.” <i>Science</i>, vol. 368, no. 6498, American Association for the Advancement of Science , 2020, pp. 1460–65, doi:<a href=\"https://doi.org/10.1126/science.abb0074\">10.1126/science.abb0074</a>.","ieee":"A. K. Michael <i>et al.</i>, “Mechanisms of OCT4-SOX2 motif readout on nucleosomes,” <i>Science</i>, vol. 368, no. 6498. American Association for the Advancement of Science , pp. 1460–1465, 2020.","chicago":"Michael, Alicia K., Ralph S. Grand, Luke Isbel, Simone Cavadini, Zuzanna Kozicka, Georg Kempf, Richard D. Bunker, et al. “Mechanisms of OCT4-SOX2 Motif Readout on Nucleosomes.” <i>Science</i>. American Association for the Advancement of Science , 2020. <a href=\"https://doi.org/10.1126/science.abb0074\">https://doi.org/10.1126/science.abb0074</a>.","ista":"Michael AK, Grand RS, Isbel L, Cavadini S, Kozicka Z, Kempf G, Bunker RD, Schenk AD, Graff-Meyer A, Pathare GR, Weiss J, Matsumoto S, Burger L, Schübeler D, Thomä NH. 2020. Mechanisms of OCT4-SOX2 motif readout on nucleosomes. Science. 368(6498), 1460–1465.","ama":"Michael AK, Grand RS, Isbel L, et al. Mechanisms of OCT4-SOX2 motif readout on nucleosomes. <i>Science</i>. 2020;368(6498):1460-1465. doi:<a href=\"https://doi.org/10.1126/science.abb0074\">10.1126/science.abb0074</a>","apa":"Michael, A. K., Grand, R. S., Isbel, L., Cavadini, S., Kozicka, Z., Kempf, G., … Thomä, N. H. (2020). Mechanisms of OCT4-SOX2 motif readout on nucleosomes. <i>Science</i>. American Association for the Advancement of Science . <a href=\"https://doi.org/10.1126/science.abb0074\">https://doi.org/10.1126/science.abb0074</a>"},"issue":"6498","abstract":[{"text":"Transcription factors (TFs) regulate gene expression through chromatin where nucleosomes restrict DNA access. To study how TFs bind nucleosome-occupied motifs, we focused on the reprogramming factors OCT4 and SOX2 in mouse embryonic stem cells. We determined TF engagement throughout a nucleosome at base-pair resolution in vitro, enabling structure determination by cryo–electron microscopy at two preferred positions. Depending on motif location, OCT4 and SOX2 differentially distort nucleosomal DNA. At one position, OCT4-SOX2 removes DNA from histone H2A and histone H3; however, at an inverted motif, the TFs only induce local DNA distortions. OCT4 uses one of its two DNA-binding domains to engage DNA in both structures, reading out a partial motif. These findings explain site-specific nucleosome engagement by the pluripotency factors OCT4 and SOX2, and they reveal how TFs distort nucleosomes to access chromatinized motifs.","lang":"eng"}]},{"date_published":"2020-02-26T00:00:00Z","volume":9,"extern":"1","language":[{"iso":"eng"}],"article_type":"original","scopus_import":"1","month":"02","doi":"10.7554/elife.55275","oa_version":"Published Version","author":[{"full_name":"Fribourgh, Jennifer L","last_name":"Fribourgh","first_name":"Jennifer L"},{"first_name":"Ashutosh","last_name":"Srivastava","full_name":"Srivastava, Ashutosh"},{"full_name":"Sandate, Colby R","last_name":"Sandate","first_name":"Colby R"},{"id":"6437c950-2a03-11ee-914d-d6476dd7b75c","full_name":"Michael, Alicia Kathleen","last_name":"Michael","first_name":"Alicia Kathleen"},{"full_name":"Hsu, Peter L","first_name":"Peter L","last_name":"Hsu"},{"first_name":"Christin","last_name":"Rakers","full_name":"Rakers, Christin"},{"last_name":"Nguyen","first_name":"Leslee T","full_name":"Nguyen, Leslee T"},{"full_name":"Torgrimson, Megan R","last_name":"Torgrimson","first_name":"Megan R"},{"full_name":"Parico, Gian Carlo G","last_name":"Parico","first_name":"Gian Carlo G"},{"first_name":"Sarvind","last_name":"Tripathi","full_name":"Tripathi, Sarvind"},{"full_name":"Zheng, Ning","first_name":"Ning","last_name":"Zheng"},{"last_name":"Lander","first_name":"Gabriel C","full_name":"Lander, Gabriel C"},{"first_name":"Tsuyoshi","last_name":"Hirota","full_name":"Hirota, Tsuyoshi"},{"last_name":"Tama","first_name":"Florence","full_name":"Tama, Florence"},{"full_name":"Partch, Carrie L","last_name":"Partch","first_name":"Carrie L"}],"abstract":[{"lang":"eng","text":"Mammalian circadian rhythms are generated by a transcription-based feedback loop in which CLOCK:BMAL1 drives transcription of its repressors (PER1/2, CRY1/2), which ultimately interact with CLOCK:BMAL1 to close the feedback loop with ~24 hr periodicity. Here we pinpoint a key difference between CRY1 and CRY2 that underlies their differential strengths as transcriptional repressors. Both cryptochromes bind the BMAL1 transactivation domain similarly to sequester it from coactivators and repress CLOCK:BMAL1 activity. However, we find that CRY1 is recruited with much higher affinity to the PAS domain core of CLOCK:BMAL1, allowing it to serve as a stronger repressor that lengthens circadian period. We discovered a dynamic serine-rich loop adjacent to the secondary pocket in the photolyase homology region (PHR) domain that regulates differential binding of cryptochromes to the PAS domain core of CLOCK:BMAL1. Notably, binding of the co-repressor PER2 remodels the serine loop of CRY2, making it more CRY1-like and enhancing its affinity for CLOCK:BMAL1."}],"citation":{"chicago":"Fribourgh, Jennifer L, Ashutosh Srivastava, Colby R Sandate, Alicia K. Michael, Peter L Hsu, Christin Rakers, Leslee T Nguyen, et al. “Dynamics at the Serine Loop Underlie Differential Affinity of Cryptochromes for CLOCK:BMAL1 to Control Circadian Timing.” <i>ELife</i>. eLife Sciences Publications, 2020. <a href=\"https://doi.org/10.7554/elife.55275\">https://doi.org/10.7554/elife.55275</a>.","ista":"Fribourgh JL, Srivastava A, Sandate CR, Michael AK, Hsu PL, Rakers C, Nguyen LT, Torgrimson MR, Parico GCG, Tripathi S, Zheng N, Lander GC, Hirota T, Tama F, Partch CL. 2020. Dynamics at the serine loop underlie differential affinity of cryptochromes for CLOCK:BMAL1 to control circadian timing. eLife. 9, 55275.","ieee":"J. L. Fribourgh <i>et al.</i>, “Dynamics at the serine loop underlie differential affinity of cryptochromes for CLOCK:BMAL1 to control circadian timing,” <i>eLife</i>, vol. 9. eLife Sciences Publications, 2020.","mla":"Fribourgh, Jennifer L., et al. “Dynamics at the Serine Loop Underlie Differential Affinity of Cryptochromes for CLOCK:BMAL1 to Control Circadian Timing.” <i>ELife</i>, vol. 9, 55275, eLife Sciences Publications, 2020, doi:<a href=\"https://doi.org/10.7554/elife.55275\">10.7554/elife.55275</a>.","short":"J.L. Fribourgh, A. Srivastava, C.R. Sandate, A.K. Michael, P.L. Hsu, C. Rakers, L.T. Nguyen, M.R. Torgrimson, G.C.G. Parico, S. Tripathi, N. Zheng, G.C. Lander, T. Hirota, F. Tama, C.L. Partch, ELife 9 (2020).","apa":"Fribourgh, J. L., Srivastava, A., Sandate, C. R., Michael, A. K., Hsu, P. L., Rakers, C., … Partch, C. L. (2020). Dynamics at the serine loop underlie differential affinity of cryptochromes for CLOCK:BMAL1 to control circadian timing. <i>ELife</i>. eLife Sciences Publications. <a href=\"https://doi.org/10.7554/elife.55275\">https://doi.org/10.7554/elife.55275</a>","ama":"Fribourgh JL, Srivastava A, Sandate CR, et al. Dynamics at the serine loop underlie differential affinity of cryptochromes for CLOCK:BMAL1 to control circadian timing. <i>eLife</i>. 2020;9. doi:<a href=\"https://doi.org/10.7554/elife.55275\">10.7554/elife.55275</a>"},"article_number":"55275","date_updated":"2024-03-25T12:25:02Z","publication_identifier":{"issn":["2050-084X"]},"type":"journal_article","title":"Dynamics at the serine loop underlie differential affinity of cryptochromes for CLOCK:BMAL1 to control circadian timing","year":"2020","oa":1,"publisher":"eLife Sciences Publications","publication":"eLife","status":"public","quality_controlled":"1","article_processing_charge":"No","_id":"15153","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","main_file_link":[{"open_access":"1","url":"https://doi.org/10.7554/eLife.55275"}],"date_created":"2024-03-21T07:55:12Z","day":"26","intvolume":"         9","publication_status":"published","keyword":["General Immunology and Microbiology","General Biochemistry","Genetics and Molecular Biology","General Medicine","General Neuroscience"]},{"date_published":"2020-11-05T00:00:00Z","volume":501,"article_type":"original","extern":"1","language":[{"iso":"eng"}],"scopus_import":"1","month":"11","doi":"10.1093/mnras/staa3428","author":[{"orcid":"0000-0002-4770-5388","first_name":"Ilaria","last_name":"Caiazzo","full_name":"Caiazzo, Ilaria","id":"8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d"},{"full_name":"Heyl, Jeremy","last_name":"Heyl","first_name":"Jeremy"}],"oa_version":"Preprint","abstract":[{"text":"A new window is opening in high-energy astronomy: X-ray polarimetry. With many missions currently under development and scheduled to launch as early as 2021, observations of the X-ray polarization of accreting X-ray pulsars will soon be available. As polarization is particularly sensitive to the geometry of the emission region, the upcoming polarimeters will shed new light on the emission mechanism of these objects, provided that we have sound theoretical models that agree with current spectroscopic and timing observation and that can make predictions of the polarization parameters of the emission. We here present a new model for the polarized emission of accreting X-ray pulsars in the accretion column scenario that for the first time takes into account the macroscopic structure and dynamics of the accretion region and the propagation of the radiation towards the observer, including relativistic beaming, gravitational lensing, and quantum electrodynamics. In this paper, we present all the details of the model, while in a companion paper, we apply our model to predict the polarization parameters of the bright X-ray pulsar Hercules X-1.","lang":"eng"}],"citation":{"apa":"Caiazzo, I., &#38; Heyl, J. (2020). Polarization of accreting X-ray pulsars. I. A new model. <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/mnras/staa3428\">https://doi.org/10.1093/mnras/staa3428</a>","ama":"Caiazzo I, Heyl J. Polarization of accreting X-ray pulsars. I. A new model. <i>Monthly Notices of the Royal Astronomical Society</i>. 2020;501(1):109-128. doi:<a href=\"https://doi.org/10.1093/mnras/staa3428\">10.1093/mnras/staa3428</a>","chicago":"Caiazzo, Ilaria, and Jeremy Heyl. “Polarization of Accreting X-Ray Pulsars. I. A New Model.” <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press, 2020. <a href=\"https://doi.org/10.1093/mnras/staa3428\">https://doi.org/10.1093/mnras/staa3428</a>.","ista":"Caiazzo I, Heyl J. 2020. Polarization of accreting X-ray pulsars. I. A new model. Monthly Notices of the Royal Astronomical Society. 501(1), 109–128.","ieee":"I. Caiazzo and J. Heyl, “Polarization of accreting X-ray pulsars. I. A new model,” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 501, no. 1. Oxford University Press, pp. 109–128, 2020.","mla":"Caiazzo, Ilaria, and Jeremy Heyl. “Polarization of Accreting X-Ray Pulsars. I. A New Model.” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 501, no. 1, Oxford University Press, 2020, pp. 109–28, doi:<a href=\"https://doi.org/10.1093/mnras/staa3428\">10.1093/mnras/staa3428</a>.","short":"I. Caiazzo, J. Heyl, Monthly Notices of the Royal Astronomical Society 501 (2020) 109–128."},"publication_identifier":{"issn":["0035-8711"],"eissn":["1365-2966"]},"type":"journal_article","arxiv":1,"date_updated":"2024-10-14T12:32:49Z","year":"2020","title":"Polarization of accreting X-ray pulsars. I. A new model","publisher":"Oxford University Press","page":"109-128","oa":1,"publication":"Monthly Notices of the Royal Astronomical Society","status":"public","external_id":{"arxiv":["2009.00631"]},"quality_controlled":"1","_id":"15220","article_processing_charge":"No","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2009.00631","open_access":"1"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","issue":"1","day":"05","date_created":"2024-03-26T10:33:43Z","keyword":["Space and Planetary Science","Astronomy and Astrophysics"],"publication_status":"published","intvolume":"       501"},{"oa_version":"Preprint","author":[{"first_name":"Ilaria","orcid":"0000-0002-4770-5388","last_name":"Caiazzo","full_name":"Caiazzo, Ilaria","id":"8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d"},{"full_name":"Heyl, Jeremy","first_name":"Jeremy","last_name":"Heyl"}],"abstract":[{"lang":"eng","text":"We employ our new model for the polarized emission of accreting X-ray pulsars to describe the emission from the luminous X-ray pulsar Hercules X-1. In contrast with previous works, our model predicts the polarization parameters independently of spectral formation, and considers the structure and dynamics of the accretion column, as well as the additional effects on propagation due to general relativity and quantum electrodynamics. We find that our model can describe the observed pulse fraction and the pulse shape of the main peak, as well as the modulation of the cyclotron line with phase. We pick two geometries, assuming a single accretion column or two columns at the magnetic poles, that can describe current observations of pulse shape and cyclotron modulation with phase. Both models predict a high polarization fraction, between 60 and 80 per cent in the 1–10 keV range, that is phase and energy dependent, and that peaks at the same phase as the intensity. The phase and energy dependence of the polarization fraction and of the polarization angle can help discern between the different geometries."}],"citation":{"ieee":"I. Caiazzo and J. Heyl, “Polarization of accreting X-ray pulsars – II. Hercules X-1,” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 501, no. 1. Oxford University Press, pp. 129–136, 2020.","mla":"Caiazzo, Ilaria, and Jeremy Heyl. “Polarization of Accreting X-Ray Pulsars – II. Hercules X-1.” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 501, no. 1, Oxford University Press, 2020, pp. 129–36, doi:<a href=\"https://doi.org/10.1093/mnras/staa3429\">10.1093/mnras/staa3429</a>.","ista":"Caiazzo I, Heyl J. 2020. Polarization of accreting X-ray pulsars – II. Hercules X-1. Monthly Notices of the Royal Astronomical Society. 501(1), 129–136.","chicago":"Caiazzo, Ilaria, and Jeremy Heyl. “Polarization of Accreting X-Ray Pulsars – II. Hercules X-1.” <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press, 2020. <a href=\"https://doi.org/10.1093/mnras/staa3429\">https://doi.org/10.1093/mnras/staa3429</a>.","short":"I. Caiazzo, J. Heyl, Monthly Notices of the Royal Astronomical Society 501 (2020) 129–136.","apa":"Caiazzo, I., &#38; Heyl, J. (2020). Polarization of accreting X-ray pulsars – II. Hercules X-1. <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/mnras/staa3429\">https://doi.org/10.1093/mnras/staa3429</a>","ama":"Caiazzo I, Heyl J. Polarization of accreting X-ray pulsars – II. Hercules X-1. <i>Monthly Notices of the Royal Astronomical Society</i>. 2020;501(1):129-136. doi:<a href=\"https://doi.org/10.1093/mnras/staa3429\">10.1093/mnras/staa3429</a>"},"date_updated":"2024-10-14T12:32:58Z","publication_identifier":{"issn":["0035-8711"],"eissn":["1365-2966"]},"arxiv":1,"type":"journal_article","title":"Polarization of accreting X-ray pulsars – II. Hercules X-1","year":"2020","volume":501,"date_published":"2020-11-05T00:00:00Z","extern":"1","language":[{"iso":"eng"}],"article_type":"original","scopus_import":"1","month":"11","doi":"10.1093/mnras/staa3429","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2009.00634","open_access":"1"}],"day":"05","date_created":"2024-03-26T10:34:03Z","issue":"1","intvolume":"       501","keyword":["Space and Planetary Science","Astronomy and Astrophysics"],"publication_status":"published","oa":1,"publisher":"Oxford University Press","page":"129-136","publication":"Monthly Notices of the Royal Astronomical Society","status":"public","external_id":{"arxiv":["2009.00634"]},"quality_controlled":"1","article_processing_charge":"No","_id":"15221"},{"intvolume":"       905","keyword":["Space and Planetary Science","Astronomy and Astrophysics"],"publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2009.02567"}],"date_created":"2024-03-26T10:34:42Z","day":"09","issue":"1","quality_controlled":"1","external_id":{"arxiv":["2009.02567"]},"article_processing_charge":"No","_id":"15223","oa":1,"publisher":"American Astronomical Society","status":"public","publication":"The Astrophysical Journal","date_updated":"2024-04-03T14:13:50Z","arxiv":1,"type":"journal_article","publication_identifier":{"issn":["0004-637X"],"eissn":["1538-4357"]},"title":"A systematic search of Zwicky transient facility data for ultracompact binary LISA-detectable gravitational-wave sources","year":"2020","oa_version":"Preprint","author":[{"full_name":"Burdge, Kevin B.","first_name":"Kevin B.","last_name":"Burdge"},{"full_name":"Prince, Thomas A.","first_name":"Thomas A.","last_name":"Prince"},{"first_name":"Jim","last_name":"Fuller","full_name":"Fuller, Jim"},{"full_name":"Kaplan, David L.","last_name":"Kaplan","first_name":"David L."},{"full_name":"Marsh, Thomas R.","first_name":"Thomas R.","last_name":"Marsh"},{"first_name":"Pier-Emmanuel","last_name":"Tremblay","full_name":"Tremblay, Pier-Emmanuel"},{"full_name":"Zhuang, Zhuyun","last_name":"Zhuang","first_name":"Zhuyun"},{"last_name":"Bellm","first_name":"Eric C.","full_name":"Bellm, Eric C."},{"first_name":"Ilaria","orcid":"0000-0002-4770-5388","last_name":"Caiazzo","full_name":"Caiazzo, Ilaria","id":"8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d"},{"full_name":"Coughlin, Michael W.","first_name":"Michael W.","last_name":"Coughlin"},{"full_name":"Dhillon, Vik S.","first_name":"Vik S.","last_name":"Dhillon"},{"full_name":"Gaensicke, Boris","first_name":"Boris","last_name":"Gaensicke"},{"full_name":"Rodríguez-Gil, Pablo","first_name":"Pablo","last_name":"Rodríguez-Gil"},{"first_name":"Matthew J.","last_name":"Graham","full_name":"Graham, Matthew J."},{"full_name":"Hermes, JJ","first_name":"JJ","last_name":"Hermes"},{"last_name":"Kupfer","first_name":"Thomas","full_name":"Kupfer, Thomas"},{"full_name":"Littlefair, S. P.","first_name":"S. P.","last_name":"Littlefair"},{"full_name":"Mróz, Przemek","last_name":"Mróz","first_name":"Przemek"},{"full_name":"Phinney, E. S.","last_name":"Phinney","first_name":"E. S."},{"full_name":"Roestel, Jan van","last_name":"Roestel","first_name":"Jan van"},{"first_name":"Yuhan","last_name":"Yao","full_name":"Yao, Yuhan"},{"last_name":"Dekany","first_name":"Richard G.","full_name":"Dekany, Richard G."},{"full_name":"Drake, Andrew J.","first_name":"Andrew J.","last_name":"Drake"},{"full_name":"Duev, Dmitry A.","first_name":"Dmitry A.","last_name":"Duev"},{"full_name":"Hale, David","last_name":"Hale","first_name":"David"},{"full_name":"Feeney, Michael","last_name":"Feeney","first_name":"Michael"},{"last_name":"Helou","first_name":"George","full_name":"Helou, George"},{"first_name":"Stephen","last_name":"Kaye","full_name":"Kaye, Stephen"},{"full_name":"Mahabal, Ashish. A.","first_name":"Ashish. A.","last_name":"Mahabal"},{"full_name":"Masci, Frank J.","last_name":"Masci","first_name":"Frank J."},{"full_name":"Riddle, Reed","first_name":"Reed","last_name":"Riddle"},{"full_name":"Smith, Roger","last_name":"Smith","first_name":"Roger"},{"last_name":"Soumagnac","first_name":"Maayane T.","full_name":"Soumagnac, Maayane T."},{"first_name":"S. R.","last_name":"Kulkarni","full_name":"Kulkarni, S. R."}],"citation":{"apa":"Burdge, K. B., Prince, T. A., Fuller, J., Kaplan, D. L., Marsh, T. R., Tremblay, P.-E., … Kulkarni, S. R. (2020). A systematic search of Zwicky transient facility data for ultracompact binary LISA-detectable gravitational-wave sources. <i>The Astrophysical Journal</i>. American Astronomical Society. <a href=\"https://doi.org/10.3847/1538-4357/abc261\">https://doi.org/10.3847/1538-4357/abc261</a>","ama":"Burdge KB, Prince TA, Fuller J, et al. A systematic search of Zwicky transient facility data for ultracompact binary LISA-detectable gravitational-wave sources. <i>The Astrophysical Journal</i>. 2020;905(1). doi:<a href=\"https://doi.org/10.3847/1538-4357/abc261\">10.3847/1538-4357/abc261</a>","ista":"Burdge KB, Prince TA, Fuller J, Kaplan DL, Marsh TR, Tremblay P-E, Zhuang Z, Bellm EC, Caiazzo I, Coughlin MW, Dhillon VS, Gaensicke B, Rodríguez-Gil P, Graham MJ, Hermes J, Kupfer T, Littlefair SP, Mróz P, Phinney ES, Roestel J van, Yao Y, Dekany RG, Drake AJ, Duev DA, Hale D, Feeney M, Helou G, Kaye S, Mahabal AA, Masci FJ, Riddle R, Smith R, Soumagnac MT, Kulkarni SR. 2020. A systematic search of Zwicky transient facility data for ultracompact binary LISA-detectable gravitational-wave sources. The Astrophysical Journal. 905(1), 32.","chicago":"Burdge, Kevin B., Thomas A. Prince, Jim Fuller, David L. Kaplan, Thomas R. Marsh, Pier-Emmanuel Tremblay, Zhuyun Zhuang, et al. “A Systematic Search of Zwicky Transient Facility Data for Ultracompact Binary LISA-Detectable Gravitational-Wave Sources.” <i>The Astrophysical Journal</i>. American Astronomical Society, 2020. <a href=\"https://doi.org/10.3847/1538-4357/abc261\">https://doi.org/10.3847/1538-4357/abc261</a>.","mla":"Burdge, Kevin B., et al. “A Systematic Search of Zwicky Transient Facility Data for Ultracompact Binary LISA-Detectable Gravitational-Wave Sources.” <i>The Astrophysical Journal</i>, vol. 905, no. 1, 32, American Astronomical Society, 2020, doi:<a href=\"https://doi.org/10.3847/1538-4357/abc261\">10.3847/1538-4357/abc261</a>.","ieee":"K. B. Burdge <i>et al.</i>, “A systematic search of Zwicky transient facility data for ultracompact binary LISA-detectable gravitational-wave sources,” <i>The Astrophysical Journal</i>, vol. 905, no. 1. American Astronomical Society, 2020.","short":"K.B. Burdge, T.A. Prince, J. Fuller, D.L. Kaplan, T.R. Marsh, P.-E. Tremblay, Z. Zhuang, E.C. Bellm, I. Caiazzo, M.W. Coughlin, V.S. Dhillon, B. Gaensicke, P. Rodríguez-Gil, M.J. Graham, J. Hermes, T. Kupfer, S.P. Littlefair, P. Mróz, E.S. Phinney, J. van Roestel, Y. Yao, R.G. Dekany, A.J. Drake, D.A. Duev, D. Hale, M. Feeney, G. Helou, S. Kaye, A.A. Mahabal, F.J. Masci, R. Riddle, R. Smith, M.T. Soumagnac, S.R. Kulkarni, The Astrophysical Journal 905 (2020)."},"article_number":"32","abstract":[{"text":"Using photometry collected with the Zwicky Transient Facility, we are conducting an ongoing survey for binary systems with short orbital periods (\r\n with the goal of identifying new gravitational-wave sources detectable by the upcoming Laser Interferometer Space Antenna (LISA). We present a sample of 15 binary systems discovered thus far, with orbital periods ranging from 6.91 to 56.35 minutes. Of the 15 systems, seven are eclipsing systems that do not show signs of significant mass transfer. Additionally, we have discovered two AM Canum Venaticorum systems and six systems exhibiting primarily ellipsoidal variations in their lightcurves. We present follow-up spectroscopy and high-speed photometry confirming the nature of these systems, estimates of their LISA signal-to-noise ratios, and a discussion of their physical characteristics.","lang":"eng"}],"scopus_import":"1","month":"12","doi":"10.3847/1538-4357/abc261","volume":905,"date_published":"2020-12-09T00:00:00Z","language":[{"iso":"eng"}],"extern":"1","article_type":"original"},{"quality_controlled":"1","external_id":{"arxiv":["2009.03374"]},"_id":"15224","article_processing_charge":"No","publisher":"American Astronomical Society","oa":1,"status":"public","publication":"The Astrophysical Journal Letters","keyword":["Space and Planetary Science","Astronomy and Astrophysics"],"publication_status":"published","intvolume":"       901","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2009.03374","open_access":"1"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","issue":"1","day":"22","date_created":"2024-03-26T10:35:02Z","scopus_import":"1","doi":"10.3847/2041-8213/abb5f7","month":"09","volume":901,"date_published":"2020-09-22T00:00:00Z","article_type":"original","language":[{"iso":"eng"}],"extern":"1","arxiv":1,"type":"journal_article","publication_identifier":{"issn":["2041-8205"],"eissn":["2041-8213"]},"date_updated":"2024-10-14T12:33:09Z","year":"2020","title":"Intermediate-mass stars become magnetic white dwarfs","author":[{"last_name":"Caiazzo","orcid":"0000-0002-4770-5388","first_name":"Ilaria","id":"8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d","full_name":"Caiazzo, Ilaria"},{"last_name":"Heyl","first_name":"Jeremy","full_name":"Heyl, Jeremy"},{"last_name":"Richer","first_name":"Harvey","full_name":"Richer, Harvey"},{"full_name":"Cummings, Jeffrey","first_name":"Jeffrey","last_name":"Cummings"},{"full_name":"Fleury, Leesa","last_name":"Fleury","first_name":"Leesa"},{"full_name":"Hegarty, James","last_name":"Hegarty","first_name":"James"},{"first_name":"Jason","last_name":"Kalirai","full_name":"Kalirai, Jason"},{"first_name":"Ronan","last_name":"Kerr","full_name":"Kerr, Ronan"},{"full_name":"Thiele, Sarah","last_name":"Thiele","first_name":"Sarah"},{"last_name":"Tremblay","first_name":"Pier-Emmanuel","full_name":"Tremblay, Pier-Emmanuel"},{"full_name":"Villanueva, Michael","last_name":"Villanueva","first_name":"Michael"}],"oa_version":"Preprint","citation":{"ieee":"I. Caiazzo <i>et al.</i>, “Intermediate-mass stars become magnetic white dwarfs,” <i>The Astrophysical Journal Letters</i>, vol. 901, no. 1. American Astronomical Society, 2020.","mla":"Caiazzo, Ilaria, et al. “Intermediate-Mass Stars Become Magnetic White Dwarfs.” <i>The Astrophysical Journal Letters</i>, vol. 901, no. 1, L14, American Astronomical Society, 2020, doi:<a href=\"https://doi.org/10.3847/2041-8213/abb5f7\">10.3847/2041-8213/abb5f7</a>.","chicago":"Caiazzo, Ilaria, Jeremy Heyl, Harvey Richer, Jeffrey Cummings, Leesa Fleury, James Hegarty, Jason Kalirai, et al. “Intermediate-Mass Stars Become Magnetic White Dwarfs.” <i>The Astrophysical Journal Letters</i>. American Astronomical Society, 2020. <a href=\"https://doi.org/10.3847/2041-8213/abb5f7\">https://doi.org/10.3847/2041-8213/abb5f7</a>.","ista":"Caiazzo I, Heyl J, Richer H, Cummings J, Fleury L, Hegarty J, Kalirai J, Kerr R, Thiele S, Tremblay P-E, Villanueva M. 2020. Intermediate-mass stars become magnetic white dwarfs. The Astrophysical Journal Letters. 901(1), L14.","short":"I. Caiazzo, J. Heyl, H. Richer, J. Cummings, L. Fleury, J. Hegarty, J. Kalirai, R. Kerr, S. Thiele, P.-E. Tremblay, M. Villanueva, The Astrophysical Journal Letters 901 (2020).","apa":"Caiazzo, I., Heyl, J., Richer, H., Cummings, J., Fleury, L., Hegarty, J., … Villanueva, M. (2020). Intermediate-mass stars become magnetic white dwarfs. <i>The Astrophysical Journal Letters</i>. American Astronomical Society. <a href=\"https://doi.org/10.3847/2041-8213/abb5f7\">https://doi.org/10.3847/2041-8213/abb5f7</a>","ama":"Caiazzo I, Heyl J, Richer H, et al. Intermediate-mass stars become magnetic white dwarfs. <i>The Astrophysical Journal Letters</i>. 2020;901(1). doi:<a href=\"https://doi.org/10.3847/2041-8213/abb5f7\">10.3847/2041-8213/abb5f7</a>"},"article_number":"L14","abstract":[{"text":"When a star exhausts its nuclear fuel, it either explodes as a supernova or more quiescently becomes a white dwarf, an object about half the mass of our Sun with a radius of about that of the Earth. About one-fifth of white dwarfs exhibit the presence of magnetic fields, whose origin has long been debated as either the product of previous stages of evolution or of binary interactions. We here report the discovery of two massive and magnetic white-dwarf members of young star clusters in the Gaia second data release (DR2) database, while a third massive and magnetic cluster white dwarf was already reported in a previous paper. These stars are most likely the product of single-star evolution and therefore challenge the merger scenario as the only way to produce magnetic white dwarfs. The progenitor masses of these stars are all above 5 solar masses, and there are only two other cluster white dwarfs whose distances have been unambiguously measured with Gaia and whose progenitors' masses fall in this range. This high incidence of magnetic white dwarfs indicates that intermediate-mass progenitors are more likely to produce magnetic remnants and that a fraction of magnetic white dwarfs forms from intermediate-mass stars.","lang":"eng"}]},{"date_published":"2020-12-13T00:00:00Z","volume":11444,"extern":"1","language":[{"iso":"eng"}],"scopus_import":"1","month":"12","doi":"10.1117/12.2562811","author":[{"first_name":"Herman L.","last_name":"Marshall","full_name":"Marshall, Herman L."},{"first_name":"Sarah","last_name":"Heine","full_name":"Heine, Sarah"},{"full_name":"Garner, Alan","last_name":"Garner","first_name":"Alan"},{"full_name":"Gullikson, Eric","last_name":"Gullikson","first_name":"Eric"},{"full_name":"Guenther, Moritz","first_name":"Moritz","last_name":"Guenther"},{"first_name":"Christopher","last_name":"Leitz","full_name":"Leitz, Christopher"},{"full_name":"Masterson, Rebecca","first_name":"Rebecca","last_name":"Masterson"},{"first_name":"Eric","last_name":"Miller","full_name":"Miller, Eric"},{"full_name":"Zhang, William","last_name":"Zhang","first_name":"William"},{"last_name":"Boissay Malaquin","first_name":"Rozenn","full_name":"Boissay Malaquin, Rozenn"},{"id":"8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d","full_name":"Caiazzo, Ilaria","last_name":"Caiazzo","first_name":"Ilaria","orcid":"0000-0002-4770-5388"},{"first_name":"Deepto","last_name":"Chakrabarty","full_name":"Chakrabarty, Deepto"},{"full_name":"Davidson, Rosemary","first_name":"Rosemary","last_name":"Davidson"},{"last_name":"Gallo","first_name":"Luigi","full_name":"Gallo, Luigi"},{"last_name":"Heilmann","first_name":"Ralf K.","full_name":"Heilmann, Ralf K."},{"last_name":"Heyl","first_name":"Jeremy","full_name":"Heyl, Jeremy"},{"last_name":"Kara","first_name":"Erin","full_name":"Kara, Erin"},{"first_name":"Alan","last_name":"Marscher","full_name":"Marscher, Alan"},{"first_name":"Norbert","last_name":"Schulz","full_name":"Schulz, Norbert"}],"conference":{"name":"Astronomical Telescopes + Instrumentation","location":"Virtual","start_date":"2020-12-14","end_date":"2020-12-18"},"oa_version":"Preprint","abstract":[{"text":"We describe a new implementation of a broad-band soft X-ray polarimeter, substantially based on a previous design. This implementation, the Pioneer Soft X-ray Polarimeter (PiSoX) is a SmallSat, designed for NASA’s call for Astrophysics Pioneers, small missions that could be CubeSats, balloon experiments, or SmallSats. As in REDSoX, the grating arrangement is designed optimally for the purpose of polarimetry with broad-band focussing optics by matching the dispersion of the spectrometer channels to laterally graded multilayers (LGMLs). The system can achieve polarization modulation factors over 90%. For PiSoX, the optics are lightweight Si mirrors in a one-bounce parabolic configuration. High efficiency, blazed gratings from opposite sectors are oriented to disperse to a LGML forming a channel covering the wavelength range from 35 Å to 75 Å (165 - 350 eV). Upon satellite rotation, the intensities of the dispersed spectra, after reflection and polarizing by the LGMLs, give the three Stokes parameters needed to determine a source’s linear polarization fraction and orientation. The design can be extended to higher energies as LGMLs are developed further. We describe examples of the potential scientific return from instruments based on this design.","lang":"eng"}],"citation":{"ama":"Marshall HL, Heine S, Garner A, et al. A small satellite version of a soft x-ray polarimeter. In: <i>Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray</i>. Vol 11444. SPIE; 2020. doi:<a href=\"https://doi.org/10.1117/12.2562811\">10.1117/12.2562811</a>","apa":"Marshall, H. L., Heine, S., Garner, A., Gullikson, E., Guenther, M., Leitz, C., … Schulz, N. (2020). A small satellite version of a soft x-ray polarimeter. In <i>Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray</i> (Vol. 11444). Virtual: SPIE. <a href=\"https://doi.org/10.1117/12.2562811\">https://doi.org/10.1117/12.2562811</a>","short":"H.L. Marshall, S. Heine, A. Garner, E. Gullikson, M. Guenther, C. Leitz, R. Masterson, E. Miller, W. Zhang, R. Boissay Malaquin, I. Caiazzo, D. Chakrabarty, R. Davidson, L. Gallo, R.K. Heilmann, J. Heyl, E. Kara, A. Marscher, N. Schulz, in:, Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray, SPIE, 2020.","ieee":"H. L. Marshall <i>et al.</i>, “A small satellite version of a soft x-ray polarimeter,” in <i>Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray</i>, Virtual, 2020, vol. 11444.","mla":"Marshall, Herman L., et al. “A Small Satellite Version of a Soft X-Ray Polarimeter.” <i>Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray</i>, vol. 11444, 114442Y, SPIE, 2020, doi:<a href=\"https://doi.org/10.1117/12.2562811\">10.1117/12.2562811</a>.","ista":"Marshall HL, Heine S, Garner A, Gullikson E, Guenther M, Leitz C, Masterson R, Miller E, Zhang W, Boissay Malaquin R, Caiazzo I, Chakrabarty D, Davidson R, Gallo L, Heilmann RK, Heyl J, Kara E, Marscher A, Schulz N. 2020. A small satellite version of a soft x-ray polarimeter. Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray. Astronomical Telescopes + Instrumentation vol. 11444, 114442Y.","chicago":"Marshall, Herman L., Sarah Heine, Alan Garner, Eric Gullikson, Moritz Guenther, Christopher Leitz, Rebecca Masterson, et al. “A Small Satellite Version of a Soft X-Ray Polarimeter.” In <i>Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray</i>, Vol. 11444. SPIE, 2020. <a href=\"https://doi.org/10.1117/12.2562811\">https://doi.org/10.1117/12.2562811</a>."},"article_number":"114442Y","publication_identifier":{"eissn":["1996-756X"],"isbn":["978-151063675-0"]},"arxiv":1,"type":"conference","date_updated":"2024-04-08T06:58:50Z","year":"2020","title":"A small satellite version of a soft x-ray polarimeter","publisher":"SPIE","oa":1,"publication":"Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray","status":"public","external_id":{"arxiv":["2012.02829"]},"quality_controlled":"1","_id":"15228","article_processing_charge":"No","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2012.02829"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","day":"13","date_created":"2024-03-26T10:36:20Z","publication_status":"published","intvolume":"     11444"},{"conference":{"name":"Astronomical Telescopes + Instrumentation","end_date":"2020-12-18","start_date":"2020-12-14","location":"Virtual"},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"None","author":[{"first_name":"Jeremy","last_name":"Heyl","full_name":"Heyl, Jeremy"},{"first_name":"Ilaria","orcid":"0000-0002-4770-5388","last_name":"Caiazzo","full_name":"Caiazzo, Ilaria","id":"8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d"},{"full_name":"Gallagher, Sarah","last_name":"Gallagher","first_name":"Sarah"},{"full_name":"Hoffman, Kelsey","first_name":"Kelsey","last_name":"Hoffman"},{"full_name":"Safi-Harb, Samar","first_name":"Samar","last_name":"Safi-Harb"}],"date_created":"2024-03-26T10:36:40Z","day":"13","article_number":"114442A","citation":{"short":"J. Heyl, I. Caiazzo, S. Gallagher, K. Hoffman, S. Safi-Harb, in:, Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray, SPIE, 2020.","chicago":"Heyl, Jeremy, Ilaria Caiazzo, Sarah Gallagher, Kelsey Hoffman, and Samar Safi-Harb. “The Colibrì High-Resolution x-Ray Telescope.” In <i>Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray</i>, Vol. 11444. SPIE, 2020. <a href=\"https://doi.org/10.1117/12.2562625\">https://doi.org/10.1117/12.2562625</a>.","ista":"Heyl J, Caiazzo I, Gallagher S, Hoffman K, Safi-Harb S. 2020. The Colibrì high-resolution x-ray telescope. Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray. Astronomical Telescopes + Instrumentation vol. 11444, 114442A.","mla":"Heyl, Jeremy, et al. “The Colibrì High-Resolution x-Ray Telescope.” <i>Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray</i>, vol. 11444, 114442A, SPIE, 2020, doi:<a href=\"https://doi.org/10.1117/12.2562625\">10.1117/12.2562625</a>.","ieee":"J. Heyl, I. Caiazzo, S. Gallagher, K. Hoffman, and S. Safi-Harb, “The Colibrì high-resolution x-ray telescope,” in <i>Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray</i>, Virtual, 2020, vol. 11444.","ama":"Heyl J, Caiazzo I, Gallagher S, Hoffman K, Safi-Harb S. The Colibrì high-resolution x-ray telescope. In: <i>Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray</i>. Vol 11444. SPIE; 2020. doi:<a href=\"https://doi.org/10.1117/12.2562625\">10.1117/12.2562625</a>","apa":"Heyl, J., Caiazzo, I., Gallagher, S., Hoffman, K., &#38; Safi-Harb, S. (2020). The Colibrì high-resolution x-ray telescope. In <i>Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray</i> (Vol. 11444). Virtual: SPIE. <a href=\"https://doi.org/10.1117/12.2562625\">https://doi.org/10.1117/12.2562625</a>"},"abstract":[{"lang":"eng","text":"We propose a high-time-resolution, high-spectral-resolution X-ray telescope that uses transition-edge sensors (TES) as detectors and collector optics to direct the X-rays onto the focal plane, providing a large effective area in a small satellite. The key science driver of the instrument is to study neutron stars and accreting black holes. The proposed instrument is built upon two technologies that are already at high TRL: TES X-ray detectors and collector optics."}],"date_updated":"2024-04-08T06:59:43Z","type":"conference","publication_identifier":{"eissn":["1996-756X"],"isbn":["978-151063675-0"]},"title":"The Colibrì high-resolution x-ray telescope","intvolume":"     11444","year":"2020","publication_status":"published","volume":11444,"date_published":"2020-12-13T00:00:00Z","publisher":"SPIE","status":"public","language":[{"iso":"eng"}],"extern":"1","publication":"Space Telescopes and Instrumentation 2020: Ultraviolet to Gamma Ray","quality_controlled":"1","scopus_import":"1","month":"12","_id":"15229","doi":"10.1117/12.2562625","article_processing_charge":"No"},{"quality_controlled":"1","_id":"15286","doi":"10.1017/s1431927620021881","article_processing_charge":"No","month":"08","volume":26,"date_published":"2020-08-01T00:00:00Z","corr_author":"1","page":"2518-2519","department":[{"_id":"FlSc"},{"_id":"EM-Fac"}],"publisher":"Oxford University Press","language":[{"iso":"eng"}],"status":"public","publication":"Microscopy and Microanalysis","article_type":"original","date_updated":"2024-10-09T21:08:43Z","type":"journal_article","publication_identifier":{"issn":["1431-9276"],"eissn":["1435-8115"]},"title":"Cryo-electron tomography workflows for quantitative analysis of actin networks involved in cell migration","intvolume":"        26","year":"2020","publication_status":"published","keyword":["Instrumentation"],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"None","author":[{"id":"404F5528-F248-11E8-B48F-1D18A9856A87","full_name":"Fäßler, Florian","last_name":"Fäßler","orcid":"0000-0001-7149-769X","first_name":"Florian"},{"id":"38C393BE-F248-11E8-B48F-1D18A9856A87","full_name":"Dimchev, Georgi A","last_name":"Dimchev","orcid":"0000-0001-8370-6161","first_name":"Georgi A"},{"last_name":"Hodirnau","first_name":"Victor-Valentin","orcid":"0000-0003-3904-947X","id":"3661B498-F248-11E8-B48F-1D18A9856A87","full_name":"Hodirnau, Victor-Valentin"},{"id":"45FD126C-F248-11E8-B48F-1D18A9856A87","full_name":"Zens, Bettina","last_name":"Zens","first_name":"Bettina","orcid":"0000-0002-9561-1239"},{"first_name":"Christoph","last_name":"Möhl","full_name":"Möhl, Christoph"},{"full_name":"Bradke, Frank","first_name":"Frank","last_name":"Bradke"},{"full_name":"Schur, Florian KM","id":"48AD8942-F248-11E8-B48F-1D18A9856A87","first_name":"Florian KM","orcid":"0000-0003-4790-8078","last_name":"Schur"}],"date_created":"2024-04-03T09:40:11Z","day":"01","citation":{"short":"F. Fäßler, G.A. Dimchev, V.-V. Hodirnau, B. Zens, C. Möhl, F. Bradke, F.K. Schur, Microscopy and Microanalysis 26 (2020) 2518–2519.","ista":"Fäßler F, Dimchev GA, Hodirnau V-V, Zens B, Möhl C, Bradke F, Schur FK. 2020. Cryo-electron tomography workflows for quantitative analysis of actin networks involved in cell migration. Microscopy and Microanalysis. 26(S2), 2518–2519.","chicago":"Fäßler, Florian, Georgi A Dimchev, Victor-Valentin Hodirnau, Bettina Zens, Christoph Möhl, Frank Bradke, and Florian KM Schur. “Cryo-Electron Tomography Workflows for Quantitative Analysis of Actin Networks Involved in Cell Migration.” <i>Microscopy and Microanalysis</i>. Oxford University Press, 2020. <a href=\"https://doi.org/10.1017/s1431927620021881\">https://doi.org/10.1017/s1431927620021881</a>.","ieee":"F. Fäßler <i>et al.</i>, “Cryo-electron tomography workflows for quantitative analysis of actin networks involved in cell migration,” <i>Microscopy and Microanalysis</i>, vol. 26, no. S2. Oxford University Press, pp. 2518–2519, 2020.","mla":"Fäßler, Florian, et al. “Cryo-Electron Tomography Workflows for Quantitative Analysis of Actin Networks Involved in Cell Migration.” <i>Microscopy and Microanalysis</i>, vol. 26, no. S2, Oxford University Press, 2020, pp. 2518–19, doi:<a href=\"https://doi.org/10.1017/s1431927620021881\">10.1017/s1431927620021881</a>.","ama":"Fäßler F, Dimchev GA, Hodirnau V-V, et al. Cryo-electron tomography workflows for quantitative analysis of actin networks involved in cell migration. <i>Microscopy and Microanalysis</i>. 2020;26(S2):2518-2519. doi:<a href=\"https://doi.org/10.1017/s1431927620021881\">10.1017/s1431927620021881</a>","apa":"Fäßler, F., Dimchev, G. A., Hodirnau, V.-V., Zens, B., Möhl, C., Bradke, F., &#38; Schur, F. K. (2020). Cryo-electron tomography workflows for quantitative analysis of actin networks involved in cell migration. <i>Microscopy and Microanalysis</i>. Oxford University Press. <a href=\"https://doi.org/10.1017/s1431927620021881\">https://doi.org/10.1017/s1431927620021881</a>"},"issue":"S2"},{"article_type":"original","language":[{"iso":"eng"}],"has_accepted_license":"1","file_date_updated":"2025-03-11T08:27:40Z","date_published":"2020-09-20T00:00:00Z","volume":2020,"doi":"10.17912/MICROPUB.BIOLOGY.000303","month":"09","citation":{"ama":"Kazatskaya A, Yuan L, Amin-Wetzel NP, Philbrook A, de Bono M, Sengupta P. The URX oxygen-sensing neurons in C. elegans are ciliated. <i>microPublication Biology</i>. 2020;2020(9). doi:<a href=\"https://doi.org/10.17912/MICROPUB.BIOLOGY.000303\">10.17912/MICROPUB.BIOLOGY.000303</a>","apa":"Kazatskaya, A., Yuan, L., Amin-Wetzel, N. P., Philbrook, A., de Bono, M., &#38; Sengupta, P. (2020). The URX oxygen-sensing neurons in C. elegans are ciliated. <i>MicroPublication Biology</i>. Caltech Library. <a href=\"https://doi.org/10.17912/MICROPUB.BIOLOGY.000303\">https://doi.org/10.17912/MICROPUB.BIOLOGY.000303</a>","short":"A. Kazatskaya, L. Yuan, N.P. Amin-Wetzel, A. Philbrook, M. de Bono, P. Sengupta, MicroPublication Biology 2020 (2020).","mla":"Kazatskaya, Anna, et al. “The URX Oxygen-Sensing Neurons in C. Elegans Are Ciliated.” <i>MicroPublication Biology</i>, vol. 2020, no. 9, 303, Caltech Library, 2020, doi:<a href=\"https://doi.org/10.17912/MICROPUB.BIOLOGY.000303\">10.17912/MICROPUB.BIOLOGY.000303</a>.","ieee":"A. Kazatskaya, L. Yuan, N. P. Amin-Wetzel, A. Philbrook, M. de Bono, and P. Sengupta, “The URX oxygen-sensing neurons in C. elegans are ciliated,” <i>microPublication Biology</i>, vol. 2020, no. 9. Caltech Library, 2020.","ista":"Kazatskaya A, Yuan L, Amin-Wetzel NP, Philbrook A, de Bono M, Sengupta P. 2020. The URX oxygen-sensing neurons in C. elegans are ciliated. microPublication Biology. 2020(9), 303.","chicago":"Kazatskaya, Anna, Lisa Yuan, Niko Paresh Amin-Wetzel, Alison Philbrook, Mario de Bono, and Piali Sengupta. “The URX Oxygen-Sensing Neurons in C. Elegans Are Ciliated.” <i>MicroPublication Biology</i>. Caltech Library, 2020. <a href=\"https://doi.org/10.17912/MICROPUB.BIOLOGY.000303\">https://doi.org/10.17912/MICROPUB.BIOLOGY.000303</a>."},"article_number":"303","author":[{"full_name":"Kazatskaya, Anna","last_name":"Kazatskaya","first_name":"Anna"},{"full_name":"Yuan, Lisa","first_name":"Lisa","last_name":"Yuan"},{"first_name":"Niko Paresh","last_name":"Amin-Wetzel","full_name":"Amin-Wetzel, Niko Paresh","id":"E95D3014-9D8C-11E9-9C80-D2F8E5697425"},{"full_name":"Philbrook, Alison","last_name":"Philbrook","first_name":"Alison"},{"id":"4E3FF80E-F248-11E8-B48F-1D18A9856A87","full_name":"de Bono, Mario","last_name":"de Bono","first_name":"Mario","orcid":"0000-0001-8347-0443"},{"last_name":"Sengupta","first_name":"Piali","full_name":"Sengupta, Piali"}],"oa_version":"Published Version","year":"2020","title":"The URX oxygen-sensing neurons in C. elegans are ciliated","type":"journal_article","publication_identifier":{"eissn":["2578-9430"]},"date_updated":"2025-03-11T08:30:41Z","OA_place":"publisher","status":"public","publication":"microPublication Biology","department":[{"_id":"MaDe"}],"publisher":"Caltech Library","file":[{"success":1,"file_name":"2020_MicroPublBio_Kazatskaya.pdf","date_created":"2025-03-11T08:27:40Z","file_size":1486239,"checksum":"14a7cad20775521ce85e0e3c77aa7936","access_level":"open_access","date_updated":"2025-03-11T08:27:40Z","content_type":"application/pdf","creator":"dernst","relation":"main_file","file_id":"19383"}],"oa":1,"_id":"19306","OA_type":"gold","article_processing_charge":"Yes","acknowledgement":"We thank Maureen Barr, Martin Harterink, Max Heiman and Inna Nechipurenko for reagents, the Caenorhabditis Genetics Center for strains, and the Sengupta lab for comments and advice.\r\nThis work was funded in part by the NIH (R35 GM122463 – P.S., and F32 DC018453 – A.P.), and the EMBO (ALTF 302-2019 – N.A-W.).","external_id":{"pmid":["33005885"]},"quality_controlled":"1","ddc":["570"],"issue":"9","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"date_created":"2025-03-07T08:21:51Z","day":"20","pmid":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_status":"published","intvolume":"      2020","DOAJ_listed":"1"},{"has_accepted_license":"1","file_date_updated":"2020-10-08T08:34:53Z","date_published":"2020-06-01T00:00:00Z","volume":26,"article_type":"original","language":[{"iso":"eng"}],"scopus_import":"1","doi":"10.1109/TVCG.2018.2883628","month":"06","author":[{"last_name":"Hikaru","first_name":"Ibayashi","full_name":"Hikaru, Ibayashi"},{"full_name":"Wojtan, Christopher J","id":"3C61F1D2-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-6646-5546","first_name":"Christopher J","last_name":"Wojtan"},{"full_name":"Thuerey, Nils","last_name":"Thuerey","first_name":"Nils"},{"full_name":"Igarashi, Takeo","last_name":"Igarashi","first_name":"Takeo"},{"full_name":"Ando, Ryoichi","last_name":"Ando","first_name":"Ryoichi"}],"oa_version":"Submitted Version","citation":{"apa":"Hikaru, I., Wojtan, C., Thuerey, N., Igarashi, T., &#38; Ando, R. (2020). Simulating liquids on dynamically warping grids. <i>IEEE Transactions on Visualization and Computer Graphics</i>. IEEE. <a href=\"https://doi.org/10.1109/TVCG.2018.2883628\">https://doi.org/10.1109/TVCG.2018.2883628</a>","ama":"Hikaru I, Wojtan C, Thuerey N, Igarashi T, Ando R. Simulating liquids on dynamically warping grids. <i>IEEE Transactions on Visualization and Computer Graphics</i>. 2020;26(6):2288-2302. doi:<a href=\"https://doi.org/10.1109/TVCG.2018.2883628\">10.1109/TVCG.2018.2883628</a>","chicago":"Hikaru, Ibayashi, Chris Wojtan, Nils Thuerey, Takeo Igarashi, and Ryoichi Ando. “Simulating Liquids on Dynamically Warping Grids.” <i>IEEE Transactions on Visualization and Computer Graphics</i>. IEEE, 2020. <a href=\"https://doi.org/10.1109/TVCG.2018.2883628\">https://doi.org/10.1109/TVCG.2018.2883628</a>.","ista":"Hikaru I, Wojtan C, Thuerey N, Igarashi T, Ando R. 2020. Simulating liquids on dynamically warping grids. IEEE Transactions on Visualization and Computer Graphics. 26(6), 2288–2302.","ieee":"I. Hikaru, C. Wojtan, N. Thuerey, T. Igarashi, and R. Ando, “Simulating liquids on dynamically warping grids,” <i>IEEE Transactions on Visualization and Computer Graphics</i>, vol. 26, no. 6. IEEE, pp. 2288–2302, 2020.","mla":"Hikaru, Ibayashi, et al. “Simulating Liquids on Dynamically Warping Grids.” <i>IEEE Transactions on Visualization and Computer Graphics</i>, vol. 26, no. 6, IEEE, 2020, pp. 2288–302, doi:<a href=\"https://doi.org/10.1109/TVCG.2018.2883628\">10.1109/TVCG.2018.2883628</a>.","short":"I. Hikaru, C. Wojtan, N. Thuerey, T. Igarashi, R. Ando, IEEE Transactions on Visualization and Computer Graphics 26 (2020) 2288–2302."},"abstract":[{"text":"We introduce dynamically warping grids for adaptive liquid simulation. Our primary contributions are a strategy for dynamically deforming regular grids over the course of a simulation and a method for efficiently utilizing these deforming grids for liquid simulation. Prior work has shown that unstructured grids are very effective for adaptive fluid simulations. However, unstructured grids often lead to complicated implementations and a poor cache hit rate due to inconsistent memory access. Regular grids, on the other hand, provide a fast, fixed memory access pattern and straightforward implementation. Our method combines the advantages of both: we leverage the simplicity of regular grids while still achieving practical and controllable spatial adaptivity. We demonstrate that our method enables adaptive simulations that are fast, flexible, and robust to null-space issues. At the same time, our method is simple to implement and takes advantage of existing highly-tuned algorithms.","lang":"eng"}],"type":"journal_article","publication_identifier":{"issn":["1077-2626"],"eissn":["1941-0506"]},"date_updated":"2025-07-10T11:52:55Z","year":"2020","title":"Simulating liquids on dynamically warping grids","page":"2288-2302","department":[{"_id":"ChWo"}],"publisher":"IEEE","oa":1,"file":[{"success":1,"file_name":"preprint.pdf","file_size":21910098,"date_created":"2020-10-08T08:34:53Z","checksum":"8d4c55443a0ee335bb5bb652de503042","access_level":"open_access","content_type":"application/pdf","date_updated":"2020-10-08T08:34:53Z","creator":"wojtan","relation":"main_file","file_id":"8626"}],"status":"public","publication":"IEEE Transactions on Visualization and Computer Graphics","quality_controlled":"1","external_id":{"pmid":["30507534"],"isi":["000532295600014"]},"ddc":["006"],"isi":1,"_id":"5681","article_processing_charge":"No","acknowledgement":"This work was partially supported by JSPS Grant-in-Aid forYoung Scientists (Start-up) 16H07410, the ERC StartingGrantsrealFlow(StG-2015-637014) andBigSplash(StG-2014-638176). This research was supported by the Scientific Ser-vice Units (SSU) of IST Austria through resources providedby Scientific Computing. We would like to express my grati-tude to Nobuyuki Umetani and Tomas Skrivan for insight-ful discussion.","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","issue":"6","day":"01","date_created":"2018-12-16T22:59:21Z","pmid":1,"acknowledged_ssus":[{"_id":"ScienComp"}],"publication_status":"published","intvolume":"        26"},{"related_material":{"link":[{"url":"https://doi.org/10.1007/s10955-020-02671-4","relation":"erratum"}]},"title":"Non-commutative calculus, optimal transport and functional inequalities  in dissipative quantum systems","year":"2020","date_updated":"2025-06-12T07:27:20Z","publication_identifier":{"issn":["0022-4715"],"eissn":["1572-9613"]},"arxiv":1,"type":"journal_article","abstract":[{"text":"We study dynamical optimal transport metrics between density matricesassociated to symmetric Dirichlet forms on finite-dimensional C∗-algebras.  Our settingcovers  arbitrary  skew-derivations  and  it  provides  a  unified  framework  that  simultaneously  generalizes  recently  constructed  transport  metrics  for  Markov  chains,  Lindblad  equations,  and  the  Fermi  Ornstein–Uhlenbeck  semigroup.   We  develop  a  non-nommutative differential calculus that allows us to obtain non-commutative Ricci curvature  bounds,  logarithmic  Sobolev  inequalities,  transport-entropy  inequalities,  andspectral gap estimates.","lang":"eng"}],"citation":{"short":"E.A. Carlen, J. Maas, Journal of Statistical Physics 178 (2020) 319–378.","chicago":"Carlen, Eric A., and Jan Maas. “Non-Commutative Calculus, Optimal Transport and Functional Inequalities  in Dissipative Quantum Systems.” <i>Journal of Statistical Physics</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1007/s10955-019-02434-w\">https://doi.org/10.1007/s10955-019-02434-w</a>.","ista":"Carlen EA, Maas J. 2020. Non-commutative calculus, optimal transport and functional inequalities  in dissipative quantum systems. Journal of Statistical Physics. 178(2), 319–378.","ieee":"E. A. Carlen and J. Maas, “Non-commutative calculus, optimal transport and functional inequalities  in dissipative quantum systems,” <i>Journal of Statistical Physics</i>, vol. 178, no. 2. Springer Nature, pp. 319–378, 2020.","mla":"Carlen, Eric A., and Jan Maas. “Non-Commutative Calculus, Optimal Transport and Functional Inequalities  in Dissipative Quantum Systems.” <i>Journal of Statistical Physics</i>, vol. 178, no. 2, Springer Nature, 2020, pp. 319–78, doi:<a href=\"https://doi.org/10.1007/s10955-019-02434-w\">10.1007/s10955-019-02434-w</a>.","ama":"Carlen EA, Maas J. Non-commutative calculus, optimal transport and functional inequalities  in dissipative quantum systems. <i>Journal of Statistical Physics</i>. 2020;178(2):319-378. doi:<a href=\"https://doi.org/10.1007/s10955-019-02434-w\">10.1007/s10955-019-02434-w</a>","apa":"Carlen, E. A., &#38; Maas, J. (2020). Non-commutative calculus, optimal transport and functional inequalities  in dissipative quantum systems. <i>Journal of Statistical Physics</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s10955-019-02434-w\">https://doi.org/10.1007/s10955-019-02434-w</a>"},"oa_version":"Published Version","author":[{"first_name":"Eric A.","last_name":"Carlen","full_name":"Carlen, Eric A."},{"last_name":"Maas","orcid":"0000-0002-0845-1338","first_name":"Jan","id":"4C5696CE-F248-11E8-B48F-1D18A9856A87","full_name":"Maas, Jan"}],"doi":"10.1007/s10955-019-02434-w","month":"01","scopus_import":"1","language":[{"iso":"eng"}],"article_type":"original","volume":178,"date_published":"2020-01-01T00:00:00Z","ec_funded":1,"file_date_updated":"2020-07-14T12:47:28Z","has_accepted_license":"1","project":[{"name":"IST Austria Open Access Fund","_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854"},{"grant_number":"716117","_id":"256E75B8-B435-11E9-9278-68D0E5697425","name":"Optimal Transport and Stochastic Dynamics","call_identifier":"H2020"},{"call_identifier":"FWF","name":"Taming Complexity in Partial Differential Systems","grant_number":"F06504","_id":"260482E2-B435-11E9-9278-68D0E5697425"}],"corr_author":"1","intvolume":"       178","publication_status":"published","pmid":1,"date_created":"2019-04-30T07:34:18Z","day":"01","issue":"2","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"6358","article_processing_charge":"Yes (via OA deal)","isi":1,"ddc":["500"],"quality_controlled":"1","external_id":{"pmid":["33223567"],"isi":["000498933300001"],"arxiv":["1811.04572"]},"publication":"Journal of Statistical Physics","status":"public","file":[{"date_updated":"2020-07-14T12:47:28Z","content_type":"application/pdf","access_level":"open_access","relation":"main_file","file_id":"7209","creator":"dernst","checksum":"7b04befbdc0d4982c0ee945d25d19872","date_created":"2019-12-23T12:03:09Z","file_size":905538,"file_name":"2019_JourStatistPhysics_Carlen.pdf"}],"oa":1,"publisher":"Springer Nature","department":[{"_id":"JaMa"}],"page":"319-378"},{"intvolume":"        25","publication_status":"published","day":"16","date_created":"2019-04-30T07:40:17Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","_id":"6359","isi":1,"ddc":["510"],"external_id":{"isi":["000550150700001"],"arxiv":["1812.04583"]},"quality_controlled":"1","publication":"Electronic Journal of Probability","status":"public","file":[{"success":1,"file_name":"2020_EJournProbab_Dareiotis.pdf","file_size":273042,"date_created":"2020-09-21T13:15:02Z","checksum":"8e7c42e72596f6889d786e8e8b89994f","access_level":"open_access","date_updated":"2020-09-21T13:15:02Z","content_type":"application/pdf","creator":"dernst","relation":"main_file","file_id":"8549"}],"oa":1,"publisher":"Institute of Mathematical Statistics","department":[{"_id":"JaMa"}],"title":"On the regularisation of the noise for the Euler-Maruyama scheme with irregular drift","year":"2020","date_updated":"2023-10-16T09:22:50Z","publication_identifier":{"eissn":["1083-6489"]},"type":"journal_article","arxiv":1,"abstract":[{"text":"The strong rate of convergence of the Euler-Maruyama scheme for nondegenerate SDEs with irregular drift coefficients is considered. In the case of α-Hölder drift in the recent literature the rate α/2 was proved in many related situations. By exploiting the regularising effect of the noise more efficiently, we show that the rate is in fact arbitrarily close to 1/2 for all α>0. The result extends to Dini continuous coefficients, while in d=1 also to all bounded measurable coefficients.","lang":"eng"}],"article_number":"82","citation":{"apa":"Dareiotis, K., &#38; Gerencser, M. (2020). On the regularisation of the noise for the Euler-Maruyama scheme with irregular drift. <i>Electronic Journal of Probability</i>. Institute of Mathematical Statistics. <a href=\"https://doi.org/10.1214/20-EJP479\">https://doi.org/10.1214/20-EJP479</a>","ama":"Dareiotis K, Gerencser M. On the regularisation of the noise for the Euler-Maruyama scheme with irregular drift. <i>Electronic Journal of Probability</i>. 2020;25. doi:<a href=\"https://doi.org/10.1214/20-EJP479\">10.1214/20-EJP479</a>","ieee":"K. Dareiotis and M. Gerencser, “On the regularisation of the noise for the Euler-Maruyama scheme with irregular drift,” <i>Electronic Journal of Probability</i>, vol. 25. Institute of Mathematical Statistics, 2020.","mla":"Dareiotis, Konstantinos, and Mate Gerencser. “On the Regularisation of the Noise for the Euler-Maruyama Scheme with Irregular Drift.” <i>Electronic Journal of Probability</i>, vol. 25, 82, Institute of Mathematical Statistics, 2020, doi:<a href=\"https://doi.org/10.1214/20-EJP479\">10.1214/20-EJP479</a>.","chicago":"Dareiotis, Konstantinos, and Mate Gerencser. “On the Regularisation of the Noise for the Euler-Maruyama Scheme with Irregular Drift.” <i>Electronic Journal of Probability</i>. Institute of Mathematical Statistics, 2020. <a href=\"https://doi.org/10.1214/20-EJP479\">https://doi.org/10.1214/20-EJP479</a>.","ista":"Dareiotis K, Gerencser M. 2020. On the regularisation of the noise for the Euler-Maruyama scheme with irregular drift. Electronic Journal of Probability. 25, 82.","short":"K. Dareiotis, M. Gerencser, Electronic Journal of Probability 25 (2020)."},"oa_version":"Published Version","author":[{"first_name":"Konstantinos","last_name":"Dareiotis","full_name":"Dareiotis, Konstantinos"},{"last_name":"Gerencser","first_name":"Mate","id":"44ECEDF2-F248-11E8-B48F-1D18A9856A87","full_name":"Gerencser, Mate"}],"doi":"10.1214/20-EJP479","month":"07","scopus_import":"1","language":[{"iso":"eng"}],"article_type":"original","volume":25,"date_published":"2020-07-16T00:00:00Z","file_date_updated":"2020-09-21T13:15:02Z","has_accepted_license":"1"},{"month":"06","doi":"10.1126/science.aay8413","scopus_import":"1","article_type":"original","extern":"1","language":[{"iso":"eng"}],"date_published":"2020-06-12T00:00:00Z","volume":368,"year":"2020","title":"h/e oscillations in interlayer transport of delafossites","publication_identifier":{"eissn":["1095-9203"],"issn":["0036-8075"]},"arxiv":1,"type":"journal_article","date_updated":"2025-06-10T11:27:54Z","abstract":[{"lang":"eng","text":"Microstructures can be carefully designed to reveal the quantum phase of the wave-like nature of electrons in a metal. Here, we report phase-coherent oscillations of out-of-plane magnetoresistance in the layered delafossites PdCoO2 and PtCoO2. The oscillation period is equivalent to that determined by the magnetic flux quantum, h/e, threading an area defined by the atomic interlayer separation and the sample width, where h is Planck’s constant and e is the charge of an electron. The phase of the electron wave function appears robust over length scales exceeding 10 micrometers and persisting up to temperatures of T > 50 kelvin. We show that the experimental signal stems from a periodic field modulation of the out-of-plane hopping. These results demonstrate extraordinary single-particle quantum coherence lengths in delafossites."}],"citation":{"short":"C. Putzke, M.D. Bachmann, P. McGuinness, E. Zhakina, V. Sunko, M. Konczykowski, T. Oka, R. Moessner, A. Stern, M. König, S. Khim, A.P. Mackenzie, P.J.W. Moll, Science 368 (2020) 1234–1238.","chicago":"Putzke, Carsten, Maja D. Bachmann, Philippa McGuinness, Elina Zhakina, Veronika Sunko, Marcin Konczykowski, Takashi Oka, et al. “H/e Oscillations in Interlayer Transport of Delafossites.” <i>Science</i>. American Association for the Advancement of Science, 2020. <a href=\"https://doi.org/10.1126/science.aay8413\">https://doi.org/10.1126/science.aay8413</a>.","ista":"Putzke C, Bachmann MD, McGuinness P, Zhakina E, Sunko V, Konczykowski M, Oka T, Moessner R, Stern A, König M, Khim S, Mackenzie AP, Moll PJW. 2020. h/e oscillations in interlayer transport of delafossites. Science. 368(6496), 1234–1238.","mla":"Putzke, Carsten, et al. “H/e Oscillations in Interlayer Transport of Delafossites.” <i>Science</i>, vol. 368, no. 6496, American Association for the Advancement of Science, 2020, pp. 1234–38, doi:<a href=\"https://doi.org/10.1126/science.aay8413\">10.1126/science.aay8413</a>.","ieee":"C. Putzke <i>et al.</i>, “h/e oscillations in interlayer transport of delafossites,” <i>Science</i>, vol. 368, no. 6496. American Association for the Advancement of Science, pp. 1234–1238, 2020.","ama":"Putzke C, Bachmann MD, McGuinness P, et al. h/e oscillations in interlayer transport of delafossites. <i>Science</i>. 2020;368(6496):1234-1238. doi:<a href=\"https://doi.org/10.1126/science.aay8413\">10.1126/science.aay8413</a>","apa":"Putzke, C., Bachmann, M. D., McGuinness, P., Zhakina, E., Sunko, V., Konczykowski, M., … Moll, P. J. W. (2020). h/e oscillations in interlayer transport of delafossites. <i>Science</i>. American Association for the Advancement of Science. <a href=\"https://doi.org/10.1126/science.aay8413\">https://doi.org/10.1126/science.aay8413</a>"},"author":[{"full_name":"Putzke, Carsten","first_name":"Carsten","last_name":"Putzke"},{"full_name":"Bachmann, Maja D.","first_name":"Maja D.","last_name":"Bachmann"},{"full_name":"McGuinness, Philippa","last_name":"McGuinness","first_name":"Philippa"},{"last_name":"Zhakina","first_name":"Elina","full_name":"Zhakina, Elina"},{"last_name":"Sunko","orcid":"0000-0003-2724-3523","first_name":"Veronika","id":"23cb1cf6-2c7a-11ef-91a4-f72fc19f20b3","full_name":"Sunko, Veronika"},{"first_name":"Marcin","last_name":"Konczykowski","full_name":"Konczykowski, Marcin"},{"first_name":"Takashi","last_name":"Oka","full_name":"Oka, Takashi"},{"first_name":"Roderich","last_name":"Moessner","full_name":"Moessner, Roderich"},{"full_name":"Stern, Ady","first_name":"Ady","last_name":"Stern"},{"full_name":"König, Markus","first_name":"Markus","last_name":"König"},{"first_name":"Seunghyun","last_name":"Khim","full_name":"Khim, Seunghyun"},{"first_name":"Andrew P.","last_name":"Mackenzie","full_name":"Mackenzie, Andrew P."},{"first_name":"Philip J.W.","last_name":"Moll","full_name":"Moll, Philip J.W."}],"oa_version":"Preprint","article_processing_charge":"No","_id":"19807","OA_type":"green","external_id":{"arxiv":["1902.07331"],"pmid":["32527829"]},"quality_controlled":"1","OA_place":"repository","publication":"Science","status":"public","publisher":"American Association for the Advancement of Science","page":"1234-1238","oa":1,"publication_status":"published","intvolume":"       368","issue":"6496","pmid":1,"day":"12","date_created":"2025-06-10T09:11:34Z","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.1902.07331"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"}]