[{"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"12600","issue":"8","page":"6754-6772","day":"01","publication":"Water Resources Research","year":"2019","article_type":"original","date_created":"2023-02-20T08:12:59Z","language":[{"iso":"eng"}],"author":[{"last_name":"Girona‐Mata","first_name":"Marc","full_name":"Girona‐Mata, Marc"},{"full_name":"Miles, Evan S.","last_name":"Miles","first_name":"Evan S."},{"last_name":"Ragettli","first_name":"Silvan","full_name":"Ragettli, Silvan"},{"id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","full_name":"Pellicciotti, Francesca","last_name":"Pellicciotti","first_name":"Francesca"}],"intvolume":"        55","publication_status":"published","extern":"1","oa":1,"doi":"10.1029/2019wr024935","keyword":["Water Science and Technology"],"scopus_import":"1","citation":{"chicago":"Girona‐Mata, Marc, Evan S. Miles, Silvan Ragettli, and Francesca Pellicciotti. “High‐resolution Snowline Delineation from Landsat Imagery to Infer Snow Cover Controls in a Himalayan Catchment.” <i>Water Resources Research</i>. American Geophysical Union, 2019. <a href=\"https://doi.org/10.1029/2019wr024935\">https://doi.org/10.1029/2019wr024935</a>.","apa":"Girona‐Mata, M., Miles, E. S., Ragettli, S., &#38; Pellicciotti, F. (2019). High‐resolution snowline delineation from Landsat imagery to infer snow cover controls in a Himalayan catchment. <i>Water Resources Research</i>. American Geophysical Union. <a href=\"https://doi.org/10.1029/2019wr024935\">https://doi.org/10.1029/2019wr024935</a>","short":"M. Girona‐Mata, E.S. Miles, S. Ragettli, F. Pellicciotti, Water Resources Research 55 (2019) 6754–6772.","ista":"Girona‐Mata M, Miles ES, Ragettli S, Pellicciotti F. 2019. High‐resolution snowline delineation from Landsat imagery to infer snow cover controls in a Himalayan catchment. Water Resources Research. 55(8), 6754–6772.","mla":"Girona‐Mata, Marc, et al. “High‐resolution Snowline Delineation from Landsat Imagery to Infer Snow Cover Controls in a Himalayan Catchment.” <i>Water Resources Research</i>, vol. 55, no. 8, American Geophysical Union, 2019, pp. 6754–72, doi:<a href=\"https://doi.org/10.1029/2019wr024935\">10.1029/2019wr024935</a>.","ieee":"M. Girona‐Mata, E. S. Miles, S. Ragettli, and F. Pellicciotti, “High‐resolution snowline delineation from Landsat imagery to infer snow cover controls in a Himalayan catchment,” <i>Water Resources Research</i>, vol. 55, no. 8. American Geophysical Union, pp. 6754–6772, 2019.","ama":"Girona‐Mata M, Miles ES, Ragettli S, Pellicciotti F. High‐resolution snowline delineation from Landsat imagery to infer snow cover controls in a Himalayan catchment. <i>Water Resources Research</i>. 2019;55(8):6754-6772. doi:<a href=\"https://doi.org/10.1029/2019wr024935\">10.1029/2019wr024935</a>"},"abstract":[{"lang":"eng","text":"The snow cover dynamics of High Mountain Asia are usually assessed at spatial resolutions of 250 m or greater, but this scale is too coarse to clearly represent the rugged topography common to the region. Higher-resolution measurement of snow-covered area often results in biased sampling due to cloud cover and deep shadows. We therefore develop a Normalized Difference Snow Index-based workflow to delineate snow lines from Landsat Thematic Mapper/Enhanced Thematic Mapper+ imagery and apply it to the upper Langtang Valley in Nepal, processing 194 scenes spanning 1999 to 2013. For each scene, we determine the spatial distribution of snow line altitudes (SLAs) with respect to aspect and across six subcatchments. Our results show that the mean SLA exhibits distinct seasonal behavior based on aspect and subcatchment position. We find that SLA dynamics respond to spatial and seasonal trade-offs in precipitation, temperature, and solar radiation, which act as primary controls. We identify two SLA spatial gradients, which we attribute to the effect of spatially variable precipitation. Our results also reveal that aspect-related SLA differences vary seasonally and are influenced by solar radiation. In terms of seasonal dominant controls, we demonstrate that the snow line is controlled by snow precipitation in winter, melt in premonsoon, a combination of both in postmonsoon, and temperature in monsoon, explaining to a large extent the spatial and seasonal variability of the SLA in the upper Langtang Valley. We conclude that while SLA and snow-covered area are complementary metrics, the SLA has a strong potential for understanding local-scale snow cover dynamics and their controlling mechanisms."}],"oa_version":"Published Version","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1029/2019WR024935"}],"publisher":"American Geophysical Union","status":"public","type":"journal_article","publication_identifier":{"issn":["0043-1397"],"eissn":["1944-7973"]},"volume":55,"date_published":"2019-08-01T00:00:00Z","article_processing_charge":"No","title":"High‐resolution snowline delineation from Landsat imagery to infer snow cover controls in a Himalayan catchment","quality_controlled":"1","date_updated":"2023-02-28T12:14:18Z","month":"08"},{"volume":65,"title":"Supraglacial ice cliffs and ponds on debris-covered glaciers: Spatio-temporal distribution and characteristics","date_published":"2019-08-01T00:00:00Z","article_processing_charge":"No","quality_controlled":"1","date_updated":"2023-02-28T12:11:07Z","month":"08","oa_version":"Published Version","abstract":[{"text":"Ice cliffs and ponds on debris-covered glaciers have received increased attention due to their role in amplifying local melt. However, very few studies have looked at these features on the catchment scale to determine their patterns and changes in space and time. We have compiled a detailed inventory of cliffs and ponds in the Langtang catchment, central Himalaya, from six high-resolution satellite orthoimages and DEMs between 2006 and 2015, and a historic orthophoto from 1974. Cliffs cover between 1.4% (± 0.4%) in the dry and 3.4% (± 0.9%) in the wet seasons and ponds between 0.6% (± 0.1%) and 1.6% (± 0.3%) of the total debris-covered tongues. We find large variations between seasons, as cliffs and ponds tend to grow in the wetter monsoon period, but there is no obvious trend in total area over the study period. The inventory further shows that cliffs are predominately north-facing irrespective of the glacier flow direction. Both cliffs and ponds appear in higher densities several hundred metres from the terminus in areas where tributaries reach the main glacier tongue. On the largest glacier in the catchment ~10% of all cliffs and ponds persisted over nearly a decade.","lang":"eng"}],"citation":{"chicago":"STEINER, JAKOB F., PASCAL BURI, EVAN S. MILES, SILVAN RAGETTLI, and Francesca Pellicciotti. “Supraglacial Ice Cliffs and Ponds on Debris-Covered Glaciers: Spatio-Temporal Distribution and Characteristics.” <i>Journal of Glaciology</i>. Cambridge University Press, 2019. <a href=\"https://doi.org/10.1017/jog.2019.40\">https://doi.org/10.1017/jog.2019.40</a>.","apa":"STEINER, J. F., BURI, P., MILES, E. S., RAGETTLI, S., &#38; Pellicciotti, F. (2019). Supraglacial ice cliffs and ponds on debris-covered glaciers: Spatio-temporal distribution and characteristics. <i>Journal of Glaciology</i>. Cambridge University Press. <a href=\"https://doi.org/10.1017/jog.2019.40\">https://doi.org/10.1017/jog.2019.40</a>","ista":"STEINER JF, BURI P, MILES ES, RAGETTLI S, Pellicciotti F. 2019. Supraglacial ice cliffs and ponds on debris-covered glaciers: Spatio-temporal distribution and characteristics. Journal of Glaciology. 65(252), 617–632.","short":"J.F. STEINER, P. BURI, E.S. MILES, S. RAGETTLI, F. Pellicciotti, Journal of Glaciology 65 (2019) 617–632.","mla":"STEINER, JAKOB F., et al. “Supraglacial Ice Cliffs and Ponds on Debris-Covered Glaciers: Spatio-Temporal Distribution and Characteristics.” <i>Journal of Glaciology</i>, vol. 65, no. 252, Cambridge University Press, 2019, pp. 617–32, doi:<a href=\"https://doi.org/10.1017/jog.2019.40\">10.1017/jog.2019.40</a>.","ieee":"J. F. STEINER, P. BURI, E. S. MILES, S. RAGETTLI, and F. Pellicciotti, “Supraglacial ice cliffs and ponds on debris-covered glaciers: Spatio-temporal distribution and characteristics,” <i>Journal of Glaciology</i>, vol. 65, no. 252. Cambridge University Press, pp. 617–632, 2019.","ama":"STEINER JF, BURI P, MILES ES, RAGETTLI S, Pellicciotti F. Supraglacial ice cliffs and ponds on debris-covered glaciers: Spatio-temporal distribution and characteristics. <i>Journal of Glaciology</i>. 2019;65(252):617-632. doi:<a href=\"https://doi.org/10.1017/jog.2019.40\">10.1017/jog.2019.40</a>"},"scopus_import":"1","publisher":"Cambridge University Press","main_file_link":[{"url":"https://doi.org/10.1017/jog.2019.40","open_access":"1"}],"publication_identifier":{"issn":["0022-1430"],"eissn":["1727-5652"]},"type":"journal_article","status":"public","year":"2019","date_created":"2023-02-20T08:13:03Z","article_type":"original","author":[{"first_name":"JAKOB F.","last_name":"STEINER","full_name":"STEINER, JAKOB F."},{"last_name":"BURI","first_name":"PASCAL","full_name":"BURI, PASCAL"},{"full_name":"MILES, EVAN S.","first_name":"EVAN S.","last_name":"MILES"},{"first_name":"SILVAN","last_name":"RAGETTLI","full_name":"RAGETTLI, SILVAN"},{"first_name":"Francesca","last_name":"Pellicciotti","id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","full_name":"Pellicciotti, Francesca"}],"language":[{"iso":"eng"}],"doi":"10.1017/jog.2019.40","extern":"1","oa":1,"publication_status":"published","intvolume":"        65","issue":"252","_id":"12601","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","page":"617-632","day":"01","publication":"Journal of Glaciology"},{"doi":"10.3389/feart.2019.00143","extern":"1","publication_status":"published","oa":1,"intvolume":"         7","author":[{"first_name":"René R.","last_name":"Wijngaard","full_name":"Wijngaard, René R."},{"first_name":"Jakob F.","last_name":"Steiner","full_name":"Steiner, Jakob F."},{"full_name":"Kraaijenbrink, Philip D. A.","first_name":"Philip D. A.","last_name":"Kraaijenbrink"},{"last_name":"Klug","first_name":"Christoph","full_name":"Klug, Christoph"},{"last_name":"Adhikari","first_name":"Surendra","full_name":"Adhikari, Surendra"},{"first_name":"Argha","last_name":"Banerjee","full_name":"Banerjee, Argha"},{"full_name":"Pellicciotti, Francesca","id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","first_name":"Francesca","last_name":"Pellicciotti"},{"full_name":"van Beek, Ludovicus P. H.","last_name":"van Beek","first_name":"Ludovicus P. H."},{"full_name":"Bierkens, Marc F. P.","last_name":"Bierkens","first_name":"Marc F. P."},{"first_name":"Arthur F.","last_name":"Lutz","full_name":"Lutz, Arthur F."},{"full_name":"Immerzeel, Walter W.","last_name":"Immerzeel","first_name":"Walter W."}],"language":[{"iso":"eng"}],"date_created":"2023-02-20T08:13:08Z","article_type":"original","year":"2019","publication":"Frontiers in Earth Science","day":"04","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"12602","month":"06","quality_controlled":"1","date_updated":"2023-02-28T12:04:48Z","title":"Modeling the response of the Langtang Glacier and the Hintereisferner to a changing climate since the Little Ice Age","date_published":"2019-06-04T00:00:00Z","article_processing_charge":"No","volume":7,"publication_identifier":{"issn":["2296-6463"]},"type":"journal_article","status":"public","publisher":"Frontiers Media","main_file_link":[{"url":"https://doi.org/10.3389/feart.2019.00143","open_access":"1"}],"oa_version":"Published Version","abstract":[{"text":"This study aims at developing and applying a spatially-distributed coupled glacier mass balance and ice-flow model to attribute the response of glaciers to natural and anthropogenic climate change. We focus on two glaciers with contrasting surface characteristics: a debris-covered glacier (Langtang Glacier in Nepal) and a clean-ice glacier (Hintereisferner in Austria). The model is applied from the end of the Little Ice Age (1850) to the present-day (2016) and is forced with four bias-corrected General Circulation Models (GCMs) from the historical experiment of the CMIP5 archive. The selected GCMs represent region-specific warm-dry, warm-wet, cold-dry, and cold-wet climate conditions. To isolate the effects of anthropogenic climate change on glacier mass balance and flow runs from these GCMs with and without further anthropogenic forcing after 1970 until 2016 are selected. The outcomes indicate that both glaciers experience the largest reduction in area and volume under warm climate conditions, whereas area and volume reductions are smaller under cold climate conditions. Simultaneously with changes in glacier area and volume, surface velocities generally decrease over time. Without further anthropogenic forcing the results reveal a 3% (9%) smaller decline in glacier area (volume) for the debris-covered glacier and a 18% (39%) smaller decline in glacier area (volume) for the clean-ice glacier. The difference in the magnitude between the two glaciers can mainly be attributed to differences in the response time of the glaciers, where the clean-ice glacier shows a much faster response to climate change. We conclude that the response of the two glaciers can mainly be attributed to anthropogenic climate change and that the impact is larger on the clean-ice glacier. The outcomes show that the model performs well under different climate conditions and that the developed approach can be used for regional-scale glacio-hydrological modeling.","lang":"eng"}],"citation":{"ama":"Wijngaard RR, Steiner JF, Kraaijenbrink PDA, et al. Modeling the response of the Langtang Glacier and the Hintereisferner to a changing climate since the Little Ice Age. <i>Frontiers in Earth Science</i>. 2019;7. doi:<a href=\"https://doi.org/10.3389/feart.2019.00143\">10.3389/feart.2019.00143</a>","ieee":"R. R. Wijngaard <i>et al.</i>, “Modeling the response of the Langtang Glacier and the Hintereisferner to a changing climate since the Little Ice Age,” <i>Frontiers in Earth Science</i>, vol. 7. Frontiers Media, 2019.","mla":"Wijngaard, René R., et al. “Modeling the Response of the Langtang Glacier and the Hintereisferner to a Changing Climate since the Little Ice Age.” <i>Frontiers in Earth Science</i>, vol. 7, 143, Frontiers Media, 2019, doi:<a href=\"https://doi.org/10.3389/feart.2019.00143\">10.3389/feart.2019.00143</a>.","short":"R.R. Wijngaard, J.F. Steiner, P.D.A. Kraaijenbrink, C. Klug, S. Adhikari, A. Banerjee, F. Pellicciotti, L.P.H. van Beek, M.F.P. Bierkens, A.F. Lutz, W.W. Immerzeel, Frontiers in Earth Science 7 (2019).","ista":"Wijngaard RR, Steiner JF, Kraaijenbrink PDA, Klug C, Adhikari S, Banerjee A, Pellicciotti F, van Beek LPH, Bierkens MFP, Lutz AF, Immerzeel WW. 2019. Modeling the response of the Langtang Glacier and the Hintereisferner to a changing climate since the Little Ice Age. Frontiers in Earth Science. 7, 143.","apa":"Wijngaard, R. R., Steiner, J. F., Kraaijenbrink, P. D. A., Klug, C., Adhikari, S., Banerjee, A., … Immerzeel, W. W. (2019). Modeling the response of the Langtang Glacier and the Hintereisferner to a changing climate since the Little Ice Age. <i>Frontiers in Earth Science</i>. Frontiers Media. <a href=\"https://doi.org/10.3389/feart.2019.00143\">https://doi.org/10.3389/feart.2019.00143</a>","chicago":"Wijngaard, René R., Jakob F. Steiner, Philip D. A. Kraaijenbrink, Christoph Klug, Surendra Adhikari, Argha Banerjee, Francesca Pellicciotti, et al. “Modeling the Response of the Langtang Glacier and the Hintereisferner to a Changing Climate since the Little Ice Age.” <i>Frontiers in Earth Science</i>. Frontiers Media, 2019. <a href=\"https://doi.org/10.3389/feart.2019.00143\">https://doi.org/10.3389/feart.2019.00143</a>."},"article_number":"143","scopus_import":"1"},{"has_accepted_license":"1","main_file_link":[{"url":"https://vsc.ac.at/fileadmin/user_upload/vsc/conferences/ahpc19/BOOKLET_AHPC19.pdf","open_access":"1"}],"publisher":"Institut für Mathematik und wissenschaftliches Rechnen der Universität Graz","page":"25","oa_version":"Published Version","citation":{"apa":"Schlögl, A., Kiss, J., &#38; Elefante, S. (2019). Is Debian suitable for running an HPC Cluster? In <i>AHPC19 - Austrian HPC Meeting 2019 </i> (p. 25). Grundlsee, Austria: Institut für Mathematik und wissenschaftliches Rechnen der Universität Graz.","chicago":"Schlögl, Alois, Janos Kiss, and Stefano Elefante. “Is Debian Suitable for Running an HPC Cluster?” In <i>AHPC19 - Austrian HPC Meeting 2019 </i>, 25. Institut für Mathematik und wissenschaftliches Rechnen der Universität Graz, 2019.","mla":"Schlögl, Alois, et al. “Is Debian Suitable for Running an HPC Cluster?” <i>AHPC19 - Austrian HPC Meeting 2019 </i>, Institut für Mathematik und wissenschaftliches Rechnen der Universität Graz, 2019, p. 25.","ista":"Schlögl A, Kiss J, Elefante S. 2019. Is Debian suitable for running an HPC Cluster? AHPC19 - Austrian HPC Meeting 2019 . AHPC: Austrian HPC Meeting, 25.","short":"A. Schlögl, J. Kiss, S. Elefante, in:, AHPC19 - Austrian HPC Meeting 2019 , Institut für Mathematik und wissenschaftliches Rechnen der Universität Graz, 2019, p. 25.","ieee":"A. Schlögl, J. Kiss, and S. Elefante, “Is Debian suitable for running an HPC Cluster?,” in <i>AHPC19 - Austrian HPC Meeting 2019 </i>, Grundlsee, Austria, 2019, p. 25.","ama":"Schlögl A, Kiss J, Elefante S. Is Debian suitable for running an HPC Cluster? In: <i>AHPC19 - Austrian HPC Meeting 2019 </i>. Institut für Mathematik und wissenschaftliches Rechnen der Universität Graz; 2019:25."},"conference":{"name":"AHPC: Austrian HPC Meeting","end_date":"2019-02-27","start_date":"2019-02-25","location":"Grundlsee, Austria"},"department":[{"_id":"ScienComp"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"12901","status":"public","publication":"AHPC19 - Austrian HPC Meeting 2019 ","corr_author":"1","type":"conference_abstract","day":"27","date_published":"2019-02-27T00:00:00Z","article_processing_charge":"No","date_created":"2023-05-05T12:48:48Z","title":"Is Debian suitable for running an HPC Cluster?","year":"2019","file":[{"date_created":"2023-05-16T07:27:09Z","success":1,"file_id":"12970","checksum":"acc8272027faaf30709c51ac5c58ffa4","creator":"dernst","file_name":"2019_AHPC_Schloegl.pdf","access_level":"open_access","file_size":1097603,"content_type":"application/pdf","date_updated":"2023-05-16T07:27:09Z","relation":"main_file"}],"month":"02","oa":1,"publication_status":"published","date_updated":"2024-10-09T21:05:24Z","author":[{"id":"45BF87EE-F248-11E8-B48F-1D18A9856A87","full_name":"Schlögl, Alois","last_name":"Schlögl","first_name":"Alois","orcid":"0000-0002-5621-8100"},{"full_name":"Kiss, Janos","id":"3D3A06F8-F248-11E8-B48F-1D18A9856A87","last_name":"Kiss","first_name":"Janos"},{"last_name":"Elefante","first_name":"Stefano","id":"490F40CE-F248-11E8-B48F-1D18A9856A87","full_name":"Elefante, Stefano"}],"language":[{"iso":"eng"}],"ddc":["000"],"file_date_updated":"2023-05-16T07:27:09Z"},{"oa":1,"month":"12","doi":"10.5061/DRYAD.TB2RBNZWK","license":"https://creativecommons.org/publicdomain/zero/1.0/","ddc":["570"],"author":[{"last_name":"Johannesson","first_name":"Kerstin","full_name":"Johannesson, Kerstin"},{"first_name":"Zuzanna","last_name":"Zagrodzka","full_name":"Zagrodzka, Zuzanna"},{"full_name":"Faria, Rui","first_name":"Rui","last_name":"Faria"},{"orcid":"0000-0003-1050-4969","last_name":"Westram","first_name":"Anja M","full_name":"Westram, Anja M","id":"3C147470-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Butlin","first_name":"Roger","full_name":"Butlin, Roger"}],"date_updated":"2025-07-10T11:54:22Z","article_processing_charge":"No","date_published":"2019-12-02T00:00:00Z","title":"Data from: Is embryo abortion a postzygotic barrier to gene flow between Littorina ecotypes?","date_created":"2023-05-23T16:36:27Z","year":"2019","status":"public","type":"research_data_reference","day":"02","related_material":{"record":[{"status":"public","relation":"used_in_publication","id":"7205"}]},"tmp":{"image":"/images/cc_0.png","legal_code_url":"https://creativecommons.org/publicdomain/zero/1.0/legalcode","name":"Creative Commons Public Domain Dedication (CC0 1.0)","short":"CC0 (1.0)"},"main_file_link":[{"open_access":"1","url":"https://doi.org/10.5061/dryad.tb2rbnzwk"}],"publisher":"Dryad","abstract":[{"text":"Genetic incompatibilities contribute to reproductive isolation between many diverging populations, but it is still unclear to what extent they play a role if divergence happens with gene flow. In contact zones between the \"Crab\" and \"Wave\" ecotypes of the snail Littorina saxatilis divergent selection forms strong barriers to gene flow, while the role of postzygotic barriers due to selection against hybrids remains unclear. High embryo abortion rates in this species could indicate the presence of such barriers. Postzygotic barriers might include genetic incompatibilities (e.g. Dobzhansky-Muller incompatibilities) but also maladaptation, both expected to be most pronounced in contact zones. In addition, embryo abortion might reflect physiological stress on females and embryos independent of any genetic stress. We examined all embryos of &gt;500 females sampled outside and inside contact zones of three populations in Sweden. Females' clutch size ranged from 0 to 1011 embryos (mean 130±123) and abortion rates varied between 0 and100% (mean 12%). We described female genotypes by using a hybrid index based on hundreds of SNPs differentiated between ecotypes with which we characterised female genotypes. We also calculated female SNP heterozygosity and inversion karyotype. Clutch size did not vary with female hybrid index and abortion rates were only weakly related to hybrid index in two sites but not at all in a third site. No additional variation in abortion rate was explained by female SNP heterozygosity, but increased female inversion heterozygosity added slightly to increased abortion. Our results show only weak and probably biologically insignificant postzygotic barriers contributing to ecotype divergence and the high and variable abortion rates were marginally, if at all, explained by hybrid index of females.","lang":"eng"}],"citation":{"ista":"Johannesson K, Zagrodzka Z, Faria R, Westram AM, Butlin R. 2019. Data from: Is embryo abortion a postzygotic barrier to gene flow between Littorina ecotypes?, Dryad, <a href=\"https://doi.org/10.5061/DRYAD.TB2RBNZWK\">10.5061/DRYAD.TB2RBNZWK</a>.","short":"K. Johannesson, Z. Zagrodzka, R. Faria, A.M. Westram, R. Butlin, (2019).","mla":"Johannesson, Kerstin, et al. <i>Data from: Is Embryo Abortion a Postzygotic Barrier to Gene Flow between Littorina Ecotypes?</i> Dryad, 2019, doi:<a href=\"https://doi.org/10.5061/DRYAD.TB2RBNZWK\">10.5061/DRYAD.TB2RBNZWK</a>.","chicago":"Johannesson, Kerstin, Zuzanna Zagrodzka, Rui Faria, Anja M Westram, and Roger Butlin. “Data from: Is Embryo Abortion a Postzygotic Barrier to Gene Flow between Littorina Ecotypes?” Dryad, 2019. <a href=\"https://doi.org/10.5061/DRYAD.TB2RBNZWK\">https://doi.org/10.5061/DRYAD.TB2RBNZWK</a>.","apa":"Johannesson, K., Zagrodzka, Z., Faria, R., Westram, A. M., &#38; Butlin, R. (2019). Data from: Is embryo abortion a postzygotic barrier to gene flow between Littorina ecotypes? Dryad. <a href=\"https://doi.org/10.5061/DRYAD.TB2RBNZWK\">https://doi.org/10.5061/DRYAD.TB2RBNZWK</a>","ama":"Johannesson K, Zagrodzka Z, Faria R, Westram AM, Butlin R. Data from: Is embryo abortion a postzygotic barrier to gene flow between Littorina ecotypes? 2019. doi:<a href=\"https://doi.org/10.5061/DRYAD.TB2RBNZWK\">10.5061/DRYAD.TB2RBNZWK</a>","ieee":"K. Johannesson, Z. Zagrodzka, R. Faria, A. M. Westram, and R. Butlin, “Data from: Is embryo abortion a postzygotic barrier to gene flow between Littorina ecotypes?” Dryad, 2019."},"oa_version":"Published Version","_id":"13067","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","department":[{"_id":"NiBa"}]},{"date_published":"2019-10-28T00:00:00Z","article_processing_charge":"No","title":"Data from: Selective clearance of the inner nuclear membrane protein emerin by vesicular transport during ER stress","date_created":"2023-05-23T17:09:30Z","year":"2019","extern":"1","oa":1,"doi":"10.5061/DRYAD.N0R525H","month":"10","ddc":["570"],"author":[{"full_name":"Buchwalter, Abigail","first_name":"Abigail","last_name":"Buchwalter"},{"full_name":"Schulte, Roberta","first_name":"Roberta","last_name":"Schulte"},{"last_name":"Tsai","first_name":"Hsiao","full_name":"Tsai, Hsiao"},{"last_name":"Capitanio","first_name":"Juliana","full_name":"Capitanio, Juliana"},{"id":"86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed","full_name":"HETZER, Martin W","last_name":"HETZER","first_name":"Martin W","orcid":"0000-0002-2111-992X"}],"date_updated":"2024-10-14T12:08:37Z","main_file_link":[{"url":"https://doi.org/10.5061/dryad.n0r525h","open_access":"1"}],"tmp":{"image":"/images/cc_0.png","legal_code_url":"https://creativecommons.org/publicdomain/zero/1.0/legalcode","name":"Creative Commons Public Domain Dedication (CC0 1.0)","short":"CC0 (1.0)"},"publisher":"Dryad","citation":{"ieee":"A. Buchwalter, R. Schulte, H. Tsai, J. Capitanio, and M. Hetzer, “Data from: Selective clearance of the inner nuclear membrane protein emerin by vesicular transport during ER stress.” Dryad, 2019.","ama":"Buchwalter A, Schulte R, Tsai H, Capitanio J, Hetzer M. Data from: Selective clearance of the inner nuclear membrane protein emerin by vesicular transport during ER stress. 2019. doi:<a href=\"https://doi.org/10.5061/DRYAD.N0R525H\">10.5061/DRYAD.N0R525H</a>","chicago":"Buchwalter, Abigail, Roberta Schulte, Hsiao Tsai, Juliana Capitanio, and Martin Hetzer. “Data from: Selective Clearance of the Inner Nuclear Membrane Protein Emerin by Vesicular Transport during ER Stress.” Dryad, 2019. <a href=\"https://doi.org/10.5061/DRYAD.N0R525H\">https://doi.org/10.5061/DRYAD.N0R525H</a>.","apa":"Buchwalter, A., Schulte, R., Tsai, H., Capitanio, J., &#38; Hetzer, M. (2019). Data from: Selective clearance of the inner nuclear membrane protein emerin by vesicular transport during ER stress. Dryad. <a href=\"https://doi.org/10.5061/DRYAD.N0R525H\">https://doi.org/10.5061/DRYAD.N0R525H</a>","short":"A. Buchwalter, R. Schulte, H. Tsai, J. Capitanio, M. Hetzer, (2019).","ista":"Buchwalter A, Schulte R, Tsai H, Capitanio J, Hetzer M. 2019. Data from: Selective clearance of the inner nuclear membrane protein emerin by vesicular transport during ER stress, Dryad, <a href=\"https://doi.org/10.5061/DRYAD.N0R525H\">10.5061/DRYAD.N0R525H</a>.","mla":"Buchwalter, Abigail, et al. <i>Data from: Selective Clearance of the Inner Nuclear Membrane Protein Emerin by Vesicular Transport during ER Stress</i>. Dryad, 2019, doi:<a href=\"https://doi.org/10.5061/DRYAD.N0R525H\">10.5061/DRYAD.N0R525H</a>."},"abstract":[{"text":"The inner nuclear membrane (INM) is a subdomain of the endoplasmic reticulum (ER) that is gated by the nuclear pore complex. It is unknown whether proteins of the INM and ER are degraded through shared or distinct pathways in mammalian cells. We applied dynamic proteomics to profile protein half-lives and report that INM and ER residents turn over at similar rates, indicating that the INM’s unique topology is not a barrier to turnover. Using a microscopy approach, we observed that the proteasome can degrade INM proteins in situ. However, we also uncovered evidence for selective, vesicular transport-mediated turnover of a single INM protein, emerin, that is potentiated by ER stress. Emerin is rapidly cleared from the INM by a mechanism that requires emerin’s LEM domain to mediate vesicular trafficking to lysosomes. This work demonstrates that the INM can be dynamically remodeled in response to environmental inputs.","lang":"eng"}],"oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"13079","status":"public","type":"research_data_reference","day":"28","related_material":{"record":[{"status":"public","id":"11060","relation":"used_in_publication"}]}},{"DOAJ_listed":"1","year":"2019","article_type":"original","date_created":"2026-01-29T21:17:15Z","author":[{"first_name":"Valentina","last_name":"Corvaglia","full_name":"Corvaglia, Valentina"},{"last_name":"Carbajo","first_name":"Daniel","full_name":"Carbajo, Daniel"},{"last_name":"Prabhakaran","first_name":"Panchami","full_name":"Prabhakaran, Panchami"},{"full_name":"Ziach, Krzysztof","last_name":"Ziach","first_name":"Krzysztof"},{"orcid":"0000-0001-5996-956X","first_name":"Pradeep K","last_name":"Mandal","full_name":"Mandal, Pradeep K","id":"6a3def15-d4b4-11ef-9fa9-a24c1f545ec3"},{"full_name":"Santos, Victor Dos","last_name":"Santos","first_name":"Victor Dos"},{"full_name":"Legeay, Carole","first_name":"Carole","last_name":"Legeay"},{"last_name":"Vogel","first_name":"Rachel","full_name":"Vogel, Rachel"},{"last_name":"Parissi","first_name":"Vincent","full_name":"Parissi, Vincent"},{"last_name":"Pourquier","first_name":"Philippe","full_name":"Pourquier, Philippe"},{"first_name":"Ivan","last_name":"Huc","full_name":"Huc, Ivan"}],"language":[{"iso":"eng"}],"intvolume":"        47","doi":"10.1093/nar/gkz352","extern":"1","oa":1,"publication_status":"published","issue":"11","_id":"21095","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)","image":"/images/cc_by_nc.png","legal_code_url":"https://creativecommons.org/licenses/by-nc/4.0/legalcode","short":"CC BY-NC (4.0)"},"page":"5511-5521","day":"20","publication":"Nucleic Acids Research","OA_place":"publisher","volume":47,"article_processing_charge":"No","date_published":"2019-06-20T00:00:00Z","title":"Carboxylate-functionalized foldamer inhibitors of HIV-1 integrase and Topoisomerase 1: Artificial analogues of DNA mimic proteins","date_updated":"2026-02-23T09:56:28Z","quality_controlled":"1","month":"06","oa_version":"Published Version","abstract":[{"text":"Inspired by DNA mimic proteins, we have introduced aromatic foldamers bearing phosphonate groups as synthetic mimics of the charge surface of B-DNA and competitive inhibitors of some therapeutically relevant DNA-binding enzymes: the human DNA Topoisomerase 1 (Top1) and the human HIV-1 integrase (HIV-1 IN). We now report on variants of these anionic foldamers bearing carboxylates instead of phosphonates. Several new monomers have been synthesized with protecting groups suitable for solid phase synthesis (SPS). Six hexadecaamides have been prepared using SPS. Proof of their resemblance to B-DNA was brought by the first crystal structure of one of these DNA-mimic foldamers in its polyanionic form. While some of the foldamers were found to be as active as, or even more active than, the original phosphonate oligomers, others had no activity at all or could even stimulate enzyme activity in vitro. Some foldamers were found to have differential inhibitory effects on the two enzymes. These results demonstrate a strong dependence of inhibitory activity on foldamer structure and charge distribution. They open broad avenues for the development of new classes of derivatives that could inhibit the interaction of specific proteins with their DNA target thereby influencing the cellular pathways in which they are involved.","lang":"eng"}],"citation":{"ieee":"V. Corvaglia <i>et al.</i>, “Carboxylate-functionalized foldamer inhibitors of HIV-1 integrase and Topoisomerase 1: Artificial analogues of DNA mimic proteins,” <i>Nucleic Acids Research</i>, vol. 47, no. 11. Oxford University Press, pp. 5511–5521, 2019.","ama":"Corvaglia V, Carbajo D, Prabhakaran P, et al. Carboxylate-functionalized foldamer inhibitors of HIV-1 integrase and Topoisomerase 1: Artificial analogues of DNA mimic proteins. <i>Nucleic Acids Research</i>. 2019;47(11):5511-5521. doi:<a href=\"https://doi.org/10.1093/nar/gkz352\">10.1093/nar/gkz352</a>","apa":"Corvaglia, V., Carbajo, D., Prabhakaran, P., Ziach, K., Mandal, P. K., Santos, V. D., … Huc, I. (2019). Carboxylate-functionalized foldamer inhibitors of HIV-1 integrase and Topoisomerase 1: Artificial analogues of DNA mimic proteins. <i>Nucleic Acids Research</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/nar/gkz352\">https://doi.org/10.1093/nar/gkz352</a>","chicago":"Corvaglia, Valentina, Daniel Carbajo, Panchami Prabhakaran, Krzysztof Ziach, Pradeep K Mandal, Victor Dos Santos, Carole Legeay, et al. “Carboxylate-Functionalized Foldamer Inhibitors of HIV-1 Integrase and Topoisomerase 1: Artificial Analogues of DNA Mimic Proteins.” <i>Nucleic Acids Research</i>. Oxford University Press, 2019. <a href=\"https://doi.org/10.1093/nar/gkz352\">https://doi.org/10.1093/nar/gkz352</a>.","mla":"Corvaglia, Valentina, et al. “Carboxylate-Functionalized Foldamer Inhibitors of HIV-1 Integrase and Topoisomerase 1: Artificial Analogues of DNA Mimic Proteins.” <i>Nucleic Acids Research</i>, vol. 47, no. 11, Oxford University Press, 2019, pp. 5511–21, doi:<a href=\"https://doi.org/10.1093/nar/gkz352\">10.1093/nar/gkz352</a>.","ista":"Corvaglia V, Carbajo D, Prabhakaran P, Ziach K, Mandal PK, Santos VD, Legeay C, Vogel R, Parissi V, Pourquier P, Huc I. 2019. Carboxylate-functionalized foldamer inhibitors of HIV-1 integrase and Topoisomerase 1: Artificial analogues of DNA mimic proteins. Nucleic Acids Research. 47(11), 5511–5521.","short":"V. Corvaglia, D. Carbajo, P. Prabhakaran, K. Ziach, P.K. Mandal, V.D. Santos, C. Legeay, R. Vogel, V. Parissi, P. Pourquier, I. Huc, Nucleic Acids Research 47 (2019) 5511–5521."},"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1093/nar/gkz352"}],"publisher":"Oxford University Press","OA_type":"gold","status":"public","publication_identifier":{"eissn":["1362-4962"],"issn":["0305-1048"]},"type":"journal_article"},{"quality_controlled":"1","date_updated":"2026-04-15T06:58:28Z","month":"07","volume":10,"title":"Towards integrated tunable all-silicon free-electron light sources","date_published":"2019-07-18T00:00:00Z","article_processing_charge":"No","OA_type":"gold","publication_identifier":{"eissn":["2041-1723"]},"type":"journal_article","status":"public","oa_version":"Published Version","citation":{"ama":"Roques-Carmes C, Kooi SE, Yang Y, et al. Towards integrated tunable all-silicon free-electron light sources. <i>Nature Communications</i>. 2019;10. doi:<a href=\"https://doi.org/10.1038/s41467-019-11070-7\">10.1038/s41467-019-11070-7</a>","ieee":"C. Roques-Carmes <i>et al.</i>, “Towards integrated tunable all-silicon free-electron light sources,” <i>Nature Communications</i>, vol. 10. Springer Nature, 2019.","short":"C. Roques-Carmes, S.E. Kooi, Y. Yang, A. Massuda, P.D. Keathley, A. Zaidi, Y. Yang, J.D. Joannopoulos, K.K. Berggren, I. Kaminer, M. Soljačić, Nature Communications 10 (2019).","ista":"Roques-Carmes C, Kooi SE, Yang Y, Massuda A, Keathley PD, Zaidi A, Yang Y, Joannopoulos JD, Berggren KK, Kaminer I, Soljačić M. 2019. Towards integrated tunable all-silicon free-electron light sources. Nature Communications. 10, 3176.","mla":"Roques-Carmes, Charles, et al. “Towards Integrated Tunable All-Silicon Free-Electron Light Sources.” <i>Nature Communications</i>, vol. 10, 3176, Springer Nature, 2019, doi:<a href=\"https://doi.org/10.1038/s41467-019-11070-7\">10.1038/s41467-019-11070-7</a>.","chicago":"Roques-Carmes, Charles, Steven E. Kooi, Yi Yang, Aviram Massuda, Phillip D. Keathley, Aun Zaidi, Yujia Yang, et al. “Towards Integrated Tunable All-Silicon Free-Electron Light Sources.” <i>Nature Communications</i>. Springer Nature, 2019. <a href=\"https://doi.org/10.1038/s41467-019-11070-7\">https://doi.org/10.1038/s41467-019-11070-7</a>.","apa":"Roques-Carmes, C., Kooi, S. E., Yang, Y., Massuda, A., Keathley, P. D., Zaidi, A., … Soljačić, M. (2019). Towards integrated tunable all-silicon free-electron light sources. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-019-11070-7\">https://doi.org/10.1038/s41467-019-11070-7</a>"},"article_number":"3176","scopus_import":"1","abstract":[{"lang":"eng","text":"Extracting light from silicon is a longstanding challenge in modern engineering and physics. While silicon has underpinned the past 70 years of electronics advancement, a facile tunable and efficient silicon-based light source remains elusive. Here, we experimentally demonstrate the generation of tunable radiation from a one-dimensional, all-silicon nanograting. Light is generated by the spontaneous emission from the interaction of these nanogratings with low-energy free electrons (2–20 keV) and is recorded in the wavelength range of 800–1600 nm, which includes the silicon transparency window. Tunable free-electron-based light generation from nanoscale silicon gratings with efficiencies approaching those from metallic gratings is demonstrated. We theoretically investigate the feasibility of a scalable, compact, all-silicon tunable light source comprised of a silicon Field Emitter Array integrated with a silicon nanograting that emits at telecommunication wavelengths. Our results reveal the prospects of a CMOS-compatible electrically-pumped silicon light source for possible applications in the mid-infrared and telecommunication wavelengths."}],"publisher":"Springer Nature","main_file_link":[{"url":"https://doi.org/10.1038/s41467-019-11070-7","open_access":"1"}],"author":[{"id":"e2e68fc9-6505-11ef-a541-eb4e72cc3e82","full_name":"Roques-Carmes, Charles","first_name":"Charles","last_name":"Roques-Carmes"},{"last_name":"Kooi","first_name":"Steven E.","full_name":"Kooi, Steven E."},{"first_name":"Yi","last_name":"Yang","full_name":"Yang, Yi"},{"last_name":"Massuda","first_name":"Aviram","full_name":"Massuda, Aviram"},{"full_name":"Keathley, Phillip D.","first_name":"Phillip D.","last_name":"Keathley"},{"full_name":"Zaidi, Aun","first_name":"Aun","last_name":"Zaidi"},{"first_name":"Yujia","last_name":"Yang","full_name":"Yang, Yujia"},{"first_name":"John D.","last_name":"Joannopoulos","full_name":"Joannopoulos, John D."},{"first_name":"Karl K.","last_name":"Berggren","full_name":"Berggren, Karl K."},{"last_name":"Kaminer","first_name":"Ido","full_name":"Kaminer, Ido"},{"full_name":"Soljačić, Marin","first_name":"Marin","last_name":"Soljačić"}],"ddc":["530"],"language":[{"iso":"eng"}],"doi":"10.1038/s41467-019-11070-7","oa":1,"extern":"1","publication_status":"published","intvolume":"        10","year":"2019","DOAJ_listed":"1","date_created":"2026-03-30T12:22:47Z","article_type":"original","day":"18","OA_place":"publisher","publication":"Nature Communications","_id":"21538","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","tmp":{"short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"}},{"article_processing_charge":"No","date_published":"2019-05-31T00:00:00Z","title":"Photonic ising machines go big","volume":12,"month":"05","quality_controlled":"1","date_updated":"2026-04-15T07:05:01Z","publisher":"American Physical Society","abstract":[{"lang":"eng","text":"A new optical processor for solving hard optimization problems breaks previous size records and is based on a highly scalable technology.\r\n"}],"citation":{"chicago":"Roques-Carmes, Charles, and Marin Soljačić. “Photonic Ising Machines Go Big.” <i>Physics</i>. American Physical Society, 2019. <a href=\"https://doi.org/10.1103/physics.12.61\">https://doi.org/10.1103/physics.12.61</a>.","apa":"Roques-Carmes, C., &#38; Soljačić, M. (2019). Photonic ising machines go big. <i>Physics</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physics.12.61\">https://doi.org/10.1103/physics.12.61</a>","short":"C. Roques-Carmes, M. Soljačić, Physics 12 (2019).","ista":"Roques-Carmes C, Soljačić M. 2019. Photonic ising machines go big. Physics. 12, 61.","mla":"Roques-Carmes, Charles, and Marin Soljačić. “Photonic Ising Machines Go Big.” <i>Physics</i>, vol. 12, 61, American Physical Society, 2019, doi:<a href=\"https://doi.org/10.1103/physics.12.61\">10.1103/physics.12.61</a>.","ieee":"C. Roques-Carmes and M. Soljačić, “Photonic ising machines go big,” <i>Physics</i>, vol. 12. American Physical Society, 2019.","ama":"Roques-Carmes C, Soljačić M. Photonic ising machines go big. <i>Physics</i>. 2019;12. doi:<a href=\"https://doi.org/10.1103/physics.12.61\">10.1103/physics.12.61</a>"},"article_number":"61","scopus_import":"1","oa_version":"None","status":"public","type":"journal_article","publication_identifier":{"issn":["1943-2879"]},"OA_type":"closed access","article_type":"comment","date_created":"2026-03-30T12:22:47Z","year":"2019","intvolume":"        12","extern":"1","publication_status":"published","doi":"10.1103/physics.12.61","ddc":["530"],"language":[{"iso":"eng"}],"author":[{"last_name":"Roques-Carmes","first_name":"Charles","full_name":"Roques-Carmes, Charles","id":"e2e68fc9-6505-11ef-a541-eb4e72cc3e82"},{"full_name":"Soljačić, Marin","first_name":"Marin","last_name":"Soljačić"}],"_id":"21557","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication":"Physics","day":"31"},{"year":"2019","date_created":"2026-03-30T12:22:47Z","title":"Towards large-scale photonic neural-network accelerators","article_processing_charge":"No","date_published":"2019-12-01T00:00:00Z","author":[{"last_name":"Hamerly","first_name":"R.","full_name":"Hamerly, R."},{"full_name":"Sludds, A.","first_name":"A.","last_name":"Sludds"},{"full_name":"Bernstein, L.","first_name":"L.","last_name":"Bernstein"},{"first_name":"M.","last_name":"Prabhu","full_name":"Prabhu, M."},{"last_name":"Roques-Carmes","first_name":"Charles","full_name":"Roques-Carmes, Charles","id":"e2e68fc9-6505-11ef-a541-eb4e72cc3e82"},{"full_name":"Carolan, J.","first_name":"J.","last_name":"Carolan"},{"full_name":"Yamamoto, Y.","last_name":"Yamamoto","first_name":"Y."},{"last_name":"Soljacic","first_name":"M.","full_name":"Soljacic, M."},{"last_name":"Englund","first_name":"D.","full_name":"Englund, D."}],"date_updated":"2026-05-05T07:39:32Z","quality_controlled":"1","language":[{"iso":"eng"}],"month":"12","doi":"10.1109/iedm19573.2019.8993624","publication_status":"published","extern":"1","conference":{"start_date":"2019-12-07","name":"IEDM: International Electron Devices Meeting","end_date":"2019-12-11","location":"San Francisco, CA, United States"},"_id":"21568","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"None","scopus_import":"1","citation":{"ista":"Hamerly R, Sludds A, Bernstein L, Prabhu M, Roques-Carmes C, Carolan J, Yamamoto Y, Soljacic M, Englund D. 2019. Towards large-scale photonic neural-network accelerators. 2019 IEEE International Electron Devices Meeting. IEDM: International Electron Devices Meeting.","short":"R. Hamerly, A. Sludds, L. Bernstein, M. Prabhu, C. Roques-Carmes, J. Carolan, Y. Yamamoto, M. Soljacic, D. Englund, in:, 2019 IEEE International Electron Devices Meeting, IEEE, 2019.","mla":"Hamerly, R., et al. “Towards Large-Scale Photonic Neural-Network Accelerators.” <i>2019 IEEE International Electron Devices Meeting</i>, IEEE, 2019, doi:<a href=\"https://doi.org/10.1109/iedm19573.2019.8993624\">10.1109/iedm19573.2019.8993624</a>.","chicago":"Hamerly, R., A. Sludds, L. Bernstein, M. Prabhu, Charles Roques-Carmes, J. Carolan, Y. Yamamoto, M. Soljacic, and D. Englund. “Towards Large-Scale Photonic Neural-Network Accelerators.” In <i>2019 IEEE International Electron Devices Meeting</i>. IEEE, 2019. <a href=\"https://doi.org/10.1109/iedm19573.2019.8993624\">https://doi.org/10.1109/iedm19573.2019.8993624</a>.","apa":"Hamerly, R., Sludds, A., Bernstein, L., Prabhu, M., Roques-Carmes, C., Carolan, J., … Englund, D. (2019). Towards large-scale photonic neural-network accelerators. In <i>2019 IEEE International Electron Devices Meeting</i>. San Francisco, CA, United States: IEEE. <a href=\"https://doi.org/10.1109/iedm19573.2019.8993624\">https://doi.org/10.1109/iedm19573.2019.8993624</a>","ama":"Hamerly R, Sludds A, Bernstein L, et al. Towards large-scale photonic neural-network accelerators. In: <i>2019 IEEE International Electron Devices Meeting</i>. IEEE; 2019. doi:<a href=\"https://doi.org/10.1109/iedm19573.2019.8993624\">10.1109/iedm19573.2019.8993624</a>","ieee":"R. Hamerly <i>et al.</i>, “Towards large-scale photonic neural-network accelerators,” in <i>2019 IEEE International Electron Devices Meeting</i>, San Francisco, CA, United States, 2019."},"abstract":[{"lang":"eng","text":"Optical approaches to AI acceleration have gained intense interest recently due to the potentially breakthrough advantages of photonics: high bandwidth, low power consumption, and efficient data movement. We overview leading photonic AI platforms based on beamsplitter mesh networks, weight banks, and photoelectric multiplication. While the theoretical performance can be orders of magnitude beyond current state of the art, practical issues of chip area, input / output, and crosstalk paint a more nuanced near-term picture of photonic AI acceleration. Both fundamental and near-term limitations to energy efficiency are addressed, and bandwidth limitations due to temporal crosstalk are analyzed."}],"publisher":"IEEE","OA_type":"closed access","day":"01","publication_identifier":{"eissn":["2156-017X"],"eisbn":["9781728140322"]},"type":"conference","publication":"2019 IEEE International Electron Devices Meeting","status":"public"},{"status":"public","publication":"Conference on Lasers and Electro-Optics","type":"conference","publication_identifier":{"eisbn":["9781943580576"]},"day":"01","OA_type":"closed access","publisher":"Optica Publishing Group","citation":{"ieee":"C. Roques-Carmes <i>et al.</i>, “Photonic Recurrent Ising Sampler,” in <i>Conference on Lasers and Electro-Optics</i>, San Jose, CA, United States, 2019.","ama":"Roques-Carmes C, Shen Y, Zanoci C, et al. Photonic Recurrent Ising Sampler. In: <i>Conference on Lasers and Electro-Optics</i>. Optica Publishing Group; 2019. doi:<a href=\"https://doi.org/10.1364/cleo_qels.2019.ftu4c.2\">10.1364/cleo_qels.2019.ftu4c.2</a>","chicago":"Roques-Carmes, Charles, Yichen Shen, Cristian Zanoci, Mihika Prabhu, Fadi Atieh, Li Jing, Tena Dubček, et al. “Photonic Recurrent Ising Sampler.” In <i>Conference on Lasers and Electro-Optics</i>. Optica Publishing Group, 2019. <a href=\"https://doi.org/10.1364/cleo_qels.2019.ftu4c.2\">https://doi.org/10.1364/cleo_qels.2019.ftu4c.2</a>.","apa":"Roques-Carmes, C., Shen, Y., Zanoci, C., Prabhu, M., Atieh, F., Jing, L., … Soljačić, M. (2019). Photonic Recurrent Ising Sampler. In <i>Conference on Lasers and Electro-Optics</i>. San Jose, CA, United States: Optica Publishing Group. <a href=\"https://doi.org/10.1364/cleo_qels.2019.ftu4c.2\">https://doi.org/10.1364/cleo_qels.2019.ftu4c.2</a>","ista":"Roques-Carmes C, Shen Y, Zanoci C, Prabhu M, Atieh F, Jing L, Dubček T, Čeperić V, Joannopoulos JD, Englund D, Soljačić M. 2019. Photonic Recurrent Ising Sampler. Conference on Lasers and Electro-Optics. CLEO: Fundamental Science, FTu4C.2.","short":"C. Roques-Carmes, Y. Shen, C. Zanoci, M. Prabhu, F. Atieh, L. Jing, T. Dubček, V. Čeperić, J.D. Joannopoulos, D. Englund, M. Soljačić, in:, Conference on Lasers and Electro-Optics, Optica Publishing Group, 2019.","mla":"Roques-Carmes, Charles, et al. “Photonic Recurrent Ising Sampler.” <i>Conference on Lasers and Electro-Optics</i>, FTu4C.2, Optica Publishing Group, 2019, doi:<a href=\"https://doi.org/10.1364/cleo_qels.2019.ftu4c.2\">10.1364/cleo_qels.2019.ftu4c.2</a>."},"article_number":"FTu4C.2","abstract":[{"text":"We present the Photonic Recurrent Ising Sampler (PRIS), an algorithm tailored for photonic parallel networks, that can sample distributions of arbitrary Ising problems. The PRIS finds the ground state of general Ising problems and probes critical exponents of universality classes.","lang":"eng"}],"oa_version":"None","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"21620","conference":{"location":"San Jose, CA, United States","end_date":"2019-05-10","name":"CLEO: Fundamental Science","start_date":"2019-05-05"},"extern":"1","publication_status":"published","month":"06","doi":"10.1364/cleo_qels.2019.ftu4c.2","language":[{"iso":"eng"}],"author":[{"first_name":"Charles","last_name":"Roques-Carmes","id":"e2e68fc9-6505-11ef-a541-eb4e72cc3e82","full_name":"Roques-Carmes, Charles"},{"full_name":"Shen, Yichen","first_name":"Yichen","last_name":"Shen"},{"first_name":"Cristian","last_name":"Zanoci","full_name":"Zanoci, Cristian"},{"last_name":"Prabhu","first_name":"Mihika","full_name":"Prabhu, Mihika"},{"last_name":"Atieh","first_name":"Fadi","full_name":"Atieh, Fadi"},{"first_name":"Li","last_name":"Jing","full_name":"Jing, Li"},{"last_name":"Dubček","first_name":"Tena","full_name":"Dubček, Tena"},{"full_name":"Čeperić, Vladimir","last_name":"Čeperić","first_name":"Vladimir"},{"full_name":"Joannopoulos, John D.","last_name":"Joannopoulos","first_name":"John D."},{"first_name":"Dirk","last_name":"Englund","full_name":"Englund, Dirk"},{"full_name":"Soljačić, Marin","last_name":"Soljačić","first_name":"Marin"}],"quality_controlled":"1","date_updated":"2026-05-05T06:51:29Z","article_processing_charge":"No","date_published":"2019-06-01T00:00:00Z","title":"Photonic Recurrent Ising Sampler","date_created":"2026-03-30T12:22:48Z","year":"2019"},{"_id":"21627","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","conference":{"location":"San Jose, CA, United States","end_date":"2019-05-10","name":"CLEO: Science and Innovations","start_date":"2019-05-05"},"scopus_import":"1","citation":{"chicago":"Roques-Carmes, Charles, Mihika Prabhu, Yichen Shen, Nicholas Harris, Li Jing, Jacques Carolan, Ryan Hamerly, et al. “Integrated Nanophotonic Ising Sampler.” In <i>Conference on Lasers and Electro-Optics</i>. Optica Publishing Group, 2019. <a href=\"https://doi.org/10.1364/cleo_si.2019.sf1n.1\">https://doi.org/10.1364/cleo_si.2019.sf1n.1</a>.","apa":"Roques-Carmes, C., Prabhu, M., Shen, Y., Harris, N., Jing, L., Carolan, J., … Soljacic, M. (2019). Integrated nanophotonic ising sampler. In <i>Conference on Lasers and Electro-Optics</i>. San Jose, CA, United States: Optica Publishing Group. <a href=\"https://doi.org/10.1364/cleo_si.2019.sf1n.1\">https://doi.org/10.1364/cleo_si.2019.sf1n.1</a>","short":"C. Roques-Carmes, M. Prabhu, Y. Shen, N. Harris, L. Jing, J. Carolan, R. Hamerly, T. Baehr-Jones, M. Hochberg, V. Ceperic, J.D. Joannopoulos, D. Englund, M. Soljacic, in:, Conference on Lasers and Electro-Optics, Optica Publishing Group, 2019.","ista":"Roques-Carmes C, Prabhu M, Shen Y, Harris N, Jing L, Carolan J, Hamerly R, Baehr-Jones T, Hochberg M, Ceperic V, Joannopoulos JD, Englund D, Soljacic M. 2019. Integrated nanophotonic ising sampler. Conference on Lasers and Electro-Optics. CLEO: Science and Innovations, SF1N.1.","mla":"Roques-Carmes, Charles, et al. “Integrated Nanophotonic Ising Sampler.” <i>Conference on Lasers and Electro-Optics</i>, SF1N.1, Optica Publishing Group, 2019, doi:<a href=\"https://doi.org/10.1364/cleo_si.2019.sf1n.1\">10.1364/cleo_si.2019.sf1n.1</a>.","ieee":"C. Roques-Carmes <i>et al.</i>, “Integrated nanophotonic ising sampler,” in <i>Conference on Lasers and Electro-Optics</i>, San Jose, CA, United States, 2019.","ama":"Roques-Carmes C, Prabhu M, Shen Y, et al. Integrated nanophotonic ising sampler. In: <i>Conference on Lasers and Electro-Optics</i>. Optica Publishing Group; 2019. doi:<a href=\"https://doi.org/10.1364/cleo_si.2019.sf1n.1\">10.1364/cleo_si.2019.sf1n.1</a>"},"abstract":[{"text":"We demonstrate an integrated silicon photonic Markov Chain Monte Carlo sampler capable of high-probability convergence to the ground state of various 4-spin Ising graphs. Robustness to getting trapped in local minima is enhanced by experimental system noise.","lang":"eng"}],"article_number":"SF1N.1","oa_version":"None","publisher":"Optica Publishing Group","OA_type":"closed access","day":"01","type":"conference","publication_identifier":{"issnl":["2162-2701"],"eisbn":["9781943580576"]},"publication":"Conference on Lasers and Electro-Optics","status":"public","year":"2019","title":"Integrated nanophotonic ising sampler","date_created":"2026-03-30T12:22:48Z","article_processing_charge":"No","date_published":"2019-06-01T00:00:00Z","language":[{"iso":"eng"}],"date_updated":"2026-05-05T06:52:44Z","author":[{"full_name":"Roques-Carmes, Charles","id":"e2e68fc9-6505-11ef-a541-eb4e72cc3e82","last_name":"Roques-Carmes","first_name":"Charles"},{"first_name":"Mihika","last_name":"Prabhu","full_name":"Prabhu, Mihika"},{"last_name":"Shen","first_name":"Yichen","full_name":"Shen, Yichen"},{"last_name":"Harris","first_name":"Nicholas","full_name":"Harris, Nicholas"},{"full_name":"Jing, Li","last_name":"Jing","first_name":"Li"},{"full_name":"Carolan, Jacques","last_name":"Carolan","first_name":"Jacques"},{"full_name":"Hamerly, Ryan","last_name":"Hamerly","first_name":"Ryan"},{"full_name":"Baehr-Jones, Tom","first_name":"Tom","last_name":"Baehr-Jones"},{"full_name":"Hochberg, Michael","first_name":"Michael","last_name":"Hochberg"},{"full_name":"Ceperic, Vladimir","first_name":"Vladimir","last_name":"Ceperic"},{"full_name":"Joannopoulos, John D.","first_name":"John D.","last_name":"Joannopoulos"},{"full_name":"Englund, Dirk","first_name":"Dirk","last_name":"Englund"},{"first_name":"Marin","last_name":"Soljacic","full_name":"Soljacic, Marin"}],"quality_controlled":"1","publication_status":"published","extern":"1","doi":"10.1364/cleo_si.2019.sf1n.1","month":"06"},{"doi":"10.1021/acs.macromol.9b00882","extern":"1","publication_status":"published","intvolume":"        52","author":[{"full_name":"Mostafavi, Seyed Hossein","first_name":"Seyed Hossein","last_name":"Mostafavi"},{"last_name":"Li","first_name":"Wangxiang","full_name":"Li, Wangxiang"},{"first_name":"Kyle D.","last_name":"Clark","full_name":"Clark, Kyle D."},{"id":"7aca2cfc-46cf-11f0-abd3-8c96b5186745","full_name":"Stricker, Friedrich J","last_name":"Stricker","first_name":"Friedrich J"},{"full_name":"Alaniz, Javier Read de","first_name":"Javier Read de","last_name":"Alaniz"},{"full_name":"Bardeen, Christopher J.","last_name":"Bardeen","first_name":"Christopher J."}],"language":[{"iso":"eng"}],"ddc":["540"],"date_created":"2026-05-06T10:52:25Z","article_type":"original","year":"2019","publication":"Macromolecules","day":"16","page":"6311-6317","issue":"16","_id":"21814","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"08","quality_controlled":"1","date_updated":"2026-05-11T08:48:38Z","title":"Photoinduced deadhesion of a polymer film using a photochromic donor-acceptor Stenhouse adduct","article_processing_charge":"No","date_published":"2019-08-16T00:00:00Z","volume":52,"publication_identifier":{"issn":["0024-9297"],"eissn":["1520-5835"]},"type":"journal_article","status":"public","OA_type":"closed access","publisher":"American Chemical Society","oa_version":"None","scopus_import":"1","abstract":[{"text":"Photoisomerization of molecules dissolved in a polymer film can modulate its properties. In a previous paper (Mostafavi, S. H.; Macromolecules 2018, 51, 2388−2394), it was found that the ultraviolet light-induced photoisomerization of spiropyran dopants could substantially increase adhesion to a glass surface. In this work, a different photochromic reaction, the visible-light-induced cyclization of a donor–acceptor Stenhouse adduct (DASA), leads to the opposite effect: the deadhesion of a polystyrene film from a clean glass surface. Measurements of the shear and pull-off adhesion strengths before and after visible irradiation show a light-induced decrease of 20–30%. The time required for delamination in water shows an even more dramatic decrease of 90%. Changes in the water contact angle and other measurements suggest that molecular-level noncovalent interactions between the polymer and glass are weakened after photoisomerization, possibly due to the molecular contraction of the DASA that disrupts the interaction between its amine groups and the surface silanols. The ability to reduce polymer adhesion using visible light enables the controlled release of dye molecules from a glass container, where these have been stored as a dry powder, into an aqueous solution. Embedding photochromic molecules in a polymer can lead to new effects that may have practical applications in stimuli-responsive materials.","lang":"eng"}],"citation":{"ama":"Mostafavi SH, Li W, Clark KD, Stricker FJ, Alaniz JR de, Bardeen CJ. Photoinduced deadhesion of a polymer film using a photochromic donor-acceptor Stenhouse adduct. <i>Macromolecules</i>. 2019;52(16):6311-6317. doi:<a href=\"https://doi.org/10.1021/acs.macromol.9b00882\">10.1021/acs.macromol.9b00882</a>","ieee":"S. H. Mostafavi, W. Li, K. D. Clark, F. J. Stricker, J. R. de Alaniz, and C. J. Bardeen, “Photoinduced deadhesion of a polymer film using a photochromic donor-acceptor Stenhouse adduct,” <i>Macromolecules</i>, vol. 52, no. 16. American Chemical Society, pp. 6311–6317, 2019.","mla":"Mostafavi, Seyed Hossein, et al. “Photoinduced Deadhesion of a Polymer Film Using a Photochromic Donor-Acceptor Stenhouse Adduct.” <i>Macromolecules</i>, vol. 52, no. 16, American Chemical Society, 2019, pp. 6311–17, doi:<a href=\"https://doi.org/10.1021/acs.macromol.9b00882\">10.1021/acs.macromol.9b00882</a>.","short":"S.H. Mostafavi, W. Li, K.D. Clark, F.J. Stricker, J.R. de Alaniz, C.J. Bardeen, Macromolecules 52 (2019) 6311–6317.","ista":"Mostafavi SH, Li W, Clark KD, Stricker FJ, Alaniz JR de, Bardeen CJ. 2019. Photoinduced deadhesion of a polymer film using a photochromic donor-acceptor Stenhouse adduct. Macromolecules. 52(16), 6311–6317.","apa":"Mostafavi, S. H., Li, W., Clark, K. D., Stricker, F. J., Alaniz, J. R. de, &#38; Bardeen, C. J. (2019). Photoinduced deadhesion of a polymer film using a photochromic donor-acceptor Stenhouse adduct. <i>Macromolecules</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acs.macromol.9b00882\">https://doi.org/10.1021/acs.macromol.9b00882</a>","chicago":"Mostafavi, Seyed Hossein, Wangxiang Li, Kyle D. Clark, Friedrich J Stricker, Javier Read de Alaniz, and Christopher J. Bardeen. “Photoinduced Deadhesion of a Polymer Film Using a Photochromic Donor-Acceptor Stenhouse Adduct.” <i>Macromolecules</i>. American Chemical Society, 2019. <a href=\"https://doi.org/10.1021/acs.macromol.9b00882\">https://doi.org/10.1021/acs.macromol.9b00882</a>."}},{"publication":"Advanced Materials","day":"19","pmid":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"13366","issue":"20","intvolume":"        32","publication_status":"published","extern":"1","doi":"10.1002/adma.201905866","language":[{"iso":"eng"}],"author":[{"first_name":"Tong","last_name":"Bian","full_name":"Bian, Tong"},{"full_name":"Chu, Zonglin","first_name":"Zonglin","last_name":"Chu"},{"first_name":"Rafal","last_name":"Klajn","full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b"}],"article_type":"original","date_created":"2023-08-01T09:37:26Z","year":"2019","status":"public","type":"journal_article","publication_identifier":{"eissn":["1521-4095"],"issn":["0935-9648"]},"publisher":"Wiley","scopus_import":"1","abstract":[{"text":"The ability to reversibly assemble nanoparticles using light is both fundamentally interesting and important for applications ranging from reversible data storage to controlled drug delivery. Here, the diverse approaches that have so far been developed to control the self-assembly of nanoparticles using light are reviewed and compared. These approaches include functionalizing nanoparticles with monolayers of photoresponsive molecules, placing them in photoresponsive media capable of reversibly protonating the particles under light, and decorating plasmonic nanoparticles with thermoresponsive polymers, to name just a few. The applicability of these methods to larger, micrometer-sized particles is also discussed. Finally, several perspectives on further developments in the field are offered.","lang":"eng"}],"article_number":"1905866","citation":{"short":"T. Bian, Z. Chu, R. Klajn, Advanced Materials 32 (2019).","ista":"Bian T, Chu Z, Klajn R. 2019. The many ways to assemble nanoparticles using light. Advanced Materials. 32(20), 1905866.","mla":"Bian, Tong, et al. “The Many Ways to Assemble Nanoparticles Using Light.” <i>Advanced Materials</i>, vol. 32, no. 20, 1905866, Wiley, 2019, doi:<a href=\"https://doi.org/10.1002/adma.201905866\">10.1002/adma.201905866</a>.","chicago":"Bian, Tong, Zonglin Chu, and Rafal Klajn. “The Many Ways to Assemble Nanoparticles Using Light.” <i>Advanced Materials</i>. Wiley, 2019. <a href=\"https://doi.org/10.1002/adma.201905866\">https://doi.org/10.1002/adma.201905866</a>.","apa":"Bian, T., Chu, Z., &#38; Klajn, R. (2019). The many ways to assemble nanoparticles using light. <i>Advanced Materials</i>. Wiley. <a href=\"https://doi.org/10.1002/adma.201905866\">https://doi.org/10.1002/adma.201905866</a>","ama":"Bian T, Chu Z, Klajn R. The many ways to assemble nanoparticles using light. <i>Advanced Materials</i>. 2019;32(20). doi:<a href=\"https://doi.org/10.1002/adma.201905866\">10.1002/adma.201905866</a>","ieee":"T. Bian, Z. Chu, and R. Klajn, “The many ways to assemble nanoparticles using light,” <i>Advanced Materials</i>, vol. 32, no. 20. Wiley, 2019."},"keyword":["Mechanical Engineering","Mechanics of Materials","General Materials Science"],"oa_version":"None","month":"11","date_updated":"2024-10-14T12:13:25Z","quality_controlled":"1","external_id":{"pmid":["31709655"]},"article_processing_charge":"No","date_published":"2019-11-19T00:00:00Z","title":"The many ways to assemble nanoparticles using light","volume":32},{"publication":"Beilstein Journal of Organic Chemistry","day":"10","page":"2398-2407","pmid":1,"_id":"13369","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","intvolume":"        15","oa":1,"extern":"1","publication_status":"published","doi":"10.3762/bjoc.15.232","language":[{"iso":"eng"}],"author":[{"last_name":"Hanopolskyi","first_name":"Anton I","full_name":"Hanopolskyi, Anton I"},{"full_name":"De, Soumen","last_name":"De","first_name":"Soumen"},{"last_name":"Białek","first_name":"Michał J","full_name":"Białek, Michał J"},{"last_name":"Diskin-Posner","first_name":"Yael","full_name":"Diskin-Posner, Yael"},{"full_name":"Avram, Liat","first_name":"Liat","last_name":"Avram"},{"first_name":"Moran","last_name":"Feller","full_name":"Feller, Moran"},{"id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","full_name":"Klajn, Rafal","last_name":"Klajn","first_name":"Rafal"}],"article_type":"original","date_created":"2023-08-01T09:38:06Z","year":"2019","status":"public","type":"journal_article","publication_identifier":{"eissn":["1860-5397"]},"main_file_link":[{"open_access":"1","url":"https://doi.org/10.3762/bjoc.15.232"}],"publisher":"Beilstein Institut","citation":{"chicago":"Hanopolskyi, Anton I, Soumen De, Michał J Białek, Yael Diskin-Posner, Liat Avram, Moran Feller, and Rafal Klajn. “Reversible Switching of Arylazopyrazole within a Metal–Organic Cage.” <i>Beilstein Journal of Organic Chemistry</i>. Beilstein Institut, 2019. <a href=\"https://doi.org/10.3762/bjoc.15.232\">https://doi.org/10.3762/bjoc.15.232</a>.","apa":"Hanopolskyi, A. I., De, S., Białek, M. J., Diskin-Posner, Y., Avram, L., Feller, M., &#38; Klajn, R. (2019). Reversible switching of arylazopyrazole within a metal–organic cage. <i>Beilstein Journal of Organic Chemistry</i>. Beilstein Institut. <a href=\"https://doi.org/10.3762/bjoc.15.232\">https://doi.org/10.3762/bjoc.15.232</a>","ista":"Hanopolskyi AI, De S, Białek MJ, Diskin-Posner Y, Avram L, Feller M, Klajn R. 2019. Reversible switching of arylazopyrazole within a metal–organic cage. Beilstein Journal of Organic Chemistry. 15, 2398–2407.","short":"A.I. Hanopolskyi, S. De, M.J. Białek, Y. Diskin-Posner, L. Avram, M. Feller, R. Klajn, Beilstein Journal of Organic Chemistry 15 (2019) 2398–2407.","mla":"Hanopolskyi, Anton I., et al. “Reversible Switching of Arylazopyrazole within a Metal–Organic Cage.” <i>Beilstein Journal of Organic Chemistry</i>, vol. 15, Beilstein Institut, 2019, pp. 2398–407, doi:<a href=\"https://doi.org/10.3762/bjoc.15.232\">10.3762/bjoc.15.232</a>.","ieee":"A. I. Hanopolskyi <i>et al.</i>, “Reversible switching of arylazopyrazole within a metal–organic cage,” <i>Beilstein Journal of Organic Chemistry</i>, vol. 15. Beilstein Institut, pp. 2398–2407, 2019.","ama":"Hanopolskyi AI, De S, Białek MJ, et al. Reversible switching of arylazopyrazole within a metal–organic cage. <i>Beilstein Journal of Organic Chemistry</i>. 2019;15:2398-2407. doi:<a href=\"https://doi.org/10.3762/bjoc.15.232\">10.3762/bjoc.15.232</a>"},"keyword":["Organic Chemistry"],"abstract":[{"lang":"eng","text":"Arylazopyrazoles represent a new family of molecular photoswitches characterized by a near-quantitative conversion between two states and long thermal half-lives of the metastable state. Here, we investigated the behavior of a model arylazopyrazole in the presence of a self-assembled cage based on Pd–imidazole coordination. Owing to its high water solubility, the cage can solubilize the E isomer of arylazopyrazole, which, by itself, is not soluble in water. NMR spectroscopy and X-ray crystallography have independently demonstrated that each cage can encapsulate two molecules of E-arylazopyrazole. UV-induced switching to the Z isomer was accompanied by the release of one of the two guests from the cage and the formation of a 1:1 cage/Z-arylazopyrazole inclusion complex. DFT calculations suggest that this process involves a dramatic change in the conformation of the cage. Back-isomerization was induced with green light and resulted in the initial 1:2 cage/E-arylazopyrazole complex. This back-isomerization reaction also proceeded in the dark, with a rate significantly higher than in the absence of the cage."}],"scopus_import":"1","oa_version":"Published Version","month":"10","date_updated":"2024-10-14T12:13:46Z","quality_controlled":"1","external_id":{"pmid":["31666874"]},"date_published":"2019-10-10T00:00:00Z","article_processing_charge":"No","title":"Reversible switching of arylazopyrazole within a metal–organic cage","volume":15},{"title":"Polysilsesquioxane nanowire networks as an “Artificial Solvent” for reversible operation of photochromic molecules","article_processing_charge":"No","date_published":"2019-09-20T00:00:00Z","volume":19,"month":"09","external_id":{"pmid":["31539469"]},"quality_controlled":"1","date_updated":"2024-10-14T12:13:57Z","publisher":"American Chemical Society","citation":{"ama":"Chu Z, Klajn R. Polysilsesquioxane nanowire networks as an “Artificial Solvent” for reversible operation of photochromic molecules. <i>Nano Letters</i>. 2019;19(10):7106-7111. doi:<a href=\"https://doi.org/10.1021/acs.nanolett.9b02642\">10.1021/acs.nanolett.9b02642</a>","ieee":"Z. Chu and R. Klajn, “Polysilsesquioxane nanowire networks as an ‘Artificial Solvent’ for reversible operation of photochromic molecules,” <i>Nano Letters</i>, vol. 19, no. 10. American Chemical Society, pp. 7106–7111, 2019.","mla":"Chu, Zonglin, and Rafal Klajn. “Polysilsesquioxane Nanowire Networks as an ‘Artificial Solvent’ for Reversible Operation of Photochromic Molecules.” <i>Nano Letters</i>, vol. 19, no. 10, American Chemical Society, 2019, pp. 7106–11, doi:<a href=\"https://doi.org/10.1021/acs.nanolett.9b02642\">10.1021/acs.nanolett.9b02642</a>.","ista":"Chu Z, Klajn R. 2019. Polysilsesquioxane nanowire networks as an “Artificial Solvent” for reversible operation of photochromic molecules. Nano Letters. 19(10), 7106–7111.","short":"Z. Chu, R. Klajn, Nano Letters 19 (2019) 7106–7111.","apa":"Chu, Z., &#38; Klajn, R. (2019). Polysilsesquioxane nanowire networks as an “Artificial Solvent” for reversible operation of photochromic molecules. <i>Nano Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acs.nanolett.9b02642\">https://doi.org/10.1021/acs.nanolett.9b02642</a>","chicago":"Chu, Zonglin, and Rafal Klajn. “Polysilsesquioxane Nanowire Networks as an ‘Artificial Solvent’ for Reversible Operation of Photochromic Molecules.” <i>Nano Letters</i>. American Chemical Society, 2019. <a href=\"https://doi.org/10.1021/acs.nanolett.9b02642\">https://doi.org/10.1021/acs.nanolett.9b02642</a>."},"scopus_import":"1","keyword":["Mechanical Engineering","Condensed Matter Physics","General Materials Science","General Chemistry","Bioengineering"],"abstract":[{"text":"Efficient isomerization of photochromic molecules often requires conformational freedom and is typically not available under solvent-free conditions. Here, we report a general methodology allowing for reversible switching of such molecules on the surfaces of solid materials. Our method is based on dispersing photochromic compounds within polysilsesquioxane nanowire networks (PNNs), which can be fabricated as transparent, highly porous, micrometer-thick layers on various substrates. We found that azobenzene switching within the PNNs proceeded unusually fast compared with the same molecules in liquid solvents. Efficient isomerization of another photochromic system, spiropyran, from a colorless to a colored form was used to create reversible images in PNN-coated glass. The coloration reaction could be induced with sunlight and is of interest for developing “smart” windows.","lang":"eng"}],"oa_version":"None","type":"journal_article","publication_identifier":{"issn":["1530-6984"],"eissn":["1530-6992"]},"status":"public","date_created":"2023-08-01T09:38:23Z","article_type":"original","year":"2019","extern":"1","publication_status":"published","doi":"10.1021/acs.nanolett.9b02642","intvolume":"        19","language":[{"iso":"eng"}],"author":[{"full_name":"Chu, Zonglin","last_name":"Chu","first_name":"Zonglin"},{"id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","full_name":"Klajn, Rafal","last_name":"Klajn","first_name":"Rafal"}],"page":"7106-7111","_id":"13370","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","issue":"10","pmid":1,"publication":"Nano Letters","day":"20"},{"oa_version":"Published Version","scopus_import":"1","citation":{"mla":"Białek, Michał J., and Rafal Klajn. “Diamond Grows Up.” <i>Chem</i>, vol. 5, no. 9, Elsevier, 2019, pp. 2283–85, doi:<a href=\"https://doi.org/10.1016/j.chempr.2019.08.012\">10.1016/j.chempr.2019.08.012</a>.","ista":"Białek MJ, Klajn R. 2019. Diamond grows up. Chem. 5(9), 2283–2285.","short":"M.J. Białek, R. Klajn, Chem 5 (2019) 2283–2285.","apa":"Białek, M. J., &#38; Klajn, R. (2019). Diamond grows up. <i>Chem</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.chempr.2019.08.012\">https://doi.org/10.1016/j.chempr.2019.08.012</a>","chicago":"Białek, Michał J., and Rafal Klajn. “Diamond Grows Up.” <i>Chem</i>. Elsevier, 2019. <a href=\"https://doi.org/10.1016/j.chempr.2019.08.012\">https://doi.org/10.1016/j.chempr.2019.08.012</a>.","ama":"Białek MJ, Klajn R. Diamond grows up. <i>Chem</i>. 2019;5(9):2283-2285. doi:<a href=\"https://doi.org/10.1016/j.chempr.2019.08.012\">10.1016/j.chempr.2019.08.012</a>","ieee":"M. J. Białek and R. Klajn, “Diamond grows up,” <i>Chem</i>, vol. 5, no. 9. Elsevier, pp. 2283–2285, 2019."},"abstract":[{"lang":"eng","text":"Diamondoid nanoporous crystals represent a synthetically challenging class of materials that typically have been obtained from tetrahedral building blocks. In this issue of Chem, Stoddart and coworkers demonstrate that it is possible to generate diamondoid frameworks from a hexacationic building block lacking a tetrahedral symmetry. These results highlight the great potential of self-assembly for rapidly transforming small molecules into structurally complex functional materials."}],"keyword":["Materials Chemistry","Biochemistry (medical)","General Chemical Engineering","Environmental Chemistry","Biochemistry","General Chemistry"],"publisher":"Elsevier","main_file_link":[{"url":"https://doi.org/10.1016/j.chempr.2019.08.012","open_access":"1"}],"publication_identifier":{"issn":["2451-9308"],"eissn":["2451-9294"]},"type":"journal_article","status":"public","volume":5,"title":"Diamond grows up","date_published":"2019-09-12T00:00:00Z","article_processing_charge":"No","date_updated":"2024-10-14T12:14:05Z","quality_controlled":"1","month":"09","issue":"9","_id":"13371","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","page":"2283-2285","day":"12","publication":"Chem","year":"2019","date_created":"2023-08-01T09:38:38Z","article_type":"original","author":[{"first_name":"Michał J.","last_name":"Białek","full_name":"Białek, Michał J."},{"full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","first_name":"Rafal","last_name":"Klajn"}],"language":[{"iso":"eng"}],"doi":"10.1016/j.chempr.2019.08.012","oa":1,"publication_status":"published","extern":"1","intvolume":"         5"},{"year":"2019","article_type":"original","date_created":"2023-08-01T09:38:52Z","author":[{"last_name":"Grzelczak","first_name":"Marek","full_name":"Grzelczak, Marek"},{"full_name":"Liz-Marzán, Luis M.","first_name":"Luis M.","last_name":"Liz-Marzán"},{"full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","first_name":"Rafal","last_name":"Klajn"}],"language":[{"iso":"eng"}],"intvolume":"        48","doi":"10.1039/c8cs00787j","oa":1,"extern":"1","publication_status":"published","pmid":1,"issue":"5","_id":"13372","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","page":"1342-1361","day":"28","publication":"Chemical Society Reviews","volume":48,"date_published":"2019-01-28T00:00:00Z","article_processing_charge":"No","title":"Stimuli-responsive self-assembly of nanoparticles","quality_controlled":"1","date_updated":"2024-10-14T12:14:14Z","external_id":{"pmid":["30688963"]},"month":"01","oa_version":"Published Version","keyword":["General Chemistry"],"citation":{"ieee":"M. Grzelczak, L. M. Liz-Marzán, and R. Klajn, “Stimuli-responsive self-assembly of nanoparticles,” <i>Chemical Society Reviews</i>, vol. 48, no. 5. Royal Society of Chemistry, pp. 1342–1361, 2019.","ama":"Grzelczak M, Liz-Marzán LM, Klajn R. Stimuli-responsive self-assembly of nanoparticles. <i>Chemical Society Reviews</i>. 2019;48(5):1342-1361. doi:<a href=\"https://doi.org/10.1039/c8cs00787j\">10.1039/c8cs00787j</a>","apa":"Grzelczak, M., Liz-Marzán, L. M., &#38; Klajn, R. (2019). Stimuli-responsive self-assembly of nanoparticles. <i>Chemical Society Reviews</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/c8cs00787j\">https://doi.org/10.1039/c8cs00787j</a>","chicago":"Grzelczak, Marek, Luis M. Liz-Marzán, and Rafal Klajn. “Stimuli-Responsive Self-Assembly of Nanoparticles.” <i>Chemical Society Reviews</i>. Royal Society of Chemistry, 2019. <a href=\"https://doi.org/10.1039/c8cs00787j\">https://doi.org/10.1039/c8cs00787j</a>.","mla":"Grzelczak, Marek, et al. “Stimuli-Responsive Self-Assembly of Nanoparticles.” <i>Chemical Society Reviews</i>, vol. 48, no. 5, Royal Society of Chemistry, 2019, pp. 1342–61, doi:<a href=\"https://doi.org/10.1039/c8cs00787j\">10.1039/c8cs00787j</a>.","short":"M. Grzelczak, L.M. Liz-Marzán, R. Klajn, Chemical Society Reviews 48 (2019) 1342–1361.","ista":"Grzelczak M, Liz-Marzán LM, Klajn R. 2019. Stimuli-responsive self-assembly of nanoparticles. Chemical Society Reviews. 48(5), 1342–1361."},"scopus_import":"1","abstract":[{"text":"The capacity to respond or adapt to environmental changes is an intrinsic property of living systems that comprise highly-connected subcomponents communicating through chemical networks. The development of responsive synthetic systems is a relatively new research area that covers different disciplines, among which nanochemistry brings conceptually new demonstrations. Especially attractive are ligand-protected gold nanoparticles, which have been extensively used over the last decade as building blocks in constructing superlattices or dynamic aggregates, under the effect of an applied stimulus. To reflect the importance of surface chemistry and nanoparticle core composition in the dynamic self-assembly of nanoparticles, we provide here an overview of various available stimuli, as tools for synthetic chemists to exploit. Along with this task, the review starts with the use of chemical stimuli such as solvent, pH, gases, metal ions or biomolecules. It then focuses on physical stimuli: temperature, magnetic and electric fields, as well as light. To reflect on the increasing complexity of current architectures, we discuss systems that are responsive to more than one stimulus, to finally encourage further research by proposing future challenges.","lang":"eng"}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1039/C8CS00787J"}],"publisher":"Royal Society of Chemistry","status":"public","publication_identifier":{"issn":["0306-0012"],"eissn":["1460-4744"]},"type":"journal_article"},{"language":[{"iso":"eng"}],"author":[{"last_name":"Chu","first_name":"Zonglin","full_name":"Chu, Zonglin"},{"last_name":"Han","first_name":"Yanxiao","full_name":"Han, Yanxiao"},{"last_name":"Bian","first_name":"Tong","full_name":"Bian, Tong"},{"last_name":"De","first_name":"Soumen","full_name":"De, Soumen"},{"full_name":"Král, Petr","first_name":"Petr","last_name":"Král"},{"full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","first_name":"Rafal","last_name":"Klajn"}],"intvolume":"       141","extern":"1","publication_status":"published","doi":"10.1021/jacs.8b09638","year":"2019","article_type":"original","date_created":"2023-08-01T09:39:19Z","day":"06","publication":"Journal of the American Chemical Society","pmid":1,"_id":"13373","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","issue":"5","page":"1949-1960","quality_controlled":"1","date_updated":"2024-10-14T12:14:23Z","external_id":{"pmid":["30595017"]},"month":"02","volume":141,"date_published":"2019-02-06T00:00:00Z","article_processing_charge":"No","title":"Supramolecular control of azobenzene switching on nanoparticles","status":"public","type":"journal_article","publication_identifier":{"issn":["0002-7863"],"eissn":["1520-5126"]},"citation":{"mla":"Chu, Zonglin, et al. “Supramolecular Control of Azobenzene Switching on Nanoparticles.” <i>Journal of the American Chemical Society</i>, vol. 141, no. 5, American Chemical Society, 2019, pp. 1949–60, doi:<a href=\"https://doi.org/10.1021/jacs.8b09638\">10.1021/jacs.8b09638</a>.","ista":"Chu Z, Han Y, Bian T, De S, Král P, Klajn R. 2019. Supramolecular control of azobenzene switching on nanoparticles. Journal of the American Chemical Society. 141(5), 1949–1960.","short":"Z. Chu, Y. Han, T. Bian, S. De, P. Král, R. Klajn, Journal of the American Chemical Society 141 (2019) 1949–1960.","apa":"Chu, Z., Han, Y., Bian, T., De, S., Král, P., &#38; Klajn, R. (2019). Supramolecular control of azobenzene switching on nanoparticles. <i>Journal of the American Chemical Society</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/jacs.8b09638\">https://doi.org/10.1021/jacs.8b09638</a>","chicago":"Chu, Zonglin, Yanxiao Han, Tong Bian, Soumen De, Petr Král, and Rafal Klajn. “Supramolecular Control of Azobenzene Switching on Nanoparticles.” <i>Journal of the American Chemical Society</i>. American Chemical Society, 2019. <a href=\"https://doi.org/10.1021/jacs.8b09638\">https://doi.org/10.1021/jacs.8b09638</a>.","ama":"Chu Z, Han Y, Bian T, De S, Král P, Klajn R. Supramolecular control of azobenzene switching on nanoparticles. <i>Journal of the American Chemical Society</i>. 2019;141(5):1949-1960. doi:<a href=\"https://doi.org/10.1021/jacs.8b09638\">10.1021/jacs.8b09638</a>","ieee":"Z. Chu, Y. Han, T. Bian, S. De, P. Král, and R. Klajn, “Supramolecular control of azobenzene switching on nanoparticles,” <i>Journal of the American Chemical Society</i>, vol. 141, no. 5. American Chemical Society, pp. 1949–1960, 2019."},"keyword":["Colloid and Surface Chemistry","Biochemistry","General Chemistry","Catalysis"],"abstract":[{"lang":"eng","text":"The reversible photoisomerization of azobenzene has been utilized to construct a plethora of systems in which optical, electronic, catalytic, and other properties can be controlled by light. However, owing to azobenzene’s hydrophobic nature, most of these examples have been realized only in organic solvents, and systems operating in water are relatively scarce. Here, we show that by coadsorbing the inherently hydrophobic azobenzenes with water-solubilizing ligands on the same nanoparticulate platforms, it is possible to render them essentially water-soluble. To this end, we developed a modified nanoparticle functionalization procedure allowing us to precisely fine-tune the amount of azobenzene on the functionalized nanoparticles. Molecular dynamics simulations helped us to identify two distinct supramolecular architectures (depending on the length of the background ligand) on these nanoparticles, which can explain their excellent aqueous solubilities. Azobenzenes adsorbed on these water-soluble nanoparticles exhibit highly reversible photoisomerization upon exposure to UV and visible light. Importantly, the mixed-monolayer approach allowed us to systematically investigate how the background ligand affects the switching properties of azobenzene. We found that the nature of the background ligand has a profound effect on the kinetics of azobenzene switching. For example, a hydroxy-terminated background ligand is capable of accelerating the back-isomerization reaction by more than 6000-fold. These results pave the way toward the development of novel light-responsive nanomaterials operating in aqueous media and, in the long run, in biological environments."}],"scopus_import":"1","oa_version":"Published Version","publisher":"American Chemical Society"},{"extern":"1","oa":1,"publication_status":"published","doi":"10.1051/0004-6361/201935854","intvolume":"       631","language":[{"iso":"eng"}],"author":[{"full_name":"Zapartas, Emmanouil","last_name":"Zapartas","first_name":"Emmanouil"},{"first_name":"Selma E.","last_name":"de Mink","full_name":"de Mink, Selma E."},{"full_name":"Justham, Stephen","last_name":"Justham","first_name":"Stephen"},{"last_name":"Smith","first_name":"Nathan","full_name":"Smith, Nathan"},{"first_name":"Alex","last_name":"de Koter","full_name":"de Koter, Alex"},{"last_name":"Renzo","first_name":"Mathieu","full_name":"Renzo, Mathieu"},{"last_name":"Arcavi","first_name":"Iair","full_name":"Arcavi, Iair"},{"first_name":"Rob","last_name":"Farmer","full_name":"Farmer, Rob"},{"full_name":"Götberg, Ylva Louise Linsdotter","id":"d0648d0c-0f64-11ee-a2e0-dd0faa2e4f7d","orcid":"0000-0002-6960-6911","last_name":"Götberg","first_name":"Ylva Louise Linsdotter"},{"full_name":"Toonen, Silvia","last_name":"Toonen","first_name":"Silvia"}],"date_created":"2023-08-03T10:13:52Z","article_type":"original","year":"2019","publication":"Astronomy & Astrophysics","day":"20","_id":"13468","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"11","external_id":{"arxiv":["1907.06687"]},"date_updated":"2023-08-09T12:36:09Z","quality_controlled":"1","title":"The diverse lives of progenitors of hydrogen-rich core-collapse supernovae: The role of binary interaction","arxiv":1,"article_processing_charge":"No","date_published":"2019-11-20T00:00:00Z","volume":631,"type":"journal_article","publication_identifier":{"eissn":["1432-0746"],"issn":["0004-6361"]},"status":"public","publisher":"EDP Sciences","main_file_link":[{"url":"https://doi.org/10.1051/0004-6361/201935854","open_access":"1"}],"scopus_import":"1","keyword":["Space and Planetary Science","Astronomy and Astrophysics"],"abstract":[{"text":"Hydrogen-rich supernovae, known as Type II (SNe II), are the most common class of explosions observed following the collapse of the core of massive stars. We used analytical estimates and population synthesis simulations to assess the fraction of SNe II progenitors that are expected to have exchanged mass with a companion prior to explosion. We estimate that 1/3 to 1/2 of SN II progenitors have a history of mass exchange with a binary companion before exploding. The dominant binary channels leading to SN II progenitors involve the merger of binary stars. Mergers are expected to produce a diversity of SN II progenitor characteristics, depending on the evolutionary timing and properties of the merger. Alternatively, SN II progenitors from interacting binaries may have accreted mass from their companion, and subsequently been ejected from the binary system after their companion exploded. We show that the overall fraction of SN II progenitors that are predicted to have experienced binary interaction is robust against the main physical uncertainties in our models. However, the relative importance of different binary evolutionary channels is affected by changing physical assumptions. We further discuss ways in which binarity might contribute to the observed diversity of SNe II by considering potential observational signatures arising from each binary channel. For supernovae which have a substantial H-rich envelope at explosion (i.e., excluding Type IIb SNe), a surviving non-compact companion would typically indicate that the supernova progenitor star was in a wide, non-interacting binary. We argue that a significant fraction of even Type II-P SNe are expected to have gained mass from a companion prior to explosion.","lang":"eng"}],"citation":{"short":"E. Zapartas, S.E. de Mink, S. Justham, N. Smith, A. de Koter, M. Renzo, I. Arcavi, R. Farmer, Y.L.L. Götberg, S. Toonen, Astronomy &#38; Astrophysics 631 (2019).","ista":"Zapartas E, de Mink SE, Justham S, Smith N, de Koter A, Renzo M, Arcavi I, Farmer R, Götberg YLL, Toonen S. 2019. The diverse lives of progenitors of hydrogen-rich core-collapse supernovae: The role of binary interaction. Astronomy &#38; Astrophysics. 631, A5.","mla":"Zapartas, Emmanouil, et al. “The Diverse Lives of Progenitors of Hydrogen-Rich Core-Collapse Supernovae: The Role of Binary Interaction.” <i>Astronomy &#38; Astrophysics</i>, vol. 631, A5, EDP Sciences, 2019, doi:<a href=\"https://doi.org/10.1051/0004-6361/201935854\">10.1051/0004-6361/201935854</a>.","chicago":"Zapartas, Emmanouil, Selma E. de Mink, Stephen Justham, Nathan Smith, Alex de Koter, Mathieu Renzo, Iair Arcavi, Rob Farmer, Ylva Louise Linsdotter Götberg, and Silvia Toonen. “The Diverse Lives of Progenitors of Hydrogen-Rich Core-Collapse Supernovae: The Role of Binary Interaction.” <i>Astronomy &#38; Astrophysics</i>. EDP Sciences, 2019. <a href=\"https://doi.org/10.1051/0004-6361/201935854\">https://doi.org/10.1051/0004-6361/201935854</a>.","apa":"Zapartas, E., de Mink, S. E., Justham, S., Smith, N., de Koter, A., Renzo, M., … Toonen, S. (2019). The diverse lives of progenitors of hydrogen-rich core-collapse supernovae: The role of binary interaction. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences. <a href=\"https://doi.org/10.1051/0004-6361/201935854\">https://doi.org/10.1051/0004-6361/201935854</a>","ama":"Zapartas E, de Mink SE, Justham S, et al. The diverse lives of progenitors of hydrogen-rich core-collapse supernovae: The role of binary interaction. <i>Astronomy &#38; Astrophysics</i>. 2019;631. doi:<a href=\"https://doi.org/10.1051/0004-6361/201935854\">10.1051/0004-6361/201935854</a>","ieee":"E. Zapartas <i>et al.</i>, “The diverse lives of progenitors of hydrogen-rich core-collapse supernovae: The role of binary interaction,” <i>Astronomy &#38; Astrophysics</i>, vol. 631. EDP Sciences, 2019."},"article_number":"A5","oa_version":"Published Version"}]