[{"OA_type":"hybrid","_id":"6788","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","year":"2019","publication":"Annales Henri Poincare","article_processing_charge":"Yes (via OA deal)","external_id":{"arxiv":["1807.06781"],"isi":["000487036900008"]},"citation":{"chicago":"Leopold, Nikolai K, and Sören P Petrat. “Mean-Field Dynamics for the Nelson Model with Fermions.” <i>Annales Henri Poincare</i>. Springer Nature, 2019. <a href=\"https://doi.org/10.1007/s00023-019-00828-w\">https://doi.org/10.1007/s00023-019-00828-w</a>.","mla":"Leopold, Nikolai K., and Sören P. Petrat. “Mean-Field Dynamics for the Nelson Model with Fermions.” <i>Annales Henri Poincare</i>, vol. 20, no. 10, Springer Nature, 2019, pp. 3471–3508, doi:<a href=\"https://doi.org/10.1007/s00023-019-00828-w\">10.1007/s00023-019-00828-w</a>.","short":"N.K. Leopold, S.P. Petrat, Annales Henri Poincare 20 (2019) 3471–3508.","ieee":"N. K. Leopold and S. P. Petrat, “Mean-field dynamics for the Nelson model with fermions,” <i>Annales Henri Poincare</i>, vol. 20, no. 10. Springer Nature, pp. 3471–3508, 2019.","apa":"Leopold, N. K., &#38; Petrat, S. P. (2019). Mean-field dynamics for the Nelson model with fermions. <i>Annales Henri Poincare</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00023-019-00828-w\">https://doi.org/10.1007/s00023-019-00828-w</a>","ista":"Leopold NK, Petrat SP. 2019. Mean-field dynamics for the Nelson model with fermions. Annales Henri Poincare. 20(10), 3471–3508.","ama":"Leopold NK, Petrat SP. Mean-field dynamics for the Nelson model with fermions. <i>Annales Henri Poincare</i>. 2019;20(10):3471–3508. doi:<a href=\"https://doi.org/10.1007/s00023-019-00828-w\">10.1007/s00023-019-00828-w</a>"},"abstract":[{"lang":"eng","text":"We consider the Nelson model with ultraviolet cutoff, which describes the interaction between non-relativistic particles and a positive or zero mass quantized scalar field. We take the non-relativistic particles to obey Fermi statistics and discuss the time evolution in a mean-field limit of many fermions. In this case, the limit is known to be also a semiclassical limit. We prove convergence in terms of reduced density matrices of the many-body state to a tensor product of a Slater determinant with semiclassical structure and a coherent state, which evolve according to a fermionic version of the Schrödinger–Klein–Gordon equations."}],"intvolume":"        20","publication_status":"published","author":[{"full_name":"Leopold, Nikolai K","id":"4BC40BEC-F248-11E8-B48F-1D18A9856A87","last_name":"Leopold","orcid":"0000-0002-0495-6822","first_name":"Nikolai K"},{"last_name":"Petrat","full_name":"Petrat, Sören P","id":"40AC02DC-F248-11E8-B48F-1D18A9856A87","first_name":"Sören P","orcid":"0000-0002-9166-5889"}],"issue":"10","fulldoi":"https://doi.org/10.1007/s00023-019-00828-w","oa_version":"Published Version","isi":1,"project":[{"name":"Analysis of quantum many-body systems","grant_number":"694227","call_identifier":"H2020","_id":"25C6DC12-B435-11E9-9278-68D0E5697425"}],"date_published":"2019-10-01T00:00:00Z","quality_controlled":"1","doi":"10.1007/s00023-019-00828-w","title":"Mean-field dynamics for the Nelson model with fermions","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"date_updated":"2026-07-28T13:24:14Z","day":"01","oa":1,"file":[{"file_size":681139,"file_id":"6801","checksum":"b6dbf0d837d809293d449adf77138904","content_type":"application/pdf","relation":"main_file","file_name":"2019_AnnalesHenriPoincare_Leopold.pdf","creator":"dernst","date_updated":"2020-07-14T12:47:40Z","date_created":"2019-08-12T12:05:58Z","access_level":"open_access"}],"department":[{"_id":"RoSe"}],"language":[{"iso":"eng"}],"arxiv":1,"date_created":"2019-08-11T21:59:21Z","page":"3471–3508","volume":20,"acknowledgement":"Open access funding provided by Institute of Science and Technology (IST Austria). We would like to thank Peter Pickl and Robert Seiringer for fruitful discussions, and the anonymous referees for their valuable comments and suggestions. Moreover, we would like to thank Niels Benedikter and László Erdős for helpful remarks about the semiclassical structure and the Schrödinger–Klein–Gordon equations. N. L. gratefully acknowledges financial support by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation program (Grant Agreement No. 694227) and funding for his stay at Princeton University from the project “Effective One-Particle Equations for Correlated Many-Particle-(Coulomb) Systems: Derivation and Properties” (Project No. 318342445) of the German Research Foundation (DFG). S. P. gratefully acknowledges support from the German Academic Exchange Service (DAAD) and the National Science Foundation under Agreement No. DMS-1128155. Moreover, we would like to thank Princeton University and the Institute for Advanced Study for their hospitality. S. P. would additionally like to thank the University of Washington for hospitality.","article_type":"original","ddc":["510"],"month":"10","type":"journal_article","ec_funded":1,"publication_identifier":{"eissn":["1424-0661"],"issn":["1424-0637"]},"publisher":"Springer Nature","has_accepted_license":"1","corr_author":"1","OA_place":"publisher","scopus_import":"1","file_date_updated":"2020-07-14T12:47:40Z"},{"oa":1,"day":"08","date_updated":"2026-07-28T13:04:54Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"title":"Derivation of the time dependent Gross–Pitaevskii equation in two dimensions","scopus_import":"1","file_date_updated":"2020-07-14T12:47:49Z","OA_place":"publisher","corr_author":"1","has_accepted_license":"1","publisher":"Springer Nature","publication_identifier":{"issn":["0010-3616"],"eissn":["1432-0916"]},"ec_funded":1,"ddc":["510"],"type":"journal_article","month":"11","volume":372,"acknowledgement":"OA fund by IST Austria","article_type":"original","page":"1-69","date_created":"2019-11-25T08:08:02Z","language":[{"iso":"eng"}],"department":[{"_id":"RoSe"}],"file":[{"file_id":"7101","file_size":884469,"checksum":"cd283b475dd739e04655315abd46f528","content_type":"application/pdf","relation":"main_file","file_name":"2019_CommMathPhys_Jeblick.pdf","creator":"dernst","date_updated":"2020-07-14T12:47:49Z","access_level":"open_access","date_created":"2019-11-25T08:11:11Z"}],"citation":{"mla":"Jeblick, Maximilian, et al. “Derivation of the Time Dependent Gross–Pitaevskii Equation in Two Dimensions.” <i>Communications in Mathematical Physics</i>, vol. 372, no. 1, Springer Nature, 2019, pp. 1–69, doi:<a href=\"https://doi.org/10.1007/s00220-019-03599-x\">10.1007/s00220-019-03599-x</a>.","chicago":"Jeblick, Maximilian, Nikolai K Leopold, and Peter Pickl. “Derivation of the Time Dependent Gross–Pitaevskii Equation in Two Dimensions.” <i>Communications in Mathematical Physics</i>. Springer Nature, 2019. <a href=\"https://doi.org/10.1007/s00220-019-03599-x\">https://doi.org/10.1007/s00220-019-03599-x</a>.","short":"M. Jeblick, N.K. Leopold, P. Pickl, Communications in Mathematical Physics 372 (2019) 1–69.","ista":"Jeblick M, Leopold NK, Pickl P. 2019. Derivation of the time dependent Gross–Pitaevskii equation in two dimensions. Communications in Mathematical Physics. 372(1), 1–69.","ieee":"M. Jeblick, N. K. Leopold, and P. Pickl, “Derivation of the time dependent Gross–Pitaevskii equation in two dimensions,” <i>Communications in Mathematical Physics</i>, vol. 372, no. 1. Springer Nature, pp. 1–69, 2019.","apa":"Jeblick, M., Leopold, N. K., &#38; Pickl, P. (2019). Derivation of the time dependent Gross–Pitaevskii equation in two dimensions. <i>Communications in Mathematical Physics</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00220-019-03599-x\">https://doi.org/10.1007/s00220-019-03599-x</a>","ama":"Jeblick M, Leopold NK, Pickl P. Derivation of the time dependent Gross–Pitaevskii equation in two dimensions. <i>Communications in Mathematical Physics</i>. 2019;372(1):1-69. doi:<a href=\"https://doi.org/10.1007/s00220-019-03599-x\">10.1007/s00220-019-03599-x</a>"},"external_id":{"isi":["000495193700002"]},"article_processing_charge":"Yes (via OA deal)","publication":"Communications in Mathematical Physics","year":"2019","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","_id":"7100","OA_type":"hybrid","doi":"10.1007/s00220-019-03599-x","quality_controlled":"1","fulldoi":"https://doi.org/10.1007/s00220-019-03599-x","isi":1,"oa_version":"Published Version","date_published":"2019-11-08T00:00:00Z","project":[{"name":"Analysis of quantum many-body systems","grant_number":"694227","call_identifier":"H2020","_id":"25C6DC12-B435-11E9-9278-68D0E5697425"}],"issue":"1","publication_status":"published","author":[{"last_name":"Jeblick","full_name":"Jeblick, Maximilian","first_name":"Maximilian"},{"id":"4BC40BEC-F248-11E8-B48F-1D18A9856A87","full_name":"Leopold, Nikolai K","last_name":"Leopold","orcid":"0000-0002-0495-6822","first_name":"Nikolai K"},{"full_name":"Pickl, Peter","last_name":"Pickl","first_name":"Peter"}],"abstract":[{"lang":"eng","text":"We present microscopic derivations of the defocusing two-dimensional cubic nonlinear Schrödinger equation and the Gross–Pitaevskii equation starting froman interacting N-particle system of bosons. We consider the interaction potential to be given either by Wβ(x)=N−1+2βW(Nβx), for any β>0, or to be given by VN(x)=e2NV(eNx), for some spherical symmetric, nonnegative and compactly supported W,V∈L∞(R2,R). In both cases we prove the convergence of the reduced density corresponding to the exact time evolution to the projector onto the solution of the corresponding nonlinear Schrödinger equation in trace norm. For the latter potential VN we show that it is crucial to take the microscopic structure of the condensate into account in order to obtain the correct dynamics."}],"intvolume":"       372"},{"scopus_import":"1","publication_identifier":{"isbn":["9780128184561"],"issn":["0065-3527"]},"publisher":"Elsevier","date_created":"2019-09-18T08:15:37Z","page":"117-159","pmid":1,"volume":105,"month":"08","type":"book_chapter","department":[{"_id":"FlSc"}],"language":[{"iso":"eng"}],"editor":[{"full_name":"Rey, Félix A.","last_name":"Rey","first_name":"Félix A."}],"day":"27","date_updated":"2026-07-28T13:14:51Z","title":"Structural analysis of pleomorphic and asymmetric viruses using cryo-electron tomography and subtomogram averaging","quality_controlled":"1","doi":"10.1016/bs.aivir.2019.07.008","date_published":"2019-08-27T00:00:00Z","fulldoi":"https://doi.org/10.1016/bs.aivir.2019.07.008","oa_version":"None","isi":1,"intvolume":"       105","abstract":[{"lang":"eng","text":"Describing the protein interactions that form pleomorphic and asymmetric viruses represents a considerable challenge to most structural biology techniques, including X-ray crystallography and single particle cryo-electron microscopy. Obtaining a detailed understanding of these interactions is nevertheless important, considering the number of relevant human pathogens that do not follow strict icosahedral or helical symmetry. Cryo-electron tomography and subtomogram averaging methods provide structural insights into complex biological environments and are well suited to go beyond structures of perfectly symmetric viruses. This chapter discusses recent developments showing that cryo-ET and subtomogram averaging can provide high-resolution insights into hitherto unknown structural features of pleomorphic and asymmetric virus particles. It also describes how these methods have significantly added to our understanding of retrovirus capsid assemblies in immature and mature viruses. Additional examples of irregular viruses and their associated proteins, whose structures have been studied via cryo-ET and subtomogram averaging, further support the versatility of these methods."}],"author":[{"last_name":"Obr","id":"4741CA5A-F248-11E8-B48F-1D18A9856A87","full_name":"Obr, Martin","first_name":"Martin","orcid":"0000-0003-1756-6564"},{"last_name":"Schur","full_name":"Schur, Florian KM","id":"48AD8942-F248-11E8-B48F-1D18A9856A87","first_name":"Florian KM","orcid":"0000-0003-4790-8078"}],"publication_status":"published","article_processing_charge":"No","external_id":{"isi":["000501594500006"],"pmid":["31522703"]},"series_title":"Advances in Virus Research","citation":{"ama":"Obr M, Schur FK. Structural analysis of pleomorphic and asymmetric viruses using cryo-electron tomography and subtomogram averaging. In: Rey FA, ed. <i>Complementary Strategies to Study Virus Structure and Function</i>. Vol 105. Advances in Virus Research. Elsevier; 2019:117-159. doi:<a href=\"https://doi.org/10.1016/bs.aivir.2019.07.008\">10.1016/bs.aivir.2019.07.008</a>","mla":"Obr, Martin, and Florian KM Schur. “Structural Analysis of Pleomorphic and Asymmetric Viruses Using Cryo-Electron Tomography and Subtomogram Averaging.” <i>Complementary Strategies to Study Virus Structure and Function</i>, edited by Félix A. Rey, vol. 105, Elsevier, 2019, pp. 117–59, doi:<a href=\"https://doi.org/10.1016/bs.aivir.2019.07.008\">10.1016/bs.aivir.2019.07.008</a>.","chicago":"Obr, Martin, and Florian KM Schur. “Structural Analysis of Pleomorphic and Asymmetric Viruses Using Cryo-Electron Tomography and Subtomogram Averaging.” In <i>Complementary Strategies to Study Virus Structure and Function</i>, edited by Félix A. Rey, 105:117–59. Advances in Virus Research. Elsevier, 2019. <a href=\"https://doi.org/10.1016/bs.aivir.2019.07.008\">https://doi.org/10.1016/bs.aivir.2019.07.008</a>.","short":"M. Obr, F.K. Schur, in:, F.A. Rey (Ed.), Complementary Strategies to Study Virus Structure and Function, Elsevier, 2019, pp. 117–159.","apa":"Obr, M., &#38; Schur, F. K. (2019). Structural analysis of pleomorphic and asymmetric viruses using cryo-electron tomography and subtomogram averaging. In F. A. Rey (Ed.), <i>Complementary Strategies to Study Virus Structure and Function</i> (Vol. 105, pp. 117–159). Elsevier. <a href=\"https://doi.org/10.1016/bs.aivir.2019.07.008\">https://doi.org/10.1016/bs.aivir.2019.07.008</a>","ista":"Obr M, Schur FK. 2019.Structural analysis of pleomorphic and asymmetric viruses using cryo-electron tomography and subtomogram averaging. In: Complementary Strategies to Study Virus Structure and Function. vol. 105, 117–159.","ieee":"M. Obr and F. K. Schur, “Structural analysis of pleomorphic and asymmetric viruses using cryo-electron tomography and subtomogram averaging,” in <i>Complementary Strategies to Study Virus Structure and Function</i>, vol. 105, F. A. Rey, Ed. Elsevier, 2019, pp. 117–159."},"publication":"Complementary Strategies to Study Virus Structure and Function","year":"2019","OA_type":"closed access","_id":"6890","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public"},{"oa":1,"day":"01","related_material":{"record":[{"id":"8317","relation":"extended_version","status":"public"}]},"date_updated":"2026-07-28T13:08:49Z","title":"Folding polyominoes with holes into a cube","scopus_import":"1","OA_place":"publisher","publisher":"Canadian Conference on Computational Geometry","month":"08","type":"conference","ddc":["500"],"acknowledgement":"This research was performed in part at the 33rd Bellairs Winter Workshop on Computational  Geometry. We thank all other participants for a fruitful atmosphere.","date_created":"2019-11-04T16:46:11Z","page":"164-170","language":[{"iso":"eng"}],"arxiv":1,"main_file_link":[{"url":"https://sites.ualberta.ca/~cccg2019/cccg2019_proceedings.pdf","open_access":"1"}],"department":[{"_id":"HeEd"}],"citation":{"ama":"Aichholzer O, Akitaya HA, Cheung KC, et al. Folding polyominoes with holes into a cube. In: <i>Proceedings of the 31st Canadian Conference on Computational Geometry</i>. Canadian Conference on Computational Geometry; 2019:164-170.","mla":"Aichholzer, Oswin, et al. “Folding Polyominoes with Holes into a Cube.” <i>Proceedings of the 31st Canadian Conference on Computational Geometry</i>, Canadian Conference on Computational Geometry, 2019, pp. 164–70.","chicago":"Aichholzer, Oswin, Hugo A Akitaya, Kenneth C Cheung, Erik D Demaine, Martin L Demaine, Sandor P Fekete, Linda Kleist, et al. “Folding Polyominoes with Holes into a Cube.” In <i>Proceedings of the 31st Canadian Conference on Computational Geometry</i>, 164–70. Canadian Conference on Computational Geometry, 2019.","short":"O. Aichholzer, H.A. Akitaya, K.C. Cheung, E.D. Demaine, M.L. Demaine, S.P. Fekete, L. Kleist, I. Kostitsyna, M. Löffler, Z. Masárová, K. Mundilova, C. Schmidt, in:, Proceedings of the 31st Canadian Conference on Computational Geometry, Canadian Conference on Computational Geometry, 2019, pp. 164–170.","ieee":"O. Aichholzer <i>et al.</i>, “Folding polyominoes with holes into a cube,” in <i>Proceedings of the 31st Canadian Conference on Computational Geometry</i>, Edmonton, Canada, 2019, pp. 164–170.","ista":"Aichholzer O, Akitaya HA, Cheung KC, Demaine ED, Demaine ML, Fekete SP, Kleist L, Kostitsyna I, Löffler M, Masárová Z, Mundilova K, Schmidt C. 2019. Folding polyominoes with holes into a cube. Proceedings of the 31st Canadian Conference on Computational Geometry. CCCG: Canadian Conference in Computational Geometry, 164–170.","apa":"Aichholzer, O., Akitaya, H. A., Cheung, K. C., Demaine, E. D., Demaine, M. L., Fekete, S. P., … Schmidt, C. (2019). Folding polyominoes with holes into a cube. In <i>Proceedings of the 31st Canadian Conference on Computational Geometry</i> (pp. 164–170). Edmonton, Canada: Canadian Conference on Computational Geometry."},"external_id":{"arxiv":["1910.09917"]},"article_processing_charge":"No","publication":"Proceedings of the 31st Canadian Conference on Computational Geometry","year":"2019","status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"6989","conference":{"end_date":"2019-08-10","location":"Edmonton, Canada","start_date":"2019-08-08","name":"CCCG: Canadian Conference in Computational Geometry"},"quality_controlled":"1","date_published":"2019-08-01T00:00:00Z","oa_version":"Published Version","author":[{"full_name":"Aichholzer, Oswin","last_name":"Aichholzer","first_name":"Oswin"},{"first_name":"Hugo A","last_name":"Akitaya","full_name":"Akitaya, Hugo A"},{"full_name":"Cheung, Kenneth C","last_name":"Cheung","first_name":"Kenneth C"},{"first_name":"Erik D","full_name":"Demaine, Erik D","last_name":"Demaine"},{"full_name":"Demaine, Martin L","last_name":"Demaine","first_name":"Martin L"},{"first_name":"Sandor P","full_name":"Fekete, Sandor P","last_name":"Fekete"},{"full_name":"Kleist, Linda","last_name":"Kleist","first_name":"Linda"},{"last_name":"Kostitsyna","full_name":"Kostitsyna, Irina","first_name":"Irina"},{"first_name":"Maarten","full_name":"Löffler, Maarten","last_name":"Löffler"},{"last_name":"Masárová","full_name":"Masárová, Zuzana","id":"45CFE238-F248-11E8-B48F-1D18A9856A87","first_name":"Zuzana","orcid":"0000-0002-6660-1322"},{"first_name":"Klara","full_name":"Mundilova, Klara","last_name":"Mundilova"},{"full_name":"Schmidt, Christiane","last_name":"Schmidt","first_name":"Christiane"}],"publication_status":"published","abstract":[{"lang":"eng","text":"When can a polyomino piece of paper be folded into a unit cube? Prior work studied tree-like polyominoes, but polyominoes with holes remain an intriguing open problem. We present sufficient conditions for a polyomino with hole(s) to fold into a cube, and conditions under which cube folding is impossible. In particular, we show that all but five special simple holes guarantee foldability. "}]},{"article_processing_charge":"No","external_id":{"isi":["000466866000029"]},"citation":{"ama":"Pokusaeva V, Usmanova DR, Putintseva E, et al. An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape. <i>PLoS Genetics</i>. 2019;15(4). doi:<a href=\"https://doi.org/10.1371/journal.pgen.1008079\">10.1371/journal.pgen.1008079</a>","chicago":"Pokusaeva, Victoria, Dinara R. Usmanova, Ekaterina Putintseva, Lorena Espinar, Karen Sarkisyan, Alexander S. Mishin, Natalya S. Bogatyreva, et al. “An Experimental Assay of the Interactions of Amino Acids from Orthologous Sequences Shaping a Complex Fitness Landscape.” <i>PLoS Genetics</i>. Public Library of Science, 2019. <a href=\"https://doi.org/10.1371/journal.pgen.1008079\">https://doi.org/10.1371/journal.pgen.1008079</a>.","mla":"Pokusaeva, Victoria, et al. “An Experimental Assay of the Interactions of Amino Acids from Orthologous Sequences Shaping a Complex Fitness Landscape.” <i>PLoS Genetics</i>, vol. 15, no. 4, e1008079, Public Library of Science, 2019, doi:<a href=\"https://doi.org/10.1371/journal.pgen.1008079\">10.1371/journal.pgen.1008079</a>.","short":"V. Pokusaeva, D.R. Usmanova, E. Putintseva, L. Espinar, K. Sarkisyan, A.S. Mishin, N.S. Bogatyreva, D. Ivankov, A. Akopyan, S. Avvakumov, I.S. Povolotskaya, G.J. Filion, L.B. Carey, F. Kondrashov, PLoS Genetics 15 (2019).","ieee":"V. Pokusaeva <i>et al.</i>, “An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape,” <i>PLoS Genetics</i>, vol. 15, no. 4. Public Library of Science, 2019.","apa":"Pokusaeva, V., Usmanova, D. R., Putintseva, E., Espinar, L., Sarkisyan, K., Mishin, A. S., … Kondrashov, F. (2019). An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape. <i>PLoS Genetics</i>. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pgen.1008079\">https://doi.org/10.1371/journal.pgen.1008079</a>","ista":"Pokusaeva V, Usmanova DR, Putintseva E, Espinar L, Sarkisyan K, Mishin AS, Bogatyreva NS, Ivankov D, Akopyan A, Avvakumov S, Povolotskaya IS, Filion GJ, Carey LB, Kondrashov F. 2019. An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape. PLoS Genetics. 15(4), e1008079."},"article_number":"e1008079","publication":"PLoS Genetics","year":"2019","_id":"6419","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","quality_controlled":"1","doi":"10.1371/journal.pgen.1008079","fulldoi":"https://doi.org/10.1371/journal.pgen.1008079","oa_version":"Published Version","isi":1,"project":[{"grant_number":"665385","name":"International IST Doctoral Program","_id":"2564DBCA-B435-11E9-9278-68D0E5697425","call_identifier":"H2020"}],"date_published":"2019-04-10T00:00:00Z","abstract":[{"text":"Characterizing the fitness landscape, a representation of fitness for a large set of genotypes, is key to understanding how genetic information is interpreted to create functional organisms. Here we determined the evolutionarily-relevant segment of the fitness landscape of His3, a gene coding for an enzyme in the histidine synthesis pathway, focusing on combinations of amino acid states found at orthologous sites of extant species. Just 15% of amino acids found in yeast His3 orthologues were always neutral while the impact on fitness of the remaining 85% depended on the genetic background. Furthermore, at 67% of sites, amino acid replacements were under sign epistasis, having both strongly positive and negative effect in different genetic backgrounds. 46% of sites were under reciprocal sign epistasis. The fitness impact of amino acid replacements was influenced by only a few genetic backgrounds but involved interaction of multiple sites, shaping a rugged fitness landscape in which many of the shortest paths between highly fit genotypes are inaccessible.","lang":"eng"}],"intvolume":"        15","author":[{"full_name":"Pokusaeva, Victoria","id":"3184041C-F248-11E8-B48F-1D18A9856A87","last_name":"Pokusaeva","orcid":"0000-0001-7660-444X","first_name":"Victoria"},{"first_name":"Dinara R.","last_name":"Usmanova","full_name":"Usmanova, Dinara R."},{"first_name":"Ekaterina","last_name":"Putintseva","id":"2EF67C84-F248-11E8-B48F-1D18A9856A87","full_name":"Putintseva, Ekaterina"},{"first_name":"Lorena","full_name":"Espinar, Lorena","last_name":"Espinar"},{"first_name":"Karen","orcid":"0000-0002-5375-6341","last_name":"Sarkisyan","full_name":"Sarkisyan, Karen","id":"39A7BF80-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Alexander S.","full_name":"Mishin, Alexander S.","last_name":"Mishin"},{"first_name":"Natalya S.","full_name":"Bogatyreva, Natalya S.","last_name":"Bogatyreva"},{"orcid":"0000-0002-8224-4118","first_name":"Dmitry","id":"49FF1036-F248-11E8-B48F-1D18A9856A87","full_name":"Ivankov, Dmitry","last_name":"Ivankov"},{"orcid":"0000-0002-2548-617X","first_name":"Arseniy","full_name":"Akopyan, Arseniy","id":"430D2C90-F248-11E8-B48F-1D18A9856A87","last_name":"Akopyan"},{"first_name":"Sergey","orcid":"0000-0002-7840-5062","last_name":"Avvakumov","id":"3827DAC8-F248-11E8-B48F-1D18A9856A87","full_name":"Avvakumov, Sergey"},{"last_name":"Povolotskaya","full_name":"Povolotskaya, Inna S.","first_name":"Inna S."},{"full_name":"Filion, Guillaume J.","last_name":"Filion","first_name":"Guillaume J."},{"last_name":"Carey","full_name":"Carey, Lucas B.","first_name":"Lucas B."},{"orcid":"0000-0001-8243-4694","first_name":"Fyodor","id":"44FDEF62-F248-11E8-B48F-1D18A9856A87","full_name":"Kondrashov, Fyodor","last_name":"Kondrashov"}],"issue":"4","publication_status":"published","oa":1,"related_material":{"record":[{"relation":"research_data","id":"9789","status":"public"},{"id":"9790","relation":"research_data","status":"public"},{"status":"public","id":"9797","relation":"research_data"}]},"day":"10","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"date_updated":"2026-07-28T13:29:02Z","title":"An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape","has_accepted_license":"1","scopus_import":"1","file_date_updated":"2020-07-14T12:47:30Z","ec_funded":1,"publication_identifier":{"eissn":["1553-7404"]},"publisher":"Public Library of Science","date_created":"2019-05-13T07:58:38Z","volume":15,"month":"04","type":"journal_article","ddc":["570"],"file":[{"file_size":3726017,"file_id":"6445","checksum":"cf3889c8a8a16053dacf9c3776cbe217","content_type":"application/pdf","relation":"main_file","file_name":"2019_PLOSGenetics_Pokusaeva.pdf","creator":"dernst","date_updated":"2020-07-14T12:47:30Z","date_created":"2019-05-14T08:26:08Z","access_level":"open_access"}],"department":[{"_id":"FyKo"}],"language":[{"iso":"eng"}]},{"month":"12","ddc":["516"],"type":"journal_article","article_type":"original","volume":62,"acknowledgement":"Open access funding provided by Institute of Science and Technology (IST Austria). This project has received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (Grant Agreement No. 78818 Alpha). It is also partially supported by the DFG Collaborative Research Center TRR 109, ‘Discretization in Geometry and Dynamics’, through Grant No. I02979-N35 of the Austrian Science Fund (FWF).\r\n\r\n","date_created":"2018-12-16T22:59:20Z","page":"865–878","arxiv":1,"language":[{"iso":"eng"}],"department":[{"_id":"HeEd"}],"file":[{"creator":"dernst","file_name":"2018_DiscreteCompGeometry_Edelsbrunner.pdf","access_level":"open_access","date_created":"2019-02-06T10:10:46Z","date_updated":"2020-07-14T12:47:10Z","checksum":"f9d00e166efaccb5a76bbcbb4dcea3b4","file_id":"5932","file_size":599339,"relation":"main_file","content_type":"application/pdf"}],"scopus_import":"1","file_date_updated":"2020-07-14T12:47:10Z","OA_place":"publisher","corr_author":"1","has_accepted_license":"1","publisher":"Springer","publication_identifier":{"issn":["01795376"],"eissn":["14320444"]},"ec_funded":1,"date_updated":"2026-07-28T13:38:08Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"title":"Poisson–Delaunay Mosaics of Order k","oa":1,"day":"01","related_material":{"record":[{"id":"6287","relation":"dissertation_contains","status":"public"}]},"oa_version":"Published Version","fulldoi":"https://doi.org/10.1007/s00454-018-0049-2","isi":1,"date_published":"2019-12-01T00:00:00Z","project":[{"grant_number":"788183","name":"Alpha Shape Theory Extended","call_identifier":"H2020","_id":"266A2E9E-B435-11E9-9278-68D0E5697425"},{"call_identifier":"FWF","_id":"2561EBF4-B435-11E9-9278-68D0E5697425","name":"Persistence and stability of geometric complexes","grant_number":"I02979-N35"}],"publication_status":"published","issue":"4","author":[{"first_name":"Herbert","orcid":"0000-0002-9823-6833","last_name":"Edelsbrunner","full_name":"Edelsbrunner, Herbert","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Anton","orcid":"0000-0002-0659-3201","last_name":"Nikitenko","id":"3E4FF1BA-F248-11E8-B48F-1D18A9856A87","full_name":"Nikitenko, Anton"}],"abstract":[{"text":"The order-k Voronoi tessellation of a locally finite set 𝑋⊆ℝ𝑛 decomposes ℝ𝑛 into convex domains whose points have the same k nearest neighbors in X. Assuming X is a stationary Poisson point process, we give explicit formulas for the expected number and total area of faces of a given dimension per unit volume of space. We also develop a relaxed version of discrete Morse theory and generalize by counting only faces, for which the k nearest points in X are within a given distance threshold.","lang":"eng"}],"intvolume":"        62","doi":"10.1007/s00454-018-0049-2","quality_controlled":"1","year":"2019","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","_id":"5678","OA_type":"hybrid","citation":{"ista":"Edelsbrunner H, Nikitenko A. 2019. Poisson–Delaunay Mosaics of Order k. Discrete and Computational Geometry. 62(4), 865–878.","apa":"Edelsbrunner, H., &#38; Nikitenko, A. (2019). Poisson–Delaunay Mosaics of Order k. <i>Discrete and Computational Geometry</i>. Springer. <a href=\"https://doi.org/10.1007/s00454-018-0049-2\">https://doi.org/10.1007/s00454-018-0049-2</a>","ieee":"H. Edelsbrunner and A. Nikitenko, “Poisson–Delaunay Mosaics of Order k,” <i>Discrete and Computational Geometry</i>, vol. 62, no. 4. Springer, pp. 865–878, 2019.","chicago":"Edelsbrunner, Herbert, and Anton Nikitenko. “Poisson–Delaunay Mosaics of Order K.” <i>Discrete and Computational Geometry</i>. Springer, 2019. <a href=\"https://doi.org/10.1007/s00454-018-0049-2\">https://doi.org/10.1007/s00454-018-0049-2</a>.","mla":"Edelsbrunner, Herbert, and Anton Nikitenko. “Poisson–Delaunay Mosaics of Order K.” <i>Discrete and Computational Geometry</i>, vol. 62, no. 4, Springer, 2019, pp. 865–878, doi:<a href=\"https://doi.org/10.1007/s00454-018-0049-2\">10.1007/s00454-018-0049-2</a>.","short":"H. Edelsbrunner, A. Nikitenko, Discrete and Computational Geometry 62 (2019) 865–878.","ama":"Edelsbrunner H, Nikitenko A. Poisson–Delaunay Mosaics of Order k. <i>Discrete and Computational Geometry</i>. 2019;62(4):865–878. doi:<a href=\"https://doi.org/10.1007/s00454-018-0049-2\">10.1007/s00454-018-0049-2</a>"},"external_id":{"isi":["000494042900008"],"arxiv":["1709.09380"]},"article_processing_charge":"Yes (via OA deal)","publication":"Discrete and Computational Geometry"},{"citation":{"ista":"Chatterjee B, Peri S, Sa M, Singhal N. 2019. A simple and practical concurrent non-blocking unbounded graph with linearizable reachability queries. ACM International Conference Proceeding Series. ICDCN: Conference on Distributed Computing and Networking, 168–177.","apa":"Chatterjee, B., Peri, S., Sa, M., &#38; Singhal, N. (2019). A simple and practical concurrent non-blocking unbounded graph with linearizable reachability queries. In <i>ACM International Conference Proceeding Series</i> (pp. 168–177). Bangalore, India: ACM. <a href=\"https://doi.org/10.1145/3288599.3288617\">https://doi.org/10.1145/3288599.3288617</a>","ieee":"B. Chatterjee, S. Peri, M. Sa, and N. Singhal, “A simple and practical concurrent non-blocking unbounded graph with linearizable reachability queries,” in <i>ACM International Conference Proceeding Series</i>, Bangalore, India, 2019, pp. 168–177.","short":"B. Chatterjee, S. Peri, M. Sa, N. Singhal, in:, ACM International Conference Proceeding Series, ACM, 2019, pp. 168–177.","mla":"Chatterjee, Bapi, et al. “A Simple and Practical Concurrent Non-Blocking Unbounded Graph with Linearizable Reachability Queries.” <i>ACM International Conference Proceeding Series</i>, ACM, 2019, pp. 168–77, doi:<a href=\"https://doi.org/10.1145/3288599.3288617\">10.1145/3288599.3288617</a>.","chicago":"Chatterjee, Bapi, Sathya Peri, Muktikanta Sa, and Nandini Singhal. “A Simple and Practical Concurrent Non-Blocking Unbounded Graph with Linearizable Reachability Queries.” In <i>ACM International Conference Proceeding Series</i>, 168–77. ACM, 2019. <a href=\"https://doi.org/10.1145/3288599.3288617\">https://doi.org/10.1145/3288599.3288617</a>.","ama":"Chatterjee B, Peri S, Sa M, Singhal N. A simple and practical concurrent non-blocking unbounded graph with linearizable reachability queries. In: <i>ACM International Conference Proceeding Series</i>. ACM; 2019:168-177. doi:<a href=\"https://doi.org/10.1145/3288599.3288617\">10.1145/3288599.3288617</a>"},"external_id":{"isi":["000484491600019"],"arxiv":["1809.00896"]},"article_processing_charge":"No","publication":"ACM International Conference Proceeding Series","year":"2019","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","_id":"5947","OA_type":"free access","conference":{"location":"Bangalore, India","name":"ICDCN: Conference on Distributed Computing and Networking","start_date":"2019-01-04","end_date":"2019-01-07"},"doi":"10.1145/3288599.3288617","quality_controlled":"1","fulldoi":"https://doi.org/10.1145/3288599.3288617","oa_version":"Published Version","isi":1,"date_published":"2019-01-04T00:00:00Z","author":[{"last_name":"Chatterjee","id":"3C41A08A-F248-11E8-B48F-1D18A9856A87","full_name":"Chatterjee, Bapi","first_name":"Bapi","orcid":"0000-0002-2742-4028"},{"first_name":"Sathya","last_name":"Peri","full_name":"Peri, Sathya"},{"full_name":"Sa, Muktikanta","last_name":"Sa","first_name":"Muktikanta"},{"full_name":"Singhal, Nandini","last_name":"Singhal","first_name":"Nandini"}],"publication_status":"published","abstract":[{"lang":"eng","text":"Graph algorithms applied in many applications, including social networks, communication networks, VLSI design, graphics, and several others, require dynamic modifications - addition and removal of vertices and/or edges - in the graph. This paper presents a novel concurrent non-blocking algorithm to implement a dynamic unbounded directed graph in a shared-memory machine. The addition and removal operations of vertices and edges are lock-free. For a finite sized graph, the lookup operations are wait-free. Most significant component of the presented algorithm is the reachability query in a concurrent graph. The reachability queries in our algorithm are obstruction-free and thus impose minimal additional synchronization cost over other operations. We prove that each of the data structure operations are linearizable. We extensively evaluate a sample C/C++ implementation of the algorithm through a number of micro-benchmarks. The experimental results show that the proposed algorithm scales well with the number of threads and on an average provides 5 to 7x performance improvement over a concurrent graph implementation using coarse-grained locking."}],"oa":1,"day":"04","date_updated":"2026-07-28T13:34:36Z","title":"A simple and practical concurrent non-blocking unbounded graph with linearizable reachability queries","scopus_import":"1","OA_place":"publisher","corr_author":"1","publisher":"ACM","publication_identifier":{"isbn":["978-1-4503-6094-4 "]},"type":"conference","month":"01","page":"168-177","date_created":"2019-02-10T22:59:17Z","language":[{"iso":"eng"}],"arxiv":1,"main_file_link":[{"url":"https://doi.org/10.1145/3288599.3288617","open_access":"1"}],"department":[{"_id":"DaAl"}]},{"date_published":"2019-02-01T00:00:00Z","fulldoi":"https://doi.org/10.1103/physrevlett.122.040601","isi":1,"oa_version":"Preprint","intvolume":"       122","abstract":[{"lang":"eng","text":"We introduce a simple, exactly solvable strong-randomness renormalization group (RG) model for the many-body localization (MBL) transition in one dimension. Our approach relies on a family of RG flows parametrized by the asymmetry between thermal and localized phases. We identify the physical MBL transition in the limit of maximal asymmetry, reflecting the instability of MBL against rare thermal inclusions. We find a critical point that is localized with power-law distributed thermal inclusions. The typical size of critical inclusions remains finite at the transition, while the average size is logarithmically diverging. We propose a two-parameter scaling theory for the many-body localization transition that falls into the Kosterlitz-Thouless universality class, with the MBL phase corresponding to a stable line of fixed points with multifractal behavior."}],"issue":"4","author":[{"first_name":"Anya","full_name":"Goremykina, Anya","last_name":"Goremykina"},{"first_name":"Romain","last_name":"Vasseur","full_name":"Vasseur, Romain"},{"id":"47809E7E-F248-11E8-B48F-1D18A9856A87","full_name":"Serbyn, Maksym","last_name":"Serbyn","orcid":"0000-0002-2399-5827","first_name":"Maksym"}],"publication_status":"published","doi":"10.1103/physrevlett.122.040601","quality_controlled":"1","year":"2019","OA_type":"green","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","_id":"5906","external_id":{"arxiv":["1807.04285"],"isi":["000456783700001"]},"article_processing_charge":"No","citation":{"ieee":"A. Goremykina, R. Vasseur, and M. Serbyn, “Analytically solvable renormalization group for the many-body localization transition,” <i>Physical Review Letters</i>, vol. 122, no. 4. American Physical Society, 2019.","apa":"Goremykina, A., Vasseur, R., &#38; Serbyn, M. (2019). Analytically solvable renormalization group for the many-body localization transition. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevlett.122.040601\">https://doi.org/10.1103/physrevlett.122.040601</a>","ista":"Goremykina A, Vasseur R, Serbyn M. 2019. Analytically solvable renormalization group for the many-body localization transition. Physical Review Letters. 122(4), 040601.","short":"A. Goremykina, R. Vasseur, M. Serbyn, Physical Review Letters 122 (2019).","mla":"Goremykina, Anya, et al. “Analytically Solvable Renormalization Group for the Many-Body Localization Transition.” <i>Physical Review Letters</i>, vol. 122, no. 4, 040601, American Physical Society, 2019, doi:<a href=\"https://doi.org/10.1103/physrevlett.122.040601\">10.1103/physrevlett.122.040601</a>.","chicago":"Goremykina, Anya, Romain Vasseur, and Maksym Serbyn. “Analytically Solvable Renormalization Group for the Many-Body Localization Transition.” <i>Physical Review Letters</i>. American Physical Society, 2019. <a href=\"https://doi.org/10.1103/physrevlett.122.040601\">https://doi.org/10.1103/physrevlett.122.040601</a>.","ama":"Goremykina A, Vasseur R, Serbyn M. Analytically solvable renormalization group for the many-body localization transition. <i>Physical Review Letters</i>. 2019;122(4). doi:<a href=\"https://doi.org/10.1103/physrevlett.122.040601\">10.1103/physrevlett.122.040601</a>"},"article_number":"040601","publication":"Physical Review Letters","volume":122,"article_type":"original","date_created":"2019-02-01T08:22:28Z","month":"02","type":"journal_article","language":[{"iso":"eng"}],"arxiv":1,"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1807.04285"}],"department":[{"_id":"MaSe"}],"OA_place":"repository","scopus_import":"1","publication_identifier":{"issn":["0031-9007"],"eissn":["1079-7114"]},"publisher":"American Physical Society","date_updated":"2026-07-28T13:42:52Z","title":"Analytically solvable renormalization group for the many-body localization transition","oa":1,"day":"01"},{"author":[{"last_name":"Pokusaeva","id":"3184041C-F248-11E8-B48F-1D18A9856A87","full_name":"Pokusaeva, Victoria","first_name":"Victoria","orcid":"0000-0001-7660-444X"},{"first_name":"Dinara R.","last_name":"Usmanova","full_name":"Usmanova, Dinara R."},{"full_name":"Putintseva, Ekaterina V.","last_name":"Putintseva","first_name":"Ekaterina V."},{"first_name":"Lorena","full_name":"Espinar, Lorena","last_name":"Espinar"},{"id":"39A7BF80-F248-11E8-B48F-1D18A9856A87","full_name":"Sarkisyan, Karen","last_name":"Sarkisyan","orcid":"0000-0002-5375-6341","first_name":"Karen"},{"last_name":"Mishin","full_name":"Mishin, Alexander S.","first_name":"Alexander S."},{"last_name":"Bogatyreva","full_name":"Bogatyreva, Natalya S.","first_name":"Natalya S."},{"orcid":"0000-0002-8224-4118","first_name":"Dmitry","full_name":"Ivankov, Dmitry","id":"49FF1036-F248-11E8-B48F-1D18A9856A87","last_name":"Ivankov"},{"first_name":"Arseniy","orcid":"0000-0002-2548-617X","last_name":"Akopyan","full_name":"Akopyan, Arseniy","id":"430D2C90-F248-11E8-B48F-1D18A9856A87"},{"orcid":"0000-0002-7840-5062","first_name":"Sergey","id":"3827DAC8-F248-11E8-B48F-1D18A9856A87","full_name":"Avvakumov, Sergey","last_name":"Avvakumov"},{"full_name":"Povolotskaya, Inna S.","last_name":"Povolotskaya","first_name":"Inna S."},{"last_name":"Filion","full_name":"Filion, Guillaume J.","first_name":"Guillaume J."},{"first_name":"Lucas B.","full_name":"Carey, Lucas B.","last_name":"Carey"},{"first_name":"Fyodor","orcid":"0000-0001-8243-4694","last_name":"Kondrashov","full_name":"Kondrashov, Fyodor","id":"44FDEF62-F248-11E8-B48F-1D18A9856A87"}],"department":[{"_id":"FyKo"}],"date_published":"2019-04-10T00:00:00Z","fulldoi":"https://doi.org/10.1371/journal.pgen.1008079.s011","oa_version":"Published Version","month":"04","type":"research_data_reference","date_created":"2021-08-06T08:50:15Z","publisher":"Public Library of Science","doi":"10.1371/journal.pgen.1008079.s011","title":"A statistical summary of segment libraries and sequencing results","status":"public","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","_id":"9790","date_updated":"2026-07-28T13:29:02Z","year":"2019","day":"10","related_material":{"record":[{"status":"public","relation":"used_in_publication","id":"6419"}]},"citation":{"ama":"Pokusaeva V, Usmanova DR, Putintseva EV, et al. A statistical summary of segment libraries and sequencing results. 2019. doi:<a href=\"https://doi.org/10.1371/journal.pgen.1008079.s011\">10.1371/journal.pgen.1008079.s011</a>","ista":"Pokusaeva V, Usmanova DR, Putintseva EV, Espinar L, Sarkisyan K, Mishin AS, Bogatyreva NS, Ivankov D, Akopyan A, Avvakumov S, Povolotskaya IS, Filion GJ, Carey LB, Kondrashov F. 2019. A statistical summary of segment libraries and sequencing results, Public Library of Science, <a href=\"https://doi.org/10.1371/journal.pgen.1008079.s011\">10.1371/journal.pgen.1008079.s011</a>.","ieee":"V. Pokusaeva <i>et al.</i>, “A statistical summary of segment libraries and sequencing results.” Public Library of Science, 2019.","apa":"Pokusaeva, V., Usmanova, D. R., Putintseva, E. V., Espinar, L., Sarkisyan, K., Mishin, A. S., … Kondrashov, F. (2019). A statistical summary of segment libraries and sequencing results. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pgen.1008079.s011\">https://doi.org/10.1371/journal.pgen.1008079.s011</a>","mla":"Pokusaeva, Victoria, et al. <i>A Statistical Summary of Segment Libraries and Sequencing Results</i>. Public Library of Science, 2019, doi:<a href=\"https://doi.org/10.1371/journal.pgen.1008079.s011\">10.1371/journal.pgen.1008079.s011</a>.","chicago":"Pokusaeva, Victoria, Dinara R. Usmanova, Ekaterina V. Putintseva, Lorena Espinar, Karen Sarkisyan, Alexander S. Mishin, Natalya S. Bogatyreva, et al. “A Statistical Summary of Segment Libraries and Sequencing Results.” Public Library of Science, 2019. <a href=\"https://doi.org/10.1371/journal.pgen.1008079.s011\">https://doi.org/10.1371/journal.pgen.1008079.s011</a>.","short":"V. Pokusaeva, D.R. Usmanova, E.V. Putintseva, L. Espinar, K. Sarkisyan, A.S. Mishin, N.S. Bogatyreva, D. Ivankov, A. Akopyan, S. Avvakumov, I.S. Povolotskaya, G.J. Filion, L.B. Carey, F. 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Bogatyreva, et al. “Multiple Alignment of His3 Orthologues.” Public Library of Science, 2019. <a href=\"https://doi.org/10.1371/journal.pgen.1008079.s010\">https://doi.org/10.1371/journal.pgen.1008079.s010</a>.","ama":"Pokusaeva V, Usmanova DR, Putintseva EV, et al. Multiple alignment of His3 orthologues. 2019. doi:<a href=\"https://doi.org/10.1371/journal.pgen.1008079.s010\">10.1371/journal.pgen.1008079.s010</a>"},"author":[{"orcid":"0000-0001-7660-444X","first_name":"Victoria","id":"3184041C-F248-11E8-B48F-1D18A9856A87","full_name":"Pokusaeva, Victoria","last_name":"Pokusaeva"},{"last_name":"Usmanova","full_name":"Usmanova, Dinara R.","first_name":"Dinara R."},{"full_name":"Putintseva, Ekaterina V.","last_name":"Putintseva","first_name":"Ekaterina V."},{"first_name":"Lorena","last_name":"Espinar","full_name":"Espinar, Lorena"},{"id":"39A7BF80-F248-11E8-B48F-1D18A9856A87","full_name":"Sarkisyan, Karen","last_name":"Sarkisyan","orcid":"0000-0002-5375-6341","first_name":"Karen"},{"first_name":"Alexander S.","full_name":"Mishin, Alexander S.","last_name":"Mishin"},{"full_name":"Bogatyreva, Natalya S.","last_name":"Bogatyreva","first_name":"Natalya S."},{"first_name":"Dmitry","orcid":"0000-0002-8224-4118","last_name":"Ivankov","id":"49FF1036-F248-11E8-B48F-1D18A9856A87","full_name":"Ivankov, Dmitry"},{"orcid":"0000-0002-2548-617X","first_name":"Arseniy","full_name":"Akopyan, Arseniy","id":"430D2C90-F248-11E8-B48F-1D18A9856A87","last_name":"Akopyan"},{"orcid":"0000-0002-7840-5062","first_name":"Sergey","full_name":"Avvakumov, Sergey","id":"3827DAC8-F248-11E8-B48F-1D18A9856A87","last_name":"Avvakumov"},{"first_name":"Inna S.","full_name":"Povolotskaya, Inna S.","last_name":"Povolotskaya"},{"full_name":"Filion, Guillaume J.","last_name":"Filion","first_name":"Guillaume J."},{"first_name":"Lucas B.","last_name":"Carey","full_name":"Carey, Lucas B."},{"first_name":"Fyodor","orcid":"0000-0001-8243-4694","last_name":"Kondrashov","full_name":"Kondrashov, Fyodor","id":"44FDEF62-F248-11E8-B48F-1D18A9856A87"}],"department":[{"_id":"FyKo"}],"date_created":"2021-08-06T08:38:50Z","fulldoi":"https://doi.org/10.1371/journal.pgen.1008079.s010","date_published":"2019-04-10T00:00:00Z","oa_version":"Published Version","month":"04","type":"research_data_reference","doi":"10.1371/journal.pgen.1008079.s010","publisher":"Public Library of Science"},{"_id":"6179","degree_awarded":"PhD","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","status":"public","year":"2019","citation":{"ama":"Schröder DJ. From Dyson to Pearcey: Universal statistics in random matrix theory. 2019. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:th6179\">10.15479/AT:ISTA:th6179</a>","apa":"Schröder, D. J. (2019). <i>From Dyson to Pearcey: Universal statistics in random matrix theory</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:th6179\">https://doi.org/10.15479/AT:ISTA:th6179</a>","ista":"Schröder DJ. 2019. From Dyson to Pearcey: Universal statistics in random matrix theory. Institute of Science and Technology Austria.","ieee":"D. J. Schröder, “From Dyson to Pearcey: Universal statistics in random matrix theory,” Institute of Science and Technology Austria, 2019.","short":"D.J. Schröder, From Dyson to Pearcey: Universal Statistics in Random Matrix Theory, Institute of Science and Technology Austria, 2019.","chicago":"Schröder, Dominik J. “From Dyson to Pearcey: Universal Statistics in Random Matrix Theory.” Institute of Science and Technology Austria, 2019. <a href=\"https://doi.org/10.15479/AT:ISTA:th6179\">https://doi.org/10.15479/AT:ISTA:th6179</a>.","mla":"Schröder, Dominik J. <i>From Dyson to Pearcey: Universal Statistics in Random Matrix Theory</i>. Institute of Science and Technology Austria, 2019, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:th6179\">10.15479/AT:ISTA:th6179</a>."},"article_processing_charge":"No","author":[{"last_name":"Schröder","full_name":"Schröder, Dominik J","id":"408ED176-F248-11E8-B48F-1D18A9856A87","first_name":"Dominik J","orcid":"0000-0002-2904-1856"}],"publication_status":"published","abstract":[{"lang":"eng","text":"In the first part of this thesis we consider large random matrices with arbitrary expectation and a general slowly decaying correlation among its entries. We prove universality of the local eigenvalue statistics and optimal local laws for the resolvent in the bulk and edge regime. The main novel tool is a systematic diagrammatic control of a multivariate cumulant expansion.\r\nIn the second part we consider Wigner-type matrices and show that at any cusp singularity of the limiting eigenvalue distribution the local eigenvalue statistics are uni- versal and form a Pearcey process. Since the density of states typically exhibits only square root or cubic root cusp singularities, our work complements previous results on the bulk and edge universality and it thus completes the resolution of the Wigner- Dyson-Mehta universality conjecture for the last remaining universality type. Our analysis holds not only for exact cusps, but approximate cusps as well, where an ex- tended Pearcey process emerges. As a main technical ingredient we prove an optimal local law at the cusp, and extend the fast relaxation to equilibrium of the Dyson Brow- nian motion to the cusp regime.\r\nIn the third and final part we explore the entrywise linear statistics of Wigner ma- trices and identify the fluctuations for a large class of test functions with little regularity. This enables us to study the rectangular Young diagram obtained from the interlacing eigenvalues of the random matrix and its minor, and we find that, despite having the same limit, the fluctuations differ from those of the algebraic Young tableaux equipped with the Plancharel measure."}],"fulldoi":"https://doi.org/10.15479/AT:ISTA:th6179","date_published":"2019-03-18T00:00:00Z","oa_version":"Published Version","project":[{"name":"Random matrices, universality and disordered quantum systems","grant_number":"338804","_id":"258DCDE6-B435-11E9-9278-68D0E5697425","call_identifier":"FP7"}],"doi":"10.15479/AT:ISTA:th6179","title":"From Dyson to Pearcey: Universal statistics in random matrix theory","date_updated":"2026-07-29T13:46:20Z","doi_confirm":"1","day":"18","related_material":{"record":[{"relation":"part_of_dissertation","id":"6184","status":"public"},{"id":"6186","relation":"part_of_dissertation","status":"public"},{"status":"public","relation":"part_of_dissertation","id":"6185"},{"status":"public","id":"1012","relation":"part_of_dissertation"},{"status":"public","id":"1144","relation":"part_of_dissertation"},{"id":"6182","relation":"part_of_dissertation","status":"public"}]},"oa":1,"department":[{"_id":"LaEr"},{"_id":"GradSch"}],"language":[{"iso":"eng"}],"file":[{"relation":"source_file","content_type":"application/x-gzip","checksum":"6926f66f28079a81c4937e3764be00fc","file_size":7104482,"file_id":"6180","date_created":"2019-03-28T08:53:52Z","access_level":"closed","date_updated":"2020-07-14T12:47:21Z","creator":"dernst","file_name":"2019_Schroeder_Thesis.tar.gz"},{"file_name":"2019_Schroeder_Thesis.pdf","creator":"dernst","date_updated":"2020-07-14T12:47:21Z","access_level":"open_access","date_created":"2019-03-28T08:53:52Z","file_id":"6181","file_size":4228794,"checksum":"7d0ebb8d1207e89768cdd497a5bf80fb","content_type":"application/pdf","relation":"main_file"}],"type":"dissertation","ddc":["515","519"],"month":"03","page":"375","date_created":"2019-03-28T08:58:59Z","publisher":"Institute of Science and Technology Austria","supervisor":[{"id":"4DBD5372-F248-11E8-B48F-1D18A9856A87","full_name":"Erdös, László","last_name":"Erdös","orcid":"0000-0001-5366-9603","first_name":"László"}],"ec_funded":1,"publication_identifier":{"issn":["2663-337X"]},"corr_author":"1","OA_place":"publisher","file_date_updated":"2020-07-14T12:47:21Z","alternative_title":["ISTA Thesis"],"has_accepted_license":"1"},{"quality_controlled":"1","doi":"10.1017/fms.2019.2","intvolume":"         7","abstract":[{"text":"We consider large random matrices with a general slowly decaying correlation among its entries. We prove universality of the local eigenvalue statistics and optimal local laws for the resolvent away from the spectral edges, generalizing the recent result of Ajanki et al. [‘Stability of the matrix Dyson equation and random matrices with correlations’, Probab. Theory Related Fields 173(1–2) (2019), 293–373] to allow slow correlation decay and arbitrary expectation. The main novel tool is\r\na systematic diagrammatic control of a multivariate cumulant expansion.","lang":"eng"}],"publication_status":"published","author":[{"first_name":"László","orcid":"0000-0001-5366-9603","last_name":"Erdös","id":"4DBD5372-F248-11E8-B48F-1D18A9856A87","full_name":"Erdös, László"},{"orcid":"0000-0002-4821-3297","first_name":"Torben H","id":"3020C786-F248-11E8-B48F-1D18A9856A87","full_name":"Krüger, Torben H","last_name":"Krüger"},{"first_name":"Dominik J","orcid":"0000-0002-2904-1856","last_name":"Schröder","full_name":"Schröder, Dominik J","id":"408ED176-F248-11E8-B48F-1D18A9856A87"}],"isi":1,"fulldoi":"https://doi.org/10.1017/fms.2019.2","oa_version":"Published Version","date_published":"2019-03-26T00:00:00Z","project":[{"grant_number":"338804","name":"Random matrices, universality and disordered quantum systems","call_identifier":"FP7","_id":"258DCDE6-B435-11E9-9278-68D0E5697425"}],"article_number":"e8","publication":"Forum of Mathematics, Sigma","article_processing_charge":"No","external_id":{"isi":["000488847100001"],"arxiv":["1705.10661"]},"citation":{"ama":"Erdös L, Krüger TH, Schröder DJ. Random matrices with slow correlation decay. <i>Forum of Mathematics, Sigma</i>. 2019;7. doi:<a href=\"https://doi.org/10.1017/fms.2019.2\">10.1017/fms.2019.2</a>","ieee":"L. Erdös, T. H. Krüger, and D. J. Schröder, “Random matrices with slow correlation decay,” <i>Forum of Mathematics, Sigma</i>, vol. 7. Cambridge University Press, 2019.","ista":"Erdös L, Krüger TH, Schröder DJ. 2019. Random matrices with slow correlation decay. Forum of Mathematics, Sigma. 7, e8.","apa":"Erdös, L., Krüger, T. H., &#38; Schröder, D. J. (2019). Random matrices with slow correlation decay. <i>Forum of Mathematics, Sigma</i>. Cambridge University Press. <a href=\"https://doi.org/10.1017/fms.2019.2\">https://doi.org/10.1017/fms.2019.2</a>","short":"L. Erdös, T.H. Krüger, D.J. Schröder, Forum of Mathematics, Sigma 7 (2019).","mla":"Erdös, László, et al. “Random Matrices with Slow Correlation Decay.” <i>Forum of Mathematics, Sigma</i>, vol. 7, e8, Cambridge University Press, 2019, doi:<a href=\"https://doi.org/10.1017/fms.2019.2\">10.1017/fms.2019.2</a>.","chicago":"Erdös, László, Torben H Krüger, and Dominik J Schröder. “Random Matrices with Slow Correlation Decay.” <i>Forum of Mathematics, Sigma</i>. Cambridge University Press, 2019. <a href=\"https://doi.org/10.1017/fms.2019.2\">https://doi.org/10.1017/fms.2019.2</a>."},"_id":"6182","status":"public","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","year":"2019","ec_funded":1,"publication_identifier":{"eissn":["2050-5094"]},"publisher":"Cambridge University Press","has_accepted_license":"1","corr_author":"1","scopus_import":"1","file_date_updated":"2020-07-14T12:47:22Z","file":[{"checksum":"933a472568221c73b2c3ce8c87bf6d15","file_size":1520344,"file_id":"6883","relation":"main_file","content_type":"application/pdf","creator":"dernst","file_name":"2019_Forum_Erdoes.pdf","access_level":"open_access","date_created":"2019-09-17T14:24:13Z","date_updated":"2020-07-14T12:47:22Z"}],"department":[{"_id":"LaEr"}],"language":[{"iso":"eng"}],"arxiv":1,"date_created":"2019-03-28T09:05:23Z","volume":7,"article_type":"original","type":"journal_article","ddc":["510"],"month":"03","related_material":{"record":[{"status":"public","id":"6179","relation":"dissertation_contains"}]},"day":"26","oa":1,"title":"Random matrices with slow correlation decay","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"date_updated":"2026-07-29T13:46:19Z"},{"publication_identifier":{"eissn":["2578-5885"],"issn":["2578-5893"]},"ec_funded":1,"publisher":"MSP","scopus_import":"1","language":[{"iso":"eng"}],"arxiv":1,"department":[{"_id":"LaEr"}],"main_file_link":[{"url":"https://arxiv.org/abs/1811.04055","open_access":"1"}],"volume":1,"article_type":"original","date_created":"2019-03-28T10:21:17Z","page":"615–707","type":"journal_article","month":"10","related_material":{"record":[{"id":"6179","relation":"dissertation_contains","status":"public"}]},"day":"12","oa":1,"title":"Cusp universality for random matrices, II: The real symmetric case","date_updated":"2026-07-29T13:46:19Z","doi":"10.2140/paa.2019.1.615","quality_controlled":"1","abstract":[{"text":"We prove that the local eigenvalue statistics of real symmetric Wigner-type\r\nmatrices near the cusp points of the eigenvalue density are universal. Together\r\nwith the companion paper [arXiv:1809.03971], which proves the same result for\r\nthe complex Hermitian symmetry class, this completes the last remaining case of\r\nthe Wigner-Dyson-Mehta universality conjecture after bulk and edge\r\nuniversalities have been established in the last years. We extend the recent\r\nDyson Brownian motion analysis at the edge [arXiv:1712.03881] to the cusp\r\nregime using the optimal local law from [arXiv:1809.03971] and the accurate\r\nlocal shape analysis of the density from [arXiv:1506.05095, arXiv:1804.07752].\r\nWe also present a PDE-based method to improve the estimate on eigenvalue\r\nrigidity via the maximum principle of the heat flow related to the Dyson\r\nBrownian motion.","lang":"eng"}],"intvolume":"         1","issue":"4","publication_status":"published","author":[{"id":"42198EFA-F248-11E8-B48F-1D18A9856A87","full_name":"Cipolloni, Giorgio","last_name":"Cipolloni","orcid":"0000-0002-4901-7992","first_name":"Giorgio"},{"full_name":"Erdös, László","id":"4DBD5372-F248-11E8-B48F-1D18A9856A87","last_name":"Erdös","orcid":"0000-0001-5366-9603","first_name":"László"},{"id":"3020C786-F248-11E8-B48F-1D18A9856A87","full_name":"Krüger, Torben H","last_name":"Krüger","orcid":"0000-0002-4821-3297","first_name":"Torben H"},{"last_name":"Schröder","full_name":"Schröder, Dominik J","id":"408ED176-F248-11E8-B48F-1D18A9856A87","first_name":"Dominik J","orcid":"0000-0002-2904-1856"}],"fulldoi":"https://doi.org/10.2140/paa.2019.1.615","project":[{"grant_number":"338804","name":"Random matrices, universality and disordered quantum systems","_id":"258DCDE6-B435-11E9-9278-68D0E5697425","call_identifier":"FP7"},{"grant_number":"665385","name":"International IST Doctoral Program","call_identifier":"H2020","_id":"2564DBCA-B435-11E9-9278-68D0E5697425"}],"date_published":"2019-10-12T00:00:00Z","oa_version":"Preprint","publication":"Pure and Applied Analysis ","external_id":{"arxiv":["1811.04055"]},"article_processing_charge":"No","citation":{"ama":"Cipolloni G, Erdös L, Krüger TH, Schröder DJ. Cusp universality for random matrices, II: The real symmetric case. <i>Pure and Applied Analysis </i>. 2019;1(4):615–707. doi:<a href=\"https://doi.org/10.2140/paa.2019.1.615\">10.2140/paa.2019.1.615</a>","chicago":"Cipolloni, Giorgio, László Erdös, Torben H Krüger, and Dominik J Schröder. “Cusp Universality for Random Matrices, II: The Real Symmetric Case.” <i>Pure and Applied Analysis </i>. MSP, 2019. <a href=\"https://doi.org/10.2140/paa.2019.1.615\">https://doi.org/10.2140/paa.2019.1.615</a>.","mla":"Cipolloni, Giorgio, et al. “Cusp Universality for Random Matrices, II: The Real Symmetric Case.” <i>Pure and Applied Analysis </i>, vol. 1, no. 4, MSP, 2019, pp. 615–707, doi:<a href=\"https://doi.org/10.2140/paa.2019.1.615\">10.2140/paa.2019.1.615</a>.","short":"G. Cipolloni, L. Erdös, T.H. Krüger, D.J. Schröder, Pure and Applied Analysis  1 (2019) 615–707.","ista":"Cipolloni G, Erdös L, Krüger TH, Schröder DJ. 2019. Cusp universality for random matrices, II: The real symmetric case. Pure and Applied Analysis . 1(4), 615–707.","ieee":"G. Cipolloni, L. Erdös, T. H. Krüger, and D. J. Schröder, “Cusp universality for random matrices, II: The real symmetric case,” <i>Pure and Applied Analysis </i>, vol. 1, no. 4. MSP, pp. 615–707, 2019.","apa":"Cipolloni, G., Erdös, L., Krüger, T. H., &#38; Schröder, D. J. (2019). Cusp universality for random matrices, II: The real symmetric case. <i>Pure and Applied Analysis </i>. MSP. <a href=\"https://doi.org/10.2140/paa.2019.1.615\">https://doi.org/10.2140/paa.2019.1.615</a>"},"status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"6186","year":"2019"},{"author":[{"first_name":"Phuong","last_name":"Bui Thi Mai","full_name":"Bui Thi Mai, Phuong","id":"3EC6EE64-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Lampert","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87","full_name":"Lampert, Christoph","first_name":"Christoph","orcid":"0000-0001-8622-7887"}],"publication_status":"published","abstract":[{"lang":"eng","text":"Multi-exit architectures, in which a stack of processing layers is interleaved with early output layers, allow the processing of a test example to stop early and thus save computation time and/or energy.  In this work, we propose a new training procedure for multi-exit architectures based on the principle of knowledge distillation. The method encourage searly exits to mimic later, more accurate exits, by matching their output probabilities.\r\nExperiments  on  CIFAR100  and  ImageNet  show  that distillation-based training significantly improves the accuracy of early exits while maintaining state-of-the-art accuracy  for  late  ones.   The  method  is  particularly  beneficial when  training  data  is  limited  and  it  allows  a  straightforward extension to semi-supervised learning,i.e. making use of unlabeled data at training time. Moreover, it takes only afew lines to implement and incurs almost no computational overhead at training time, and none at all at test time."}],"fulldoi":"https://doi.org/10.1109/ICCV.2019.00144","isi":1,"date_published":"2019-10-01T00:00:00Z","oa_version":"Submitted Version","project":[{"grant_number":"308036","name":"Lifelong Learning of Visual Scene Understanding","_id":"2532554C-B435-11E9-9278-68D0E5697425","call_identifier":"FP7"}],"conference":{"end_date":"2019-11-02","name":"ICCV: International Conference on Computer Vision","start_date":"2019-10-27","location":"Seoul, Korea"},"doi":"10.1109/ICCV.2019.00144","quality_controlled":"1","status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"7479","year":"2019","publication":"IEEE International Conference on Computer Vision","citation":{"ama":"Phuong M, Lampert C. Distillation-based training for multi-exit architectures. In: <i>IEEE International Conference on Computer Vision</i>. Vol 2019-October. IEEE; 2019:1355-1364. doi:<a href=\"https://doi.org/10.1109/ICCV.2019.00144\">10.1109/ICCV.2019.00144</a>","short":"M. Phuong, C. Lampert, in:, IEEE International Conference on Computer Vision, IEEE, 2019, pp. 1355–1364.","chicago":"Phuong, Mary, and Christoph Lampert. “Distillation-Based Training for Multi-Exit Architectures.” In <i>IEEE International Conference on Computer Vision</i>, 2019–October:1355–64. IEEE, 2019. <a href=\"https://doi.org/10.1109/ICCV.2019.00144\">https://doi.org/10.1109/ICCV.2019.00144</a>.","mla":"Phuong, Mary, and Christoph Lampert. “Distillation-Based Training for Multi-Exit Architectures.” <i>IEEE International Conference on Computer Vision</i>, vol. 2019–October, IEEE, 2019, pp. 1355–64, doi:<a href=\"https://doi.org/10.1109/ICCV.2019.00144\">10.1109/ICCV.2019.00144</a>.","ieee":"M. Phuong and C. Lampert, “Distillation-based training for multi-exit architectures,” in <i>IEEE International Conference on Computer Vision</i>, Seoul, Korea, 2019, vol. 2019–October, pp. 1355–1364.","apa":"Phuong, M., &#38; Lampert, C. (2019). Distillation-based training for multi-exit architectures. In <i>IEEE International Conference on Computer Vision</i> (Vol. 2019–October, pp. 1355–1364). Seoul, Korea: IEEE. <a href=\"https://doi.org/10.1109/ICCV.2019.00144\">https://doi.org/10.1109/ICCV.2019.00144</a>","ista":"Phuong M, Lampert C. 2019. Distillation-based training for multi-exit architectures. IEEE International Conference on Computer Vision. ICCV: International Conference on Computer Vision vol. 2019–October, 1355–1364."},"external_id":{"isi":["000531438101047"]},"article_processing_charge":"No","language":[{"iso":"eng"}],"department":[{"_id":"ChLa"}],"file":[{"file_id":"7480","file_size":735768,"checksum":"7b77fb5c2d27c4c37a7612ba46a66117","content_type":"application/pdf","relation":"main_file","file_name":"main.pdf","creator":"bphuong","date_updated":"2020-07-14T12:47:59Z","date_created":"2020-02-11T09:06:39Z","access_level":"open_access"}],"type":"conference","month":"10","ddc":["000"],"volume":"2019-October","date_created":"2020-02-11T09:06:57Z","page":"1355-1364","publisher":"IEEE","publication_identifier":{"isbn":["9781728148038"],"issn":["1550-5499"]},"ec_funded":1,"scopus_import":"1","file_date_updated":"2020-07-14T12:47:59Z","has_accepted_license":"1","title":"Distillation-based training for multi-exit architectures","date_updated":"2026-07-30T05:33:51Z","day":"01","related_material":{"record":[{"status":"public","relation":"dissertation_contains","id":"9418"}]},"oa":1},{"OA_place":"repository","scopus_import":"1","publication_identifier":{"eissn":["2397-334X"]},"publisher":"Springer Nature","extern":"1","date_created":"2026-07-27T12:30:23Z","page":"1309-1320","article_type":"original","volume":3,"month":"09","type":"journal_article","main_file_link":[{"open_access":"1","url":"https://www.osti.gov/servlets/purl/1569379"}],"language":[{"iso":"eng"}],"oa":1,"day":"01","date_updated":"2026-07-30T06:31:13Z","das_tickbox":"1","title":"A meta-analysis of 1,119 manipulative experiments on terrestrial carbon-cycling responses to global change","quality_controlled":"1","doi":"10.1038/s41559-019-0958-3","fulldoi":"https://doi.org/10.1038/s41559-019-0958-3","date_published":"2019-09-01T00:00:00Z","oa_version":"Submitted Version","abstract":[{"text":"Direct quantification of terrestrial biosphere responses to global change is crucial for projections of future climate change in Earth system models. Here, we synthesized ecosystem carbon-cycling data from 1,119 experiments performed over the past four decades concerning changes in temperature, precipitation, CO2 and nitrogen across major terrestrial vegetation types of the world. Most experiments manipulated single rather than multiple global change drivers in temperate ecosystems of the USA, Europe and China. The magnitudes of warming and elevated CO2 treatments were consistent with the ranges of future projections, whereas those of precipitation changes and nitrogen inputs often exceeded the projected ranges. Increases in global change drivers consistently accelerated, but decreased precipitation slowed down carbon-cycle processes. Nonlinear (including synergistic and antagonistic) effects among global change drivers were rare. Belowground carbon allocation responded negatively to increased precipitation and nitrogen addition and positively to decreased precipitation and elevated CO2. The sensitivities of carbon variables to multiple global change drivers depended on the background climate and ecosystem condition, suggesting that Earth system models should be evaluated using site-specific conditions for best uses of this large dataset. Together, this synthesis underscores an urgent need to explore the interactions among multiple global change drivers in underrepresented regions such as semi-arid ecosystems, forests in the tropics and subtropics, and Arctic tundra when forecasting future terrestrial carbon-climate feedback.","lang":"eng"}],"intvolume":"         3","issue":"9","author":[{"full_name":"Song, Jian","last_name":"Song","first_name":"Jian"},{"last_name":"Wan","full_name":"Wan, Shiqiang","first_name":"Shiqiang"},{"full_name":"Piao, Shilong","last_name":"Piao","first_name":"Shilong"},{"full_name":"Knapp, Alan K.","last_name":"Knapp","first_name":"Alan K."},{"full_name":"Classen, Aimée T.","last_name":"Classen","first_name":"Aimée T."},{"first_name":"Sara","full_name":"Vicca, Sara","last_name":"Vicca"},{"last_name":"Ciais","full_name":"Ciais, Philippe","first_name":"Philippe"},{"full_name":"Hovenden, Mark J.","last_name":"Hovenden","first_name":"Mark J."},{"first_name":"Sebastian","last_name":"Leuzinger","full_name":"Leuzinger, Sebastian"},{"first_name":"Claus","last_name":"Beier","full_name":"Beier, Claus"},{"last_name":"Kardol","full_name":"Kardol, Paul","first_name":"Paul"},{"first_name":"Jianyang","last_name":"Xia","full_name":"Xia, Jianyang"},{"full_name":"Liu, Qiang","last_name":"Liu","first_name":"Qiang"},{"full_name":"Ru, Jingyi","last_name":"Ru","first_name":"Jingyi"},{"full_name":"Zhou, Zhenxing","last_name":"Zhou","first_name":"Zhenxing"},{"last_name":"Luo","full_name":"Luo, Yiqi","first_name":"Yiqi"},{"first_name":"Dali","full_name":"Guo, Dali","last_name":"Guo"},{"last_name":"Adam Langley","full_name":"Adam Langley, J.","first_name":"J."},{"first_name":"Jakob","last_name":"Zscheischler","full_name":"Zscheischler, Jakob"},{"first_name":"Jeffrey S.","full_name":"Dukes, Jeffrey S.","last_name":"Dukes"},{"full_name":"Tang, Jianwu","last_name":"Tang","first_name":"Jianwu"},{"first_name":"Jiquan","full_name":"Chen, Jiquan","last_name":"Chen"},{"first_name":"Kirsten S.","last_name":"Hofmockel","full_name":"Hofmockel, Kirsten S."},{"first_name":"Lara M.","full_name":"Kueppers, Lara M.","last_name":"Kueppers"},{"first_name":"Lindsey","last_name":"Rustad","full_name":"Rustad, Lindsey"},{"first_name":"Lingli","full_name":"Liu, Lingli","last_name":"Liu"},{"full_name":"Smith, Melinda D.","last_name":"Smith","first_name":"Melinda D."},{"last_name":"Templer","full_name":"Templer, Pamela H.","first_name":"Pamela H."},{"first_name":"R.","last_name":"Quinn Thomas","full_name":"Quinn Thomas, R."},{"last_name":"Norby","full_name":"Norby, Richard J.","first_name":"Richard J."},{"full_name":"Phillips, Richard P.","last_name":"Phillips","first_name":"Richard P."},{"first_name":"Shuli","full_name":"Niu, Shuli","last_name":"Niu"},{"first_name":"Simone","id":"cf8e546b-a9b0-11f0-a43b-aa89ed1b56d6","full_name":"Fatichi, Simone","last_name":"Fatichi"},{"first_name":"Yingping","full_name":"Wang, Yingping","last_name":"Wang"},{"first_name":"Pengshuai","full_name":"Shao, Pengshuai","last_name":"Shao"},{"first_name":"Hongyan","full_name":"Han, Hongyan","last_name":"Han"},{"first_name":"Dandan","last_name":"Wang","full_name":"Wang, Dandan"},{"first_name":"Lingjie","last_name":"Lei","full_name":"Lei, Lingjie"},{"full_name":"Wang, Jiali","last_name":"Wang","first_name":"Jiali"},{"last_name":"Li","full_name":"Li, Xiaona","first_name":"Xiaona"},{"first_name":"Qian","last_name":"Zhang","full_name":"Zhang, Qian"},{"first_name":"Xiaoming","full_name":"Li, Xiaoming","last_name":"Li"},{"last_name":"Su","full_name":"Su, Fanglong","first_name":"Fanglong"},{"first_name":"Bin","last_name":"Liu","full_name":"Liu, Bin"},{"first_name":"Fan","last_name":"Yang","full_name":"Yang, Fan"},{"first_name":"Gaigai","full_name":"Ma, Gaigai","last_name":"Ma"},{"full_name":"Li, Guoyong","last_name":"Li","first_name":"Guoyong"},{"last_name":"Liu","full_name":"Liu, Yanchun","first_name":"Yanchun"},{"full_name":"Liu, Yinzhan","last_name":"Liu","first_name":"Yinzhan"},{"first_name":"Zhongling","full_name":"Yang, Zhongling","last_name":"Yang"},{"first_name":"Kesheng","full_name":"Zhang, Kesheng","last_name":"Zhang"},{"first_name":"Yuan","last_name":"Miao","full_name":"Miao, Yuan"},{"first_name":"Mengjun","last_name":"Hu","full_name":"Hu, Mengjun"},{"first_name":"Chuang","full_name":"Yan, Chuang","last_name":"Yan"},{"last_name":"Zhang","full_name":"Zhang, Ang","first_name":"Ang"},{"first_name":"Mingxing","full_name":"Zhong, Mingxing","last_name":"Zhong"},{"full_name":"Hui, Yan","last_name":"Hui","first_name":"Yan"},{"full_name":"Li, Ying","last_name":"Li","first_name":"Ying"},{"first_name":"Mengmei","full_name":"Zheng, Mengmei","last_name":"Zheng"}],"publication_status":"published","article_processing_charge":"No","citation":{"ama":"Song J, Wan S, Piao S, et al. A meta-analysis of 1,119 manipulative experiments on terrestrial carbon-cycling responses to global change. <i>Nature Ecology &#38; Evolution</i>. 2019;3(9):1309-1320. doi:<a href=\"https://doi.org/10.1038/s41559-019-0958-3\">10.1038/s41559-019-0958-3</a>","ieee":"J. Song <i>et al.</i>, “A meta-analysis of 1,119 manipulative experiments on terrestrial carbon-cycling responses to global change,” <i>Nature Ecology &#38; Evolution</i>, vol. 3, no. 9. Springer Nature, pp. 1309–1320, 2019.","ista":"Song J, Wan S, Piao S, Knapp AK, Classen AT, Vicca S, Ciais P, Hovenden MJ, Leuzinger S, Beier C, Kardol P, Xia J, Liu Q, Ru J, Zhou Z, Luo Y, Guo D, Adam Langley J, Zscheischler J, Dukes JS, Tang J, Chen J, Hofmockel KS, Kueppers LM, Rustad L, Liu L, Smith MD, Templer PH, Quinn Thomas R, Norby RJ, Phillips RP, Niu S, Fatichi S, Wang Y, Shao P, Han H, Wang D, Lei L, Wang J, Li X, Zhang Q, Li X, Su F, Liu B, Yang F, Ma G, Li G, Liu Y, Liu Y, Yang Z, Zhang K, Miao Y, Hu M, Yan C, Zhang A, Zhong M, Hui Y, Li Y, Zheng M. 2019. A meta-analysis of 1,119 manipulative experiments on terrestrial carbon-cycling responses to global change. Nature Ecology &#38; Evolution. 3(9), 1309–1320.","apa":"Song, J., Wan, S., Piao, S., Knapp, A. K., Classen, A. T., Vicca, S., … Zheng, M. (2019). A meta-analysis of 1,119 manipulative experiments on terrestrial carbon-cycling responses to global change. <i>Nature Ecology &#38; Evolution</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41559-019-0958-3\">https://doi.org/10.1038/s41559-019-0958-3</a>","chicago":"Song, Jian, Shiqiang Wan, Shilong Piao, Alan K. Knapp, Aimée T. Classen, Sara Vicca, Philippe Ciais, et al. “A Meta-Analysis of 1,119 Manipulative Experiments on Terrestrial Carbon-Cycling Responses to Global Change.” <i>Nature Ecology &#38; Evolution</i>. Springer Nature, 2019. <a href=\"https://doi.org/10.1038/s41559-019-0958-3\">https://doi.org/10.1038/s41559-019-0958-3</a>.","mla":"Song, Jian, et al. “A Meta-Analysis of 1,119 Manipulative Experiments on Terrestrial Carbon-Cycling Responses to Global Change.” <i>Nature Ecology &#38; Evolution</i>, vol. 3, no. 9, Springer Nature, 2019, pp. 1309–20, doi:<a href=\"https://doi.org/10.1038/s41559-019-0958-3\">10.1038/s41559-019-0958-3</a>.","short":"J. Song, S. Wan, S. Piao, A.K. Knapp, A.T. Classen, S. Vicca, P. Ciais, M.J. Hovenden, S. Leuzinger, C. Beier, P. Kardol, J. Xia, Q. Liu, J. Ru, Z. Zhou, Y. Luo, D. Guo, J. Adam Langley, J. Zscheischler, J.S. Dukes, J. Tang, J. Chen, K.S. Hofmockel, L.M. Kueppers, L. Rustad, L. Liu, M.D. Smith, P.H. Templer, R. Quinn Thomas, R.J. Norby, R.P. Phillips, S. Niu, S. Fatichi, Y. Wang, P. Shao, H. Han, D. Wang, L. Lei, J. Wang, X. Li, Q. Zhang, X. Li, F. Su, B. Liu, F. Yang, G. Ma, G. Li, Y. Liu, Y. Liu, Z. Yang, K. Zhang, Y. Miao, M. Hu, C. Yan, A. Zhang, M. Zhong, Y. Hui, Y. Li, M. Zheng, Nature Ecology &#38; Evolution 3 (2019) 1309–1320."},"publication":"Nature Ecology & Evolution","year":"2019","OA_type":"green","_id":"22454","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public"},{"oa":1,"day":"27","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"date_updated":"2026-07-30T06:58:18Z","das_tickbox":"1","title":"Assessing the vulnerability of aquatic macroinvertebrates to climate warming in a mountainous watershed: Supplementing presence-only data with species traits","has_accepted_license":"1","OA_place":"publisher","scopus_import":"1","publication_identifier":{"eissn":["2073-4441"]},"publisher":"MDPI","volume":11,"article_type":"original","date_created":"2026-07-27T12:30:23Z","extern":"1","type":"journal_article","ddc":["550"],"month":"03","language":[{"iso":"eng"}],"main_file_link":[{"url":"https://doi.org/10.3390/w11040636","open_access":"1"}],"article_processing_charge":"No","citation":{"short":"A.-L. Besacier Monbertrand, P. Timoner, K. Rahman, P. Burlando, S. Fatichi, Y. Gonseth, F. Moser, E. Castella, A. Lehmann, Water 11 (2019).","chicago":"Besacier Monbertrand, Anne-Laure, Pablo Timoner, Kazi Rahman, Paolo Burlando, Simone Fatichi, Yves Gonseth, Frédéric Moser, Emmanuel Castella, and Anthony Lehmann. “Assessing the Vulnerability of Aquatic Macroinvertebrates to Climate Warming in a Mountainous Watershed: Supplementing Presence-Only Data with Species Traits.” <i>Water</i>. MDPI, 2019. <a href=\"https://doi.org/10.3390/w11040636\">https://doi.org/10.3390/w11040636</a>.","mla":"Besacier Monbertrand, Anne-Laure, et al. “Assessing the Vulnerability of Aquatic Macroinvertebrates to Climate Warming in a Mountainous Watershed: Supplementing Presence-Only Data with Species Traits.” <i>Water</i>, vol. 11, no. 4, 636, MDPI, 2019, doi:<a href=\"https://doi.org/10.3390/w11040636\">10.3390/w11040636</a>.","ieee":"A.-L. Besacier Monbertrand <i>et al.</i>, “Assessing the vulnerability of aquatic macroinvertebrates to climate warming in a mountainous watershed: Supplementing presence-only data with species traits,” <i>Water</i>, vol. 11, no. 4. MDPI, 2019.","apa":"Besacier Monbertrand, A.-L., Timoner, P., Rahman, K., Burlando, P., Fatichi, S., Gonseth, Y., … Lehmann, A. (2019). Assessing the vulnerability of aquatic macroinvertebrates to climate warming in a mountainous watershed: Supplementing presence-only data with species traits. <i>Water</i>. MDPI. <a href=\"https://doi.org/10.3390/w11040636\">https://doi.org/10.3390/w11040636</a>","ista":"Besacier Monbertrand A-L, Timoner P, Rahman K, Burlando P, Fatichi S, Gonseth Y, Moser F, Castella E, Lehmann A. 2019. Assessing the vulnerability of aquatic macroinvertebrates to climate warming in a mountainous watershed: Supplementing presence-only data with species traits. Water. 11(4), 636.","ama":"Besacier Monbertrand A-L, Timoner P, Rahman K, et al. Assessing the vulnerability of aquatic macroinvertebrates to climate warming in a mountainous watershed: Supplementing presence-only data with species traits. <i>Water</i>. 2019;11(4). doi:<a href=\"https://doi.org/10.3390/w11040636\">10.3390/w11040636</a>"},"article_number":"636","publication":"Water","year":"2019","keyword":["Species Distribution Models","ensemble forecasting","Swiss Alps","climate change","red lists"],"OA_type":"hybrid","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","_id":"22442","doi":"10.3390/w11040636","quality_controlled":"1","fulldoi":"https://doi.org/10.3390/w11040636","date_published":"2019-03-27T00:00:00Z","oa_version":"Published Version","intvolume":"        11","abstract":[{"lang":"eng","text":"Mountainous running water ecosystems are vulnerable to climate change with major changes coming from warming temperatures. Species distribution will be affected and some species are anticipated to be winners (increasing their range) or losers (at risk of extinction). Climate change vulnerability is seldom integrated when assessing threat status for lists of species at risk (Red Lists), even though this might appear an important addition in the current context. The main objective of our study was to assess the potential vulnerability of Ephemeroptera (E), Plecoptera (P) and Trichoptera (T) species to global warming in a Swiss mountainous region by supplementing Species Distribution Models (SDMs) with a trait-based approach, using available historical occurrence and environmental data and to compare our outcomes with the Swiss National Red List. First, we used nine different modelling techniques and topographic, land use, climatic and hydrological variables as predictors of EPT species distribution. The shape of the response curves of the species for the environmental variables in the nine modelling techniques, together with three biological and ecological traits were used to assess the potential vulnerability of each species to climate change. The joint use of SDMs and trait approach appeared complementary and even though discrepancies were highlighted between SDMs and trait analyses, groups of potential “winners” and “losers” were raised out. Plecoptera appeared as the most vulnerable group to global warming. Divergences between current threat status of species and our results pointed out the need to integrate climate change vulnerability in Red List assessments."}],"author":[{"first_name":"Anne-Laure","last_name":"Besacier Monbertrand","full_name":"Besacier Monbertrand, Anne-Laure"},{"last_name":"Timoner","full_name":"Timoner, Pablo","first_name":"Pablo"},{"first_name":"Kazi","last_name":"Rahman","full_name":"Rahman, Kazi"},{"full_name":"Burlando, Paolo","last_name":"Burlando","first_name":"Paolo"},{"first_name":"Simone","last_name":"Fatichi","id":"cf8e546b-a9b0-11f0-a43b-aa89ed1b56d6","full_name":"Fatichi, Simone"},{"last_name":"Gonseth","full_name":"Gonseth, Yves","first_name":"Yves"},{"full_name":"Moser, Frédéric","last_name":"Moser","first_name":"Frédéric"},{"first_name":"Emmanuel","full_name":"Castella, Emmanuel","last_name":"Castella"},{"full_name":"Lehmann, Anthony","last_name":"Lehmann","first_name":"Anthony"}],"issue":"4","publication_status":"published"},{"date_updated":"2026-07-30T13:43:53Z","title":"Finding a Nash equilibrium is no easier than breaking Fiat-Shamir","oa":1,"day":"01","related_material":{"record":[{"relation":"dissertation_contains","id":"7896","status":"public"}]},"type":"conference","month":"06","page":"1103-1114","date_created":"2019-07-24T09:20:53Z","main_file_link":[{"open_access":"1","url":"https://eprint.iacr.org/2019/549"}],"department":[{"_id":"KrPi"}],"language":[{"iso":"eng"}],"scopus_import":"1","publisher":"ACM","ec_funded":1,"publication_identifier":{"isbn":["9781450367059"]},"year":"2019","_id":"6677","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","citation":{"ama":"Choudhuri AR, Hubáček P, Kamath Hosdurg C, Pietrzak KZ, Rosen A, Rothblum GN. Finding a Nash equilibrium is no easier than breaking Fiat-Shamir. In: <i>Proceedings of the 51st Annual ACM SIGACT Symposium on Theory of Computing  - STOC 2019</i>. ACM; 2019:1103-1114. doi:<a href=\"https://doi.org/10.1145/3313276.3316400\">10.1145/3313276.3316400</a>","mla":"Choudhuri, Arka Rai, et al. “Finding a Nash Equilibrium Is No Easier than Breaking Fiat-Shamir.” <i>Proceedings of the 51st Annual ACM SIGACT Symposium on Theory of Computing  - STOC 2019</i>, ACM, 2019, pp. 1103–14, doi:<a href=\"https://doi.org/10.1145/3313276.3316400\">10.1145/3313276.3316400</a>.","chicago":"Choudhuri, Arka Rai, Pavel Hubáček, Chethan Kamath Hosdurg, Krzysztof Z Pietrzak, Alon Rosen, and Guy N. Rothblum. “Finding a Nash Equilibrium Is No Easier than Breaking Fiat-Shamir.” In <i>Proceedings of the 51st Annual ACM SIGACT Symposium on Theory of Computing  - STOC 2019</i>, 1103–14. ACM, 2019. <a href=\"https://doi.org/10.1145/3313276.3316400\">https://doi.org/10.1145/3313276.3316400</a>.","short":"A.R. Choudhuri, P. Hubáček, C. Kamath Hosdurg, K.Z. Pietrzak, A. Rosen, G.N. Rothblum, in:, Proceedings of the 51st Annual ACM SIGACT Symposium on Theory of Computing  - STOC 2019, ACM, 2019, pp. 1103–1114.","apa":"Choudhuri, A. R., Hubáček, P., Kamath Hosdurg, C., Pietrzak, K. Z., Rosen, A., &#38; Rothblum, G. N. (2019). Finding a Nash equilibrium is no easier than breaking Fiat-Shamir. In <i>Proceedings of the 51st Annual ACM SIGACT Symposium on Theory of Computing  - STOC 2019</i> (pp. 1103–1114). Phoenix, AZ, United States: ACM. <a href=\"https://doi.org/10.1145/3313276.3316400\">https://doi.org/10.1145/3313276.3316400</a>","ieee":"A. R. Choudhuri, P. Hubáček, C. Kamath Hosdurg, K. Z. Pietrzak, A. Rosen, and G. N. Rothblum, “Finding a Nash equilibrium is no easier than breaking Fiat-Shamir,” in <i>Proceedings of the 51st Annual ACM SIGACT Symposium on Theory of Computing  - STOC 2019</i>, Phoenix, AZ, United States, 2019, pp. 1103–1114.","ista":"Choudhuri AR, Hubáček P, Kamath Hosdurg C, Pietrzak KZ, Rosen A, Rothblum GN. 2019. Finding a Nash equilibrium is no easier than breaking Fiat-Shamir. Proceedings of the 51st Annual ACM SIGACT Symposium on Theory of Computing  - STOC 2019. STOC: Symposium on Theory of Computing, 1103–1114."},"article_processing_charge":"No","external_id":{"isi":["000523199100100"]},"publication":"Proceedings of the 51st Annual ACM SIGACT Symposium on Theory of Computing  - STOC 2019","project":[{"_id":"258AA5B2-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","name":"Teaching Old Crypto New Tricks","grant_number":"682815"}],"fulldoi":"https://doi.org/10.1145/3313276.3316400","isi":1,"oa_version":"Preprint","date_published":"2019-06-01T00:00:00Z","author":[{"first_name":"Arka Rai","full_name":"Choudhuri, Arka Rai","last_name":"Choudhuri"},{"full_name":"Hubáček, Pavel","last_name":"Hubáček","first_name":"Pavel"},{"last_name":"Kamath Hosdurg","full_name":"Kamath Hosdurg, Chethan","id":"4BD3F30E-F248-11E8-B48F-1D18A9856A87","first_name":"Chethan","orcid":"0009-0006-6812-7317"},{"first_name":"Krzysztof Z","orcid":"0000-0002-9139-1654","last_name":"Pietrzak","full_name":"Pietrzak, Krzysztof Z","id":"3E04A7AA-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Rosen","full_name":"Rosen, Alon","first_name":"Alon"},{"last_name":"Rothblum","full_name":"Rothblum, Guy N.","first_name":"Guy N."}],"publication_status":"published","abstract":[{"lang":"eng","text":"The Fiat-Shamir heuristic transforms a public-coin interactive proof into a non-interactive argument, by replacing the verifier with a cryptographic hash function that is applied to the protocol’s transcript. Constructing hash functions for which this transformation is sound is a central and long-standing open question in cryptography.\r\n\r\nWe show that solving the END−OF−METERED−LINE problem is no easier than breaking the soundness of the Fiat-Shamir transformation when applied to the sumcheck protocol. In particular, if the transformed protocol is sound, then any hard problem in #P gives rise to a hard distribution in the class CLS, which is contained in PPAD. Our result opens up the possibility of sampling moderately-sized games for which it is hard to find a Nash equilibrium, by reducing the inversion of appropriately chosen one-way functions to #SAT.\r\n\r\nOur main technical contribution is a stateful incrementally verifiable procedure that, given a SAT instance over n variables, counts the number of satisfying assignments. This is accomplished via an exponential sequence of small steps, each computable in time poly(n). Incremental verifiability means that each intermediate state includes a sumcheck-based proof of its correctness, and the proof can be updated and verified in time poly(n)."}],"quality_controlled":"1","doi":"10.1145/3313276.3316400","conference":{"end_date":"2019-06-26","start_date":"2019-06-23","name":"STOC: Symposium on Theory of Computing","location":"Phoenix, AZ, United States"}},{"publication":"Nature","article_processing_charge":"No","external_id":{"pmid":["31485056 "]},"citation":{"ama":"Manoli G, Fatichi S, Schläpfer M, et al. Magnitude of urban heat islands largely explained by climate and population. <i>Nature</i>. 2019;573:55-60. doi:<a href=\"https://doi.org/10.1038/s41586-019-1512-9\">10.1038/s41586-019-1512-9</a>","mla":"Manoli, Gabriele, et al. “Magnitude of Urban Heat Islands Largely Explained by Climate and Population.” <i>Nature</i>, vol. 573, Springer Nature, 2019, pp. 55–60, doi:<a href=\"https://doi.org/10.1038/s41586-019-1512-9\">10.1038/s41586-019-1512-9</a>.","chicago":"Manoli, Gabriele, Simone Fatichi, Markus Schläpfer, Kailiang Yu, Thomas W. Crowther, Naika Meili, Paolo Burlando, Gabriel G. Katul, and Elie Bou-Zeid. “Magnitude of Urban Heat Islands Largely Explained by Climate and Population.” <i>Nature</i>. Springer Nature, 2019. <a href=\"https://doi.org/10.1038/s41586-019-1512-9\">https://doi.org/10.1038/s41586-019-1512-9</a>.","short":"G. Manoli, S. Fatichi, M. Schläpfer, K. Yu, T.W. Crowther, N. Meili, P. Burlando, G.G. Katul, E. Bou-Zeid, Nature 573 (2019) 55–60.","apa":"Manoli, G., Fatichi, S., Schläpfer, M., Yu, K., Crowther, T. W., Meili, N., … Bou-Zeid, E. (2019). Magnitude of urban heat islands largely explained by climate and population. <i>Nature</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41586-019-1512-9\">https://doi.org/10.1038/s41586-019-1512-9</a>","ista":"Manoli G, Fatichi S, Schläpfer M, Yu K, Crowther TW, Meili N, Burlando P, Katul GG, Bou-Zeid E. 2019. Magnitude of urban heat islands largely explained by climate and population. Nature. 573, 55–60.","ieee":"G. Manoli <i>et al.</i>, “Magnitude of urban heat islands largely explained by climate and population,” <i>Nature</i>, vol. 573. Springer Nature, pp. 55–60, 2019."},"OA_type":"closed access","_id":"22571","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","year":"2019","quality_controlled":"1","doi":"10.1038/s41586-019-1512-9","intvolume":"       573","abstract":[{"text":"Urban heat islands (UHIs) exacerbate the risk of heat-related mortality associated with global climate change. The intensity of UHIs varies with population size and mean annual precipitation, but a unifying explanation for this variation is lacking, and there are no geographically targeted guidelines for heat mitigation. Here we analyse summertime differences between urban and rural surface temperatures (ΔTs) worldwide and find a nonlinear increase in ΔTs with precipitation that is controlled by water or energy limitations on evapotranspiration and that modulates the scaling of ΔTs with city size. We introduce a coarse-grained model that links population, background climate, and UHI intensity, and show that urban–rural differences in evapotranspiration and convection efficiency are the main determinants of warming. The direct implication of these nonlinearities is that mitigation strategies aimed at increasing green cover and albedo are more efficient in dry regions, whereas the challenge of cooling tropical cities will require innovative solutions.","lang":"eng"}],"publication_status":"published","author":[{"last_name":"Manoli","full_name":"Manoli, Gabriele","first_name":"Gabriele"},{"first_name":"Simone","id":"cf8e546b-a9b0-11f0-a43b-aa89ed1b56d6","full_name":"Fatichi, Simone","last_name":"Fatichi"},{"first_name":"Markus","full_name":"Schläpfer, Markus","last_name":"Schläpfer"},{"first_name":"Kailiang","last_name":"Yu","full_name":"Yu, Kailiang"},{"first_name":"Thomas W.","last_name":"Crowther","full_name":"Crowther, Thomas W."},{"full_name":"Meili, Naika","last_name":"Meili","first_name":"Naika"},{"last_name":"Burlando","full_name":"Burlando, Paolo","first_name":"Paolo"},{"full_name":"Katul, Gabriel G.","last_name":"Katul","first_name":"Gabriel G."},{"full_name":"Bou-Zeid, Elie","last_name":"Bou-Zeid","first_name":"Elie"}],"oa_version":"None","fulldoi":"https://doi.org/10.1038/s41586-019-1512-9","date_published":"2019-09-05T00:00:00Z","day":"05","das_tickbox":"1","title":"Magnitude of urban heat islands largely explained by climate and population","date_updated":"2026-08-06T07:32:18Z","publication_identifier":{"eissn":["1476-4687"],"issn":["0028-0836"]},"publisher":"Springer Nature","scopus_import":"1","language":[{"iso":"eng"}],"extern":"1","page":"55-60","date_created":"2026-07-27T12:30:24Z","pmid":1,"volume":573,"article_type":"original","month":"09","type":"journal_article"},{"year":"2019","keyword":["Alpine ecohydrology","Climate change","Ecosystem sensitivity","Numerical modelling","Spatialheterogeneity"],"OA_type":"closed access","status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"22527","article_processing_charge":"No","citation":{"ama":"Mastrotheodoros T, Pappas C, Molnar P, Burlando P, Hadjidoukas P, Fatichi S. Ecohydrological dynamics in the Alps: Insights from a modelling analysis of the spatial variability. <i>Ecohydrology</i>. 2019;12(1). doi:<a href=\"https://doi.org/10.1002/eco.2054\">10.1002/eco.2054</a>","ista":"Mastrotheodoros T, Pappas C, Molnar P, Burlando P, Hadjidoukas P, Fatichi S. 2019. Ecohydrological dynamics in the Alps: Insights from a modelling analysis of the spatial variability. Ecohydrology. 12(1), e2054.","ieee":"T. Mastrotheodoros, C. Pappas, P. Molnar, P. Burlando, P. Hadjidoukas, and S. Fatichi, “Ecohydrological dynamics in the Alps: Insights from a modelling analysis of the spatial variability,” <i>Ecohydrology</i>, vol. 12, no. 1. Wiley, 2019.","apa":"Mastrotheodoros, T., Pappas, C., Molnar, P., Burlando, P., Hadjidoukas, P., &#38; Fatichi, S. (2019). Ecohydrological dynamics in the Alps: Insights from a modelling analysis of the spatial variability. <i>Ecohydrology</i>. Wiley. <a href=\"https://doi.org/10.1002/eco.2054\">https://doi.org/10.1002/eco.2054</a>","short":"T. Mastrotheodoros, C. Pappas, P. Molnar, P. Burlando, P. Hadjidoukas, S. Fatichi, Ecohydrology 12 (2019).","chicago":"Mastrotheodoros, Theodoros, Christoforos Pappas, Peter Molnar, Paolo Burlando, Panagiotis Hadjidoukas, and Simone Fatichi. “Ecohydrological Dynamics in the Alps: Insights from a Modelling Analysis of the Spatial Variability.” <i>Ecohydrology</i>. Wiley, 2019. <a href=\"https://doi.org/10.1002/eco.2054\">https://doi.org/10.1002/eco.2054</a>.","mla":"Mastrotheodoros, Theodoros, et al. “Ecohydrological Dynamics in the Alps: Insights from a Modelling Analysis of the Spatial Variability.” <i>Ecohydrology</i>, vol. 12, no. 1, e2054, Wiley, 2019, doi:<a href=\"https://doi.org/10.1002/eco.2054\">10.1002/eco.2054</a>."},"article_number":"e2054","publication":"Ecohydrology","oa_version":"None","fulldoi":"https://doi.org/10.1002/eco.2054","date_published":"2019-01-01T00:00:00Z","abstract":[{"text":"Mountain ecosystems are experiencing rapid warming resulting in ecological changes worldwide. Projecting the response of these ecosystems to climate change is thus crucial, but also uncertain due to complex interactions between topography, climate, and vegetation. Here, we performed numerical simulations in a real and a synthetic spatial domain covering a range of contrasting climatic conditions and vegetation characteristics representative of the European Alps. Simulations were run with the mechanistic ecohydrological model Tethys–Chloris to quantify the drivers of ecosystem functioning and to explore the vulnerability of Alpine ecosystems to climate change. We correlated the spatial distribution of ecohydrological responses with that of meteorological and topographic attributes and computed spatially explicit sensitivities of net primary productivity, transpiration, and snow cover to air temperature, radiation, and water availability. We also quantified how the variance in several ecohydrological processes, such as transpiration, quickly diminishes with increasing spatial aggregation, which highlights the importance of fine spatial resolution for resolving patterns in complex topographies. We conducted controlled numerical experiments in the synthetic domain to disentangle the effect of catchment orientation on ecohydrological variables, such as streamflow. Our results support previous studies reporting an altitude threshold below which Alpine ecosystems are water‐limited in the drier inner‐Alpine valleys and confirm that the wetter areas are temperature‐limited. High‐resolution simulations of mountainous areas can improve our understanding of ecosystem functioning across spatial scales. They can also locate the areas that are the most vulnerable to climate change and guide future measurement campaigns.","lang":"eng"}],"intvolume":"        12","publication_status":"published","author":[{"first_name":"Theodoros","full_name":"Mastrotheodoros, Theodoros","last_name":"Mastrotheodoros"},{"first_name":"Christoforos","last_name":"Pappas","full_name":"Pappas, Christoforos"},{"last_name":"Molnar","full_name":"Molnar, Peter","first_name":"Peter"},{"first_name":"Paolo","full_name":"Burlando, Paolo","last_name":"Burlando"},{"last_name":"Hadjidoukas","full_name":"Hadjidoukas, Panagiotis","first_name":"Panagiotis"},{"full_name":"Fatichi, Simone","id":"cf8e546b-a9b0-11f0-a43b-aa89ed1b56d6","last_name":"Fatichi","first_name":"Simone"}],"issue":"1","doi":"10.1002/eco.2054","quality_controlled":"1","date_updated":"2026-08-06T07:44:22Z","das_tickbox":"1","title":"Ecohydrological dynamics in the Alps: Insights from a modelling analysis of the spatial variability","day":"01","volume":12,"article_type":"original","date_created":"2026-07-27T12:30:24Z","extern":"1","type":"journal_article","month":"01","language":[{"iso":"eng"}],"scopus_import":"1","publication_identifier":{"eissn":["1936-0592"],"issn":["1936-0584"]},"publisher":"Wiley"}]