[{"language":[{"iso":"eng"}],"abstract":[{"text":"An eight-partition of a finite set of points (respectively, of a continuous mass distribution) in R^3\r\n consists of three planes that divide the space into 8 octants, such that each open octant contains at most 1/8 of the points (respectively, of the mass). In 1966, Hadwiger showed that any mass distribution in R^3 admits an eight-partition; moreover, one can prescribe the normal direction of one of the three planes. The analogous result for finite point sets follows by a standard limit argument. We prove the following variant of this result: any mass distribution (or point set) in R^3 admits an eight-partition for which the intersection of two of the planes is a line with a prescribed direction. Moreover, we present an efficient algorithm for calculating an eight-partition of a set of n points in R^3 (with prescribed normal direction of one of the planes) in time O(n^7/3). A preliminary version of this work appeared in SoCG’24 (Aronov et al., 40th International Symposium on Computational Geometry, 2024).","lang":"eng"}],"related_material":{"link":[{"relation":"erratum","url":"https://doi.org/10.1007/s00454-025-00759-w"}],"record":[{"id":"20339","relation":"dissertation_contains","status":"public"},{"status":"public","relation":"earlier_version","id":"18917"}]},"OA_place":"publisher","type":"journal_article","status":"public","quality_controlled":"1","PlanS_conform":"1","scopus_import":"1","OA_type":"hybrid","date_updated":"2026-10-21T13:38:17Z","author":[{"full_name":"Aronov, Boris","last_name":"Aronov","first_name":"Boris"},{"first_name":"Abdul","last_name":"Basit","full_name":"Basit, Abdul"},{"last_name":"Ramesh","first_name":"Indu","full_name":"Ramesh, Indu"},{"id":"0433290C-AF8F-11E9-A4C7-F729E6697425","full_name":"Tasinato, Gianluca","first_name":"Gianluca","last_name":"Tasinato"},{"orcid":"0000-0002-1494-0568","id":"36690CA2-F248-11E8-B48F-1D18A9856A87","full_name":"Wagner, Uli","first_name":"Uli","last_name":"Wagner"}],"file_date_updated":"2026-07-23T11:14:05Z","intvolume":"        75","acknowledgement":"Work by BA was supported by NSF grants CCF 15-40656 and CCF 20-08551, and by grant 2014/170 from the US-Israel Binational Science Foundation. Part of this research was conducted while BA was visiting ISTA in the summers of 2022 and 2023. The visit of BA to ISTA in the summer of 2022 was supported by an ISTA Visiting Professorship. Research of BA also partially supported by ERC grant no. 882971, “GeoScape,” and by the Erdős Center. Work by AB was supported by Australian Research Council grant DP220102212. Work by IR was supported by a Tandon School of Engineering Fellowship and by NSF Grant CCF-20-08551. BA and AB would like to thank William Steiger for insightful initial discussions of the problems addressed in this work. Open Access funding enabled and organized by CAUL and its Member Institutions.","isi":1,"publication_status":"published","date_created":"2025-06-22T22:02:07Z","year":"2026","publication":"Discrete & Computational Geometry","citation":{"ieee":"B. Aronov, A. Basit, I. Ramesh, G. Tasinato, and U. Wagner, “Eight-partitioning points in 3D, and efficiently too,” <i>Discrete &#38; Computational Geometry</i>, vol. 75. Springer Nature, pp. 1331–1355, 2026.","ista":"Aronov B, Basit A, Ramesh I, Tasinato G, Wagner U. 2026. Eight-partitioning points in 3D, and efficiently too. Discrete &#38; Computational Geometry. 75, 1331–1355.","ama":"Aronov B, Basit A, Ramesh I, Tasinato G, Wagner U. Eight-partitioning points in 3D, and efficiently too. <i>Discrete &#38; Computational Geometry</i>. 2026;75:1331-1355. doi:<a href=\"https://doi.org/10.1007/s00454-025-00739-0\">10.1007/s00454-025-00739-0</a>","mla":"Aronov, Boris, et al. “Eight-Partitioning Points in 3D, and Efficiently Too.” <i>Discrete &#38; Computational Geometry</i>, vol. 75, Springer Nature, 2026, pp. 1331–55, doi:<a href=\"https://doi.org/10.1007/s00454-025-00739-0\">10.1007/s00454-025-00739-0</a>.","chicago":"Aronov, Boris, Abdul Basit, Indu Ramesh, Gianluca Tasinato, and Uli Wagner. “Eight-Partitioning Points in 3D, and Efficiently Too.” <i>Discrete &#38; Computational Geometry</i>. Springer Nature, 2026. <a href=\"https://doi.org/10.1007/s00454-025-00739-0\">https://doi.org/10.1007/s00454-025-00739-0</a>.","apa":"Aronov, B., Basit, A., Ramesh, I., Tasinato, G., &#38; Wagner, U. (2026). Eight-partitioning points in 3D, and efficiently too. <i>Discrete &#38; Computational Geometry</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00454-025-00739-0\">https://doi.org/10.1007/s00454-025-00739-0</a>","short":"B. Aronov, A. Basit, I. Ramesh, G. Tasinato, U. Wagner, Discrete &#38; Computational Geometry 75 (2026) 1331–1355."},"oa_version":"Published Version","date_published":"2026-06-01T00:00:00Z","license":"https://creativecommons.org/licenses/by/4.0/","publisher":"Springer Nature","month":"06","ddc":["500"],"title":"Eight-partitioning points in 3D, and efficiently too","_id":"19860","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","supplementarymaterial":"yes","fulldoi":"https://doi.org/10.1007/s00454-025-00739-0","department":[{"_id":"UlWa"}],"day":"01","page":"1331-1355","publication_identifier":{"eissn":["1432-0444"],"issn":["0179-5376"]},"arxiv":1,"doi":"10.1007/s00454-025-00739-0","oa":1,"researchdata_availability":"no","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"success":1,"relation":"main_file","date_updated":"2026-07-23T11:14:05Z","access_level":"open_access","file_name":"2026_DiscreteCompGeom_Aronov.pdf","file_size":525281,"checksum":"a32774a0d14f46cafbd77bfb9d9ac4b6","creator":"dernst","content_type":"application/pdf","file_id":"22395","date_created":"2026-07-23T11:14:05Z"}],"has_accepted_license":"1","volume":75,"article_processing_charge":"Yes (via OA deal)","das_tickbox":"0","article_type":"original","external_id":{"isi":["001506904300001"],"arxiv":["2403.02627"]}},{"issue":"6795","corr_author":"1","file":[{"access_level":"open_access","date_updated":"2026-05-07T05:54:43Z","relation":"main_file","success":1,"date_created":"2026-05-07T05:54:43Z","file_id":"21832","content_type":"application/pdf","creator":"dernst","checksum":"eb5b29247832ecdc53c8146da0509bbe","file_size":6150733,"file_name":"2026_Science_Kulich_accepted.pdf"}],"oa":1,"project":[{"_id":"8f347782-16d5-11f0-9cad-8c19706ee739","grant_number":"101142681","name":"Cyclic nucleotides as second messengers in plants"},{"grant_number":"P37051","name":"Guanylate cyclase activity of TIR1/AFBs auxin receptors","_id":"7bcece63-9f16-11ee-852c-ae94e099eeb6"}],"doi":"10.1126/science.adu8197","has_accepted_license":"1","volume":392,"external_id":{"pmid":["41990180"]},"article_type":"original","article_processing_charge":"No","_id":"21763","title":"Calcium-triggered apoplastic ROS bursts balance gravity and mechanical signals for soil navigation","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","department":[{"_id":"JiFr"},{"_id":"GradSch"}],"fulldoi":"https://doi.org/10.1126/science.adu8197","acknowledged_ssus":[{"_id":"LifeSc"},{"_id":"Bio"}],"page":"296-300","day":"16","publication_identifier":{"issn":["0036-8075"],"eissn":["1095-9203"]},"intvolume":"       392","acknowledgement":"We gratefully acknowledge the Lab Support Facility (LSF) and the Imaging and Optics Facility (IOF) (both of ISTA) and the Hounsfield CT Facility (University of Nottingham) for support with imaging and the Growth Facility (IPMB) for plant cultivation. We thank M. Fendrych and his team for help with the microfluidics upgrades and J. Atkinson at the University of Nottingham MakerSpace for 3D printing of Arabidopsis mini-soil columns.\r\nThis project received funding from the European Research Council (ERC; 101142681 CYNIPS) and the Austrian Science Fund (FWF; P 37051-B). I.K. was cofunded by the European Union, Horizon Europe, project MOLIPEC, ID 101087030 and CSF project 25-16449S. L.V. and B.K.P. acknowledge funding from UK Research and Innovation (UKRI) Frontiers Research (EP/Y036697/1). M.J.B. acknowledges funding from ERC SYNERGY (grant 101118769 HYDROSENSING). The study was partially supported by the Université Paris Cité, Idex ANR-18-IDEX-0001, funded by the French Government through its “Investments for the Future” program and also by the projects “Mecha-Nuc” ANR-20-CE13-0025-03 and “scEm-bryoMech” ANR-21-CE13-0046. P.D. acknowledges support by Human Frontier Science Program Organization grant 2022-RG107. P.V. acknowledges support provided by “Programme blanc” of the Graduate School BIOSPHERA, Université Paris-Saclay. Phytohormonal analysis was performed using the service laboratory funded by Toward Next GENeration Crops, reg. no. CZ.02.01.01/00/22_008/0004581 of the European Regional Development Fund (ERDF) program Johannes Amos Comenius. This research was funded in whole or in part by the Austrian Science Fund (P 37051-B) and UK Research and Innovation (EP/Y036697/1), cOAlition S organizations, and by the European Research Council (101142681 CYNIPS, 101118769 HYDROSENSING); as required, the author will make the Author Accepted Manuscript (AAM) version available under a CC BY public copyright license.","file_date_updated":"2026-05-07T05:54:43Z","publication_status":"published","date_created":"2026-04-26T22:01:47Z","publication":"Science","year":"2026","oa_version":"Accepted Version","citation":{"ama":"Kulich I, Vladimirtsev D, Randuch M, et al. Calcium-triggered apoplastic ROS bursts balance gravity and mechanical signals for soil navigation. <i>Science</i>. 2026;392(6795):296-300. doi:<a href=\"https://doi.org/10.1126/science.adu8197\">10.1126/science.adu8197</a>","ista":"Kulich I, Vladimirtsev D, Randuch M, Gao S, Citterico M, Konrad KR, Nagel G, Wrzaczek M, Cascaro L, Vinet P, Durand P, Asnacios A, Verma L, Bennett MJ, Pandey BK, Friml J. 2026. Calcium-triggered apoplastic ROS bursts balance gravity and mechanical signals for soil navigation. Science. 392(6795), 296–300.","ieee":"I. Kulich <i>et al.</i>, “Calcium-triggered apoplastic ROS bursts balance gravity and mechanical signals for soil navigation,” <i>Science</i>, vol. 392, no. 6795. AAAS, pp. 296–300, 2026.","short":"I. Kulich, D. Vladimirtsev, M. Randuch, S. Gao, M. Citterico, K.R. Konrad, G. Nagel, M. Wrzaczek, L. Cascaro, P. Vinet, P. Durand, A. Asnacios, L. Verma, M.J. Bennett, B.K. Pandey, J. Friml, Science 392 (2026) 296–300.","apa":"Kulich, I., Vladimirtsev, D., Randuch, M., Gao, S., Citterico, M., Konrad, K. R., … Friml, J. (2026). Calcium-triggered apoplastic ROS bursts balance gravity and mechanical signals for soil navigation. <i>Science</i>. AAAS. <a href=\"https://doi.org/10.1126/science.adu8197\">https://doi.org/10.1126/science.adu8197</a>","chicago":"Kulich, Ivan, Dmitrii Vladimirtsev, Marek Randuch, Shiqiang Gao, Matteo Citterico, Kai R. Konrad, Georg Nagel, et al. “Calcium-Triggered Apoplastic ROS Bursts Balance Gravity and Mechanical Signals for Soil Navigation.” <i>Science</i>. AAAS, 2026. <a href=\"https://doi.org/10.1126/science.adu8197\">https://doi.org/10.1126/science.adu8197</a>.","mla":"Kulich, Ivan, et al. “Calcium-Triggered Apoplastic ROS Bursts Balance Gravity and Mechanical Signals for Soil Navigation.” <i>Science</i>, vol. 392, no. 6795, AAAS, 2026, pp. 296–300, doi:<a href=\"https://doi.org/10.1126/science.adu8197\">10.1126/science.adu8197</a>."},"publisher":"AAAS","month":"04","ddc":["580"],"date_published":"2026-04-16T00:00:00Z","pmid":1,"OA_place":"repository","type":"journal_article","language":[{"iso":"eng"}],"abstract":[{"text":"Reactive oxygen species (ROS) have been implicated in multiple signaling processes in plants, but the underlying mechanisms and roles remain enigmatic. In this study, we developed a method of live imaging of apoplastic ROS at the root surface. Distinct signals, including auxin, extracellular adenosine triphosphate, and rapid alkalinization factor 1 peptide, induce cytosolic calcium transients and apoplastic ROS bursts. Genetic and optogenetic manipulations of Arabidopsis identified calcium transients as necessary and sufficient for ROS bursts through activation of reduced nicotinamide adenine dinucleotide phosphate (NADPH) oxidases RBOHC and RBOHF. Apoplastic ROS bursts are not required, but they do limit gravity-induced root bending. Root bending is sensed by the stretch-activated calcium channel MCA1, leading to NADPH oxidase activation. The resulting ROS production stiffens cell walls to facilitate soil penetration. Apoplastic ROS thus provides a means to balance tissue flexibility and stiffness to navigate soil.","lang":"eng"}],"related_material":{"record":[{"relation":"dissertation_contains","id":"23145","status":"public"}]},"quality_controlled":"1","status":"public","scopus_import":"1","OA_type":"green","date_updated":"2026-10-22T09:15:44Z","author":[{"first_name":"Ivan","last_name":"Kulich","id":"57a1567c-8314-11eb-9063-c9ddc3451a54","full_name":"Kulich, Ivan"},{"first_name":"Dmitrii","last_name":"Vladimirtsev","id":"60466724-5355-11ee-ae5a-fa55e8f99c3d","full_name":"Vladimirtsev, Dmitrii"},{"id":"6ac4636d-15b2-11ec-abd3-fb8df79972ae","full_name":"Randuch, Marek","first_name":"Marek","last_name":"Randuch"},{"full_name":"Gao, Shiqiang","first_name":"Shiqiang","last_name":"Gao"},{"full_name":"Citterico, Matteo","first_name":"Matteo","last_name":"Citterico"},{"last_name":"Konrad","first_name":"Kai R.","full_name":"Konrad, Kai R."},{"first_name":"Georg","last_name":"Nagel","full_name":"Nagel, Georg"},{"first_name":"Michael","last_name":"Wrzaczek","full_name":"Wrzaczek, Michael"},{"last_name":"Cascaro","first_name":"Léa","full_name":"Cascaro, Léa"},{"last_name":"Vinet","first_name":"Pauline","full_name":"Vinet, Pauline"},{"last_name":"Durand","first_name":"Pauline","full_name":"Durand, Pauline"},{"last_name":"Asnacios","first_name":"Atef","full_name":"Asnacios, Atef"},{"full_name":"Verma, Lokesh","last_name":"Verma","first_name":"Lokesh"},{"first_name":"Malcolm J.","last_name":"Bennett","full_name":"Bennett, Malcolm J."},{"full_name":"Pandey, Bipin K.","last_name":"Pandey","first_name":"Bipin K."},{"orcid":"0000-0002-8302-7596","full_name":"Friml, Jiří","id":"4159519E-F248-11E8-B48F-1D18A9856A87","last_name":"Friml","first_name":"Jiří"}]},{"has_accepted_license":"1","alternative_title":["ISTA Thesis"],"article_processing_charge":"No","corr_author":"1","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","image":"/images/cc_by_sa.png","name":"Creative Commons Attribution-ShareAlike 4.0 International Public License (CC BY-SA 4.0)","short":"CC BY-SA (4.0)"},"file":[{"content_type":"application/vnd.openxmlformats-officedocument.wordprocessingml.document","date_created":"2026-10-20T09:17:28Z","file_id":"23176","file_size":89544771,"file_name":"2026_Marek_Randuch_Thesis.docx","checksum":"4ace20ba4f1bb0f8dcc3f8eb45eb68fa","creator":"mranduch","access_level":"closed","relation":"source_file","date_updated":"2026-10-20T11:48:37Z"},{"file_name":"2026_Marek_Randuch_Thesis.pdf","file_size":28321059,"checksum":"fc630c7e8d795e7f13000cbb428424b3","creator":"mranduch","content_type":"application/pdf","date_created":"2026-10-20T09:17:20Z","file_id":"23177","embargo_to":"open_access","date_updated":"2026-10-20T11:48:37Z","relation":"main_file","access_level":"closed","embargo":"2027-10-20"}],"doi":"10.15479/AT-ISTA-23145","project":[{"grant_number":"P37051","name":"Guanylate cyclase activity of TIR1/AFBs auxin receptors","_id":"7bcece63-9f16-11ee-852c-ae94e099eeb6"},{"name":"Cyclic nucleotides as second messengers in plants","grant_number":"101142681","_id":"8f347782-16d5-11f0-9cad-8c19706ee739"}],"department":[{"_id":"GradSch"},{"_id":"JiFr"}],"degree_awarded":"PhD","fulldoi":"https://doi.org/10.15479/AT-ISTA-23145","acknowledged_ssus":[{"_id":"LifeSc"},{"_id":"M-Shop"},{"_id":"CampIT"},{"_id":"Bio"}],"publication_identifier":{"issn":["2663-337X"]},"page":"289","day":"18","supervisor":[{"id":"4159519E-F248-11E8-B48F-1D18A9856A87","full_name":"Friml, Jiří","first_name":"Jiří","last_name":"Friml","orcid":"0000-0002-8302-7596"}],"_id":"23145","title":"Fast growth responses in plants: Growth regulation and phospho-proteomic ","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","doi_confirm":"1","oa_version":"Published Version","citation":{"ieee":"M. Randuch, “Fast growth responses in plants: Growth regulation and phospho-proteomic ,” Institute of Science and Technology Austria, 2026.","ista":"Randuch M. 2026. Fast growth responses in plants: Growth regulation and phospho-proteomic . Institute of Science and Technology Austria.","ama":"Randuch M. Fast growth responses in plants: Growth regulation and phospho-proteomic . 2026. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-23145\">10.15479/AT-ISTA-23145</a>","short":"M. Randuch, Fast Growth Responses in Plants: Growth Regulation and Phospho-Proteomic , Institute of Science and Technology Austria, 2026.","chicago":"Randuch, Marek. “Fast Growth Responses in Plants: Growth Regulation and Phospho-Proteomic .” Institute of Science and Technology Austria, 2026. <a href=\"https://doi.org/10.15479/AT-ISTA-23145\">https://doi.org/10.15479/AT-ISTA-23145</a>.","mla":"Randuch, Marek. <i>Fast Growth Responses in Plants: Growth Regulation and Phospho-Proteomic </i>. Institute of Science and Technology Austria, 2026, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-23145\">10.15479/AT-ISTA-23145</a>.","apa":"Randuch, M. (2026). <i>Fast growth responses in plants: Growth regulation and phospho-proteomic </i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-23145\">https://doi.org/10.15479/AT-ISTA-23145</a>"},"month":"10","ddc":["580"],"publisher":"Institute of Science and Technology Austria","license":"https://creativecommons.org/licenses/by-sa/4.0/","date_published":"2026-10-18T00:00:00Z","acknowledgement":"European Research Council (101142681 CYNIPS), Cyclic nucleotides as second messengers \r\nin plants, DOI: https://doi.org/10.3030/101142681 \r\nAustrian Science Fund (P 37051-B), Guanylate cyclase activity of TIR1/AFBs auxin receptors, \r\nDOI: https://doi.org/10.55776/P37051 ","file_date_updated":"2026-10-20T11:48:37Z","year":"2026","date_created":"2026-10-16T17:14:40Z","publication_status":"published","date_updated":"2026-10-22T09:15:44Z","author":[{"first_name":"Marek","last_name":"Randuch","id":"6ac4636d-15b2-11ec-abd3-fb8df79972ae","full_name":"Randuch, Marek"}],"type":"dissertation","OA_place":"publisher","related_material":{"record":[{"status":"public","id":"12291","relation":"part_of_dissertation"},{"status":"public","id":"21763","relation":"part_of_dissertation"},{"status":"public","relation":"part_of_dissertation","id":"23175"},{"status":"public","id":"23174","relation":"part_of_dissertation"},{"id":"20656","relation":"part_of_dissertation","status":"public"}]},"language":[{"iso":"eng"}],"status":"public"},{"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","biorxivid":1,"title":"Ca2+ signature gates early auxin signaling in Arabidopsis roots","_id":"23175","day":"26","fulldoi":"https://doi.org/10.1101/2025.10.04.680446","department":[{"_id":"JiFr"}],"doi":"10.1101/2025.10.04.680446","project":[{"name":"Cyclic nucleotides as second messengers in plants","grant_number":"101142681","_id":"8f347782-16d5-11f0-9cad-8c19706ee739"},{"grant_number":"P37051","name":"Guanylate cyclase activity of TIR1/AFBs auxin receptors","_id":"7bcece63-9f16-11ee-852c-ae94e099eeb6"}],"oa":1,"tmp":{"short":"CC BY-NC-ND (4.0)","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","image":"/images/cc_by_nc_nd.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode"},"corr_author":"1","article_processing_charge":"No","external_id":{"biorxivid":["10.1101/2025.10.04.680446"]},"main_file_link":[{"url":"https://doi.org/10.1101/2025.10.04.680446","open_access":"1"}],"status":"public","related_material":{"record":[{"relation":"dissertation_contains","id":"23145","status":"public"}]},"abstract":[{"text":"Plants must continually balance growth with arrest, especially under stress. Auxin signaling acts as a central regulatory hub in this process, yet the mechanisms that dynamically tune early auxin signalling in real time remain unknown. Here, we used the light-gated, Ca2+-permeable Channelrhodopsin 2 variant XXM2.0 to optogenetically impose defined Ca2+ signatures on Arabidopsis root cells. Repetitive light activation triggered cytosolic Ca2+ signals that in turn suppressed auxin-induced membrane depolarization and Ca2+ transients. Moreover, prolonged optogenetic Ca2+ stimulation affects auxin-responsive transcriptional reprogramming. As phenotypic output, reversible inhibition of root growth by suppressing cell division and elongation was observed. We further identify a candidate CaM7–CNGC14 module that likely mediates Ca2+-dependent gating of early auxin signalling. Our study thus introduces a synthetic biology approach to decompose calcium–auxin crosstalk in plant cells, and demonstrates that optogenetically imposed cytosolic Ca2+ signals act as dynamic regulators of auxin susceptibility in roots.","lang":"eng"}],"language":[{"iso":"eng"}],"type":"preprint","OA_place":"repository","author":[{"full_name":"Song, Huifang","last_name":"Song","first_name":"Huifang"},{"last_name":"Baudon","first_name":"Angel","full_name":"Baudon, Angel"},{"full_name":"Freund, Matthias","last_name":"Freund","first_name":"Matthias"},{"id":"6ac4636d-15b2-11ec-abd3-fb8df79972ae","full_name":"Randuch, Marek","first_name":"Marek","last_name":"Randuch"},{"last_name":"Pěnčík","first_name":"Aleš","full_name":"Pěnčík, Aleš"},{"full_name":"Ondřej, Novák","first_name":"Novák","last_name":"Ondřej"},{"first_name":"Zhaohui","last_name":"He","full_name":"He, Zhaohui"},{"last_name":"Kaufmann","first_name":"Kerstin","full_name":"Kaufmann, Kerstin"},{"full_name":"Li, Nan","first_name":"Nan","last_name":"Li"},{"last_name":"Gilliham","first_name":"Matthew","full_name":"Gilliham, Matthew"},{"last_name":"Friml","first_name":"Jiří","full_name":"Friml, Jiří","id":"4159519E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8302-7596"},{"full_name":"Hedrich, Rainer","last_name":"Hedrich","first_name":"Rainer"},{"first_name":"Shouguang","last_name":"Huang","full_name":"Huang, Shouguang"}],"date_updated":"2026-10-22T09:15:44Z","OA_type":"green","date_created":"2026-10-19T11:51:47Z","year":"2026","publication":"bioRxiv","publication_status":"draft","acknowledgement":"We would like to thank Dirk Becker (University of Wuerzburg) for his help in making the optogenetic constructs and for his comments on the manuscript. We also appreciate Rob Roelfsema (University of Wuerzburg) for his feedback on the manuscript. We sincerely thank the anonymous reviewers for the thoughtful and inspiring suggestions that helped broaden the discussion and identify important future research directions. Funding\r\nNational Key R&D Program of China, 2025YFA0923400 (RH)\r\n\r\nNational Natural Science Foundation of China (NSFC), W2531024 (RH); 32271501(NL)\r\n\r\nNSFC-Excellent Young Scientists Fund Program (overseas) (SH)\r\n\r\nNSFC-RFIS, ZB2025101410702 (RH)\r\n\r\nGuangdong Pearl River Talents Program, 2023ZT10N033\r\n\r\nChina Scholarship Council no. 202306510063 (HS)\r\n\r\nThe European Research Council grant 101142681 CYNIPS (JF)\r\n\r\nAustrian Science Fund grant FWF; P 37051-B (JF)\r\n\r\nGerman Research Foundation grant CRC 1644 (512328399; 512328399) (KK, ZH)\r\n\r\nERC Synergy project STARMORPH, reg. no. 101166880 (AP, ON)","license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","date_published":"2026-08-26T00:00:00Z","month":"08","citation":{"chicago":"Song, Huifang, Angel Baudon, Matthias Freund, Marek Randuch, Aleš Pěnčík, Novák Ondřej, Zhaohui He, et al. “Ca2+ Signature Gates Early Auxin Signaling in Arabidopsis Roots.” <i>BioRxiv</i>, n.d. <a href=\"https://doi.org/10.1101/2025.10.04.680446\">https://doi.org/10.1101/2025.10.04.680446</a>.","mla":"Song, Huifang, et al. “Ca2+ Signature Gates Early Auxin Signaling in Arabidopsis Roots.” <i>BioRxiv</i>, doi:<a href=\"https://doi.org/10.1101/2025.10.04.680446\">10.1101/2025.10.04.680446</a>.","apa":"Song, H., Baudon, A., Freund, M., Randuch, M., Pěnčík, A., Ondřej, N., … Huang, S. (n.d.). Ca2+ signature gates early auxin signaling in Arabidopsis roots. <i>bioRxiv</i>. <a href=\"https://doi.org/10.1101/2025.10.04.680446\">https://doi.org/10.1101/2025.10.04.680446</a>","short":"H. Song, A. Baudon, M. Freund, M. Randuch, A. Pěnčík, N. Ondřej, Z. He, K. Kaufmann, N. Li, M. Gilliham, J. Friml, R. Hedrich, S. Huang, BioRxiv (n.d.).","ieee":"H. Song <i>et al.</i>, “Ca2+ signature gates early auxin signaling in Arabidopsis roots,” <i>bioRxiv</i>. .","ista":"Song H, Baudon A, Freund M, Randuch M, Pěnčík A, Ondřej N, He Z, Kaufmann K, Li N, Gilliham M, Friml J, Hedrich R, Huang S. Ca2+ signature gates early auxin signaling in Arabidopsis roots. bioRxiv, <a href=\"https://doi.org/10.1101/2025.10.04.680446\">10.1101/2025.10.04.680446</a>.","ama":"Song H, Baudon A, Freund M, et al. Ca2+ signature gates early auxin signaling in Arabidopsis roots. <i>bioRxiv</i>. doi:<a href=\"https://doi.org/10.1101/2025.10.04.680446\">10.1101/2025.10.04.680446</a>"},"oa_version":"Preprint"},{"quality_controlled":"1","status":"public","type":"conference","abstract":[{"lang":"eng","text":"We develop a quantum theory of light-matter interactions in 229Th nanophotonic resonators pumped via the optonuclear quadrupolar effect, predicting detectable photon fluxes with realistic platforms and revealing how collective dynamics shape the future nuclear clock performance."}],"language":[{"iso":"eng"}],"author":[{"last_name":"Mamian","first_name":"Karen","full_name":"Mamian, Karen","id":"d21e88e4-b0a3-11f1-8f28-b033c1af3b5a"},{"full_name":"De Haan, Jan","last_name":"De Haan","first_name":"Jan"},{"first_name":"Toby","last_name":"Bi","full_name":"Bi, Toby"},{"full_name":"Dubey, Swadheen","last_name":"Dubey","first_name":"Swadheen"},{"full_name":"Kazakov, Georgy A.","last_name":"Kazakov","first_name":"Georgy A."},{"full_name":"Beeks, Kjeld","last_name":"Beeks","first_name":"Kjeld"},{"last_name":"Marquardt","first_name":"Christoph","full_name":"Marquardt, Christoph"},{"last_name":"Kraemer","first_name":"Sandro","full_name":"Kraemer, Sandro"},{"full_name":"Pereira, Lino M.C.","last_name":"Pereira","first_name":"Lino M.C."},{"full_name":"Del’Haye, Pascal","last_name":"Del’Haye","first_name":"Pascal"},{"first_name":"Kasper","last_name":"Van Gasse","full_name":"Van Gasse, Kasper"},{"first_name":"Thorsten","last_name":"Schumm","full_name":"Schumm, Thorsten"},{"first_name":"Charles","last_name":"Roques-Carmes","id":"e2e68fc9-6505-11ef-a541-eb4e72cc3e82","full_name":"Roques-Carmes, Charles"}],"date_updated":"2026-10-27T10:53:59Z","OA_type":"closed access","scopus_import":"1","date_created":"2026-10-25T23:02:24Z","year":"2026","publication":"CLEO Fundamental Science Proceedings","publication_status":"published","article_number":"FTU1B.4","month":"05","publisher":"Optica Publishing Group","date_published":"2026-05-15T00:00:00Z","oa_version":"None","citation":{"chicago":"Mamian, Karen, Jan De Haan, Toby Bi, Swadheen Dubey, Georgy A. Kazakov, Kjeld Beeks, Christoph Marquardt, et al. “Collective Optonuclear Cavity Quantum Electrodynamics in 229Th Nanophotonic Resonators.” In <i>CLEO Fundamental Science Proceedings</i>. Optica Publishing Group, 2026. <a href=\"https://doi.org/10.1364/CLEO_FS.2026.FTU1B.4\">https://doi.org/10.1364/CLEO_FS.2026.FTU1B.4</a>.","mla":"Mamian, Karen, et al. “Collective Optonuclear Cavity Quantum Electrodynamics in 229Th Nanophotonic Resonators.” <i>CLEO Fundamental Science Proceedings</i>, FTU1B.4, Optica Publishing Group, 2026, doi:<a href=\"https://doi.org/10.1364/CLEO_FS.2026.FTU1B.4\">10.1364/CLEO_FS.2026.FTU1B.4</a>.","apa":"Mamian, K., De Haan, J., Bi, T., Dubey, S., Kazakov, G. A., Beeks, K., … Roques-Carmes, C. (2026). Collective optonuclear cavity quantum electrodynamics in 229Th nanophotonic resonators. In <i>CLEO Fundamental Science Proceedings</i>. Long Beach, CA, United States: Optica Publishing Group. <a href=\"https://doi.org/10.1364/CLEO_FS.2026.FTU1B.4\">https://doi.org/10.1364/CLEO_FS.2026.FTU1B.4</a>","short":"K. Mamian, J. De Haan, T. Bi, S. Dubey, G.A. Kazakov, K. Beeks, C. Marquardt, S. Kraemer, L.M.C. Pereira, P. Del’Haye, K. Van Gasse, T. Schumm, C. Roques-Carmes, in:, CLEO Fundamental Science Proceedings, Optica Publishing Group, 2026.","ista":"Mamian K, De Haan J, Bi T, Dubey S, Kazakov GA, Beeks K, Marquardt C, Kraemer S, Pereira LMC, Del’Haye P, Van Gasse K, Schumm T, Roques-Carmes C. 2026. Collective optonuclear cavity quantum electrodynamics in 229Th nanophotonic resonators. CLEO Fundamental Science Proceedings. CLEO: Fundamental Science, Technical Digest Series, , FTU1B.4.","ieee":"K. Mamian <i>et al.</i>, “Collective optonuclear cavity quantum electrodynamics in 229Th nanophotonic resonators,” in <i>CLEO Fundamental Science Proceedings</i>, Long Beach, CA, United States, 2026.","ama":"Mamian K, De Haan J, Bi T, et al. Collective optonuclear cavity quantum electrodynamics in 229Th nanophotonic resonators. In: <i>CLEO Fundamental Science Proceedings</i>. Optica Publishing Group; 2026. doi:<a href=\"https://doi.org/10.1364/CLEO_FS.2026.FTU1B.4\">10.1364/CLEO_FS.2026.FTU1B.4</a>"},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"23197","title":"Collective optonuclear cavity quantum electrodynamics in 229Th nanophotonic resonators","publication_identifier":{"isbn":["9781957171586"]},"day":"15","department":[{"_id":"ChRo"}],"fulldoi":"https://doi.org/10.1364/CLEO_FS.2026.FTU1B.4","doi":"10.1364/CLEO_FS.2026.FTU1B.4","conference":{"name":"CLEO: Fundamental Science","location":"Long Beach, CA, United States","start_date":"2026-05-02","end_date":"2026-05-06"},"corr_author":"1","alternative_title":["Technical Digest Series"],"article_processing_charge":"No"},{"article_number":"102483","acknowledgement":"We thank Nick Barton and Noa Ottilie Borst for essential contributions to this manuscript.\r\nE.M. acknowledges support from the APART-USA fellowship, jointly funded by the Austrian Academy of Sciences (ÖAW) and the Institute of Science and Technology Austria (ISTA).\r\nThis study was supported by the European Molecular Biology Laboratory (J.C.); the European Molecular Biology Laboratory Interdisciplinary Postdoc Programme (EIPOD) under the Marie Skłodowska-Curie Actions cofund (S.H.A.).","intvolume":"        99","publication":"Current Opinion in Genetics & Development","date_created":"2026-06-10T07:37:12Z","year":"2026","publication_status":"epub_ahead","citation":{"chicago":"Mascolo, Elia, Reka E Körei, Santiago Herrera-Álvarez, Calin C Guet, Justin Crocker, and Gašper Tkačik. “Long-Term Evolution of Regulatory DNA Sequences. Part 1: Simulations on Global, Biophysically-Realistic Genotype–Phenotype Maps.” <i>Current Opinion in Genetics &#38; Development</i>. Elsevier, 2026. <a href=\"https://doi.org/10.1016/j.gde.2026.102483\">https://doi.org/10.1016/j.gde.2026.102483</a>.","mla":"Mascolo, Elia, et al. “Long-Term Evolution of Regulatory DNA Sequences. Part 1: Simulations on Global, Biophysically-Realistic Genotype–Phenotype Maps.” <i>Current Opinion in Genetics &#38; Development</i>, vol. 99, 102483, Elsevier, 2026, doi:<a href=\"https://doi.org/10.1016/j.gde.2026.102483\">10.1016/j.gde.2026.102483</a>.","apa":"Mascolo, E., Körei, R. E., Herrera-Álvarez, S., Guet, C. C., Crocker, J., &#38; Tkačik, G. (2026). Long-term evolution of regulatory DNA sequences. Part 1: Simulations on global, biophysically-realistic genotype–phenotype maps. <i>Current Opinion in Genetics &#38; Development</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.gde.2026.102483\">https://doi.org/10.1016/j.gde.2026.102483</a>","short":"E. Mascolo, R.E. Körei, S. Herrera-Álvarez, C.C. Guet, J. Crocker, G. Tkačik, Current Opinion in Genetics &#38; Development 99 (2026).","ista":"Mascolo E, Körei RE, Herrera-Álvarez S, Guet CC, Crocker J, Tkačik G. 2026. Long-term evolution of regulatory DNA sequences. Part 1: Simulations on global, biophysically-realistic genotype–phenotype maps. Current Opinion in Genetics &#38; Development. 99, 102483.","ieee":"E. Mascolo, R. E. Körei, S. Herrera-Álvarez, C. C. Guet, J. Crocker, and G. Tkačik, “Long-term evolution of regulatory DNA sequences. Part 1: Simulations on global, biophysically-realistic genotype–phenotype maps,” <i>Current Opinion in Genetics &#38; Development</i>, vol. 99. Elsevier, 2026.","ama":"Mascolo E, Körei RE, Herrera-Álvarez S, Guet CC, Crocker J, Tkačik G. Long-term evolution of regulatory DNA sequences. Part 1: Simulations on global, biophysically-realistic genotype–phenotype maps. <i>Current Opinion in Genetics &#38; Development</i>. 2026;99. doi:<a href=\"https://doi.org/10.1016/j.gde.2026.102483\">10.1016/j.gde.2026.102483</a>"},"oa_version":"Published Version","date_published":"2026-05-09T00:00:00Z","month":"05","ddc":["570"],"publisher":"Elsevier","abstract":[{"text":"Promoters and enhancers are cis-regulatory elements (CREs), DNA sequences that bind transcription factor (TF) proteins to up- or down-regulate target genes. Decades-long efforts yielded TF-DNA interaction models that predict how strongly an individual TF binds arbitrary DNA sequences and how individual binding events on the CRE combine to affect gene expression. These insights can be synthesized into a global, biophysically realistic, and quantitative genotype–phenotype map for gene regulation, a ‘holy grail’ for the application of evolutionary theory. A global map provides a rare opportunity to simulate the long-term evolution of regulatory sequences and pose several fundamental questions: How long does it take to evolve CREs de novo? How many non-trivial regulatory functions exist in sequence space? How connected are they? For which regulatory architecture is CRE evolution most rapid and evolvable? In this article, the first of a two-part series, we briefly review the pertinent modeling and simulation efforts for a unique system that enables close, quantitative, and mechanistic links between biophysics, as well as systems, synthetic, and evolutionary biology.","lang":"eng"}],"language":[{"iso":"eng"}],"type":"journal_article","OA_place":"publisher","PlanS_conform":"1","quality_controlled":"1","status":"public","date_updated":"2026-10-27T13:12:27Z","scopus_import":"1","OA_type":"hybrid","author":[{"full_name":"Mascolo, Elia","id":"776a6ed0-a053-11f0-8635-80b95e0e0d53","last_name":"Mascolo","first_name":"Elia","orcid":"0000-0003-2977-7844"},{"id":"50FDE43E-AA30-11E9-A72B-8A12E6697425","full_name":"Körei, Reka E","first_name":"Reka E","last_name":"Körei"},{"first_name":"Santiago","last_name":"Herrera-Álvarez","full_name":"Herrera-Álvarez, Santiago"},{"orcid":"0000-0001-6220-2052","id":"47F8433E-F248-11E8-B48F-1D18A9856A87","full_name":"Guet, Calin C","first_name":"Calin C","last_name":"Guet"},{"last_name":"Crocker","first_name":"Justin","full_name":"Crocker, Justin"},{"first_name":"Gašper","last_name":"Tkačik","id":"3D494DCA-F248-11E8-B48F-1D18A9856A87","full_name":"Tkačik, Gašper","orcid":"0000-0002-6699-1455"}],"corr_author":"1","oa":1,"doi":"10.1016/j.gde.2026.102483","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1016/j.gde.2026.102483"}],"has_accepted_license":"1","volume":99,"article_processing_charge":"Yes (via OA deal)","external_id":{"arxiv":["2601.19681"]},"article_type":"original","title":"Long-term evolution of regulatory DNA sequences. Part 1: Simulations on global, biophysically-realistic genotype–phenotype maps","_id":"21983","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","fulldoi":"https://doi.org/10.1016/j.gde.2026.102483","department":[{"_id":"GradSch"},{"_id":"CaGu"},{"_id":"GaTk"}],"arxiv":1,"publication_identifier":{"issn":["0959-437X"],"eissn":["1879-0380"]},"day":"09"},{"supplementarymaterial":"yes","fulldoi":"https://doi.org/10.1038/s41467-026-77326-1","department":[{"_id":"XiFe"}],"publication_identifier":{"eissn":["2041-1723"]},"day":"14","title":"Multiple Argonaute complexes orchestrate epigenetic silencing in the Arabidopsis germline","_id":"23198","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","ec_funded":1,"volume":17,"has_accepted_license":"1","article_processing_charge":"Yes","das_tickbox":"1","external_id":{"pmid":["42869904"]},"article_type":"original","corr_author":"1","oa":1,"doi":"10.1038/s41467-026-77326-1","project":[{"_id":"8e917275-16d5-11f0-9cad-fee255fa62e0","name":"The moleculaR mEchAnismS Of dNa methylatIon reprogrammiNg in Arabidopsis sexual lineaGe","grant_number":"101153710"},{"_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","grant_number":"101034413","name":"IST-BRIDGE: International postdoctoral program","call_identifier":"H2020"},{"call_identifier":"H2020","grant_number":"804981","name":"Establishment, modulation and inheritance of sexual lineage specific DNA methylation in plants","_id":"bdb51a6e-d553-11ed-ba76-c2025f3d5725"},{"grant_number":"101126201","name":"Mechanisms and biological functions of H3K27me3 reprogramming in plant microspores","_id":"7c012eb8-9f16-11ee-852c-dc2b6371d5a0"}],"researchdata_availability":"yes","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"file_id":"23204","date_created":"2026-10-28T08:41:06Z","content_type":"application/pdf","creator":"dernst","checksum":"f24efcba89d880d48fef04b780923780","file_name":"2026_NatureComm_Long.pdf","file_size":4220128,"access_level":"open_access","date_updated":"2026-10-28T08:41:06Z","relation":"main_file","success":1}],"OA_type":"gold","scopus_import":"1","dataavailabilitystatement":"Illumina sequencing data (RIP-seq, BS-seq, and RNA-seq) generated in this study have been deposited in the NCBI BioProject and are accessible under accession number PRJNA1192978. Published BS-seq data of Arabidopsis meiocyte used in this study for Fig. 4a are available in the NCBI GEO database under accession code GSE161625. All custom codes are available via the request to the corresponding author.","date_updated":"2026-10-28T08:43:20Z","DOAJ_listed":"1","author":[{"full_name":"Long, Jincheng","first_name":"Jincheng","last_name":"Long"},{"first_name":"Chao","last_name":"Yang","id":"082e3e6e-8069-11ed-8390-c8cce7b1aaca","full_name":"Yang, Chao"},{"last_name":"Xu","first_name":"Shujuan","full_name":"Xu, Shujuan","id":"9724dd9d-f591-11ee-bd51-e97ed0652286"},{"first_name":"Joke G","last_name":"De Jaeger-Braet","id":"26bd38d3-c59a-11ee-a1af-d7a988cafcc5","full_name":"De Jaeger-Braet, Joke G"},{"first_name":"Wenjing","last_name":"She","full_name":"She, Wenjing"},{"last_name":"Ono","first_name":"Seijiro","full_name":"Ono, Seijiro"},{"full_name":"Walker, James","first_name":"James","last_name":"Walker"},{"first_name":"Ygor","last_name":"de Souza Vieira","id":"af019b77-d2a9-11f1-9e65-c47a5932b764","full_name":"de Souza Vieira, Ygor"},{"full_name":"Schnittger, Arp","last_name":"Schnittger","first_name":"Arp"},{"first_name":"Xiaoqi","last_name":"Feng","id":"e0164712-22ee-11ed-b12a-d80fcdf35958","full_name":"Feng, Xiaoqi","orcid":"0000-0002-4008-1234"}],"language":[{"iso":"eng"}],"abstract":[{"text":"Small RNAs (sRNAs) are widespread across diverse flowering plant species and play important roles regulating reproduction and environmental responses. However, how sRNAs exert their function is largely unknown, likely due to their typical origin in non-genic regions, the lack of distinct gene targets, and the sparse characterization of their associated Argonaute (AGO) effector proteins. Here we show that Arabidopsis male reproductive sRNAs associate with AGO4, 5, 6 and 9, all of which are enriched in meiocytes along with RNA Polymerase V (Pol V). This enables these sRNAs to methylate loci with imperfect sequence homology. AGO4, AGO6 and AGO9 predominantly load 24-nucleotide (nt) Pol IV-derived sRNAs and mediate DNA methylation in meiocytes in a dosage-dependent manner. Despite closer homology to microRNA-associated AGO1 and AGO10, AGO5 primarily binds CLSY3- and Pol IV-derived 21-24 nt sRNAs. Transcriptomic and methylomic analyses of meiocytes from single and compound ago mutants demonstrate distinct yet complementary roles of AGO4/6/9 and AGO5 in regulating protein-coding genes and silencing transposons in the germline. These molecular disruptions are accompanied by significant meiotic defects. Together, our findings reveal how AGO4/6/9-mediated DNA methylation and AGO5, likely acting through post-transcriptional gene silencing, work together to promote male germline development.","lang":"eng"}],"OA_place":"publisher","type":"journal_article","status":"public","quality_controlled":"1","PlanS_conform":"1","oa_version":"Published Version","citation":{"apa":"Long, J., Yang, C., Xu, S., De Jaeger-Braet, J. G., She, W., Ono, S., … Feng, X. (2026). Multiple Argonaute complexes orchestrate epigenetic silencing in the Arabidopsis germline. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-026-77326-1\">https://doi.org/10.1038/s41467-026-77326-1</a>","chicago":"Long, Jincheng, Chao Yang, Shujuan Xu, Joke G De Jaeger-Braet, Wenjing She, Seijiro Ono, James Walker, Ygor de Souza Vieira, Arp Schnittger, and Xiaoqi Feng. “Multiple Argonaute Complexes Orchestrate Epigenetic Silencing in the Arabidopsis Germline.” <i>Nature Communications</i>. Springer Nature, 2026. <a href=\"https://doi.org/10.1038/s41467-026-77326-1\">https://doi.org/10.1038/s41467-026-77326-1</a>.","mla":"Long, Jincheng, et al. “Multiple Argonaute Complexes Orchestrate Epigenetic Silencing in the Arabidopsis Germline.” <i>Nature Communications</i>, vol. 17, 10758, Springer Nature, 2026, doi:<a href=\"https://doi.org/10.1038/s41467-026-77326-1\">10.1038/s41467-026-77326-1</a>.","short":"J. Long, C. Yang, S. Xu, J.G. De Jaeger-Braet, W. She, S. Ono, J. Walker, Y. de Souza Vieira, A. Schnittger, X. Feng, Nature Communications 17 (2026).","ama":"Long J, Yang C, Xu S, et al. Multiple Argonaute complexes orchestrate epigenetic silencing in the Arabidopsis germline. <i>Nature Communications</i>. 2026;17. doi:<a href=\"https://doi.org/10.1038/s41467-026-77326-1\">10.1038/s41467-026-77326-1</a>","ieee":"J. Long <i>et al.</i>, “Multiple Argonaute complexes orchestrate epigenetic silencing in the Arabidopsis germline,” <i>Nature Communications</i>, vol. 17. Springer Nature, 2026.","ista":"Long J, Yang C, Xu S, De Jaeger-Braet JG, She W, Ono S, Walker J, de Souza Vieira Y, Schnittger A, Feng X. 2026. Multiple Argonaute complexes orchestrate epigenetic silencing in the Arabidopsis germline. Nature Communications. 17, 10758."},"date_published":"2026-10-14T00:00:00Z","pmid":1,"publisher":"Springer Nature","month":"10","ddc":["580"],"file_date_updated":"2026-10-28T08:41:06Z","intvolume":"        17","acknowledgement":"We thank Michael J. Axtell for generously sharing ago4-4 ago6-2, ago6-2 ago9-1 double and ago4-4 ago6-2 ago9-1 triple mutants. We thank the John Innes Centre Bioimaging Facility and ISTA Imaging and Optics Facility for their assistance with the confocal microscopy, and the ISTA Scientific Computing Facility for high performance computing resources. This work was funded by a Marie Curie Postdoctoral Fellowship (101153710; C.Y.), a European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 101034413 (ISTA Bridge Fellowship) (S.X.), a DFG grant (FOR 5235 CSCS; A.S.), a European Research Council (ERC) Starting Grant (804981; X.F) and an ERC Consolidator Grant (101126201; C.Y. and XF).","article_number":"10758","publication_status":"published","year":"2026","publication":"Nature Communications","date_created":"2026-10-27T10:38:56Z"},{"oa":1,"doi":"10.3847/1538-4357/ae9eb7","file":[{"checksum":"6968c85ac6ccc997a30dab818dc04e42","creator":"dernst","file_size":4194012,"file_name":"2026_AstrophysicalJour_Stephenson.pdf","date_created":"2026-10-28T08:02:57Z","file_id":"23202","content_type":"application/pdf","relation":"main_file","date_updated":"2026-10-28T08:02:57Z","success":1,"access_level":"open_access"}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"issue":"2","article_processing_charge":"Yes","das_tickbox":"0","external_id":{"arxiv":["2608.23846"]},"article_type":"original","has_accepted_license":"1","volume":1010,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","title":"The evolution of low-ionization electron densities in galaxies across cosmic epochs","_id":"23200","day":"15","arxiv":1,"publication_identifier":{"eissn":["1538-4357"],"issn":["0004-637X"]},"fulldoi":"https://doi.org/10.3847/1538-4357/ae9eb7","department":[{"_id":"JoMa"}],"publication_status":"published","year":"2026","publication":"The Astrophysical Journal","date_created":"2026-10-27T10:40:40Z","file_date_updated":"2026-10-28T08:02:57Z","intvolume":"      1010","acknowledgement":"We are grateful for the support for programs GO 1871, GO 1895, and GO 3577 provided by NASA through a grant from the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-03127. This work is based in part on observations made with the NASA/ESA/CSA JWST. The data were obtained from the Mikulski Archive for Space Telescopes at the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-03127 for JWST. These observations are associated with programs GO 1324, GO 1871, GO 1895 and GO 3577. The specific observations analyzed can be accessed via DOI: 10.17909/01dt-fm17.\r\n\r\nA.S.L. acknowledges support from Knut and Alice Wallenberg Foundation. T.A.H. acknowledges support from an appointment to the NASA Postdoctoral Program at the NASA Goddard Space, administered by Oak Ridge Associated Universities under contract with NASA, as well as the University of Maryland Baltimore County and the Center for Space Sciences and Technology. N.G.G. and Y.I.I. and acknowledge support from the joint Ukrainian-Swiss project No. 224866. This work has received funding from the Swiss State Secretariat for Education, Research, and Innovation (SERI) under contract number MB22.00072, as well as from the Swiss National Science Foundation (SNSF) through project grant 200020_207349. The Cosmic Dawn Center (DAWN) is funded by the Danish National Research Foundation under grant DNRF140.\r\n\r\nFacility: JWST (NIRCam - , NIRSpec).\r\n\r\nSoftware: numpy (v.1.24.3; C. R. Harris et al. 2020), scipy (v.1.13.1; P. Virtanen et al. 2020), astropy (Astropy Collaboration et al. 2013, 2018, 2022), pyneb (v.1.1.24; V. Luridiana et al. 2013, 2015; C. Morisset et al. 2020), msaexp (v.0.8.4; G. B. Brammer 2022), msafit (A. de Graaff et al. 2024), grizli (G. Brammer 2018), EAZY (G. B. Brammer et al. 2008), BAGPIPES (A. C. Carnall et al. 2018), Prospector (B. D. Johnson et al. 2019, 2021), pysersic (I. Pasha & T. B. Miller 2023), GALFIT (C. Y. Peng et al. 2002, 2010), kendall (S. R. Flury et al. 2022; S. R. Flury 2023).","article_number":"184","date_published":"2026-10-15T00:00:00Z","publisher":"IOP Publishing","ddc":["520"],"month":"10","oa_version":"Published Version","citation":{"apa":"Stephenson, M. G., Chisholm, J., Saldana-Lopez, A., Matthee, J. J., Henry, A., Naidu, R. P., … Schaerer, D. (2026). The evolution of low-ionization electron densities in galaxies across cosmic epochs. <i>The Astrophysical Journal</i>. IOP Publishing. <a href=\"https://doi.org/10.3847/1538-4357/ae9eb7\">https://doi.org/10.3847/1538-4357/ae9eb7</a>","mla":"Stephenson, Mabel G., et al. “The Evolution of Low-Ionization Electron Densities in Galaxies across Cosmic Epochs.” <i>The Astrophysical Journal</i>, vol. 1010, no. 2, 184, IOP Publishing, 2026, doi:<a href=\"https://doi.org/10.3847/1538-4357/ae9eb7\">10.3847/1538-4357/ae9eb7</a>.","chicago":"Stephenson, Mabel G., John Chisholm, A. Saldana-Lopez, Jorryt J Matthee, Alaina Henry, Rohan P. Naidu, Sophia R. Flury, et al. “The Evolution of Low-Ionization Electron Densities in Galaxies across Cosmic Epochs.” <i>The Astrophysical Journal</i>. IOP Publishing, 2026. <a href=\"https://doi.org/10.3847/1538-4357/ae9eb7\">https://doi.org/10.3847/1538-4357/ae9eb7</a>.","short":"M.G. Stephenson, J. Chisholm, A. Saldana-Lopez, J.J. Matthee, A. Henry, R.P. Naidu, S.R. Flury, T.A. Hutchison, S.L. Finkelstein, N.G. Guseva, Y.I. Izotov, R. Marques-Chaves, P.A. Oesch, N.A. Reddy, D. Schaerer, The Astrophysical Journal 1010 (2026).","ama":"Stephenson MG, Chisholm J, Saldana-Lopez A, et al. The evolution of low-ionization electron densities in galaxies across cosmic epochs. <i>The Astrophysical Journal</i>. 2026;1010(2). doi:<a href=\"https://doi.org/10.3847/1538-4357/ae9eb7\">10.3847/1538-4357/ae9eb7</a>","ieee":"M. G. Stephenson <i>et al.</i>, “The evolution of low-ionization electron densities in galaxies across cosmic epochs,” <i>The Astrophysical Journal</i>, vol. 1010, no. 2. IOP Publishing, 2026.","ista":"Stephenson MG, Chisholm J, Saldana-Lopez A, Matthee JJ, Henry A, Naidu RP, Flury SR, Hutchison TA, Finkelstein SL, Guseva NG, Izotov YI, Marques-Chaves R, Oesch PA, Reddy NA, Schaerer D. 2026. The evolution of low-ionization electron densities in galaxies across cosmic epochs. The Astrophysical Journal. 1010(2), 184."},"status":"public","quality_controlled":"1","PlanS_conform":"1","language":[{"iso":"eng"}],"abstract":[{"text":"We investigate the low-ionization electron density in the interstellar medium (ISM) of galaxies across 0 < z < 8,\r\nderived with the [O II] λλ3727, 3730 and [S II] λλ6718, 6733 doublets, using both deep JWST/NIRCam/grism\r\nand NIRSpec/MSA spectroscopy. Along with ancillary density samples from the literature at 0 < z < 6, we\r\nassemble three samples containing a total of 703 galaxies spanning 3.7 < z < 7.8 at 〈z〉 ∼ 5.6; 691 galaxies in the\r\nluminosity-complete NIRCam/grism programs CONGRESS and FRESCO at 〈z〉 ∼ 4.3 and ∼5.3, respectively;\r\nand 12 galaxies with high-resolution NIRSpec/MSA spectra from the GO 1871 and GLASS programs. We find\r\nmedian electron densities of ne[S II] = + 463 203 cm 281 3\r\nfor CONGRESS, ne[S II] = + 301 206 cm 388 3\r\nfor FRESCO, and\r\nne[O II] = + 202 102 cm 145 3\r\nfor the NIRSpec/MSA sample. The median low-ionization ne increases from z = 0 to 4,\r\nin agreement with previous studies and those using JWST observations. However, beyond z ∼ 4 median ne begins\r\nto deviate from a monotonically increasing evolution with z. We find a positive, but shallow, correlation between\r\nO32 (a proxy for the ionization parameter) and ne, while also confirming a positive correlation between O32 and z.\r\nWe suggest that these trends are possibly due to an evolving ISM gas density and ionization structure, and\r\npropose a toy model where the gas clumping evolves with z to explain the observed density and ionization\r\nvariations.","lang":"eng"}],"OA_place":"publisher","type":"journal_article","DOAJ_listed":"1","author":[{"last_name":"Stephenson","first_name":"Mabel G.","full_name":"Stephenson, Mabel G."},{"full_name":"Chisholm, John","last_name":"Chisholm","first_name":"John"},{"full_name":"Saldana-Lopez, A.","last_name":"Saldana-Lopez","first_name":"A."},{"orcid":"0000-0003-2871-127X","first_name":"Jorryt J","last_name":"Matthee","id":"7439a258-f3c0-11ec-9501-9df22fe06720","full_name":"Matthee, Jorryt J"},{"full_name":"Henry, Alaina","last_name":"Henry","first_name":"Alaina"},{"first_name":"Rohan P.","last_name":"Naidu","full_name":"Naidu, Rohan P."},{"full_name":"Flury, Sophia R.","first_name":"Sophia R.","last_name":"Flury"},{"full_name":"Hutchison, Taylor A.","first_name":"Taylor A.","last_name":"Hutchison"},{"last_name":"Finkelstein","first_name":"Steven L.","full_name":"Finkelstein, Steven L."},{"first_name":"Natalia G.","last_name":"Guseva","full_name":"Guseva, Natalia G."},{"first_name":"Yuri I.","last_name":"Izotov","full_name":"Izotov, Yuri I."},{"last_name":"Marques-Chaves","first_name":"Rui","full_name":"Marques-Chaves, Rui"},{"full_name":"Oesch, Pascal A.","last_name":"Oesch","first_name":"Pascal A."},{"full_name":"Reddy, Naveen A.","last_name":"Reddy","first_name":"Naveen A."},{"first_name":"Daniel","last_name":"Schaerer","full_name":"Schaerer, Daniel"}],"OA_type":"gold","scopus_import":"1","date_updated":"2026-10-28T08:05:42Z"},{"publication_status":"published","date_created":"2026-10-27T10:39:59Z","publication":"Monthly Notices of the Royal Astronomical Society","year":"2026","file_date_updated":"2026-10-28T08:19:16Z","intvolume":"       552","acknowledgement":"JHM and ELE acknowledge funding from a Royal Society University Research Fellowship (URF\\R1\\221062). AJC acknowledges support from the Oxford Hintze Centre for Astrophysical Surveys, which is funded through generous support from the Hintze Family Charitable Foundation. HW acknowledges funding by the Science and Technology Facilities Council Grant Number ST/W000903/1 and the ISTA-Fellow programme. The authors acknowledge the use of resources provided by the Isambard 3 Tier-2 HPC Facility. Isambard 3 is hosted by the University of Bristol and operated by the GW4 Alliance (https://gw4.ac.uk) and is funded by UK Research and Innovation and the Engineering and Physical Sciences Research Council (EP/X039137/1). The authors would like to acknowledge the use of the University of Oxford Advanced Research Computing (ARC) facility in carrying out this work (https://doi.org/10.5281/zenodo.22558). We are grateful for the use of the following software packages: pluto (A. Mignone et al. 2007) and matplotlib (J. D. Hunter 2007). We are grateful to Dipanjan Mukherjee, Imogen Whittam, Matt Jarvis, Judith Croston and Fraser Cowie for useful discussions. The authors wish to thank the anonymous referee for their helpful and constructive comments which have improved the quality of this manuscript.","article_number":"stag1798","date_published":"2026-11-01T00:00:00Z","publisher":"Oxford University Press","month":"11","ddc":["520"],"citation":{"mla":"Elley, Emma L., et al. “The Impact of Flickering Variability and Magnetization on the Dynamics, Stability, and Morphology of Radio-Loud AGN Jets.” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 552, no. 4, stag1798, Oxford University Press, 2026, doi:<a href=\"https://doi.org/10.1093/mnras/stag1798\">10.1093/mnras/stag1798</a>.","chicago":"Elley, Emma L, James H Matthews, Henry William Whitehead, and Alex J Cooper. “The Impact of Flickering Variability and Magnetization on the Dynamics, Stability, and Morphology of Radio-Loud AGN Jets.” <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press, 2026. <a href=\"https://doi.org/10.1093/mnras/stag1798\">https://doi.org/10.1093/mnras/stag1798</a>.","apa":"Elley, E. L., Matthews, J. H., Whitehead, H. W., &#38; Cooper, A. J. (2026). The impact of flickering variability and magnetization on the dynamics, stability, and morphology of radio-loud AGN jets. <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/mnras/stag1798\">https://doi.org/10.1093/mnras/stag1798</a>","short":"E.L. Elley, J.H. Matthews, H.W. Whitehead, A.J. Cooper, Monthly Notices of the Royal Astronomical Society 552 (2026).","ista":"Elley EL, Matthews JH, Whitehead HW, Cooper AJ. 2026. The impact of flickering variability and magnetization on the dynamics, stability, and morphology of radio-loud AGN jets. Monthly Notices of the Royal Astronomical Society. 552(4), stag1798.","ieee":"E. L. Elley, J. H. Matthews, H. W. Whitehead, and A. J. Cooper, “The impact of flickering variability and magnetization on the dynamics, stability, and morphology of radio-loud AGN jets,” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 552, no. 4. Oxford University Press, 2026.","ama":"Elley EL, Matthews JH, Whitehead HW, Cooper AJ. The impact of flickering variability and magnetization on the dynamics, stability, and morphology of radio-loud AGN jets. <i>Monthly Notices of the Royal Astronomical Society</i>. 2026;552(4). doi:<a href=\"https://doi.org/10.1093/mnras/stag1798\">10.1093/mnras/stag1798</a>"},"oa_version":"Published Version","quality_controlled":"1","status":"public","PlanS_conform":"1","language":[{"iso":"eng"}],"abstract":[{"lang":"eng","text":"The physics governing the morphology of radio-loud active galactic nucleus (AGN) jets is not fully understood. We investigate how magnetization, flickering jet power and the interplay between them affects the morphology of radio galaxies. We present a grid of relativistic magnetohydrodynamic simulations using the pluto code covering constant and variable jets with two levels of magnetization. We find that the constant high-magnetization jets can lead to highly asymmetrical cocoon morphologies, while the variable high-magnetization jet can exhibit a broken morphology, caused by a discontinuous jet beam. Our work highlights the importance of magnetization and variability on the stability and resulting morphology of radio-loud AGN jets, suggesting both are significant factors in addition to jet power or environment. Furthermore, we show that the interaction between magnetization and variability can lead to the development of localized kink instabilities along the jet beam. Finally, we discuss the effects of hydrodynamic mixing in low-magnetization jets and the role of viewing-angle dependence in comparisons between our simulations and observed sources. To facilitate this comparison we present a library of simulated radio images at different times in the simulations and from various viewing angles, which highlight a diverse set of complex morphologies."}],"OA_place":"publisher","type":"journal_article","DOAJ_listed":"1","author":[{"full_name":"Elley, Emma L","first_name":"Emma L","last_name":"Elley"},{"full_name":"Matthews, James H","last_name":"Matthews","first_name":"James H"},{"id":"b5363ed7-0345-11f1-8029-eef7ff5d6bfc","full_name":"Whitehead, Henry William","first_name":"Henry William","last_name":"Whitehead","orcid":"0009-0006-0716-0965"},{"first_name":"Alex J","last_name":"Cooper","full_name":"Cooper, Alex J"}],"scopus_import":"1","OA_type":"gold","dataavailabilitystatement":"The data underlying this article are available from the authors on reasonable request. Furthermore, the data for the simulated radio images from various angles as discussed in Section 2.3 are publicly available as FITS files from https://doi.org/10.5281/zenodo.20140021.","date_updated":"2026-10-28T08:19:37Z","oa":1,"doi":"10.1093/mnras/stag1798","researchdata_availability":"upon request","file":[{"file_id":"23203","date_created":"2026-10-28T08:19:16Z","content_type":"application/pdf","checksum":"57e15f531d22d18eaeca96d58b2ab911","creator":"dernst","file_name":"2026_MonthNoticesRAS_Elley.pdf","file_size":8344810,"access_level":"open_access","relation":"main_file","date_updated":"2026-10-28T08:19:16Z","success":1}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"issue":"4","article_processing_charge":"Yes","das_tickbox":"1","external_id":{"arxiv":["2605.13469"]},"article_type":"original","has_accepted_license":"1","volume":552,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","title":"The impact of flickering variability and magnetization on the dynamics, stability, and morphology of radio-loud AGN jets","_id":"23199","arxiv":1,"day":"01","publication_identifier":{"eissn":["1365-2966"],"issn":["0035-8711"]},"supplementarymaterial":"yes","fulldoi":"https://doi.org/10.1093/mnras/stag1798","department":[{"_id":"ZoHa"}]},{"oa_version":"None","citation":{"short":"P.A. Mor, A.R. Kroo, C.G. Valdez, M. Šimić, A. Karnieli, G. Cavicchioli, Z. Sun, V. Grimaldi, S. Fan, O. Solgaard, D.A.B. Miller, C. Roques-Carmes, in:, CLEO Science and Innovations Proceedings, Optica Publishing Group, 2026.","apa":"Mor, P. A., Kroo, A. R., Valdez, C. G., Šimić, M., Karnieli, A., Cavicchioli, G., … Roques-Carmes, C. (2026). Variational processing of partially coherent light in a photonic integrated circuit. In <i>CLEO Science and Innovations Proceedings</i>. Long Beach, CA, United States: Optica Publishing Group. <a href=\"https://doi.org/10.1364/CLEO_SI.2026.STU2F.1\">https://doi.org/10.1364/CLEO_SI.2026.STU2F.1</a>","mla":"Mor, Paul Alexis, et al. “Variational Processing of Partially Coherent Light in a Photonic Integrated Circuit.” <i>CLEO Science and Innovations Proceedings</i>, STU2F.1, Optica Publishing Group, 2026, doi:<a href=\"https://doi.org/10.1364/CLEO_SI.2026.STU2F.1\">10.1364/CLEO_SI.2026.STU2F.1</a>.","chicago":"Mor, Paul Alexis, Annie R. Kroo, Carson G. Valdez, Marko Šimić, Aviv Karnieli, Gabriele Cavicchioli, Zhanghao Sun, et al. “Variational Processing of Partially Coherent Light in a Photonic Integrated Circuit.” In <i>CLEO Science and Innovations Proceedings</i>. Optica Publishing Group, 2026. <a href=\"https://doi.org/10.1364/CLEO_SI.2026.STU2F.1\">https://doi.org/10.1364/CLEO_SI.2026.STU2F.1</a>.","ama":"Mor PA, Kroo AR, Valdez CG, et al. Variational processing of partially coherent light in a photonic integrated circuit. In: <i>CLEO Science and Innovations Proceedings</i>. Optica Publishing Group; 2026. doi:<a href=\"https://doi.org/10.1364/CLEO_SI.2026.STU2F.1\">10.1364/CLEO_SI.2026.STU2F.1</a>","ieee":"P. A. Mor <i>et al.</i>, “Variational processing of partially coherent light in a photonic integrated circuit,” in <i>CLEO Science and Innovations Proceedings</i>, Long Beach, CA, United States, 2026.","ista":"Mor PA, Kroo AR, Valdez CG, Šimić M, Karnieli A, Cavicchioli G, Sun Z, Grimaldi V, Fan S, Solgaard O, Miller DAB, Roques-Carmes C. 2026. Variational processing of partially coherent light in a photonic integrated circuit. CLEO Science and Innovations Proceedings. CLEO: Conference on Lasers and Electro-Optics, Technical Digest Series, , STU2F.1."},"publisher":"Optica Publishing Group","month":"05","date_published":"2026-05-15T00:00:00Z","article_processing_charge":"No","alternative_title":["Technical Digest Series"],"article_number":"STU2F.1","conference":{"name":"CLEO: Conference on Lasers and Electro-Optics","location":"Long Beach, CA, United States","start_date":"2026-05-02","end_date":"2026-05-06"},"doi":"10.1364/CLEO_SI.2026.STU2F.1","publication_status":"published","date_created":"2026-10-25T23:02:24Z","year":"2026","publication":"CLEO Science and Innovations Proceedings","department":[{"_id":"ChRo"}],"fulldoi":"https://doi.org/10.1364/CLEO_SI.2026.STU2F.1","scopus_import":"1","OA_type":"closed access","date_updated":"2026-10-28T07:57:55Z","publication_identifier":{"isbn":["9781957171586"]},"author":[{"last_name":"Mor","first_name":"Paul Alexis","full_name":"Mor, Paul Alexis"},{"first_name":"Annie R.","last_name":"Kroo","full_name":"Kroo, Annie R."},{"full_name":"Valdez, Carson G.","last_name":"Valdez","first_name":"Carson G."},{"last_name":"Šimić","first_name":"Marko","full_name":"Šimić, Marko"},{"first_name":"Aviv","last_name":"Karnieli","full_name":"Karnieli, Aviv"},{"full_name":"Cavicchioli, Gabriele","first_name":"Gabriele","last_name":"Cavicchioli"},{"full_name":"Sun, Zhanghao","last_name":"Sun","first_name":"Zhanghao"},{"full_name":"Grimaldi, Vittorio","last_name":"Grimaldi","first_name":"Vittorio"},{"full_name":"Fan, Shanhui","first_name":"Shanhui","last_name":"Fan"},{"full_name":"Solgaard, Olav","last_name":"Solgaard","first_name":"Olav"},{"full_name":"Miller, David A.B.","first_name":"David A.B.","last_name":"Miller"},{"last_name":"Roques-Carmes","first_name":"Charles","full_name":"Roques-Carmes, Charles","id":"e2e68fc9-6505-11ef-a541-eb4e72cc3e82"}],"day":"15","_id":"23196","type":"conference","title":"Variational processing of partially coherent light in a photonic integrated circuit","language":[{"iso":"eng"}],"abstract":[{"text":"We introduce an experimental realization of the measurement, processing, and generation of partially coherent light on a photonic chip. This device relies on self-configuring networks optimized sequentially to learn the coherency matrix of input light.","lang":"eng"}],"status":"public","quality_controlled":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"},{"file":[{"file_size":612317,"file_name":"2026_EuropJourAppliedMath_Portinale.pdf","checksum":"d038f4d00cbfbde2672c17138eab21c9","creator":"dernst","content_type":"application/pdf","file_id":"22386","date_created":"2026-07-23T05:55:03Z","success":1,"date_updated":"2026-07-23T05:55:03Z","relation":"main_file","access_level":"open_access"}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"researchdata_availability":"no","keyword":["optimal transport","discrete-to-continuum","homogenisation","linear growth","gamma-convergence"],"oa":1,"doi":"10.1017/s0956792524000810","project":[{"name":"Taming Complexity in Partial Differential Systems","grant_number":"F6504","_id":"fc31cba2-9c52-11eb-aca3-ff467d239cd2"}],"issue":"3","external_id":{"isi":["001381435800001"]},"article_type":"original","das_tickbox":"0","article_processing_charge":"Yes","has_accepted_license":"1","volume":37,"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","_id":"18706","title":"Discrete-to-continuum limits of optimal transport with linear growth on periodic graphs","publication_identifier":{"eissn":["1469-4425"],"issn":["0956-7925"]},"page":"614-642","day":"01","department":[{"_id":"GradSch"},{"_id":"JaMa"}],"fulldoi":"https://doi.org/10.1017/s0956792524000810","supplementarymaterial":"no","publication":"European Journal of Applied Mathematics","date_created":"2024-12-23T11:03:59Z","year":"2026","publication_status":"published","isi":1,"acknowledgement":"L.P. gratefully acknowledges fundings from the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany’s Excellence Strategy – GZ 2047/1, Projekt-ID 390685813. F.Q. gratefully acknowledges support from the Austrian Science Fund (FWF) project 10.55776/F65.","intvolume":"        37","file_date_updated":"2026-07-23T05:55:03Z","ddc":["500"],"month":"06","publisher":"Cambridge University Press","date_published":"2026-06-01T00:00:00Z","oa_version":"Published Version","citation":{"ama":"Portinale L, Quattrocchi F. Discrete-to-continuum limits of optimal transport with linear growth on periodic graphs. <i>European Journal of Applied Mathematics</i>. 2026;37(3):614-642. doi:<a href=\"https://doi.org/10.1017/s0956792524000810\">10.1017/s0956792524000810</a>","ieee":"L. Portinale and F. Quattrocchi, “Discrete-to-continuum limits of optimal transport with linear growth on periodic graphs,” <i>European Journal of Applied Mathematics</i>, vol. 37, no. 3. Cambridge University Press, pp. 614–642, 2026.","ista":"Portinale L, Quattrocchi F. 2026. Discrete-to-continuum limits of optimal transport with linear growth on periodic graphs. European Journal of Applied Mathematics. 37(3), 614–642.","apa":"Portinale, L., &#38; Quattrocchi, F. (2026). Discrete-to-continuum limits of optimal transport with linear growth on periodic graphs. <i>European Journal of Applied Mathematics</i>. Cambridge University Press. <a href=\"https://doi.org/10.1017/s0956792524000810\">https://doi.org/10.1017/s0956792524000810</a>","mla":"Portinale, Lorenzo, and Filippo Quattrocchi. “Discrete-to-Continuum Limits of Optimal Transport with Linear Growth on Periodic Graphs.” <i>European Journal of Applied Mathematics</i>, vol. 37, no. 3, Cambridge University Press, 2026, pp. 614–42, doi:<a href=\"https://doi.org/10.1017/s0956792524000810\">10.1017/s0956792524000810</a>.","chicago":"Portinale, Lorenzo, and Filippo Quattrocchi. “Discrete-to-Continuum Limits of Optimal Transport with Linear Growth on Periodic Graphs.” <i>European Journal of Applied Mathematics</i>. Cambridge University Press, 2026. <a href=\"https://doi.org/10.1017/s0956792524000810\">https://doi.org/10.1017/s0956792524000810</a>.","short":"L. Portinale, F. Quattrocchi, European Journal of Applied Mathematics 37 (2026) 614–642."},"PlanS_conform":"1","status":"public","quality_controlled":"1","type":"journal_article","OA_place":"publisher","abstract":[{"lang":"eng","text":"We prove discrete-to-continuum convergence for dynamical optimal transport on  Zd\r\n -periodic graphs with cost functional having linear growth at infinity. This result provides an answer to a problem left open by Gladbach, Kopfer, Maas, and Portinale (Calc Var Partial Differential Equations 62(5), 2023), where the convergence behaviour of discrete boundary-value dynamical transport problems is proved under the stronger assumption of superlinear growth. Our result extends the known literature to some important classes of examples, such as scaling limits of  1 -Wasserstein transport problems. Similarly to what happens in the quadratic case, the geometry of the graph plays a crucial role in the structure of the limit cost function, as we discuss in the final part of this work, which includes some visual representations."}],"related_material":{"record":[{"status":"public","relation":"dissertation_contains","id":"20563"}]},"language":[{"iso":"eng"}],"author":[{"last_name":"Portinale","first_name":"Lorenzo","full_name":"Portinale, Lorenzo","id":"30AD2CBC-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Filippo","last_name":"Quattrocchi","id":"3ebd6ba8-edfb-11eb-afb5-91a9745ba308","full_name":"Quattrocchi, Filippo","orcid":"0009-0000-9773-1931"}],"DOAJ_listed":"1","date_updated":"2026-11-10T23:31:08Z","scopus_import":"1","OA_type":"gold"},{"_id":"21423","title":"Geometry-driven self-organization of migrating cells and chiral filaments","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","department":[{"_id":"GradSch"},{"_id":"EdHa"}],"degree_awarded":"PhD","fulldoi":"https://doi.org/10.15479/AT-ISTA-21423","acknowledged_ssus":[{"_id":"ScienComp"}],"day":"11","publication_identifier":{"issn":["2663-337X"],"isbn":["978-3-99078-076-3"]},"page":"110","supervisor":[{"orcid":"0000-0001-6005-1561","first_name":"Edouard B","last_name":"Hannezo","id":"3A9DB764-F248-11E8-B48F-1D18A9856A87","full_name":"Hannezo, Edouard B"}],"corr_author":"1","file":[{"creator":"zdunajov","checksum":"47ce6a48a0c63f28eca6e64c9ffd2c84","file_size":14662770,"file_name":"2026_Dunajova_Zuzana_Thesis_pdfA.pdf","date_created":"2026-03-12T20:38:52Z","file_id":"21446","content_type":"application/pdf","relation":"main_file","date_updated":"2026-09-11T22:30:02Z","embargo":"2026-09-11","access_level":"open_access"},{"embargo_to":"open_access","relation":"source_file","date_updated":"2026-09-11T22:30:02Z","access_level":"closed","file_size":32961408,"file_name":"Thesis-Dunajova_source_file.docx","creator":"zdunajov","checksum":"5dec5afdffd47c2b0b162d0fe1bed925","content_type":"application/vnd.openxmlformats-officedocument.wordprocessingml.document","file_id":"21447","date_created":"2026-03-12T20:40:18Z"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode","image":"/images/cc_by_nc_sa.png","name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)","short":"CC BY-NC-SA (4.0)"},"doi":"10.15479/AT-ISTA-21423","project":[{"_id":"34d75525-11ca-11ed-8bc3-89b6307fee9d","grant_number":"26360","name":"Motile active matter models of migrating cells and chiral filaments"}],"oa":1,"has_accepted_license":"1","alternative_title":["ISTA Thesis"],"article_processing_charge":"No","type":"dissertation","OA_place":"repository","abstract":[{"lang":"eng","text":"Biological systems, such as cytoskeletal filaments and multicellular collectives, exhibit rich \r\nself-organization driven by their intrinsic activity and physical constraints. Across scales, \r\ngeometry plays a central role: the shape of active units and the structure of their environment \r\nstrongly influence how order emerges in these far-from-equilibrium systems. In this thesis, \r\nwe combine minimal active-matter models with bottom-up in vitro experiments to identify \r\nthe principles by which geometry and activity shape collective behavior in biological matter. \r\nAt the subcellular scale, we investigate how the physical properties of chiral FtsZ filaments \r\ngovern their large-scale organization. Using a mesoscopic model validated by reconstituted \r\nfilament assays, we show that filament shape, intrinsic curvature, and flexibility, together with \r\nactivity-driven straightening, determine whether filaments form chiral rings, polar bands, or \r\nnematic-like states. Our model shows that small changes in filament mechanics produce large \r\nshifts in collective structures, revealing how the geometry of individual filaments amplifies \r\nthrough activity to control patterns relevant for bacterial cytokinesis. \r\nAt the cellular scale, we examine how geometry of the external environment influences \r\ncollective cancer cell migration. Experiments in controlled microfabricated obstacle \r\nenvironments demonstrate that geometric disorder alone can induce a transition from \r\ncollective to single-cell invasion. A minimal model of active particles in disordered geometries \r\nreproduces these effects, demonstrating that cell dissemination results both from local \r\ngeometrical constraints and a global integration of spatial disorder over time. Surprisingly, \r\nthis transition is accompanied by a change in the universality class of interface dynamics, \r\nrevealing that cell-environment interactions can shift the collective behavior of an invasive \r\nfront purely through mechanics.  \r\nIn the last system, we study how cell-intrinsic geometry and chirality affect collective motion \r\nin confined and unconfined settings. Using a minimal model inspired by in vitro experiments, \r\nwe analyze motile cells that exhibit persistent rotation due to intrinsic left-right asymmetry. \r\nIn circular confinement, this simplified chiral model reproduces several experimentally \r\nobserved features within specific parameter regimes. At high densities in unconfined \r\nenvironments, however, intrinsic chirality becomes masked even before the onset of the \r\njamming transition. These results show that single-cell geometric asymmetry does not \r\nnecessarily translate into large-scale chiral flows, offering new insight into how forces and \r\nsymmetries shape collective motion in dense cellular systems. \r\nOverall, this work uncovers how geometric constraints – embedded in the intrinsic \r\narchitecture of an active filament or encoded in the complexity of a microenvironment \r\ncouple to active forces to generate different classes of complex behaviors. "}],"related_material":{"record":[{"status":"public","id":"13314","relation":"part_of_dissertation"},{"status":"public","relation":"research_data","id":"13116"},{"id":"21439","relation":"research_data","status":"public"},{"status":"public","id":"21427","relation":"part_of_dissertation"}]},"language":[{"iso":"eng"}],"status":"public","date_updated":"2026-10-16T08:12:11Z","author":[{"last_name":"Dunajova","first_name":"Zuzana","full_name":"Dunajova, Zuzana","id":"4B39F286-F248-11E8-B48F-1D18A9856A87"}],"acknowledgement":"Finally, I gratefully acknowledge funding from the DOC Fellowship of the Austrian Academy\r\nof Sciences (OeAW): grant agreement 26360.","file_date_updated":"2026-09-11T22:30:02Z","year":"2026","date_created":"2026-03-11T08:30:49Z","publication_status":"published","doi_confirm":"1","oa_version":"Published Version","citation":{"ieee":"Z. Dunajova, “Geometry-driven self-organization of migrating cells and chiral filaments,” Institute of Science and Technology Austria, 2026.","ista":"Dunajova Z. 2026. Geometry-driven self-organization of migrating cells and chiral filaments. Institute of Science and Technology Austria.","ama":"Dunajova Z. Geometry-driven self-organization of migrating cells and chiral filaments. 2026. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-21423\">10.15479/AT-ISTA-21423</a>","mla":"Dunajova, Zuzana. <i>Geometry-Driven Self-Organization of Migrating Cells and Chiral Filaments</i>. Institute of Science and Technology Austria, 2026, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-21423\">10.15479/AT-ISTA-21423</a>.","chicago":"Dunajova, Zuzana. “Geometry-Driven Self-Organization of Migrating Cells and Chiral Filaments.” Institute of Science and Technology Austria, 2026. <a href=\"https://doi.org/10.15479/AT-ISTA-21423\">https://doi.org/10.15479/AT-ISTA-21423</a>.","apa":"Dunajova, Z. (2026). <i>Geometry-driven self-organization of migrating cells and chiral filaments</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-21423\">https://doi.org/10.15479/AT-ISTA-21423</a>","short":"Z. Dunajova, Geometry-Driven Self-Organization of Migrating Cells and Chiral Filaments, Institute of Science and Technology Austria, 2026."},"month":"03","ddc":["539","570"],"publisher":"Institute of Science and Technology Austria","license":"https://creativecommons.org/licenses/by-nc-sa/4.0/","date_published":"2026-03-11T00:00:00Z"},{"author":[{"last_name":"Dunajova","first_name":"Zuzana","full_name":"Dunajova, Zuzana","id":"4B39F286-F248-11E8-B48F-1D18A9856A87"}],"OA_type":"free access","date_updated":"2026-11-10T23:31:12Z","status":"public","related_material":{"record":[{"status":"public","id":"13314","relation":"used_in_publication"},{"status":"public","id":"21427","relation":"used_in_publication"},{"relation":"used_in_publication","id":"21423","status":"public"}]},"abstract":[{"lang":"eng","text":"These files contain supplementary movies accompanying the PhD thesis “Geometry-driven self-organization of migrating cells and chiral filaments” by Zuzana Dunajova (2026). The videos provide additional visual material supporting the experiments and results described in the thesis."}],"OA_place":"repository","type":"research_data","date_published":"2026-03-12T00:00:00Z","publisher":"Institute of Science and Technology Austria","ddc":["570"],"month":"03","citation":{"ama":"Dunajova Z. Supplementary movies to PhD thesis “Geometry-driven self-organization of migrating cells and chiral filaments.” 2026. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-21439\">10.15479/AT-ISTA-21439</a>","ista":"Dunajova Z. 2026. Supplementary movies to PhD thesis “Geometry-driven self-organization of migrating cells and chiral filaments”, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT-ISTA-21439\">10.15479/AT-ISTA-21439</a>.","ieee":"Z. Dunajova, “Supplementary movies to PhD thesis ‘Geometry-driven self-organization of migrating cells and chiral filaments.’” Institute of Science and Technology Austria, 2026.","short":"Z. Dunajova, (2026).","apa":"Dunajova, Z. (2026). Supplementary movies to PhD thesis “Geometry-driven self-organization of migrating cells and chiral filaments.” Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-21439\">https://doi.org/10.15479/AT-ISTA-21439</a>","chicago":"Dunajova, Zuzana. “Supplementary Movies to PhD Thesis ‘Geometry-Driven Self-Organization of Migrating Cells and Chiral Filaments.’” Institute of Science and Technology Austria, 2026. <a href=\"https://doi.org/10.15479/AT-ISTA-21439\">https://doi.org/10.15479/AT-ISTA-21439</a>.","mla":"Dunajova, Zuzana. <i>Supplementary Movies to PhD Thesis “Geometry-Driven Self-Organization of Migrating Cells and Chiral Filaments.”</i> Institute of Science and Technology Austria, 2026, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-21439\">10.15479/AT-ISTA-21439</a>."},"oa_version":"Published Version","contributor":[{"first_name":"Saren","last_name":"Tasciyan","id":"4323B49C-F248-11E8-B48F-1D18A9856A87","contributor_type":"researcher","orcid":"0000-0003-1671-393X"},{"orcid":"0000-0001-9198-2182 ","last_name":"Radler","first_name":"Philipp","contributor_type":"researcher","id":"40136C2A-F248-11E8-B48F-1D18A9856A87"}],"year":"2026","date_created":"2026-03-11T21:05:20Z","file_date_updated":"2026-03-11T20:52:39Z","day":"12","fulldoi":"https://doi.org/10.15479/AT-ISTA-21439","acknowledged_ssus":[{"_id":"Bio"},{"_id":"ScienComp"}],"department":[{"_id":"GradSch"},{"_id":"EdHa"}],"user_id":"68b8ca59-c5b3-11ee-8790-cd641c68093d","title":"Supplementary movies to PhD thesis “Geometry-driven self-organization of migrating cells and chiral filaments”","_id":"21439","article_processing_charge":"No","has_accepted_license":"1","project":[{"_id":"34d75525-11ca-11ed-8bc3-89b6307fee9d","name":"Motile active matter models of migrating cells and chiral filaments","grant_number":"26360"}],"doi":"10.15479/AT-ISTA-21439","oa":1,"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode","image":"/images/cc_by_nc_sa.png","name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)","short":"CC BY-NC-SA (4.0)"},"file":[{"access_level":"open_access","relation":"main_file","date_updated":"2026-03-11T20:41:28Z","success":1,"date_created":"2026-03-11T20:41:28Z","file_id":"21440","content_type":"application/zip","creator":"zdunajov","checksum":"47809a9a31b748b16e21e92d11ddc87f","file_name":"Supplementary_movies_Thesis_Dunajova.zip","file_size":154465214},{"checksum":"a64a174bc6abf0a5e77631e4fd121f1f","creator":"zdunajov","file_name":"readme.txt","file_size":2289,"file_id":"21441","date_created":"2026-03-11T20:52:39Z","content_type":"text/plain","date_updated":"2026-03-11T20:52:39Z","relation":"main_file","success":1,"access_level":"open_access"}],"corr_author":"1"},{"article_number":"4:1-4:10","intvolume":"       343","file_date_updated":"2026-06-22T08:54:32Z","date_created":"2026-06-14T22:01:45Z","publication":"6th Conference on Information-Theoretic Cryptography","year":"2025","publication_status":"published","citation":{"ieee":"K. Z. Pietrzak and P. Wang, “Time-space tradeoffs of truncation with preprocessing,” in <i>6th Conference on Information-Theoretic Cryptography</i>, Santa Barbara, CA, United States, 2025, vol. 343.","ista":"Pietrzak KZ, Wang P. 2025. Time-space tradeoffs of truncation with preprocessing. 6th Conference on Information-Theoretic Cryptography. ITC: Information Theoretic Cryptography, LIPIcs, vol. 343, 4:1-4:10.","ama":"Pietrzak KZ, Wang P. Time-space tradeoffs of truncation with preprocessing. In: <i>6th Conference on Information-Theoretic Cryptography</i>. Vol 343. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2025. doi:<a href=\"https://doi.org/10.4230/LIPIcs.ITC.2025.4\">10.4230/LIPIcs.ITC.2025.4</a>","short":"K.Z. Pietrzak, P. Wang, in:, 6th Conference on Information-Theoretic Cryptography, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025.","chicago":"Pietrzak, Krzysztof Z, and Pengxiang Wang. “Time-Space Tradeoffs of Truncation with Preprocessing.” In <i>6th Conference on Information-Theoretic Cryptography</i>, Vol. 343. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025. <a href=\"https://doi.org/10.4230/LIPIcs.ITC.2025.4\">https://doi.org/10.4230/LIPIcs.ITC.2025.4</a>.","mla":"Pietrzak, Krzysztof Z., and Pengxiang Wang. “Time-Space Tradeoffs of Truncation with Preprocessing.” <i>6th Conference on Information-Theoretic Cryptography</i>, vol. 343, 4:1-4:10, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025, doi:<a href=\"https://doi.org/10.4230/LIPIcs.ITC.2025.4\">10.4230/LIPIcs.ITC.2025.4</a>.","apa":"Pietrzak, K. Z., &#38; Wang, P. (2025). Time-space tradeoffs of truncation with preprocessing. In <i>6th Conference on Information-Theoretic Cryptography</i> (Vol. 343). Santa Barbara, CA, United States: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.ITC.2025.4\">https://doi.org/10.4230/LIPIcs.ITC.2025.4</a>"},"oa_version":"Published Version","month":"09","ddc":["000"],"publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","date_published":"2025-09-08T00:00:00Z","type":"conference","OA_place":"publisher","abstract":[{"lang":"eng","text":"Truncation of cryptographic outputs is a technique that was recently introduced in Baldimtsi et al. [Foteini Baldimtsi et al., 2022]. The general idea is to try out many inputs to some cryptographic algorithm until the output (e.g. a public-key or some hash value) falls into some sparse set and thus can be compressed: by trying out an expected 2^k different inputs one will find an output that starts with k zeros.\r\nUsing such truncation one can for example save substantial gas fees on Blockchains where storing values is very expensive. While [Foteini Baldimtsi et al., 2022] show that truncation preserves the security of the underlying primitive, they only consider a setting without preprocessing. In this work we show that lower bounds on the time-space tradeoff for inverting random functions and permutations also hold with truncation, except for parameters ranges where the bound fails to hold for \"trivial\" reasons.\r\nConcretely, it’s known that any algorithm that inverts a random function or permutation with range N making T queries and using S bits of auxiliary input must satisfy S⋅ T ≥ Nlog N. This lower bound no longer holds in the truncated setting where one must only invert a challenge from a range of size N/2^k, as now one can simply save the replies to all N/2^k challenges, which requires S = log N⋅ N /2^k bits and allows to invert with T = 1 query.\r\nWe show that with truncation, whenever S is somewhat smaller than the log N⋅ N /2^k bits required to store the entire truncated function table, the known S⋅ T ≥ Nlog N lower bound applies."}],"language":[{"iso":"eng"}],"quality_controlled":"1","status":"public","date_updated":"2026-06-22T08:57:41Z","scopus_import":"1","OA_type":"gold","author":[{"orcid":"0000-0002-9139-1654","full_name":"Pietrzak, Krzysztof Z","id":"3E04A7AA-F248-11E8-B48F-1D18A9856A87","last_name":"Pietrzak","first_name":"Krzysztof Z"},{"last_name":"Wang","first_name":"Pengxiang","full_name":"Wang, Pengxiang"}],"cryptoeprintid":1,"conference":{"location":"Santa Barbara, CA, United States","start_date":"2025-08-16","name":"ITC: Information Theoretic Cryptography","end_date":"2025-08-17"},"corr_author":"1","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"date_updated":"2026-06-22T08:54:32Z","relation":"main_file","success":1,"access_level":"open_access","creator":"dernst","checksum":"3f791b03df26853342855a9d9581cb58","file_size":772046,"file_name":"2025_LIPIcs_Pietrzak.pdf","date_created":"2026-06-22T08:54:32Z","file_id":"22118","content_type":"application/pdf"}],"keyword":["Time-Space Lower Bounds","Blockchains"],"oa":1,"doi":"10.4230/LIPIcs.ITC.2025.4","volume":343,"has_accepted_license":"1","external_id":{"cryptoeprintid":["2025/723"]},"das_tickbox":"0","alternative_title":["LIPIcs"],"article_processing_charge":"Yes","_id":"22007","title":"Time-space tradeoffs of truncation with preprocessing","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","department":[{"_id":"KrPi"}],"fulldoi":"https://doi.org/10.4230/LIPIcs.ITC.2025.4","day":"08","publication_identifier":{"eissn":["1868-8969"],"isbn":["9783959773850"]}},{"day":"23","publication_identifier":{"issn":["2692-3688"]},"page":"284-320","arxiv":1,"fulldoi":"https://doi.org/10.1090/cams/48","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","title":"Scaling-critical well-posedness for continuum Calogero–Moser models on the line","_id":"22032","article_processing_charge":"No","external_id":{"arxiv":["2311.12334"]},"article_type":"original","das_tickbox":"1","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2311.12334"}],"has_accepted_license":"1","volume":5,"doi":"10.1090/cams/48","oa":1,"tmp":{"short":"CC BY-NC-ND (4.0)","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","image":"/images/cc_by_nc_nd.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode"},"issue":"7","author":[{"full_name":"Killip, Rowan","first_name":"Rowan","last_name":"Killip"},{"full_name":"Laurens, Thierry","last_name":"Laurens","first_name":"Thierry"},{"first_name":"Monica","last_name":"Visan","id":"056daca0-b8d1-11f0-964f-f91054abf8ca","full_name":"Visan, Monica"}],"date_updated":"2026-06-22T11:21:09Z","OA_type":"diamond","scopus_import":"1","quality_controlled":"1","status":"public","abstract":[{"lang":"eng","text":"We prove that the focusing and defocusing continuum Calogero–Moser models are well-posed in the scaling-critical space L^2+(R). In the focusing case, this requires solutions to have mass less than that of the soliton."}],"language":[{"iso":"eng"}],"type":"journal_article","OA_place":"publisher","date_published":"2025-06-23T00:00:00Z","month":"06","ddc":["500"],"extern":"1","publisher":"American Mathematical Society","citation":{"ieee":"R. Killip, T. Laurens, and M. Vişan, “Scaling-critical well-posedness for continuum Calogero–Moser models on the line,” <i>Communications of the American Mathematical Society</i>, vol. 5, no. 7. American Mathematical Society, pp. 284–320, 2025.","ista":"Killip R, Laurens T, Vişan M. 2025. Scaling-critical well-posedness for continuum Calogero–Moser models on the line. Communications of the American Mathematical Society. 5(7), 284–320.","ama":"Killip R, Laurens T, Vişan M. Scaling-critical well-posedness for continuum Calogero–Moser models on the line. <i>Communications of the American Mathematical Society</i>. 2025;5(7):284-320. doi:<a href=\"https://doi.org/10.1090/cams/48\">10.1090/cams/48</a>","short":"R. Killip, T. Laurens, M. Vişan, Communications of the American Mathematical Society 5 (2025) 284–320.","chicago":"Killip, Rowan, Thierry Laurens, and Monica Vişan. “Scaling-Critical Well-Posedness for Continuum Calogero–Moser Models on the Line.” <i>Communications of the American Mathematical Society</i>. American Mathematical Society, 2025. <a href=\"https://doi.org/10.1090/cams/48\">https://doi.org/10.1090/cams/48</a>.","mla":"Killip, Rowan, et al. “Scaling-Critical Well-Posedness for Continuum Calogero–Moser Models on the Line.” <i>Communications of the American Mathematical Society</i>, vol. 5, no. 7, American Mathematical Society, 2025, pp. 284–320, doi:<a href=\"https://doi.org/10.1090/cams/48\">10.1090/cams/48</a>.","apa":"Killip, R., Laurens, T., &#38; Vişan, M. (2025). Scaling-critical well-posedness for continuum Calogero–Moser models on the line. <i>Communications of the American Mathematical Society</i>. American Mathematical Society. <a href=\"https://doi.org/10.1090/cams/48\">https://doi.org/10.1090/cams/48</a>"},"oa_version":"Published Version","year":"2025","date_created":"2026-06-19T07:42:34Z","publication":"Communications of the American Mathematical Society","publication_status":"published","intvolume":"         5"},{"doi":"10.1007/s00209-025-03821-8","oa":1,"article_type":"original","external_id":{"arxiv":["2403.09989"]},"das_tickbox":"1","article_processing_charge":"No","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2403.09989"}],"volume":311,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"22036","title":"Dispersive decay for the mass-critical nonlinear Schrödinger equation","arxiv":1,"publication_identifier":{"eissn":["1432-1823"],"issn":["0025-5874"]},"day":"24","fulldoi":"https://doi.org/10.1007/s00209-025-03821-8","publication":"Mathematische Zeitschrift","date_created":"2026-06-19T07:44:05Z","year":"2025","publication_status":"published","article_number":"21","intvolume":"       311","month":"07","extern":"1","publisher":"Springer Nature","date_published":"2025-07-24T00:00:00Z","citation":{"ama":"Fan C, Killip R, Vişan M, Zhao Z. Dispersive decay for the mass-critical nonlinear Schrödinger equation. <i>Mathematische Zeitschrift</i>. 2025;311. doi:<a href=\"https://doi.org/10.1007/s00209-025-03821-8\">10.1007/s00209-025-03821-8</a>","ieee":"C. Fan, R. Killip, M. Vişan, and Z. Zhao, “Dispersive decay for the mass-critical nonlinear Schrödinger equation,” <i>Mathematische Zeitschrift</i>, vol. 311. Springer Nature, 2025.","ista":"Fan C, Killip R, Vişan M, Zhao Z. 2025. Dispersive decay for the mass-critical nonlinear Schrödinger equation. Mathematische Zeitschrift. 311, 21.","apa":"Fan, C., Killip, R., Vişan, M., &#38; Zhao, Z. (2025). Dispersive decay for the mass-critical nonlinear Schrödinger equation. <i>Mathematische Zeitschrift</i>. 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Zhao, Mathematische Zeitschrift 311 (2025)."},"oa_version":"Preprint","quality_controlled":"1","status":"public","type":"journal_article","OA_place":"repository","abstract":[{"lang":"eng","text":"We prove dispersive decay, pointwise in time, for solutions to the mass-critical nonlinear Schrödinger equation in spatial dimensions d= 1, 2, 3."}],"language":[{"iso":"eng"}],"author":[{"first_name":"Chenjie","last_name":"Fan","full_name":"Fan, Chenjie"},{"first_name":"Rowan","last_name":"Killip","full_name":"Killip, Rowan"},{"last_name":"Visan","first_name":"Monica","full_name":"Visan, Monica","id":"056daca0-b8d1-11f0-964f-f91054abf8ca"},{"full_name":"Zhao, Zehua","first_name":"Zehua","last_name":"Zhao"}],"date_updated":"2026-06-22T13:00:14Z","scopus_import":"1","OA_type":"green"},{"title":"EvoPress: Accurate dynamic model compression via evolutionary search","_id":"20820","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","department":[{"_id":"DaAl"}],"publication_identifier":{"eissn":["2640-3498"]},"page":"55556-55590","day":"01","arxiv":1,"corr_author":"1","conference":{"end_date":"2025-07-19","name":"ICML: International Conference on Machine Learning","location":"Vancouver, Canada","start_date":"2025-07-13"},"oa":1,"file":[{"date_created":"2025-12-16T12:32:40Z","file_id":"20828","content_type":"application/pdf","creator":"dernst","checksum":"1d744fbaeb199b08e8b6f48bc0dd047e","file_size":908379,"file_name":"2025_ICML_Sieberling.pdf","access_level":"open_access","relation":"main_file","date_updated":"2025-12-16T12:32:40Z","success":1}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"volume":267,"has_accepted_license":"1","alternative_title":["PMLR"],"article_processing_charge":"No","external_id":{"arxiv":["2410.14649"]},"language":[{"iso":"eng"}],"abstract":[{"lang":"eng","text":"The high computational costs of large language models (LLMs) have led to a flurry of research on LLM compression, via methods such as quantization, sparsification, or structured pruning. A new frontier in this area is given by dynamic, non-uniform compression methods, which adjust the compression levels (e.g., sparsity) per-block or even per-layer in order to minimize accuracy loss, while guaranteeing a global compression threshold. Yet, current methods rely on estimating the \"importance\" of a given layer, implicitly assuming that layers contribute independently to the overall compression error. We begin from the motivating observation that this independence assumption does not generally hold for LLM compression: pruning a model further may even significantly recover performance. To address this, we propose EvoPress, a novel evolutionary framework for dynamic LLM compression. By formulating dynamic compression as a general optimization problem, EvoPress identifies optimal compression profiles in a highly efficient manner, and generalizes across diverse models and compression techniques. Via EvoPress, we achieve state-of-the-art performance for dynamic compression of Llama, Mistral, and Phi models, setting new benchmarks for structural pruning (block/layer dropping), unstructured sparsity, and quantization with dynamic bitwidths."}],"OA_place":"publisher","type":"conference","status":"public","quality_controlled":"1","OA_type":"gold","scopus_import":"1","date_updated":"2025-12-16T12:34:32Z","author":[{"full_name":"Sieberling, Oliver","first_name":"Oliver","last_name":"Sieberling"},{"last_name":"Kuznedelev","first_name":"Denis","full_name":"Kuznedelev, Denis"},{"last_name":"Kurtic","first_name":"Eldar","full_name":"Kurtic, Eldar","id":"47beb3a5-07b5-11eb-9b87-b108ec578218"},{"first_name":"Dan-Adrian","last_name":"Alistarh","id":"4A899BFC-F248-11E8-B48F-1D18A9856A87","full_name":"Alistarh, Dan-Adrian","orcid":"0000-0003-3650-940X"}],"file_date_updated":"2025-12-16T12:32:40Z","intvolume":"       267","publication_status":"published","year":"2025","date_created":"2025-12-14T23:02:05Z","publication":"42nd International Conference on Machine Learning","citation":{"mla":"Sieberling, Oliver, et al. “EvoPress: Accurate Dynamic Model Compression via Evolutionary Search.” <i>42nd International Conference on Machine Learning</i>, vol. 267, ML Research Press, 2025, pp. 55556–90.","chicago":"Sieberling, Oliver, Denis Kuznedelev, Eldar Kurtic, and Dan-Adrian Alistarh. “EvoPress: Accurate Dynamic Model Compression via Evolutionary Search.” In <i>42nd International Conference on Machine Learning</i>, 267:55556–90. ML Research Press, 2025.","apa":"Sieberling, O., Kuznedelev, D., Kurtic, E., &#38; Alistarh, D.-A. (2025). EvoPress: Accurate dynamic model compression via evolutionary search. In <i>42nd International Conference on Machine Learning</i> (Vol. 267, pp. 55556–55590). Vancouver, Canada: ML Research Press.","short":"O. Sieberling, D. Kuznedelev, E. Kurtic, D.-A. Alistarh, in:, 42nd International Conference on Machine Learning, ML Research Press, 2025, pp. 55556–55590.","ista":"Sieberling O, Kuznedelev D, Kurtic E, Alistarh D-A. 2025. EvoPress: Accurate dynamic model compression via evolutionary search. 42nd International Conference on Machine Learning. ICML: International Conference on Machine Learning, PMLR, vol. 267, 55556–55590.","ieee":"O. Sieberling, D. Kuznedelev, E. Kurtic, and D.-A. Alistarh, “EvoPress: Accurate dynamic model compression via evolutionary search,” in <i>42nd International Conference on Machine Learning</i>, Vancouver, Canada, 2025, vol. 267, pp. 55556–55590.","ama":"Sieberling O, Kuznedelev D, Kurtic E, Alistarh D-A. EvoPress: Accurate dynamic model compression via evolutionary search. In: <i>42nd International Conference on Machine Learning</i>. Vol 267. ML Research Press; 2025:55556-55590."},"oa_version":"Published Version","date_published":"2025-05-01T00:00:00Z","publisher":"ML Research Press","month":"05","ddc":["000"]},{"publication_status":"published","date_created":"2025-12-14T23:02:06Z","publication":"42nd International Conference on Machine Learning","year":"2025","intvolume":"       267","acknowledgement":"This work was supported by Hasler Foundation Program: Hasler Responsible AI (project number 21043). The research was also sponsored by the Army Research Office and was accomplished under Grant Number W911NF-24-1-0048. This work was further funded by the Swiss National Science Foundation (SNSF) under grant number 200021_205011. We also acknowledge project A11 of the Swiss National Supercomputing Centre (CSCS) for providing computing resources. Dan Alistarh and Ilia Markov were supported in part through the ERC Proofof-Concept grant FastML (Grant Agreement 101158077). Ali Ramezani-Kebrya was supported by the Research Council of Norway through FRIPRO Grant under project number 356103, its Centres of Excellence scheme, Integreat - Norwegian Centre for knowledge-driven machine learning under\r\nproject number 332645 - and its Centre for Research-based Innovation funding scheme (Visual Intelligence under grant no. 309439).","file_date_updated":"2025-12-16T12:45:41Z","publisher":"ML Research Press","ddc":["000"],"month":"05","date_published":"2025-05-01T00:00:00Z","citation":{"ama":"Nguyen AD, Markov I, Wu FZ, et al. Layer-wise quantization for quantized optimistic dual averaging. In: <i>42nd International Conference on Machine Learning</i>. Vol 267. ML Research Press; 2025:46026-46072.","ieee":"A. D. Nguyen <i>et al.</i>, “Layer-wise quantization for quantized optimistic dual averaging,” in <i>42nd International Conference on Machine Learning</i>, Vancouver, Canada, 2025, vol. 267, pp. 46026–46072.","ista":"Nguyen AD, Markov I, Wu FZ, Ramezani-Kebrya A, Antonakopoulos K, Alistarh D-A, Cevher V. 2025. Layer-wise quantization for quantized optimistic dual averaging. 42nd International Conference on Machine Learning. ICML: International Conference on Machine Learning, PMLR, vol. 267, 46026–46072.","apa":"Nguyen, A. D., Markov, I., Wu, F. Z., Ramezani-Kebrya, A., Antonakopoulos, K., Alistarh, D.-A., &#38; Cevher, V. (2025). Layer-wise quantization for quantized optimistic dual averaging. In <i>42nd International Conference on Machine Learning</i> (Vol. 267, pp. 46026–46072). Vancouver, Canada: ML Research Press.","mla":"Nguyen, Anh Duc, et al. “Layer-Wise Quantization for Quantized Optimistic Dual Averaging.” <i>42nd International Conference on Machine Learning</i>, vol. 267, ML Research Press, 2025, pp. 46026–72.","chicago":"Nguyen, Anh Duc, Ilia Markov, Frank Zhengqing Wu, Ali Ramezani-Kebrya, Kimon Antonakopoulos, Dan-Adrian Alistarh, and Volkan Cevher. “Layer-Wise Quantization for Quantized Optimistic Dual Averaging.” In <i>42nd International Conference on Machine Learning</i>, 267:46026–72. ML Research Press, 2025.","short":"A.D. Nguyen, I. Markov, F.Z. Wu, A. Ramezani-Kebrya, K. Antonakopoulos, D.-A. Alistarh, V. Cevher, in:, 42nd International Conference on Machine Learning, ML Research Press, 2025, pp. 46026–46072."},"oa_version":"Published Version","quality_controlled":"1","status":"public","OA_place":"publisher","type":"conference","language":[{"iso":"eng"}],"abstract":[{"text":"Modern deep neural networks exhibit heterogeneity across numerous layers of various types such as residuals, multi-head attention, etc., due to varying structures (dimensions, activation functions, etc.), distinct representation characteristics, which impact predictions. We develop a general layer-wise quantization framework with tight variance and code-length bounds, adapting to the heterogeneities over the course of training. We then apply a new layer-wise quantization technique within distributed variational inequalities (VIs), proposing a novel Quantized Optimistic Dual Averaging (QODA) algorithm with adaptive learning rates, which achieves competitive convergence rates for monotone VIs. We empirically show that QODA achieves up to a 150% speedup over the baselines in end-to-end training time for training Wasserstein GAN on 12+GPUs.","lang":"eng"}],"author":[{"last_name":"Nguyen","first_name":"Anh Duc","full_name":"Nguyen, Anh Duc"},{"full_name":"Markov, Ilia","id":"D0CF4148-C985-11E9-8066-0BDEE5697425","last_name":"Markov","first_name":"Ilia"},{"full_name":"Wu, Frank Zhengqing","last_name":"Wu","first_name":"Frank Zhengqing"},{"first_name":"Ali","last_name":"Ramezani-Kebrya","full_name":"Ramezani-Kebrya, Ali"},{"last_name":"Antonakopoulos","first_name":"Kimon","full_name":"Antonakopoulos, Kimon"},{"id":"4A899BFC-F248-11E8-B48F-1D18A9856A87","full_name":"Alistarh, Dan-Adrian","first_name":"Dan-Adrian","last_name":"Alistarh","orcid":"0000-0003-3650-940X"},{"last_name":"Cevher","first_name":"Volkan","full_name":"Cevher, Volkan"}],"OA_type":"gold","scopus_import":"1","date_updated":"2025-12-16T12:46:54Z","tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"file":[{"checksum":"a7edf0e4304171a3e035842b3aab1704","creator":"dernst","file_size":756213,"file_name":"2025_ICML_Nguyen.pdf","date_created":"2025-12-16T12:45:41Z","file_id":"20830","content_type":"application/pdf","relation":"main_file","date_updated":"2025-12-16T12:45:41Z","success":1,"access_level":"open_access"}],"oa":1,"project":[{"_id":"8e35c14b-16d5-11f0-9cad-a3fc35339161","name":"FastML: Efficient and Cost-Effective Distributed Machine Learning","grant_number":"101158077"}],"conference":{"end_date":"2025-07-19","start_date":"2025-07-13","location":"Vancouver, Canada","name":"ICML: International Conference on Machine Learning"},"external_id":{"arxiv":["2505.14371"]},"alternative_title":["PMLR"],"article_processing_charge":"No","has_accepted_license":"1","volume":267,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"20821","title":"Layer-wise quantization for quantized optimistic dual averaging","page":"46026-46072","day":"01","publication_identifier":{"eissn":["2640-3498"]},"arxiv":1,"department":[{"_id":"DaAl"}]},{"ddc":["500"],"month":"11","publisher":"EMS Press","date_published":"2025-11-07T00:00:00Z","citation":{"ama":"Helfter M. Sets with arbitrary Hausdorff and packing scales in infinite dimensional Banach spaces. <i>Journal of Fractal Geometry</i>. 2025. doi:<a href=\"https://doi.org/10.4171/jfg/177\">10.4171/jfg/177</a>","ieee":"M. Helfter, “Sets with arbitrary Hausdorff and packing scales in infinite dimensional Banach spaces,” <i>Journal of Fractal Geometry</i>. EMS Press, 2025.","ista":"Helfter M. 2025. Sets with arbitrary Hausdorff and packing scales in infinite dimensional Banach spaces. Journal of Fractal Geometry.","apa":"Helfter, M. (2025). Sets with arbitrary Hausdorff and packing scales in infinite dimensional Banach spaces. <i>Journal of Fractal Geometry</i>. 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Helfter, Journal of Fractal Geometry (2025)."},"oa_version":"Published Version","publication":"Journal of Fractal Geometry","year":"2025","date_created":"2025-12-19T10:15:37Z","publication_status":"epub_ahead","author":[{"first_name":"Mathieu","last_name":"Helfter","id":"7d296fbe-e2c6-11ee-84d3-d5c2945f9a57","full_name":"Helfter, Mathieu"}],"DOAJ_listed":"1","date_updated":"2026-06-18T18:26:33Z","OA_type":"gold","scopus_import":"1","quality_controlled":"1","status":"public","type":"journal_article","OA_place":"publisher","abstract":[{"text":"For every couple of Hausdorff functions ψ and φ verifying some mild assumptions, there exists a compact subset K of the Baire space such that the φ-Hausdorff measure and the ψ-packing measure on K are both finite and positive. Such examples are then embedded in any infinite dimensional Banach space to answer positively a question of Fan on the existence of metric spaces with arbitrary scales.","lang":"eng"}],"language":[{"iso":"eng"}],"article_type":"original","article_processing_charge":"Yes","main_file_link":[{"open_access":"1","url":"https://doi.org/10.4171/jfg/177"}],"oa":1,"doi":"10.4171/jfg/177","corr_author":"1","day":"07","publication_identifier":{"issn":["2308-1309"],"eissn":["2308-1317"]},"department":[{"_id":"VaKa"}],"fulldoi":"https://doi.org/10.4171/jfg/177","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"20839","title":"Sets with arbitrary Hausdorff and packing scales in infinite dimensional Banach spaces"},{"file_date_updated":"2025-12-22T13:51:09Z","corr_author":"1","oa":1,"doi":"10.15479/AT-ISTA-20842","contributor":[{"last_name":"Rosello","first_name":"Pere"},{"first_name":"Manuel","last_name":"Mekonnen"},{"contributor_type":"supervisor","id":"4C02D85E-F248-11E8-B48F-1D18A9856A87","first_name":"Onur","last_name":"Hosten","orcid":"0000-0002-2031-204X"}],"project":[{"_id":"bdb2a702-d553-11ed-ba76-f12e3e5a3bc6","grant_number":"101087907","name":"A quantum hybrid of atoms and milligram-scale pendulums: towards gravitational quantum mechanics"}],"year":"2025","date_created":"2025-12-21T14:23:50Z","file":[{"file_id":"20854","date_created":"2025-12-22T13:45:30Z","content_type":"application/x-zip-compressed","checksum":"7af34e4226a00cdcb7f154272050e217","creator":"sagafono","file_name":"AllData.zip","file_size":146656591,"access_level":"open_access","relation":"main_file","date_updated":"2025-12-22T13:45:30Z","success":1},{"checksum":"71806a2ef9fb26ad7b78e04c6754ee4e","creator":"sagafono","file_name":"SourceData.zip","file_size":93470129,"file_id":"20855","date_created":"2025-12-22T13:45:33Z","content_type":"application/x-zip-compressed","date_updated":"2025-12-22T13:45:33Z","relation":"main_file","success":1,"access_level":"open_access"},{"file_name":"readme.txt","file_size":461,"checksum":"08facd1b4a102f83e4d99d48a85b258d","creator":"sagafono","content_type":"text/plain","file_id":"20856","date_created":"2025-12-22T13:51:09Z","success":1,"date_updated":"2025-12-22T13:51:09Z","relation":"main_file","access_level":"open_access"}],"tmp":{"image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"oa_version":"Published Version","citation":{"ama":"Agafonova S. Research Data for: “One-milligram torsional pendulum toward experiments at the quantum-gravity interface.” 2025. doi:<a href=\"https://doi.org/10.15479/AT-ISTA-20842\">10.15479/AT-ISTA-20842</a>","ieee":"S. Agafonova, “Research Data for: ‘One-milligram torsional pendulum toward experiments at the quantum-gravity interface.’” Institute of Science and Technology Austria, 2025.","ista":"Agafonova S. 2025. Research Data for: ‘One-milligram torsional pendulum toward experiments at the quantum-gravity interface’, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT-ISTA-20842\">10.15479/AT-ISTA-20842</a>.","short":"S. Agafonova, (2025).","apa":"Agafonova, S. (2025). Research Data for: “One-milligram torsional pendulum toward experiments at the quantum-gravity interface.” Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT-ISTA-20842\">https://doi.org/10.15479/AT-ISTA-20842</a>","mla":"Agafonova, Sofia. <i>Research Data for: “One-Milligram Torsional Pendulum toward Experiments at the Quantum-Gravity Interface.”</i> Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT-ISTA-20842\">10.15479/AT-ISTA-20842</a>.","chicago":"Agafonova, Sofia. “Research Data for: ‘One-Milligram Torsional Pendulum toward Experiments at the Quantum-Gravity Interface.’” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT-ISTA-20842\">https://doi.org/10.15479/AT-ISTA-20842</a>."},"has_accepted_license":"1","date_published":"2025-12-22T00:00:00Z","article_processing_charge":"No","publisher":"Institute of Science and Technology Austria","month":"12","title":"Research Data for: 'One-milligram torsional pendulum toward experiments at the quantum-gravity interface'","related_material":{"record":[{"status":"public","relation":"used_in_publication","id":"20840"}]},"abstract":[{"lang":"eng","text":"Probing the possibility of entanglement generation through gravity offers a path to tackle the question of whether gravitational fields possess a quantum mechanical nature. A potential realization necessitates systems with low-frequency dynamics at an optimal mass scale, for which the microgram-to-milligram range is a strong contender. Here, after refining a figure-of-merit for the problem, we present a 1-milligram torsional pendulum operating at 18 Hz. We demonstrate laser cooling its motion from room temperature to 240~microkelvins, surpassing by over 20-fold the coldest motions attained for oscillators ranging from micrograms to kilograms. We quantify and contrast the utility of the current approach with other platforms. The achieved performance and large improvement potential highlight milligram-scale torsional pendulums as a powerful platform for precision measurements relevant to future studies at the quantum-gravity interface."}],"_id":"20842","type":"research_data","user_id":"68b8ca59-c5b3-11ee-8790-cd641c68093d","status":"public","fulldoi":"https://doi.org/10.15479/AT-ISTA-20842","date_updated":"2026-06-10T08:36:07Z","department":[{"_id":"GradSch"},{"_id":"OnHo"}],"author":[{"last_name":"Agafonova","first_name":"Sofya","full_name":"Agafonova, Sofya","id":"09501ff6-dca7-11ea-a8ae-b3e0b9166e80","orcid":"0000-0003-0582-2946"}],"day":"22"}]