[{"oa_version":"Published Version","quality_controlled":"1","_id":"17094","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"apa":"Bartocci, E., Ferrere, T., Henzinger, T. A., Nickovic, D., &#38; Oliveira da Costa, A. (2025). Information-flow interfaces. <i>Formal Methods in System Design</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s10703-024-00447-0\">https://doi.org/10.1007/s10703-024-00447-0</a>","ama":"Bartocci E, Ferrere T, Henzinger TA, Nickovic D, Oliveira da Costa A. Information-flow interfaces. <i>Formal Methods in System Design</i>. 2025;66:3-48. doi:<a href=\"https://doi.org/10.1007/s10703-024-00447-0\">10.1007/s10703-024-00447-0</a>","ista":"Bartocci E, Ferrere T, Henzinger TA, Nickovic D, Oliveira da Costa A. 2025. Information-flow interfaces. Formal Methods in System Design. 66, 3–48.","mla":"Bartocci, Ezio, et al. “Information-Flow Interfaces.” <i>Formal Methods in System Design</i>, vol. 66, Springer Nature, 2025, pp. 3–48, doi:<a href=\"https://doi.org/10.1007/s10703-024-00447-0\">10.1007/s10703-024-00447-0</a>.","ieee":"E. Bartocci, T. Ferrere, T. A. Henzinger, D. Nickovic, and A. Oliveira da Costa, “Information-flow interfaces,” <i>Formal Methods in System Design</i>, vol. 66. Springer Nature, pp. 3–48, 2025.","short":"E. Bartocci, T. Ferrere, T.A. Henzinger, D. Nickovic, A. Oliveira da Costa, Formal Methods in System Design 66 (2025) 3–48.","chicago":"Bartocci, Ezio, Thomas Ferrere, Thomas A Henzinger, Dejan Nickovic, and Ana Oliveira da Costa. “Information-Flow Interfaces.” <i>Formal Methods in System Design</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s10703-024-00447-0\">https://doi.org/10.1007/s10703-024-00447-0</a>."},"doi":"10.1007/s10703-024-00447-0","project":[{"grant_number":"101020093","name":"Vigilant Algorithmic Monitoring of Software","_id":"62781420-2b32-11ec-9570-8d9b63373d4d","call_identifier":"H2020"},{"_id":"34a1b658-11ca-11ed-8bc3-c75229f0241e","name":"Interface Theory for Security and Privacy","grant_number":"F8502"}],"volume":66,"department":[{"_id":"ToHe"}],"scopus_import":"1","date_updated":"2025-12-30T06:50:51Z","title":"Information-flow interfaces","author":[{"last_name":"Bartocci","first_name":"Ezio","full_name":"Bartocci, Ezio"},{"full_name":"Ferrere, Thomas","id":"40960E6E-F248-11E8-B48F-1D18A9856A87","last_name":"Ferrere","orcid":"0000-0001-5199-3143","first_name":"Thomas"},{"last_name":"Henzinger","orcid":"0000-0002-2985-7724","first_name":"Thomas A","full_name":"Henzinger, Thomas A","id":"40876CD8-F248-11E8-B48F-1D18A9856A87"},{"id":"41BCEE5C-F248-11E8-B48F-1D18A9856A87","full_name":"Nickovic, Dejan","first_name":"Dejan","last_name":"Nickovic"},{"last_name":"Oliveira da Costa","orcid":"0000-0002-8741-5799","first_name":"Ana","full_name":"Oliveira da Costa, Ana","id":"f347ec37-6676-11ee-b395-a888cb7b4fb4"}],"external_id":{"isi":["001230084200001"],"arxiv":["2002.06465"]},"license":"https://creativecommons.org/licenses/by/4.0/","OA_place":"publisher","arxiv":1,"article_type":"original","file_date_updated":"2025-12-30T06:50:12Z","related_material":{"record":[{"relation":"shorter_version","id":"11355","status":"public"}]},"publication_identifier":{"issn":["0925-9856"],"eissn":["1572-8102"]},"acknowledgement":"This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 956123 and it was funded in part by the Austrian Science Fund (FWF) project W1255-N23, by the Austrian FWF project ZK-35, by the FWF project SpyCoDe 10.55776/F85 and by the ERC-2020-AdG 101020093. This paper extends the text and the results of the manuscript published at FASE 2022 [1].","day":"01","ddc":["000"],"publication":"Formal Methods in System Design","status":"public","month":"05","corr_author":"1","PlanS_conform":"1","intvolume":"        66","language":[{"iso":"eng"}],"OA_type":"hybrid","publisher":"Springer Nature","has_accepted_license":"1","abstract":[{"text":"Contract-based design is a promising methodology for taming the complexity of developing sophisticated systems. A formal contract distinguishes between assumptions, which are constraints that the designer of a component puts on the environments in which the component can be used safely, and guarantees, which are promises that the designer asks from the team that implements the component. A theory of formal contracts can be formalized as an interface theory, which supports the composition and refinement of both assumptions and guarantees. Although there is a rich landscape of contract-based design methods that address functional and extra-functional properties, we present the first interface theory designed to ensure system-wide security properties. Our framework provides a refinement relation and a composition operation that support both incremental design and independent implementability. We develop our theory for both stateless and stateful interfaces. Additionally, we introduce information-flow contracts where assumptions and guarantees are sets of flow relations. We use these contracts to illustrate how to enrich information-flow interfaces with a semantic view. We illustrate the applicability of our framework with two examples inspired by the automotive domain.","lang":"eng"}],"date_created":"2024-06-02T22:00:57Z","date_published":"2025-05-01T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file":[{"creator":"dernst","file_name":"2025_FormalMethodsSysDesign_Bartocci.pdf","checksum":"244a71a916103b8ea08e9d0bab32bcd9","relation":"main_file","date_created":"2025-12-30T06:50:12Z","content_type":"application/pdf","access_level":"open_access","file_size":3860690,"file_id":"20879","success":1,"date_updated":"2025-12-30T06:50:12Z"}],"article_processing_charge":"Yes (via OA deal)","year":"2025","publication_status":"published","oa":1,"isi":1,"ec_funded":1,"type":"journal_article","page":"3-48"},{"status":"public","ddc":["510"],"corr_author":"1","month":"03","publication":"Discrete & Computational Geometry","publisher":"Springer Nature","date_created":"2024-06-16T22:01:07Z","has_accepted_license":"1","abstract":[{"lang":"eng","text":"The approximation of a circle with the edges of a fine square grid distorts the perimeter by a factor about 4/Pi. We prove that this factor is the same on average (in the ergodic sense) for approximations of any rectifiable curve by the edges of any non-exotic Delaunay mosaic (known as Voronoi path), and extend the results to all dimensions, generalizing Voronoi paths to Voronoi scapes."}],"pmid":1,"intvolume":"        73","language":[{"iso":"eng"}],"OA_type":"hybrid","file":[{"relation":"main_file","date_created":"2025-04-23T07:31:32Z","checksum":"ffb0c818222138f9f113f4bbea41e834","creator":"dernst","file_name":"2025_DiscreteComputGeom_EdelsbrunnerHe.pdf","file_size":283443,"content_type":"application/pdf","access_level":"open_access","success":1,"file_id":"19610","date_updated":"2025-04-23T07:31:32Z"}],"publication_status":"published","year":"2025","article_processing_charge":"Yes (via OA deal)","date_published":"2025-03-01T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","page":"490-499","oa":1,"ec_funded":1,"type":"journal_article","isi":1,"quality_controlled":"1","oa_version":"Published Version","_id":"17149","volume":73,"scopus_import":"1","department":[{"_id":"HeEd"}],"doi":"10.1007/s00454-024-00660-y","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"ieee":"H. Edelsbrunner and A. Nikitenko, “Average and expected distortion of Voronoi paths and scapes,” <i>Discrete &#38; Computational Geometry</i>, vol. 73. Springer Nature, pp. 490–499, 2025.","mla":"Edelsbrunner, Herbert, and Anton Nikitenko. “Average and Expected Distortion of Voronoi Paths and Scapes.” <i>Discrete &#38; Computational Geometry</i>, vol. 73, Springer Nature, 2025, pp. 490–99, doi:<a href=\"https://doi.org/10.1007/s00454-024-00660-y\">10.1007/s00454-024-00660-y</a>.","ama":"Edelsbrunner H, Nikitenko A. Average and expected distortion of Voronoi paths and scapes. <i>Discrete &#38; Computational Geometry</i>. 2025;73:490-499. doi:<a href=\"https://doi.org/10.1007/s00454-024-00660-y\">10.1007/s00454-024-00660-y</a>","ista":"Edelsbrunner H, Nikitenko A. 2025. Average and expected distortion of Voronoi paths and scapes. Discrete &#38; Computational Geometry. 73, 490–499.","apa":"Edelsbrunner, H., &#38; Nikitenko, A. (2025). Average and expected distortion of Voronoi paths and scapes. <i>Discrete &#38; Computational Geometry</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00454-024-00660-y\">https://doi.org/10.1007/s00454-024-00660-y</a>","chicago":"Edelsbrunner, Herbert, and Anton Nikitenko. “Average and Expected Distortion of Voronoi Paths and Scapes.” <i>Discrete &#38; Computational Geometry</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s00454-024-00660-y\">https://doi.org/10.1007/s00454-024-00660-y</a>.","short":"H. Edelsbrunner, A. Nikitenko, Discrete &#38; Computational Geometry 73 (2025) 490–499."},"project":[{"name":"Alpha Shape Theory Extended","grant_number":"788183","call_identifier":"H2020","_id":"266A2E9E-B435-11E9-9278-68D0E5697425"},{"grant_number":"Z00342","name":"Mathematics, Computer Science","_id":"268116B8-B435-11E9-9278-68D0E5697425","call_identifier":"FWF"},{"grant_number":"I02979-N35","name":"Persistence and stability of geometric complexes","_id":"2561EBF4-B435-11E9-9278-68D0E5697425","call_identifier":"FWF"}],"author":[{"first_name":"Herbert","last_name":"Edelsbrunner","orcid":"0000-0002-9823-6833","full_name":"Edelsbrunner, Herbert","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Nikitenko","orcid":"0000-0002-0659-3201","first_name":"Anton","full_name":"Nikitenko, Anton","id":"3E4FF1BA-F248-11E8-B48F-1D18A9856A87"}],"title":"Average and expected distortion of Voronoi paths and scapes","date_updated":"2026-02-16T12:18:50Z","arxiv":1,"day":"01","acknowledgement":"The authors thank Ranita Biswas and Tatiana Ezubova for the collaboration on computational experiments that motivated the work reported in this paper. The authors also thank Daniel Bonnema for proofreading and noticing an issue with the original proof of Lemma 4.3.\r\nOpen access funding provided by Institute of Science and Technology (IST Austria).\r\nThis project has received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme, Grant No. 788183, from the Wittgenstein Prize, Austrian Science Fund (FWF), Grant No. Z 342-N31, and from the DFG Collaborative Research Center TRR 109, ‘Discretization in Geometry and Dynamics’, Austrian Science Fund (FWF), Grant No. I 02979-N35.","article_type":"original","file_date_updated":"2025-04-23T07:31:32Z","publication_identifier":{"eissn":["1432-0444"],"issn":["0179-5376"]},"external_id":{"arxiv":["2012.03350"],"pmid":["39974750"],"isi":["001238566200004"]},"OA_place":"publisher"},{"article_processing_charge":"Yes (via OA deal)","year":"2025","publication_status":"published","file":[{"access_level":"open_access","content_type":"application/pdf","file_size":580791,"creator":"dernst","checksum":"321be8a584117feaea9f3feaa28caabd","file_name":"2025_WrKlinischeWochenschrift_Schober.pdf","date_created":"2025-12-30T06:54:03Z","relation":"main_file","date_updated":"2025-12-30T06:54:03Z","success":1,"file_id":"20880"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2025-07-01T00:00:00Z","page":"432-437","type":"journal_article","isi":1,"oa":1,"corr_author":"1","publication":"Wiener Klinische Wochenschrift","month":"07","status":"public","ddc":["570"],"abstract":[{"text":"Research involving human subjects or identifiable human material and data must be assessed by an ethics committee. The Karl Landsteiner University of Health Sciences has established a Commission on Ethics and Scientific Integrity to evaluate medical research conducted by its faculty and students and at its affiliated hospitals.\r\nAll projects submitted to the Commission on Ethics and Scientific Integrity between 2018 and 2023 were analyzed regarding their major characteristics, the duration of the evaluation process, and votes issued.\r\nA total of 520 applications were electronically submitted during the observation period. Most of the studies were retrospective data analyses in the field of oncology, psychology and surgery. Most studies included less than 100 volunteers. Of the applications 50% received a final vote within 5 months, during which several revision rounds took place. Overall, about 77% of votes issued during the observation period were positive and 2% were rejections. In 11% files were closed due to withdrawal. In 11% final votes were pending at the end of the observation period due to requests for revisions.\r\nOur results emphasize the importance of institutional ethics committees using the example of the Commission on Ethics and Scientific Integrity at the Karl Landsteiner University. Such committees fill a gap in evaluating research not covered by Austrian legal regulations. Continuous development of standards, operating procedures, and national and international collaborations are required to assess and minimize risks to trial subjects and to provide a safe and productive environment for research in human medicine and related fields.","lang":"eng"}],"date_created":"2024-10-20T22:02:07Z","has_accepted_license":"1","publisher":"Springer Nature","OA_type":"hybrid","language":[{"iso":"eng"}],"PlanS_conform":"1","intvolume":"       137","author":[{"first_name":"Sophie","last_name":"Schober","id":"80b0a0ef-4b9f-11ec-b119-8d9d94c4a1d8","full_name":"Schober, Sophie"},{"first_name":"Sascha","last_name":"Klee","full_name":"Klee, Sascha"},{"full_name":"Trautinger, Franz","last_name":"Trautinger","first_name":"Franz"}],"date_updated":"2025-12-30T06:55:59Z","title":"The role of institutional ethics committees in Austria: Report of the Commission on Ethics and Scientific Integrity of the Karl Landsteiner University of Health Sciences 2018–2023","acknowledgement":"Open access funding provided by Karl Landsteiner University.","article_type":"original","publication_identifier":{"issn":["0043-5325"],"eissn":["1613-7671"]},"file_date_updated":"2025-12-30T06:54:03Z","day":"01","OA_place":"publisher","external_id":{"isi":["001329812000001"]},"_id":"18449","quality_controlled":"1","oa_version":"Published Version","scopus_import":"1","department":[{"_id":"PreCl"}],"volume":137,"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"apa":"Schober, S., Klee, S., &#38; Trautinger, F. (2025). The role of institutional ethics committees in Austria: Report of the Commission on Ethics and Scientific Integrity of the Karl Landsteiner University of Health Sciences 2018–2023. <i>Wiener Klinische Wochenschrift</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00508-024-02462-x\">https://doi.org/10.1007/s00508-024-02462-x</a>","ama":"Schober S, Klee S, Trautinger F. The role of institutional ethics committees in Austria: Report of the Commission on Ethics and Scientific Integrity of the Karl Landsteiner University of Health Sciences 2018–2023. <i>Wiener Klinische Wochenschrift</i>. 2025;137:432-437. doi:<a href=\"https://doi.org/10.1007/s00508-024-02462-x\">10.1007/s00508-024-02462-x</a>","ista":"Schober S, Klee S, Trautinger F. 2025. The role of institutional ethics committees in Austria: Report of the Commission on Ethics and Scientific Integrity of the Karl Landsteiner University of Health Sciences 2018–2023. Wiener Klinische Wochenschrift. 137, 432–437.","mla":"Schober, Sophie, et al. “The Role of Institutional Ethics Committees in Austria: Report of the Commission on Ethics and Scientific Integrity of the Karl Landsteiner University of Health Sciences 2018–2023.” <i>Wiener Klinische Wochenschrift</i>, vol. 137, Springer Nature, 2025, pp. 432–37, doi:<a href=\"https://doi.org/10.1007/s00508-024-02462-x\">10.1007/s00508-024-02462-x</a>.","ieee":"S. Schober, S. Klee, and F. Trautinger, “The role of institutional ethics committees in Austria: Report of the Commission on Ethics and Scientific Integrity of the Karl Landsteiner University of Health Sciences 2018–2023,” <i>Wiener Klinische Wochenschrift</i>, vol. 137. Springer Nature, pp. 432–437, 2025.","short":"S. Schober, S. Klee, F. Trautinger, Wiener Klinische Wochenschrift 137 (2025) 432–437.","chicago":"Schober, Sophie, Sascha Klee, and Franz Trautinger. “The Role of Institutional Ethics Committees in Austria: Report of the Commission on Ethics and Scientific Integrity of the Karl Landsteiner University of Health Sciences 2018–2023.” <i>Wiener Klinische Wochenschrift</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s00508-024-02462-x\">https://doi.org/10.1007/s00508-024-02462-x</a>."},"doi":"10.1007/s00508-024-02462-x"},{"ddc":["510"],"publication":"Discrete Applied Mathematics","status":"public","corr_author":"1","month":"01","has_accepted_license":"1","abstract":[{"text":"For a given graph G=(V,E), we define its \\emph{nth subdivision} as the graph obtained from G by replacing every edge by a path of length n. We also define the \\emph{mth power} of G as the graph on vertex set V where we connect every pair of vertices at distance at most m in G. In this paper, we study the chromatic number of powers of subdivisions of graphs and resolve the case m=n asymptotically. In particular, our result confirms a conjecture of Mozafari-Nia and Iradmusa in the case m=n=3 in a strong sense.","lang":"eng"}],"date_created":"2024-10-27T23:01:44Z","publisher":"Elsevier","language":[{"iso":"eng"}],"OA_type":"hybrid","intvolume":"       360","publication_status":"published","year":"2025","article_processing_charge":"Yes (in subscription journal)","file":[{"file_id":"18836","success":1,"date_updated":"2025-01-13T09:25:59Z","relation":"main_file","date_created":"2025-01-13T09:25:59Z","file_name":"2025_DiscreteApplMath_Anastos.pdf","checksum":"bd20a13e56b3ea01daf5e7aca5247c60","creator":"dernst","file_size":441060,"content_type":"application/pdf","access_level":"open_access"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2025-01-15T00:00:00Z","page":"506-511","isi":1,"type":"journal_article","ec_funded":1,"oa":1,"_id":"18478","quality_controlled":"1","oa_version":"Published Version","department":[{"_id":"MaKw"}],"scopus_import":"1","volume":360,"project":[{"grant_number":"101034413","name":"IST-BRIDGE: International postdoctoral program","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","call_identifier":"H2020"}],"citation":{"apa":"Anastos, M., Boyadzhiyska, S., Rathke, S., &#38; Rué, J. (2025). On the chromatic number of powers of subdivisions of graphs. <i>Discrete Applied Mathematics</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.dam.2024.10.002\">https://doi.org/10.1016/j.dam.2024.10.002</a>","ista":"Anastos M, Boyadzhiyska S, Rathke S, Rué J. 2025. On the chromatic number of powers of subdivisions of graphs. Discrete Applied Mathematics. 360, 506–511.","ama":"Anastos M, Boyadzhiyska S, Rathke S, Rué J. On the chromatic number of powers of subdivisions of graphs. <i>Discrete Applied Mathematics</i>. 2025;360:506-511. doi:<a href=\"https://doi.org/10.1016/j.dam.2024.10.002\">10.1016/j.dam.2024.10.002</a>","ieee":"M. Anastos, S. Boyadzhiyska, S. Rathke, and J. Rué, “On the chromatic number of powers of subdivisions of graphs,” <i>Discrete Applied Mathematics</i>, vol. 360. Elsevier, pp. 506–511, 2025.","mla":"Anastos, Michael, et al. “On the Chromatic Number of Powers of Subdivisions of Graphs.” <i>Discrete Applied Mathematics</i>, vol. 360, Elsevier, 2025, pp. 506–11, doi:<a href=\"https://doi.org/10.1016/j.dam.2024.10.002\">10.1016/j.dam.2024.10.002</a>.","short":"M. Anastos, S. Boyadzhiyska, S. Rathke, J. Rué, Discrete Applied Mathematics 360 (2025) 506–511.","chicago":"Anastos, Michael, Simona Boyadzhiyska, Silas Rathke, and Juanjo Rué. “On the Chromatic Number of Powers of Subdivisions of Graphs.” <i>Discrete Applied Mathematics</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.dam.2024.10.002\">https://doi.org/10.1016/j.dam.2024.10.002</a>."},"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"doi":"10.1016/j.dam.2024.10.002","author":[{"last_name":"Anastos","first_name":"Michael","full_name":"Anastos, Michael","id":"0b2a4358-bb35-11ec-b7b9-e3279b593dbb"},{"full_name":"Boyadzhiyska, Simona","last_name":"Boyadzhiyska","first_name":"Simona"},{"full_name":"Rathke, Silas","first_name":"Silas","last_name":"Rathke"},{"first_name":"Juanjo","last_name":"Rué","full_name":"Rué, Juanjo"}],"title":"On the chromatic number of powers of subdivisions of graphs","date_updated":"2025-04-14T07:54:56Z","day":"15","file_date_updated":"2025-01-13T09:25:59Z","acknowledgement":"This work was initiated at the annual workshop of the Combinatorics and Graph Theory group of Freie Universität Berlin in Wilhelmsaue in September 2023. The authors would like to thank the institution for enabling this research. Finally, the fourth author would like to thank Tibor Szabó and the Combinatorics and Graph Theory group at Freie Universität Berlin for their hospitality during the research visit. Additionally, we thank Moharram Iradmusa for bringing the papers [5], [7] to our attention. Finally, we thank the anonymous referees for their suggestions on the manuscript, which have improved the quality of the document.\r\nM.A.: This project has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 101034413 .\r\nS.B.: The research leading to these results was supported by EPSRC, UK, grant no. EP/V048287/1. There are no additional data beyond that contained within the main manuscript.\r\nS.R.: Funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany’s Excellence Strategy – The Berlin Mathematics Research Center MATH+ (EXC-2046/1, project ID: 390685689).\r\nJ.R. acknowledges the support of the Grant PID2020-113082GB-I00 funded by MICIU/AEI/10.13039/501100011033, Spain, and the Severo Ochoa and María de Maeztu Program for Centers and Units of Excellence in R&D, Spain (CEX2020-001084-M).","article_type":"original","publication_identifier":{"issn":["0166-218X"]},"arxiv":1,"OA_place":"publisher","external_id":{"arxiv":["2404.05542"],"isi":["001343647000001"]}},{"external_id":{"isi":["001385382200040"]},"day":"01","article_type":"original","publication_identifier":{"eissn":["2327-4697"]},"title":"Limitation of time promotes cooperation in structured collaboration systems","date_updated":"2025-02-27T12:35:48Z","author":[{"last_name":"Zhang","first_name":"Yichao","full_name":"Zhang, Yichao"},{"first_name":"Jiasheng","last_name":"Wang","full_name":"Wang, Jiasheng"},{"full_name":"Wen, Guanghui","first_name":"Guanghui","last_name":"Wen"},{"full_name":"Guan, Jihong","last_name":"Guan","first_name":"Jihong"},{"full_name":"Zhou, Shuigeng","last_name":"Zhou","first_name":"Shuigeng"},{"last_name":"Chen","first_name":"Guanrong","full_name":"Chen, Guanrong"},{"first_name":"Krishnendu","last_name":"Chatterjee","orcid":"0000-0002-4561-241X","full_name":"Chatterjee, Krishnendu","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Matjaz","last_name":"Perc","full_name":"Perc, Matjaz"}],"doi":"10.1109/TNSE.2024.3481434","citation":{"mla":"Zhang, Yichao, et al. “Limitation of Time Promotes Cooperation in Structured Collaboration Systems.” <i>IEEE Transactions on Network Science and Engineering</i>, vol. 12, no. 1, IEEE, 2025, pp. 4–12, doi:<a href=\"https://doi.org/10.1109/TNSE.2024.3481434\">10.1109/TNSE.2024.3481434</a>.","ieee":"Y. Zhang <i>et al.</i>, “Limitation of time promotes cooperation in structured collaboration systems,” <i>IEEE Transactions on Network Science and Engineering</i>, vol. 12, no. 1. IEEE, pp. 4–12, 2025.","apa":"Zhang, Y., Wang, J., Wen, G., Guan, J., Zhou, S., Chen, G., … Perc, M. (2025). Limitation of time promotes cooperation in structured collaboration systems. <i>IEEE Transactions on Network Science and Engineering</i>. IEEE. <a href=\"https://doi.org/10.1109/TNSE.2024.3481434\">https://doi.org/10.1109/TNSE.2024.3481434</a>","ista":"Zhang Y, Wang J, Wen G, Guan J, Zhou S, Chen G, Chatterjee K, Perc M. 2025. Limitation of time promotes cooperation in structured collaboration systems. IEEE Transactions on Network Science and Engineering. 12(1), 4–12.","ama":"Zhang Y, Wang J, Wen G, et al. Limitation of time promotes cooperation in structured collaboration systems. <i>IEEE Transactions on Network Science and Engineering</i>. 2025;12(1):4-12. doi:<a href=\"https://doi.org/10.1109/TNSE.2024.3481434\">10.1109/TNSE.2024.3481434</a>","chicago":"Zhang, Yichao, Jiasheng Wang, Guanghui Wen, Jihong Guan, Shuigeng Zhou, Guanrong Chen, Krishnendu Chatterjee, and Matjaz Perc. “Limitation of Time Promotes Cooperation in Structured Collaboration Systems.” <i>IEEE Transactions on Network Science and Engineering</i>. IEEE, 2025. <a href=\"https://doi.org/10.1109/TNSE.2024.3481434\">https://doi.org/10.1109/TNSE.2024.3481434</a>.","short":"Y. Zhang, J. Wang, G. Wen, J. Guan, S. Zhou, G. Chen, K. Chatterjee, M. Perc, IEEE Transactions on Network Science and Engineering 12 (2025) 4–12."},"volume":12,"department":[{"_id":"KrCh"}],"scopus_import":"1","oa_version":"None","quality_controlled":"1","_id":"18529","isi":1,"type":"journal_article","page":"4-12","date_published":"2025-01-01T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_status":"published","year":"2025","article_processing_charge":"No","intvolume":"        12","OA_type":"closed access","language":[{"iso":"eng"}],"publisher":"IEEE","abstract":[{"lang":"eng","text":"Temporal networks are obtained from time-dependent interactions among individuals, whereas the interactions can be emails, phone calls, face-to-face meetings, or work collaboration. In this article, a temporal game framework is established, in which interactions among rational individuals are embedded into two-player games in a time-dependent manner. This allows studying the time-dependent complexity and variability of interactions, and the way they affect prosocial behaviors. Based on this simple mathematical model, it is found that the level of cooperation is promoted when the time of collaboration is equally limited for every individual. This observation is confirmed by a series of systematic human experiments on over 1,400 subjects, forming a foundation for comprehensively describing human temporal interactions in collaboration. The research results reveal an important incentive for human cooperation, leading to a better understanding of a fascinating aspect of human nature in society."}],"date_created":"2024-11-10T23:02:00Z","publication":"IEEE Transactions on Network Science and Engineering","status":"public","month":"01","issue":"1"},{"_id":"18558","quality_controlled":"1","oa_version":"None","department":[{"_id":"MaIb"}],"scopus_import":"1","volume":113,"doi":"10.1007/s10971-024-06607-2","citation":{"chicago":"Verma, Madhu, Ajay Kumar, Vijay Kumar Thakur, Akanksha Maurya, Sachin Kumar, Saurabh Singh, and Simant Kumar Srivastav. “Efficient and Rapid Sunlight-Driven Photocatalytic Degradation of Methylene Blue Dye Using Multiferroic BiFeO3 Nanoparticles.” <i>Journal of Sol-Gel Science and Technology</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s10971-024-06607-2\">https://doi.org/10.1007/s10971-024-06607-2</a>.","short":"M. Verma, A. Kumar, V.K. Thakur, A. Maurya, S. Kumar, S. Singh, S.K. Srivastav, Journal of Sol-Gel Science and Technology 113 (2025) 356–373.","ieee":"M. Verma <i>et al.</i>, “Efficient and rapid sunlight-driven photocatalytic degradation of methylene blue dye using multiferroic BiFeO3 nanoparticles,” <i>Journal of Sol-Gel Science and Technology</i>, vol. 113. Springer Nature, pp. 356–373, 2025.","mla":"Verma, Madhu, et al. “Efficient and Rapid Sunlight-Driven Photocatalytic Degradation of Methylene Blue Dye Using Multiferroic BiFeO3 Nanoparticles.” <i>Journal of Sol-Gel Science and Technology</i>, vol. 113, Springer Nature, 2025, pp. 356–73, doi:<a href=\"https://doi.org/10.1007/s10971-024-06607-2\">10.1007/s10971-024-06607-2</a>.","ista":"Verma M, Kumar A, Thakur VK, Maurya A, Kumar S, Singh S, Srivastav SK. 2025. Efficient and rapid sunlight-driven photocatalytic degradation of methylene blue dye using multiferroic BiFeO3 nanoparticles. Journal of Sol-Gel Science and Technology. 113, 356–373.","ama":"Verma M, Kumar A, Thakur VK, et al. Efficient and rapid sunlight-driven photocatalytic degradation of methylene blue dye using multiferroic BiFeO3 nanoparticles. <i>Journal of Sol-Gel Science and Technology</i>. 2025;113:356-373. doi:<a href=\"https://doi.org/10.1007/s10971-024-06607-2\">10.1007/s10971-024-06607-2</a>","apa":"Verma, M., Kumar, A., Thakur, V. K., Maurya, A., Kumar, S., Singh, S., &#38; Srivastav, S. K. (2025). Efficient and rapid sunlight-driven photocatalytic degradation of methylene blue dye using multiferroic BiFeO3 nanoparticles. <i>Journal of Sol-Gel Science and Technology</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s10971-024-06607-2\">https://doi.org/10.1007/s10971-024-06607-2</a>"},"author":[{"full_name":"Verma, Madhu","first_name":"Madhu","last_name":"Verma"},{"first_name":"Ajay","last_name":"Kumar","full_name":"Kumar, Ajay"},{"first_name":"Vijay Kumar","last_name":"Thakur","full_name":"Thakur, Vijay Kumar"},{"full_name":"Maurya, Akanksha","last_name":"Maurya","first_name":"Akanksha"},{"full_name":"Kumar, Sachin","last_name":"Kumar","first_name":"Sachin"},{"first_name":"Saurabh","last_name":"Singh","orcid":"0000-0003-2209-5269","full_name":"Singh, Saurabh","id":"12d625da-9cb3-11ed-9667-af09d37d3f0a"},{"last_name":"Srivastav","first_name":"Simant Kumar","full_name":"Srivastav, Simant Kumar"}],"date_updated":"2025-05-19T14:00:43Z","title":"Efficient and rapid sunlight-driven photocatalytic degradation of methylene blue dye using multiferroic BiFeO3 nanoparticles","article_type":"original","publication_identifier":{"issn":["0928-0707"],"eissn":["1573-4846"]},"acknowledgement":"Simant Kumar Srivastav greatly acknowledges the University Grant Commission (UGC), New Delhi, India for providing BSR start-up grant to carry out this research work.\r\nThis research was supported by start-up grant of the University Grant Commission (UGC), New Delhi, India through project no F-30-500/2019 (BSR).","day":"01","external_id":{"isi":["001348590700001"]},"month":"02","publication":"Journal of Sol-Gel Science and Technology","status":"public","abstract":[{"text":"The current investigation presents a facile and cost-effective sol-gel approach for the synthesis of phase-pure multiferroic bismuth ferrite (BiFeO3) nanoparticles (BFO NPs) by using propylene glycol as a complexing agent, intended for use as a photocatalyst to efficiently degrade organic dyes in aqueous solutions under natural sunlight. Characterization techniques, including thermogravimetric analysis (TGA), Fourier transform infrared spectroscopy (FT-IR), and X-ray diffraction (XRD), elucidated a plausible reaction pathway for the formation of phase-pure BFO NPs. Rietveld refinement of the XRD data, in conjunction with transmission electron microscopy (TEM) and Raman spectroscopy, confirmed the synthesis of single-phase BFO NPs at 400 °C, displaying a space group of R3c and an average crystallite size of 25 nm. UV–visible diffuse reflectance spectroscopy revealed an absorption cut-off wavelength near 590 nm, corresponding to a band gap of 2.08 eV, indicating the capability of BFO NPs to absorb visible light within the 400–590 nm range. BFO NPs have shown efficient and rapid photocatalytic degradation of methylene blue (MB) in acidic, neutral, and basic pH conditions under natural sunlight. This is attributed to the intrinsic ferroelectric and ferromagnetic ordering present in synthesized BFO NPs which facilitates the separation and migration of photoinduced charges through band bending phenomena at the interface.","lang":"eng"}],"date_created":"2024-11-17T23:01:47Z","publisher":"Springer Nature","OA_type":"closed access","language":[{"iso":"eng"}],"intvolume":"       113","article_processing_charge":"No","year":"2025","publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2025-02-01T00:00:00Z","page":"356-373","type":"journal_article","isi":1},{"volume":24,"department":[{"_id":"UlWa"}],"scopus_import":"1","citation":{"chicago":"Lipiński, Michał, Konstantin Mischaikow, and Marian Mrozek. “Morse Predecomposition of an Invariant Set.” <i>Qualitative Theory of Dynamical Systems</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1007/s12346-024-01144-3\">https://doi.org/10.1007/s12346-024-01144-3</a>.","short":"M. Lipiński, K. Mischaikow, M. Mrozek, Qualitative Theory of Dynamical Systems 24 (2025).","mla":"Lipiński, Michał, et al. “Morse Predecomposition of an Invariant Set.” <i>Qualitative Theory of Dynamical Systems</i>, vol. 24, no. 1, 5, Springer Nature, 2025, doi:<a href=\"https://doi.org/10.1007/s12346-024-01144-3\">10.1007/s12346-024-01144-3</a>.","ieee":"M. Lipiński, K. Mischaikow, and M. Mrozek, “Morse predecomposition of an invariant set,” <i>Qualitative Theory of Dynamical Systems</i>, vol. 24, no. 1. Springer Nature, 2025.","ama":"Lipiński M, Mischaikow K, Mrozek M. Morse predecomposition of an invariant set. <i>Qualitative Theory of Dynamical Systems</i>. 2025;24(1). doi:<a href=\"https://doi.org/10.1007/s12346-024-01144-3\">10.1007/s12346-024-01144-3</a>","ista":"Lipiński M, Mischaikow K, Mrozek M. 2025. Morse predecomposition of an invariant set. Qualitative Theory of Dynamical Systems. 24(1), 5.","apa":"Lipiński, M., Mischaikow, K., &#38; Mrozek, M. (2025). Morse predecomposition of an invariant set. <i>Qualitative Theory of Dynamical Systems</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s12346-024-01144-3\">https://doi.org/10.1007/s12346-024-01144-3</a>"},"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"doi":"10.1007/s12346-024-01144-3","project":[{"name":"IST-BRIDGE: International postdoctoral program","grant_number":"101034413","call_identifier":"H2020","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c"}],"quality_controlled":"1","oa_version":"Published Version","_id":"18580","arxiv":1,"file_date_updated":"2024-11-28T06:52:38Z","article_type":"original","acknowledgement":"M.L. acknowledge support by the Dioscuri program initiated by the Max Planck Society, jointly managed with the National Science Centre (Poland), and mutually funded by the Polish Ministry of Science and Higher Education and the German Federal Ministry of Education and Research. M.L. also acknowledges that this project has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 101034413. Research of M.M. is partially supported by the Polish National Science Center under Opus Grant No. 2019/35/B/ST1/00874. The work of K.M. was partially supported by the National Science Foundation under awards DMS-1839294 and HDR TRIPODS award CCF-1934924, DARPA contract HR0011-16-2-0033, National Institutes of Health award R01 GM126555, Air Force Office of Scientific Research under award numbers FA9550-23-1-0011, AWD00010853-MOD002 and MURI FA9550-23-1-0400. K.M. was also supported by a grant from the Simons Foundation. Open access funding provided by Institute of Science and Technology (IST Austria). ","publication_identifier":{"issn":["1575-5460"],"eissn":["1662-3592"]},"day":"01","external_id":{"isi":["001356000500005"],"arxiv":["2312.08013"]},"OA_place":"publisher","author":[{"full_name":"Lipiński, Michał","id":"dfffb474-4317-11ee-8f5c-fe3fc95a425e","last_name":"Lipiński","orcid":"0000-0001-9789-9750","first_name":"Michał"},{"full_name":"Mischaikow, Konstantin","last_name":"Mischaikow","first_name":"Konstantin"},{"full_name":"Mrozek, Marian","first_name":"Marian","last_name":"Mrozek"}],"date_updated":"2025-04-14T07:54:56Z","title":"Morse predecomposition of an invariant set","publisher":"Springer Nature","abstract":[{"lang":"eng","text":"Motivated by the study of recurrent orbits and dynamics within a Morse set of a Morse decomposition we introduce the concept of Morse predecomposition of an isolated invariant set within the setting of both combinatorial and classical dynamical systems. While Morse decomposition summarizes solely the gradient part of a dynamical system, the developed generalization extends to the recurrent component as well. In particular, a chain recurrent set, which is indecomposable in terms of Morse decomposition, can be represented more finely in the Morse predecomposition framework. This generalization is achieved by forgoing the poset structure inherent to Morse decomposition and relaxing the notion of connection between Morse sets (elements of Morse decomposition) in favor of what we term ’links’. We prove that a Morse decomposition is a special case of Morse predecomposition indexed by a poset. Additionally, we show how a Morse predecomposition may be condensed back to retrieve a Morse decomposition."}],"has_accepted_license":"1","date_created":"2024-11-24T23:01:47Z","intvolume":"        24","language":[{"iso":"eng"}],"OA_type":"hybrid","issue":"1","corr_author":"1","month":"02","ddc":["514","510"],"status":"public","publication":"Qualitative Theory of Dynamical Systems","oa":1,"ec_funded":1,"type":"journal_article","isi":1,"file":[{"date_updated":"2024-11-28T06:52:38Z","success":1,"file_id":"18595","file_size":1483668,"content_type":"application/pdf","access_level":"open_access","relation":"main_file","date_created":"2024-11-28T06:52:38Z","file_name":"2025_predecomposition.pdf","checksum":"73309a57cc798d696caa57b6aa1467d8","creator":"mlipinsk"}],"year":"2025","article_processing_charge":"Yes (via OA deal)","publication_status":"published","date_published":"2025-02-01T00:00:00Z","article_number":"5","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"},{"date_updated":"2025-09-30T10:22:46Z","title":"Moist convective scaling: Insights from an idealised model","author":[{"first_name":"Lokahith N","last_name":"Agasthya","full_name":"Agasthya, Lokahith N","id":"cd100965-0804-11ed-9c55-f4878ff4e877"},{"id":"f978ccb0-3f7f-11eb-b193-b0e2bd13182b","full_name":"Muller, Caroline J","first_name":"Caroline J","orcid":"0000-0001-5836-5350","last_name":"Muller"},{"full_name":"Cheve, Mathis","id":"c2cdb722-b15c-11ef-9e63-db902a30b40d","last_name":"Cheve","first_name":"Mathis"}],"OA_place":"publisher","external_id":{"isi":["001363135200001"]},"article_type":"original","publication_identifier":{"eissn":["1477-870X"],"issn":["0035-9009"]},"acknowledgement":"The authors gratefully acknowledge the help of Julian Renaud and Alzbeta “Bety” Pechacova. Julian went through the relevant literature on the topic in the initial stages of the study in a very thorough manner and allowed the authors to understand the various types of idealised models that have been studied and the various approaches used. Bety ran simulations and performed analysis of the outputs of several simulations, which were crucial to bringing the article to its final form.\r\n\r\nThe authors also acknowledge the input of Prof. Martin Singh (Monash University, Australia) and discussions with Gregory Dritschel, Prof. Steven Tobias, and Prof. Douglas Parker (Leeds University, United Kingdom).\r\n\r\nThis project has received funding from the European Union's Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 101034413. C. Muller gratefully acknowledges funding from the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation program (Project CLUSTER, Grant Agreement No. 805041). This research was supported by the Scientific Service Units (SSU) of IST Austria through resources provided by Scientific Computing (SciComp).","file_date_updated":"2025-07-03T06:46:27Z","day":"01","_id":"18605","quality_controlled":"1","oa_version":"Published Version","project":[{"grant_number":"101034413","name":"IST-BRIDGE: International postdoctoral program","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","call_identifier":"H2020"},{"name":"Organization of CLoUdS, and implications of Tropical  cyclones and for the Energetics of the tropics, in current and waRming climate","grant_number":"805041","call_identifier":"H2020","_id":"629205d8-2b32-11ec-9570-e1356ff73576"}],"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"doi":"10.1002/qj.4902","citation":{"short":"L.N. Agasthya, C.J. Muller, M. Cheve, Quarterly Journal of the Royal Meteorological Society 151 (2025).","chicago":"Agasthya, Lokahith N, Caroline J Muller, and Mathis Cheve. “Moist Convective Scaling: Insights from an Idealised Model.” <i>Quarterly Journal of the Royal Meteorological Society</i>. Wiley, 2025. <a href=\"https://doi.org/10.1002/qj.4902\">https://doi.org/10.1002/qj.4902</a>.","apa":"Agasthya, L. N., Muller, C. J., &#38; Cheve, M. (2025). Moist convective scaling: Insights from an idealised model. <i>Quarterly Journal of the Royal Meteorological Society</i>. Wiley. <a href=\"https://doi.org/10.1002/qj.4902\">https://doi.org/10.1002/qj.4902</a>","ista":"Agasthya LN, Muller CJ, Cheve M. 2025. Moist convective scaling: Insights from an idealised model. Quarterly Journal of the Royal Meteorological Society. 151(766), e4902.","ama":"Agasthya LN, Muller CJ, Cheve M. Moist convective scaling: Insights from an idealised model. <i>Quarterly Journal of the Royal Meteorological Society</i>. 2025;151(766). doi:<a href=\"https://doi.org/10.1002/qj.4902\">10.1002/qj.4902</a>","ieee":"L. N. Agasthya, C. J. Muller, and M. Cheve, “Moist convective scaling: Insights from an idealised model,” <i>Quarterly Journal of the Royal Meteorological Society</i>, vol. 151, no. 766. Wiley, 2025.","mla":"Agasthya, Lokahith N., et al. “Moist Convective Scaling: Insights from an Idealised Model.” <i>Quarterly Journal of the Royal Meteorological Society</i>, vol. 151, no. 766, e4902, Wiley, 2025, doi:<a href=\"https://doi.org/10.1002/qj.4902\">10.1002/qj.4902</a>."},"department":[{"_id":"CaMu"}],"scopus_import":"1","volume":151,"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","date_published":"2025-01-01T00:00:00Z","article_number":"e4902","article_processing_charge":"Yes (via OA deal)","year":"2025","publication_status":"published","file":[{"checksum":"2b4968f1c794da56d1eb7b856a406de7","creator":"dernst","file_name":"2025_QuartJRMS_Agasthya.pdf","date_created":"2025-07-03T06:46:27Z","relation":"main_file","access_level":"open_access","content_type":"application/pdf","file_size":5924105,"success":1,"file_id":"19958","date_updated":"2025-07-03T06:46:27Z"}],"type":"journal_article","isi":1,"ec_funded":1,"oa":1,"acknowledged_ssus":[{"_id":"ScienComp"}],"publication":"Quarterly Journal of the Royal Meteorological Society","month":"01","ddc":["550"],"corr_author":"1","status":"public","issue":"766","language":[{"iso":"eng"}],"OA_type":"hybrid","intvolume":"       151","abstract":[{"lang":"eng","text":"The response of clouds and moist-convective processes to heat loss to space by long-wave radiative cooling is an important feedback in the Earth's atmosphere. It is known that moist convection increases roughly in equilibrium with radiative cooling, an assumption often made in simplified models of the tropical atmosphere. In this study, we use an idealised two-dimensional model of the atmosphere introduced by Vallis et. al. and incorporate a bulk-cooling term, which is an idealisation of radiative cooling in the atmosphere. We comment briefly on the static stability of the system to dry and moist convection and characteris its moist convective response to changes in the bulk cooling. We find that, while the clear-sky regions of the model respond directly to the change in the cooling term, the regions dominated by moist convective plumes are insensitive to changes in cooling. Similar to previous findings from cloud-resolving models, we too find in our idealised setting that the majority of the increase in convection occurs via an increase in the areal coverage of convection, rather than its intensity. We argue that these small-scale convective processes are an upper bound on how quickly convective intensity can change to stay in equilibrium with radiative cooling."}],"date_created":"2024-12-01T23:01:54Z","has_accepted_license":"1","publisher":"Wiley"},{"author":[{"full_name":"Wei, H","last_name":"Wei","first_name":"H"},{"full_name":"Zhu, H","first_name":"H","last_name":"Zhu"},{"full_name":"Ying, W","first_name":"W","last_name":"Ying"},{"full_name":"Janssens, H","first_name":"H","last_name":"Janssens"},{"full_name":"Kvasnica, M","last_name":"Kvasnica","first_name":"M"},{"full_name":"Winne, JM","first_name":"JM","last_name":"Winne"},{"first_name":"Y","last_name":"Gao","full_name":"Gao, Y"},{"orcid":"0000-0002-8302-7596","last_name":"Friml","first_name":"Jiří","id":"4159519E-F248-11E8-B48F-1D18A9856A87","full_name":"Friml, Jiří"},{"first_name":"Q","last_name":"Ma","full_name":"Ma, Q"},{"full_name":"Tan, S","last_name":"Tan","first_name":"S"},{"last_name":"Liu","first_name":"X","full_name":"Liu, X"},{"first_name":"E","last_name":"Russinova","full_name":"Russinova, E"},{"full_name":"Sun, L","first_name":"L","last_name":"Sun"}],"date_updated":"2025-05-19T14:02:01Z","title":"Structural insights into brassinosteroid export mediated by the Arabidopsis ABC transporter ABCB1","DOAJ_listed":"1","publication_identifier":{"issn":["2590-3462"]},"acknowledgement":"We thank the Cryo-EM Center of the University of Science and Technology of China for the EM facility support. We thank Yaowei Wang, Yongming Luo, and Nemanja Vukašinović (VIB-UGhent, Belgium) for useful discussions and technical support. L.S. is supported by an Outstanding Young Scholar Award from the Qiu Shi Science and Technologies Foundation and a Young Scholar Award from the Cyrus Tang Foundation. No conflict of interest is declared.","file_date_updated":"2025-04-16T09:02:05Z","article_type":"original","day":"13","external_id":{"isi":["001416757300001"],"pmid":["39497419"]},"license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","OA_place":"publisher","oa_version":"Published Version","quality_controlled":"1","_id":"18619","volume":6,"department":[{"_id":"JiFr"}],"scopus_import":"1","citation":{"ama":"Wei H, Zhu H, Ying W, et al. Structural insights into brassinosteroid export mediated by the Arabidopsis ABC transporter ABCB1. <i>Plant Communications</i>. 2025;6(1). doi:<a href=\"https://doi.org/10.1016/j.xplc.2024.101181\">10.1016/j.xplc.2024.101181</a>","apa":"Wei, H., Zhu, H., Ying, W., Janssens, H., Kvasnica, M., Winne, J., … Sun, L. (2025). Structural insights into brassinosteroid export mediated by the Arabidopsis ABC transporter ABCB1. <i>Plant Communications</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.xplc.2024.101181\">https://doi.org/10.1016/j.xplc.2024.101181</a>","ista":"Wei H, Zhu H, Ying W, Janssens H, Kvasnica M, Winne J, Gao Y, Friml J, Ma Q, Tan S, Liu X, Russinova E, Sun L. 2025. Structural insights into brassinosteroid export mediated by the Arabidopsis ABC transporter ABCB1. Plant Communications. 6(1), 101181.","ieee":"H. Wei <i>et al.</i>, “Structural insights into brassinosteroid export mediated by the Arabidopsis ABC transporter ABCB1,” <i>Plant Communications</i>, vol. 6, no. 1. Elsevier, 2025.","mla":"Wei, H., et al. “Structural Insights into Brassinosteroid Export Mediated by the Arabidopsis ABC Transporter ABCB1.” <i>Plant Communications</i>, vol. 6, no. 1, 101181, Elsevier, 2025, doi:<a href=\"https://doi.org/10.1016/j.xplc.2024.101181\">10.1016/j.xplc.2024.101181</a>.","short":"H. Wei, H. Zhu, W. Ying, H. Janssens, M. Kvasnica, J. Winne, Y. Gao, J. Friml, Q. Ma, S. Tan, X. Liu, E. Russinova, L. Sun, Plant Communications 6 (2025).","chicago":"Wei, H, H Zhu, W Ying, H Janssens, M Kvasnica, JM Winne, Y Gao, et al. “Structural Insights into Brassinosteroid Export Mediated by the Arabidopsis ABC Transporter ABCB1.” <i>Plant Communications</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.xplc.2024.101181\">https://doi.org/10.1016/j.xplc.2024.101181</a>."},"tmp":{"image":"/images/cc_by_nc_nd.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)"},"doi":"10.1016/j.xplc.2024.101181","file":[{"creator":"dernst","checksum":"7b0e4511e43cc0da06730c3edb7c1167","file_name":"2025_PlantComm_Wei.pdf","date_created":"2025-04-16T09:02:05Z","relation":"main_file","access_level":"open_access","content_type":"application/pdf","file_size":4443183,"success":1,"file_id":"19575","date_updated":"2025-04-16T09:02:05Z"}],"year":"2025","article_processing_charge":"Yes","publication_status":"published","article_number":"101181","date_published":"2025-01-13T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa":1,"type":"journal_article","isi":1,"issue":"1","month":"01","status":"public","ddc":["580"],"publication":"Plant Communications","publisher":"Elsevier","abstract":[{"text":"Brassinosteroids (BRs) are steroidal phytohormones indispensable for plant growth, development, and responses to environmental stresses. The export of bioactive BRs to the apoplast is essential for BR signalling initiation, which requires binding of BR molecule to the extracellular domains of the plasma membrane-localized receptor complex. We have previously shown that the Arabidopsis thaliana ATP-binding cassette (ABC) transporter, ABCB19, functions as a BR exporter, and together with its close homologue, ABCB1, positively regulate BR signalling. Here, we demonstrate that ABCB1 is another BR transporter. The ATP hydrolysis activity of ABCB1 was stimulated by bioactive BRs, and its transport activity was confirmed in proteoliposomes and protoplasts. Structures of ABCB1 in substrate-unbound (apo), brassinolide (BL)-bound, and ATP plus BL-bound states were determined. In the BL-bound structure, BL was bound to the hydrophobic cavity formed by the transmembrane domain, and triggered local conformational changes. Together, our data provide additional insights into the ABC transporter-mediated BR export.","lang":"eng"}],"has_accepted_license":"1","pmid":1,"date_created":"2024-12-04T11:21:16Z","intvolume":"         6","language":[{"iso":"eng"}],"OA_type":"gold"},{"_id":"18626","quality_controlled":"1","oa_version":"Preprint","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2310.18238"}],"department":[{"_id":"HeEd"}],"scopus_import":"1","volume":461,"project":[{"call_identifier":"H2020","_id":"266A2E9E-B435-11E9-9278-68D0E5697425","name":"Alpha Shape Theory Extended","grant_number":"788183"},{"_id":"268116B8-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","grant_number":"Z00342","name":"Mathematics, Computer Science"},{"name":"Persistence and stability of geometric complexes","grant_number":"I02979-N35","call_identifier":"FWF","_id":"2561EBF4-B435-11E9-9278-68D0E5697425"}],"doi":"10.1016/j.aim.2024.110055","citation":{"mla":"Edelsbrunner, Herbert, et al. “Order-2 Delaunay Triangulations Optimize Angles.” <i>Advances in Mathematics</i>, vol. 461, 110055, Elsevier, 2025, doi:<a href=\"https://doi.org/10.1016/j.aim.2024.110055\">10.1016/j.aim.2024.110055</a>.","ieee":"H. Edelsbrunner, A. Garber, and M. Saghafian, “Order-2 Delaunay triangulations optimize angles,” <i>Advances in Mathematics</i>, vol. 461. Elsevier, 2025.","ista":"Edelsbrunner H, Garber A, Saghafian M. 2025. Order-2 Delaunay triangulations optimize angles. Advances in Mathematics. 461, 110055.","ama":"Edelsbrunner H, Garber A, Saghafian M. Order-2 Delaunay triangulations optimize angles. <i>Advances in Mathematics</i>. 2025;461. doi:<a href=\"https://doi.org/10.1016/j.aim.2024.110055\">10.1016/j.aim.2024.110055</a>","apa":"Edelsbrunner, H., Garber, A., &#38; Saghafian, M. (2025). Order-2 Delaunay triangulations optimize angles. <i>Advances in Mathematics</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.aim.2024.110055\">https://doi.org/10.1016/j.aim.2024.110055</a>","chicago":"Edelsbrunner, Herbert, Alexey Garber, and Morteza Saghafian. “Order-2 Delaunay Triangulations Optimize Angles.” <i>Advances in Mathematics</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.aim.2024.110055\">https://doi.org/10.1016/j.aim.2024.110055</a>.","short":"H. Edelsbrunner, A. Garber, M. Saghafian, Advances in Mathematics 461 (2025)."},"author":[{"full_name":"Edelsbrunner, Herbert","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87","last_name":"Edelsbrunner","orcid":"0000-0002-9823-6833","first_name":"Herbert"},{"last_name":"Garber","first_name":"Alexey","full_name":"Garber, Alexey"},{"first_name":"Morteza","last_name":"Saghafian","id":"f86f7148-b140-11ec-9577-95435b8df824","full_name":"Saghafian, Morteza"}],"title":"Order-2 Delaunay triangulations optimize angles","date_updated":"2025-04-15T07:16:53Z","day":"01","acknowledgement":"Work by the first and third authors is partially supported by the European Research Council (ERC), grant no. 788183, by the Wittgenstein Prize, Austrian Science Fund (FWF), grant no. Z 342-N31, and by the DFG Collaborative Research Center TRR 109, Austrian Science Fund (FWF), grant no. I 02979-N35. Work by the second author is partially supported by the Alexander von Humboldt Foundation.","article_type":"original","publication_identifier":{"eissn":["1090-2082"],"issn":["0001-8708"]},"arxiv":1,"OA_place":"repository","external_id":{"isi":["001370682500001"],"arxiv":["2310.18238"]},"status":"public","publication":"Advances in Mathematics","month":"02","corr_author":"1","date_created":"2024-12-08T23:01:54Z","abstract":[{"lang":"eng","text":"The local angle property of the (order-1) Delaunay triangulations of a generic set in R2\r\n asserts that the sum of two angles opposite a common edge is less than π. This paper extends this property to higher order and uses it to generalize two classic properties from order-1 to order-2: (1) among the complete level-2 hypertriangulations of a generic point set in R2, the order-2 Delaunay triangulation lexicographically maximizes the sorted angle vector; (2) among the maximal level-2 hypertriangulations of a generic point set in R2, the order-2 Delaunay triangulation is the only one that has the local angle property. We also use our method of establishing (2) to give a new short proof of the angle vector optimality for the (order-1) Delaunay triangulation. For order-1, both properties have been instrumental in numerous applications of Delaunay triangulations, and we expect that their generalization will make order-2 Delaunay triangulations more attractive to applications as well."}],"publisher":"Elsevier","OA_type":"green","language":[{"iso":"eng"}],"intvolume":"       461","publication_status":"published","year":"2025","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2025-02-01T00:00:00Z","article_number":"110055","isi":1,"ec_funded":1,"type":"journal_article","oa":1},{"publication":"Nature Astronomy","month":"02","ddc":["520"],"status":"public","date_created":"2024-12-08T23:01:56Z","has_accepted_license":"1","pmid":1,"abstract":[{"text":"Within the established framework of structure formation, galaxies start as systems of low stellar mass and gradually grow into far more massive galaxies. The existence of massive galaxies in the first billion years of the Universe, as suggested by recent observations, seems to challenge this model, as such galaxies would require highly efficient conversion of baryons into stars. An even greater challenge in this epoch is the existence of massive galaxies that have already ceased forming stars. However, robust detections of early massive quiescent galaxies have been challenging due to the coarse wavelength sampling of photometric surveys. Here we report the spectroscopic confirmation with the James Webb Space Telescope of the quiescent galaxy RUBIES-EGS-QG-1 at redshift z = 4.90, 1.2 billion years after the Big Bang. Deep stellar absorption features in the spectrum reveal that the stellar mass of the galaxy of 1011 M⊙ formed in a short 200 Myr burst of star formation, after which star formation activity dropped rapidly and persistently. According to current galaxy formation models, systems with such rapid stellar mass growth and early quenching are too rare to plausibly occur in the small area probed spectroscopically with JWST. Instead, the discovery of RUBIES-EGS-QG-1 implies that early massive quiescent galaxies can be quenched earlier or exhaust gas available for star formation more efficiently than assumed at present.","lang":"eng"}],"publisher":"Springer Nature","OA_type":"hybrid","language":[{"iso":"eng"}],"intvolume":"         9","article_processing_charge":"Yes (via OA deal)","year":"2025","publication_status":"published","file":[{"success":1,"file_id":"19574","date_updated":"2025-04-16T08:53:59Z","relation":"main_file","date_created":"2025-04-16T08:53:59Z","creator":"dernst","checksum":"fb9109951dfe72f08c04c72cd7cfba69","file_name":"2025_NatureAstronomy_deGraaff.pdf","file_size":2034513,"content_type":"application/pdf","access_level":"open_access"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2025-02-01T00:00:00Z","page":"280-292","type":"journal_article","isi":1,"oa":1,"_id":"18631","quality_controlled":"1","oa_version":"Published Version","scopus_import":"1","department":[{"_id":"JoMa"}],"volume":9,"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"apa":"De Graaff, A., Setton, D. J., Brammer, G., Cutler, S., Suess, K. A., Labbé, I., … Williams, C. C. (2025). Efficient formation of a massive quiescent galaxy at redshift 4.9. <i>Nature Astronomy</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41550-024-02424-3\">https://doi.org/10.1038/s41550-024-02424-3</a>","ista":"De Graaff A, Setton DJ, Brammer G, Cutler S, Suess KA, Labbé I, Leja J, Weibel A, Maseda MV, Whitaker KE, Bezanson R, Boogaard LA, Cleri NJ, De Lucia G, Franx M, Greene JE, Hirschmann M, Matthee JJ, Mcconachie I, Naidu RP, Oesch PA, Price SH, Rix HW, Valentino F, Wang B, Williams CC. 2025. Efficient formation of a massive quiescent galaxy at redshift 4.9. Nature Astronomy. 9, 280–292.","ama":"De Graaff A, Setton DJ, Brammer G, et al. Efficient formation of a massive quiescent galaxy at redshift 4.9. <i>Nature Astronomy</i>. 2025;9:280-292. doi:<a href=\"https://doi.org/10.1038/s41550-024-02424-3\">10.1038/s41550-024-02424-3</a>","ieee":"A. De Graaff <i>et al.</i>, “Efficient formation of a massive quiescent galaxy at redshift 4.9,” <i>Nature Astronomy</i>, vol. 9. Springer Nature, pp. 280–292, 2025.","mla":"De Graaff, Anna, et al. “Efficient Formation of a Massive Quiescent Galaxy at Redshift 4.9.” <i>Nature Astronomy</i>, vol. 9, Springer Nature, 2025, pp. 280–92, doi:<a href=\"https://doi.org/10.1038/s41550-024-02424-3\">10.1038/s41550-024-02424-3</a>.","short":"A. De Graaff, D.J. Setton, G. Brammer, S. Cutler, K.A. Suess, I. Labbé, J. Leja, A. Weibel, M.V. Maseda, K.E. Whitaker, R. Bezanson, L.A. Boogaard, N.J. Cleri, G. De Lucia, M. Franx, J.E. Greene, M. Hirschmann, J.J. Matthee, I. Mcconachie, R.P. Naidu, P.A. Oesch, S.H. Price, H.W. Rix, F. Valentino, B. Wang, C.C. Williams, Nature Astronomy 9 (2025) 280–292.","chicago":"De Graaff, Anna, David J. Setton, Gabriel Brammer, Sam Cutler, Katherine A. Suess, Ivo Labbé, Joel Leja, et al. “Efficient Formation of a Massive Quiescent Galaxy at Redshift 4.9.” <i>Nature Astronomy</i>. Springer Nature, 2025. <a href=\"https://doi.org/10.1038/s41550-024-02424-3\">https://doi.org/10.1038/s41550-024-02424-3</a>."},"doi":"10.1038/s41550-024-02424-3","author":[{"full_name":"De Graaff, Anna","last_name":"De Graaff","first_name":"Anna"},{"first_name":"David J.","last_name":"Setton","full_name":"Setton, David J."},{"last_name":"Brammer","first_name":"Gabriel","full_name":"Brammer, Gabriel"},{"last_name":"Cutler","first_name":"Sam","full_name":"Cutler, Sam"},{"full_name":"Suess, Katherine A.","first_name":"Katherine A.","last_name":"Suess"},{"full_name":"Labbé, Ivo","last_name":"Labbé","first_name":"Ivo"},{"last_name":"Leja","first_name":"Joel","full_name":"Leja, Joel"},{"full_name":"Weibel, Andrea","last_name":"Weibel","first_name":"Andrea"},{"first_name":"Michael V.","last_name":"Maseda","full_name":"Maseda, Michael V."},{"full_name":"Whitaker, Katherine E.","first_name":"Katherine E.","last_name":"Whitaker"},{"full_name":"Bezanson, Rachel","last_name":"Bezanson","first_name":"Rachel"},{"full_name":"Boogaard, Leindert A.","last_name":"Boogaard","first_name":"Leindert A."},{"first_name":"Nikko J.","last_name":"Cleri","full_name":"Cleri, Nikko J."},{"first_name":"Gabriella","last_name":"De Lucia","full_name":"De Lucia, Gabriella"},{"full_name":"Franx, Marijn","last_name":"Franx","first_name":"Marijn"},{"last_name":"Greene","first_name":"Jenny E.","full_name":"Greene, Jenny E."},{"full_name":"Hirschmann, Michaela","last_name":"Hirschmann","first_name":"Michaela"},{"first_name":"Jorryt J","last_name":"Matthee","orcid":"0000-0003-2871-127X","full_name":"Matthee, Jorryt J","id":"7439a258-f3c0-11ec-9501-9df22fe06720"},{"first_name":"Ian","last_name":"Mcconachie","full_name":"Mcconachie, Ian"},{"full_name":"Naidu, Rohan P.","first_name":"Rohan P.","last_name":"Naidu"},{"full_name":"Oesch, Pascal A.","first_name":"Pascal A.","last_name":"Oesch"},{"full_name":"Price, Sedona H.","last_name":"Price","first_name":"Sedona H."},{"full_name":"Rix, Hans Walter","last_name":"Rix","first_name":"Hans Walter"},{"full_name":"Valentino, Francesco","last_name":"Valentino","first_name":"Francesco"},{"full_name":"Wang, Bingjie","first_name":"Bingjie","last_name":"Wang"},{"last_name":"Williams","first_name":"Christina C.","full_name":"Williams, Christina C."}],"date_updated":"2025-05-19T14:01:21Z","title":"Efficient formation of a massive quiescent galaxy at redshift 4.9","article_type":"original","acknowledgement":"We thank V. Buat, D. Burgarella and J. Zavala for sharing their NOEMA data and constraints on the dust-obscured star formation of RUBIES-EGS-QG-1. This work is partially based on observations carried out under project number W20CK with the IRAM NOEMA Interferometer. IRAM is supported by INSU/CNRS (France), MPG (Germany) and IGN (Spain). We thank C. Lagos for providing measurements from the SHARK simulation. This research was supported by the International Space Science Institute (ISSI) in Bern, through ISSI International Team Project No. 562. M.V.M., J.L. and B.W. acknowledge funding support from NASA through JWST-GO-4233. The Cosmic Dawn Center is funded by the Danish National Research Foundation (Grant No. DNRF140 to G.B., P.A.O. and K.E.W.). This work has received funding from the Swiss State Secretariat for Education, Research and Innovation (Contract No. MB22.00072) and the Swiss National Science Foundation (Project Grant No. 200020_207349 to P.A.O.). Support for this work was provided by the Brinson Foundation through a Brinson Prize Fellowship grant (D.J.S.). K.A.S. is a NHFP Hubble Fellow. Support for this work was provided by NASA through the NASA Hubble Fellowship Grant No. HST-HF2-51515.001-A awarded by the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Incorporated, under NASA contract NAS 5-26555 (R.P.N.). This work is based on observations made with the NASA/ESA/CSA JWST. The data were obtained from the Mikulski Archive for Space Telescopes at the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-03127 for JWST. The observations in this work are associated with programmes ERS-1345, GO-2234, DDT-2750 and GO-4233. We gratefully acknowledge the CEERS and DDT-2750 teams for developing their observing programme with a zero-exclusive-access period. Open access funding provided by Max Planck Society.","file_date_updated":"2025-04-16T08:53:59Z","publication_identifier":{"eissn":["2397-3366"]},"day":"01","OA_place":"publisher","external_id":{"pmid":["39990236"],"isi":["001420347200001"]}},{"page":"244-281","oa":1,"type":"journal_article","ec_funded":1,"isi":1,"file":[{"relation":"main_file","date_created":"2025-01-13T10:34:42Z","checksum":"1dc50d156feb777c86d779fb1c9ac875","creator":"dernst","file_name":"2025_MathNachrichten_DelloSchiavo.pdf","file_size":1734511,"content_type":"application/pdf","access_level":"open_access","success":1,"file_id":"18838","date_updated":"2025-01-13T10:34:42Z"}],"publication_status":"published","article_processing_charge":"Yes (via OA deal)","year":"2025","date_published":"2025-01-01T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"Wiley","date_created":"2024-12-08T23:01:56Z","abstract":[{"lang":"eng","text":"For an arbitrary dimension (Formula presented.), we study: the polyharmonic Gaussian field (Formula presented.) on the discrete torus (Formula presented.), that is the random field whose law on (Formula presented.) given by (Formula presented.) where (Formula presented.) is the Lebesgue measure and (Formula presented.) is the discrete Laplacian; the associated discrete Liouville quantum gravity (LQG) measure associated with it, that is, the random measure on (Formula presented.) (Formula presented.) where (Formula presented.) is a regularity parameter. As (Formula presented.), we prove convergence of the fields (Formula presented.) to the polyharmonic Gaussian field (Formula presented.) on the continuous torus (Formula presented.), as well as convergence of the random measures (Formula presented.) to the LQG measure (Formula presented.) on (Formula presented.), for all (Formula presented.). "}],"has_accepted_license":"1","intvolume":"       298","language":[{"iso":"eng"}],"OA_type":"hybrid","issue":"1","month":"01","publication":"Mathematische Nachrichten","status":"public","ddc":["510"],"arxiv":1,"day":"01","acknowledgement":"KTS is grateful to Christoph Thiele for valuable discussions and helpful references. LDS is grateful to Nathanaël Berestycki for valuable discussions on Gaussian Multiplicative Chaoses. The authors are grateful to an anonymous reviewer for suggestions which improved the presentation.\r\nThe authors gratefully acknowledge funding by the Deutsche Forschungsgemeinschaft through the project ‘Random Riemannian Geometry’ within the SPP 2265 ‘Random Geometric Systems.'\r\nLDS gratefully acknowledges financial support from the European Research Council (grant agreement No. 716117, awarded to J. Maas) and from the Austrian Science Fund (FWF). His research was funded by the Austrian Science Fund (FWF) project 10.55776/F65 and project 10.55776/ESP208.\r\nRH, EK, and KTS gratefully acknowledge funding by the Hausdorff Center for Mathematics (project ID 390685813), and through project B03 within the CRC 1060 (project ID 211504053). RH and KTS also gratefully acknowledges financial support from the European Research Council through the ERC AdG ‘RicciBounds’ (grant agreement 694405).\r\nOpen access funding enabled and organized by Projekt DEAL.","file_date_updated":"2025-01-13T10:34:42Z","article_type":"original","publication_identifier":{"eissn":["1522-2616"],"issn":["0025-584X"]},"external_id":{"arxiv":["2302.02963"],"isi":["001366948500001"]},"OA_place":"publisher","author":[{"orcid":"0000-0002-9881-6870","last_name":"Dello Schiavo","first_name":"Lorenzo","id":"ECEBF480-9E4F-11EA-B557-B0823DDC885E","full_name":"Dello Schiavo, Lorenzo"},{"full_name":"Herry, Ronan","first_name":"Ronan","last_name":"Herry"},{"last_name":"Kopfer","first_name":"Eva","full_name":"Kopfer, Eva"},{"full_name":"Sturm, Karl Theodor","first_name":"Karl Theodor","last_name":"Sturm"}],"title":"Polyharmonic fields and Liouville quantum gravity measures on tori of arbitrary dimension: From discrete to continuous","date_updated":"2025-04-14T07:27:49Z","volume":298,"scopus_import":"1","department":[{"_id":"JaMa"}],"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"ista":"Dello Schiavo L, Herry R, Kopfer E, Sturm KT. 2025. Polyharmonic fields and Liouville quantum gravity measures on tori of arbitrary dimension: From discrete to continuous. Mathematische Nachrichten. 298(1), 244–281.","apa":"Dello Schiavo, L., Herry, R., Kopfer, E., &#38; Sturm, K. T. (2025). Polyharmonic fields and Liouville quantum gravity measures on tori of arbitrary dimension: From discrete to continuous. <i>Mathematische Nachrichten</i>. Wiley. <a href=\"https://doi.org/10.1002/mana.202400169\">https://doi.org/10.1002/mana.202400169</a>","ama":"Dello Schiavo L, Herry R, Kopfer E, Sturm KT. Polyharmonic fields and Liouville quantum gravity measures on tori of arbitrary dimension: From discrete to continuous. <i>Mathematische Nachrichten</i>. 2025;298(1):244-281. doi:<a href=\"https://doi.org/10.1002/mana.202400169\">10.1002/mana.202400169</a>","mla":"Dello Schiavo, Lorenzo, et al. “Polyharmonic Fields and Liouville Quantum Gravity Measures on Tori of Arbitrary Dimension: From Discrete to Continuous.” <i>Mathematische Nachrichten</i>, vol. 298, no. 1, Wiley, 2025, pp. 244–81, doi:<a href=\"https://doi.org/10.1002/mana.202400169\">10.1002/mana.202400169</a>.","ieee":"L. Dello Schiavo, R. Herry, E. Kopfer, and K. T. Sturm, “Polyharmonic fields and Liouville quantum gravity measures on tori of arbitrary dimension: From discrete to continuous,” <i>Mathematische Nachrichten</i>, vol. 298, no. 1. Wiley, pp. 244–281, 2025.","short":"L. Dello Schiavo, R. Herry, E. Kopfer, K.T. 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Mapping neurons and resolving their individual synaptic connections can be achieved by volumetric imaging at nanoscale resolution with dense cellular labelling. Light microscopy is uniquely positioned to visualize specific molecules but dense, synapse-level circuit reconstruction by light microscopy has been out of reach due to limitations in resolution, contrast, and volumetric imaging capability. Here we developed light-microscopy based connectomics (LICONN). We integrated specifically engineered hydrogel embedding and expansion with comprehensive deep-learning based segmentation and analysis of connectivity, thus directly incorporating molecular information in synapse-level brain tissue reconstructions. LICONN will allow synapse-level brain tissue phenotyping in biological experiments in a readily adoptable manner."}]},{"article_processing_charge":"No","year":"2025","publication_status":"published","date_published":"2025-03-01T00:00:00Z","article_number":"137869","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","type":"journal_article","isi":1,"month":"03","status":"public","publication":"Materials Letters","publisher":"Elsevier","date_created":"2024-12-22T23:01:47Z","abstract":[{"lang":"eng","text":"We developed in-situ engineered polycrystalline polythiophene (PTh) and its composite with reduced graphene oxide (PTh-rGO) via a simple chemical synthesis. The PTh-rGO-based electrodes in a symmetrical device with xanthan gum in 1 M aq. Na2SO4 as an electrolyte, delivers a specific capacitance (Csp) of 114.7 F g–1 (electrode) and 28.7 F g–1 (cell) at an applied current density of 0.2 A g−1. The maximum energy and power densities recorded from the device were 588.0 mWh kg−1 and 1.1 kW kg−1 at 1.5 A g−1. The device exhibited a remarkable retention of Csp of 98.9 % over 10,000 continuous galvanostatic charge–discharge cycles highlighting an excellent performance. Electrochemical impedance spectroscopy analysis emphasizes material’s excellent structural integrity. This is attributed to the crystalline phases present in the matrix."}],"intvolume":"       382","language":[{"iso":"eng"}],"OA_type":"closed access","author":[{"first_name":"Neelima","last_name":"Mahato","full_name":"Mahato, Neelima"},{"orcid":"0000-0003-2209-5269","last_name":"Singh","first_name":"Saurabh","id":"12d625da-9cb3-11ed-9667-af09d37d3f0a","full_name":"Singh, Saurabh"},{"full_name":"Sreekanth, T. V.M.","first_name":"T. V.M.","last_name":"Sreekanth"},{"full_name":"Yoo, Kisoo","first_name":"Kisoo","last_name":"Yoo"},{"last_name":"Kim","first_name":"Jonghoon","full_name":"Kim, Jonghoon"}],"date_updated":"2025-05-19T14:05:22Z","title":"In-situ engineered highly-crystalline Polythiophene empowered electrochemical capacitor-II: Anomalous electrochemical charge storage behavior of Polythiophene-rGO composite","publication_identifier":{"eissn":["1873-4979"],"issn":["0167-577X"]},"acknowledgement":"This work was partly supported by the Institute of Information & Communications Technology Planning & Evaluation (IITP) grant funded by the Korea government (MSIT) (No.RS-2021-II210077) and Korea Institute of Energy Technology Evaluation and Planning (KETEP) grant funded by the Korea government (MOTIE)(RS-2024-00398346, ESS BigData-Based O&M and Asset Management Technical Manpower Training).","article_type":"original","day":"01","external_id":{"isi":["001433664000001"]},"quality_controlled":"1","oa_version":"None","_id":"18701","volume":382,"scopus_import":"1","department":[{"_id":"MaIb"}],"doi":"10.1016/j.matlet.2024.137869","citation":{"ieee":"N. Mahato, S. Singh, T. V. M. Sreekanth, K. Yoo, and J. Kim, “In-situ engineered highly-crystalline Polythiophene empowered electrochemical capacitor-II: Anomalous electrochemical charge storage behavior of Polythiophene-rGO composite,” <i>Materials Letters</i>, vol. 382. Elsevier, 2025.","mla":"Mahato, Neelima, et al. “In-Situ Engineered Highly-Crystalline Polythiophene Empowered Electrochemical Capacitor-II: Anomalous Electrochemical Charge Storage Behavior of Polythiophene-RGO Composite.” <i>Materials Letters</i>, vol. 382, 137869, Elsevier, 2025, doi:<a href=\"https://doi.org/10.1016/j.matlet.2024.137869\">10.1016/j.matlet.2024.137869</a>.","ista":"Mahato N, Singh S, Sreekanth TVM, Yoo K, Kim J. 2025. In-situ engineered highly-crystalline Polythiophene empowered electrochemical capacitor-II: Anomalous electrochemical charge storage behavior of Polythiophene-rGO composite. Materials Letters. 382, 137869.","apa":"Mahato, N., Singh, S., Sreekanth, T. V. M., Yoo, K., &#38; Kim, J. (2025). In-situ engineered highly-crystalline Polythiophene empowered electrochemical capacitor-II: Anomalous electrochemical charge storage behavior of Polythiophene-rGO composite. <i>Materials Letters</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.matlet.2024.137869\">https://doi.org/10.1016/j.matlet.2024.137869</a>","ama":"Mahato N, Singh S, Sreekanth TVM, Yoo K, Kim J. In-situ engineered highly-crystalline Polythiophene empowered electrochemical capacitor-II: Anomalous electrochemical charge storage behavior of Polythiophene-rGO composite. <i>Materials Letters</i>. 2025;382. doi:<a href=\"https://doi.org/10.1016/j.matlet.2024.137869\">10.1016/j.matlet.2024.137869</a>","chicago":"Mahato, Neelima, Saurabh Singh, T. V.M. Sreekanth, Kisoo Yoo, and Jonghoon Kim. “In-Situ Engineered Highly-Crystalline Polythiophene Empowered Electrochemical Capacitor-II: Anomalous Electrochemical Charge Storage Behavior of Polythiophene-RGO Composite.” <i>Materials Letters</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.matlet.2024.137869\">https://doi.org/10.1016/j.matlet.2024.137869</a>.","short":"N. Mahato, S. Singh, T.V.M. Sreekanth, K. Yoo, J. Kim, Materials Letters 382 (2025)."}},{"page":"703-712","type":"journal_article","isi":1,"publication_status":"published","article_processing_charge":"No","year":"2025","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2025-04-01T00:00:00Z","abstract":[{"lang":"eng","text":"Lead Sulfide (PbS) has garnered attention as a promising thermoelectric (TE) material due to its natural abundance and cost-effectiveness. However, its practical application is hindered by inherently high lattice thermal conductivity and low electrical conductivity. In this study, we address these challenges by surface functionalization of PbS nanocrystals using Cu2S molecular complexes-based ligand displacement. The molecular complexes facilitate the incorporation of Cu into the PbS matrix and leads to the formation of nanoscale defects, dislocations, and strain fields while optimizing the charge carrier transport. The structural modulations enhance the phonon scattering and lead to a significant reduction in lattice thermal conductivity of 0.60 W m−1K−1 at 867 K in the PbS-Cu2S system. Simultaneously, the Cu incorporation improves electrical conductivity by increasing both carrier concentration and mobility with carefully optimized the content of Cu2S molecular complexes. These synergistic modifications yield a peak figure-of-merit (zT) of 1.05 at 867 K for the PbS-1.0 %Cu2S sample, representing an almost twofold enhancement in TE performance compared to pristine PbS. This work highlights the effectiveness of surface treatment in overcoming the intrinsic limitations of PbS-based materials and presents a promising strategy for the development of high-efficiency TE systems."}],"pmid":1,"date_created":"2024-12-29T23:01:56Z","publisher":"Elsevier","language":[{"iso":"eng"}],"OA_type":"closed access","intvolume":"       683","publication":"Journal of Colloid and Interface Science","month":"04","status":"public","day":"01","acknowledgement":"Y.L. acknowledges funding from the National Natural Science Foundation of China (NSFC) (Grants No. 22209034), the Innovation and Entrepreneurship Project of Overseas Returnees in Anhui Province (Grant No. 2022LCX002) and the Fundamental Research Funds for the Central Universities (JZ2024HGTB0239). M.I. acknowledges financial support from ISTA and the Werner Siemens Foundation. K.H.L. acknowledges financial support from the National Natural Science Foundation of China (NSFC) (Grant No. 22208293). M.H acknowledges funding from Australian Research Council (FT230100316 and IH200100035) and iLAuNCH, Trailblazer Universities Program. L. H. and S. W. acknowledge the Fundamental Research Funds for the Central Universities (JZ2023HGTA0179, JZ2024HGTA0170).","publication_identifier":{"eissn":["1095-7103"],"issn":["0021-9797"]},"article_type":"original","external_id":{"pmid":["39706089"],"isi":["001393340800001"]},"author":[{"last_name":"Shu","first_name":"Haibo","full_name":"Shu, Haibo"},{"full_name":"Zhao, Mingjun","last_name":"Zhao","first_name":"Mingjun"},{"full_name":"Lu, Shaoqing","last_name":"Lu","first_name":"Shaoqing"},{"full_name":"Wan, Shanhong","first_name":"Shanhong","last_name":"Wan"},{"full_name":"Genç, Aziz","first_name":"Aziz","last_name":"Genç"},{"first_name":"Lulu","last_name":"Huang","full_name":"Huang, Lulu"},{"id":"43C61214-F248-11E8-B48F-1D18A9856A87","full_name":"Ibáñez, Maria","orcid":"0000-0001-5013-2843","last_name":"Ibáñez","first_name":"Maria"},{"full_name":"Lim, Khak Ho","last_name":"Lim","first_name":"Khak Ho"},{"full_name":"Hong, Min","first_name":"Min","last_name":"Hong"},{"id":"2A70014E-F248-11E8-B48F-1D18A9856A87","full_name":"Liu, Yu","first_name":"Yu","orcid":"0000-0001-7313-6740","last_name":"Liu"}],"title":"Influence of surface engineering on the transport properties of lead sulfide nanomaterials","date_updated":"2025-05-19T14:03:54Z","scopus_import":"1","department":[{"_id":"MaIb"}],"volume":683,"project":[{"_id":"9B8F7476-BA93-11EA-9121-9846C619BF3A","name":"HighTE: The Werner Siemens Laboratory for the High Throughput Discovery of Semiconductors for Waste Heat Recovery"}],"doi":"10.1016/j.jcis.2024.12.067","citation":{"chicago":"Shu, Haibo, Mingjun Zhao, Shaoqing Lu, Shanhong Wan, Aziz Genç, Lulu Huang, Maria Ibáñez, Khak Ho Lim, Min Hong, and Yu Liu. “Influence of Surface Engineering on the Transport Properties of Lead Sulfide Nanomaterials.” <i>Journal of Colloid and Interface Science</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.jcis.2024.12.067\">https://doi.org/10.1016/j.jcis.2024.12.067</a>.","short":"H. Shu, M. Zhao, S. Lu, S. Wan, A. Genç, L. Huang, M. Ibáñez, K.H. Lim, M. Hong, Y. Liu, Journal of Colloid and Interface Science 683 (2025) 703–712.","mla":"Shu, Haibo, et al. “Influence of Surface Engineering on the Transport Properties of Lead Sulfide Nanomaterials.” <i>Journal of Colloid and Interface Science</i>, vol. 683, Elsevier, 2025, pp. 703–12, doi:<a href=\"https://doi.org/10.1016/j.jcis.2024.12.067\">10.1016/j.jcis.2024.12.067</a>.","ieee":"H. Shu <i>et al.</i>, “Influence of surface engineering on the transport properties of lead sulfide nanomaterials,” <i>Journal of Colloid and Interface Science</i>, vol. 683. Elsevier, pp. 703–712, 2025.","ama":"Shu H, Zhao M, Lu S, et al. Influence of surface engineering on the transport properties of lead sulfide nanomaterials. <i>Journal of Colloid and Interface Science</i>. 2025;683:703-712. doi:<a href=\"https://doi.org/10.1016/j.jcis.2024.12.067\">10.1016/j.jcis.2024.12.067</a>","apa":"Shu, H., Zhao, M., Lu, S., Wan, S., Genç, A., Huang, L., … Liu, Y. (2025). Influence of surface engineering on the transport properties of lead sulfide nanomaterials. <i>Journal of Colloid and Interface Science</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jcis.2024.12.067\">https://doi.org/10.1016/j.jcis.2024.12.067</a>","ista":"Shu H, Zhao M, Lu S, Wan S, Genç A, Huang L, Ibáñez M, Lim KH, Hong M, Liu Y. 2025. Influence of surface engineering on the transport properties of lead sulfide nanomaterials. Journal of Colloid and Interface Science. 683, 703–712."},"_id":"18707","quality_controlled":"1","oa_version":"None"},{"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2025-01-21T00:00:00Z","publication_status":"published","year":"2025","article_processing_charge":"Yes (via OA deal)","file":[{"file_size":1270582,"content_type":"application/pdf","access_level":"open_access","relation":"main_file","date_created":"2025-04-16T09:46:45Z","creator":"dernst","checksum":"d035683179547b41b811107a8649aab0","file_name":"2025_PCCP_Hrast.pdf","date_updated":"2025-04-16T09:46:45Z","success":1,"file_id":"19581"}],"ec_funded":1,"type":"journal_article","isi":1,"oa":1,"page":"1473-1482","publication":"Physical Chemistry Chemical Physics","corr_author":"1","status":"public","month":"01","ddc":["530"],"issue":"3","OA_type":"hybrid","language":[{"iso":"eng"}],"intvolume":"        27","pmid":1,"date_created":"2024-12-29T23:01:58Z","abstract":[{"lang":"eng","text":"We present an ab initio theoretical method to calculate the resonant Auger spectrum in the presence of ultrafast dissociation. The method is demonstrated by deriving the L-VV resonant Auger spectrum mediated by the 2p3/2−1σ* resonance in HCl, where the electronic Auger decay and nuclear dissociation occur on the same time scale. The Auger decay rates are calculated within the one-center approximation and are shown to vary significantly with the inter-nuclear distance. A quantum-mechanical description of dissociation is effectuated by propagating the corresponding Franck–Condon factors. The calculated profiles of Auger spectral lines resemble those of atomic Auger decay but here the characteristic tails extend towards lower electron kinetic energies, which reflect specific features of the potential energy curves. The presented method can describe the resonant Auger spectrum for an arbitrary speed of dissociation and simplifies to known approximations in the limiting cases."}],"has_accepted_license":"1","publisher":"Royal Society of Chemistry","title":"Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl","date_updated":"2025-05-19T14:03:19Z","author":[{"full_name":"Hrast, Mateja","id":"48dbb294-2a9c-11ef-905d-f56be71f0e5d","first_name":"Mateja","last_name":"Hrast"},{"first_name":"Marko","orcid":"0000-0003-0038-7068","last_name":"Ljubotina","id":"F75EE9BE-5C90-11EA-905D-16643DDC885E","full_name":"Ljubotina, Marko"},{"full_name":"Zitnik, Matjaz","first_name":"Matjaz","last_name":"Zitnik"}],"OA_place":"publisher","license":"https://creativecommons.org/licenses/by-nc/3.0/","external_id":{"isi":["001379819100001"],"pmid":["39698879"]},"day":"21","article_type":"original","acknowledgement":"This publication is based upon work from COST Action CA18212 – Molecular Dynamics in the GAS phase (MD-GAS), supported by COST (European Cooperation in Science and Technology). This work was financially supported by the Slovenian Research Agency in the framework of research program P1-0112 Studies of Atoms, Molecules and Structures by Photons and Particles. Part of this work was financed by the European Research Council (ERC) through the Starting Grant No. 801770 (ANGULON). The authors acknowledge P. Lablanquie, H. Iwayama, F. Penent, K. Soejima and E. Shigemasa for sharing their unpublished experimental spectra on HCl.","related_material":{"record":[{"status":"public","relation":"research_data","id":"18716"}]},"file_date_updated":"2025-04-16T09:46:45Z","publication_identifier":{"issn":["1463-9076"]},"_id":"18710","quality_controlled":"1","oa_version":"Published Version","project":[{"grant_number":"801770","name":"Angulon: physics and applications of a new quasiparticle","_id":"2688CF98-B435-11E9-9278-68D0E5697425","call_identifier":"H2020"}],"doi":"10.1039/d4cp03727h","tmp":{"name":"Creative Commons Attribution-NonCommercial 3.0 Unported (CC BY-NC 3.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc/3.0/legalcode","short":"CC BY-NC (3.0)","image":"/images/cc_by_nc.png"},"citation":{"ieee":"M. Hrast, M. Ljubotina, and M. Zitnik, “Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl,” <i>Physical Chemistry Chemical Physics</i>, vol. 27, no. 3. Royal Society of Chemistry, pp. 1473–1482, 2025.","mla":"Hrast, Mateja, et al. “Ab Initio Auger Spectrum of the Ultrafast Dissociating 2p3/2−1σ* Resonance in HCl.” <i>Physical Chemistry Chemical Physics</i>, vol. 27, no. 3, Royal Society of Chemistry, 2025, pp. 1473–82, doi:<a href=\"https://doi.org/10.1039/d4cp03727h\">10.1039/d4cp03727h</a>.","ama":"Hrast M, Ljubotina M, Zitnik M. Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl. <i>Physical Chemistry Chemical Physics</i>. 2025;27(3):1473-1482. doi:<a href=\"https://doi.org/10.1039/d4cp03727h\">10.1039/d4cp03727h</a>","apa":"Hrast, M., Ljubotina, M., &#38; Zitnik, M. (2025). Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl. <i>Physical Chemistry Chemical Physics</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/d4cp03727h\">https://doi.org/10.1039/d4cp03727h</a>","ista":"Hrast M, Ljubotina M, Zitnik M. 2025. Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl. Physical Chemistry Chemical Physics. 27(3), 1473–1482.","chicago":"Hrast, Mateja, Marko Ljubotina, and Matjaz Zitnik. “Ab Initio Auger Spectrum of the Ultrafast Dissociating 2p3/2−1σ* Resonance in HCl.” <i>Physical Chemistry Chemical Physics</i>. Royal Society of Chemistry, 2025. <a href=\"https://doi.org/10.1039/d4cp03727h\">https://doi.org/10.1039/d4cp03727h</a>.","short":"M. Hrast, M. Ljubotina, M. Zitnik, Physical Chemistry Chemical Physics 27 (2025) 1473–1482."},"department":[{"_id":"MiLe"},{"_id":"MaSe"}],"scopus_import":"1","volume":27},{"ddc":["576"],"status":"public","corr_author":"1","month":"01","oa_version":"Published Version","acknowledged_ssus":[{"_id":"ScienComp"}],"_id":"18712","citation":{"ista":"Surendranadh P, Sachdeva H. 2025. Mathematica notebook and Fortran code for ‘Effect of assortative mating and sexual selection on polygenic barriers to gene flow’, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT:ISTA:17344\">10.15479/AT:ISTA:17344</a>.","ama":"Surendranadh P, Sachdeva H. Mathematica notebook and Fortran code for “Effect of assortative mating and sexual selection on polygenic barriers to gene flow.” 2025. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:17344\">10.15479/AT:ISTA:17344</a>","apa":"Surendranadh, P., &#38; Sachdeva, H. (2025). Mathematica notebook and Fortran code for “Effect of assortative mating and sexual selection on polygenic barriers to gene flow.” Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:17344\">https://doi.org/10.15479/AT:ISTA:17344</a>","mla":"Surendranadh, Parvathy, and Himani Sachdeva. <i>Mathematica Notebook and Fortran Code for “Effect of Assortative Mating and Sexual Selection on Polygenic Barriers to Gene Flow.”</i> Institute of Science and Technology Austria, 2025, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:17344\">10.15479/AT:ISTA:17344</a>.","ieee":"P. Surendranadh and H. Sachdeva, “Mathematica notebook and Fortran code for ‘Effect of assortative mating and sexual selection on polygenic barriers to gene flow.’” Institute of Science and Technology Austria, 2025.","short":"P. Surendranadh, H. Sachdeva, (2025).","chicago":"Surendranadh, Parvathy, and Himani Sachdeva. “Mathematica Notebook and Fortran Code for ‘Effect of Assortative Mating and Sexual Selection on Polygenic Barriers to Gene Flow.’” Institute of Science and Technology Austria, 2025. <a href=\"https://doi.org/10.15479/AT:ISTA:17344\">https://doi.org/10.15479/AT:ISTA:17344</a>."},"tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"doi":"10.15479/AT:ISTA:17344","publisher":"Institute of Science and Technology Austria","date_created":"2025-01-01T15:28:27Z","abstract":[{"text":"This file contains the code associated with the manuscript 'Effect of assortative mating and sexual selection on polygenic barriers to gene flow'. ","lang":"eng"}],"has_accepted_license":"1","department":[{"_id":"GradSch"},{"_id":"NiBa"}],"title":"Mathematica notebook and Fortran code for 'Effect of assortative mating and sexual selection on polygenic barriers to gene flow'","date_updated":"2025-12-30T08:44:12Z","date_published":"2025-01-07T00:00:00Z","user_id":"9947682f-b9fa-11ee-9c4a-b3ffaafe6614","author":[{"id":"455235B8-F248-11E8-B48F-1D18A9856A87","full_name":"Surendranadh, Parvathy","first_name":"Parvathy","orcid":"0000-0001-6395-386X","last_name":"Surendranadh"},{"full_name":"Sachdeva, Himani","last_name":"Sachdeva","first_name":"Himani"}],"file":[{"checksum":"9c5f91876014706990a0728c3675cd2a","file_name":"Codes.zip","creator":"psurendr","relation":"main_file","date_created":"2025-01-02T12:30:27Z","content_type":"application/zip","access_level":"open_access","file_size":326835,"success":1,"file_id":"18722","date_updated":"2025-01-02T12:30:27Z"},{"file_size":620,"access_level":"open_access","content_type":"text/plain","date_created":"2025-01-02T12:30:39Z","relation":"main_file","creator":"psurendr","checksum":"47fe98b7cc526e634e42de58f5eae288","file_name":"ReadMe.txt","date_updated":"2025-01-02T12:30:39Z","file_id":"18723","success":1}],"article_processing_charge":"No","year":"2025","oa":1,"type":"research_data","day":"07","related_material":{"record":[{"status":"public","relation":"used_in_publication","id":"19876"}]},"file_date_updated":"2025-01-02T12:30:39Z"},{"date_updated":"2025-05-19T14:06:00Z","title":"On heroes in digraphs with forbidden induced forests","author":[{"full_name":"Carbonero, Alvaro","last_name":"Carbonero","first_name":"Alvaro"},{"full_name":"Koerts, Hidde","first_name":"Hidde","last_name":"Koerts"},{"id":"6dc1a1be-bf1c-11ed-8d2b-d044840f49d6","full_name":"Moore, Benjamin","last_name":"Moore","first_name":"Benjamin"},{"first_name":"Sophie","last_name":"Spirkl","full_name":"Spirkl, Sophie"}],"external_id":{"isi":["001400113700001"],"arxiv":["2306.04710"]},"OA_place":"publisher","arxiv":1,"article_type":"original","file_date_updated":"2025-04-16T09:16:25Z","publication_identifier":{"issn":["0195-6698"]},"acknowledgement":"We thank the anonymous referees for their careful proofreading which helped improve the presentation of this paper. We also thank one of the anonymous referees for pointing out our construction implies Theorem 1.7!\r\nBenjamin Moore finished this project while a postdoctoral researcher at Charles University, and was supported by project 22-17398S (Flows and cycles in graphs on surfaces) of the Czech Science Foundation. Benjamin Moore is currently funded by RANDSTRUCT No. 101076777, and appreciates the gracious support. We acknowledge the support of the Natural Sciences and Engineering Research Council of Canada (NSERC), [funding reference number RGPIN-2020-03912]. Cette recherche a été financée par le Conseil de recherches en sciences naturelles et en génie du Canada (CRSNG), [numéro de référence RGPIN-2020-03912]. This project was funded in part by the Government of Ontario .","day":"01","oa_version":"Published Version","quality_controlled":"1","_id":"18753","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"chicago":"Carbonero, Alvaro, Hidde Koerts, Benjamin Moore, and Sophie Spirkl. “On Heroes in Digraphs with Forbidden Induced Forests.” <i>European Journal of Combinatorics</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.ejc.2024.104104\">https://doi.org/10.1016/j.ejc.2024.104104</a>.","short":"A. Carbonero, H. Koerts, B. Moore, S. Spirkl, European Journal of Combinatorics 125 (2025).","ieee":"A. Carbonero, H. Koerts, B. Moore, and S. Spirkl, “On heroes in digraphs with forbidden induced forests,” <i>European Journal of Combinatorics</i>, vol. 125. Elsevier, 2025.","mla":"Carbonero, Alvaro, et al. “On Heroes in Digraphs with Forbidden Induced Forests.” <i>European Journal of Combinatorics</i>, vol. 125, 104104, Elsevier, 2025, doi:<a href=\"https://doi.org/10.1016/j.ejc.2024.104104\">10.1016/j.ejc.2024.104104</a>.","ista":"Carbonero A, Koerts H, Moore B, Spirkl S. 2025. On heroes in digraphs with forbidden induced forests. European Journal of Combinatorics. 125, 104104.","apa":"Carbonero, A., Koerts, H., Moore, B., &#38; Spirkl, S. (2025). On heroes in digraphs with forbidden induced forests. <i>European Journal of Combinatorics</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.ejc.2024.104104\">https://doi.org/10.1016/j.ejc.2024.104104</a>","ama":"Carbonero A, Koerts H, Moore B, Spirkl S. On heroes in digraphs with forbidden induced forests. <i>European Journal of Combinatorics</i>. 2025;125. doi:<a href=\"https://doi.org/10.1016/j.ejc.2024.104104\">10.1016/j.ejc.2024.104104</a>"},"doi":"10.1016/j.ejc.2024.104104","project":[{"_id":"bd95085b-d553-11ed-ba76-e55d3349be45","grant_number":"101076777","name":"Randomness and structure in combinatorics"}],"volume":125,"department":[{"_id":"MaKw"}],"scopus_import":"1","date_published":"2025-03-01T00:00:00Z","article_number":"104104","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file":[{"file_id":"19577","success":1,"date_updated":"2025-04-16T09:16:25Z","checksum":"2c75f78f40ebb93d16fe3765bda2905a","creator":"dernst","file_name":"2025_EuropJournCombinatorics_Carbonero.pdf","relation":"main_file","date_created":"2025-04-16T09:16:25Z","content_type":"application/pdf","access_level":"open_access","file_size":1110657}],"article_processing_charge":"Yes (in subscription journal)","year":"2025","publication_status":"published","oa":1,"type":"journal_article","isi":1,"publication":"European Journal of Combinatorics","status":"public","ddc":["510"],"month":"03","corr_author":"1","intvolume":"       125","language":[{"iso":"eng"}],"OA_type":"hybrid","publisher":"Elsevier","date_created":"2025-01-05T23:01:55Z","abstract":[{"lang":"eng","text":"We continue a line of research which studies which hereditary families of digraphs have bounded dichromatic number. For a class of digraphs  C, a hero in  C  is any digraph  H\r\n  such that  H -free digraphs in  C  have bounded dichromatic number. We show that if  F\r\n  is an oriented star of degree at least five, the only heroes for the class of  F -free digraphs are transitive tournaments. For oriented stars  F  of degree exactly four, we show the only heroes in  F -free digraphs are transitive tournaments, or possibly special joins of transitive tournaments. Aboulker et al. characterized the set of heroes of  {H,K1+P2→} -free digraphs almost completely, and we show the same characterization for the class of  {H,rK1+P3→} -free digraphs. Lastly, we show that if we forbid two \"valid\" orientations of brooms, then every transitive tournament is a hero for this class of digraphs."}],"has_accepted_license":"1"},{"intvolume":"       112","OA_type":"hybrid","language":[{"iso":"eng"}],"publisher":"Elsevier","date_created":"2025-01-05T23:01:56Z","abstract":[{"text":"Exploring the molecular correlates of metabolic health measures may identify their shared and unique biological processes and pathways. Molecular proxies of these traits may also provide a more objective approach to their measurement. Here, DNA methylation (DNAm) data were used in epigenome-wide association studies (EWASs) and for training epigenetic scores (EpiScores) of six metabolic traits: body mass index (BMI), body fat percentage, waist-hip ratio, and blood-based measures of glucose, high-density lipoprotein cholesterol, and total cholesterol in >17,000 volunteers from the Generation Scotland (GS) cohort. We observed a maximum of 12,033 significant findings (p < 3.6 × 10−8) for BMI in a marginal linear regression EWAS. By contrast, a joint and conditional Bayesian penalized regression approach yielded 27 high-confidence associations with BMI. EpiScores trained in GS performed well in both Scottish and Singaporean test cohorts (Lothian Birth Cohort 1936 [LBC1936] and Health for Life in Singapore [HELIOS]). The EpiScores for BMI and total cholesterol performed best in HELIOS, explaining 20.8% and 7.1% of the variance in the measured traits, respectively. The corresponding results in LBC1936 were 14.4% and 3.2%, respectively. Differences were observed in HELIOS for body fat, where the EpiScore explained ∼9% of the variance in Chinese and Malay -subgroups but ∼3% in the Indian subgroup. The EpiScores also correlated with cognitive function in LBC1936 (standardized βrange: 0.08–0.12, false discovery rate p [pFDR] < 0.05). Accounting for the correlation structure across the methylome can vastly affect the number of lead findings in EWASs. The EpiScores of metabolic traits are broadly applicable across populations and can reflect differences in cognition.","lang":"eng"}],"pmid":1,"has_accepted_license":"1","status":"public","publication":"American Journal of Human Genetics","ddc":["570"],"month":"01","issue":"1","oa":1,"type":"journal_article","isi":1,"page":"106-115","date_published":"2025-01-02T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","file":[{"relation":"main_file","date_created":"2025-01-08T09:26:42Z","file_name":"2025_AJHG_Smith.pdf","creator":"dernst","checksum":"891d120554f07da2c35d38388c29a690","file_size":2266488,"content_type":"application/pdf","access_level":"open_access","success":1,"file_id":"18776","date_updated":"2025-01-08T09:26:42Z"}],"article_processing_charge":"No","year":"2025","publication_status":"published","tmp":{"image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"citation":{"ama":"Smith HM, Ng HK, Moodie JE, et al. DNA methylation-based predictors of metabolic traits in Scottish and Singaporean cohorts. <i>American Journal of Human Genetics</i>. 2025;112(1):106-115. doi:<a href=\"https://doi.org/10.1016/j.ajhg.2024.11.012\">10.1016/j.ajhg.2024.11.012</a>","ista":"Smith HM, Ng HK, Moodie JE, Gadd DA, Mccartney DL, Bernabeu E, Campbell A, Redmond P, Taylor A, Page D, Corley J, Harris SE, Tay D, Deary IJ, Evans KL, Robinson MR, Chambers JC, Loh M, Cox SR, Marioni RE, Hillary RF. 2025. DNA methylation-based predictors of metabolic traits in Scottish and Singaporean cohorts. American Journal of Human Genetics. 112(1), 106–115.","apa":"Smith, H. M., Ng, H. K., Moodie, J. E., Gadd, D. A., Mccartney, D. L., Bernabeu, E., … Hillary, R. F. (2025). DNA methylation-based predictors of metabolic traits in Scottish and Singaporean cohorts. <i>American Journal of Human Genetics</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.ajhg.2024.11.012\">https://doi.org/10.1016/j.ajhg.2024.11.012</a>","ieee":"H. M. Smith <i>et al.</i>, “DNA methylation-based predictors of metabolic traits in Scottish and Singaporean cohorts,” <i>American Journal of Human Genetics</i>, vol. 112, no. 1. Elsevier, pp. 106–115, 2025.","mla":"Smith, Hannah M., et al. “DNA Methylation-Based Predictors of Metabolic Traits in Scottish and Singaporean Cohorts.” <i>American Journal of Human Genetics</i>, vol. 112, no. 1, Elsevier, 2025, pp. 106–15, doi:<a href=\"https://doi.org/10.1016/j.ajhg.2024.11.012\">10.1016/j.ajhg.2024.11.012</a>.","short":"H.M. Smith, H.K. Ng, J.E. Moodie, D.A. Gadd, D.L. Mccartney, E. Bernabeu, A. Campbell, P. Redmond, A. Taylor, D. Page, J. Corley, S.E. Harris, D. Tay, I.J. Deary, K.L. Evans, M.R. Robinson, J.C. Chambers, M. Loh, S.R. Cox, R.E. Marioni, R.F. Hillary, American Journal of Human Genetics 112 (2025) 106–115.","chicago":"Smith, Hannah M., Hong Kiat Ng, Joanna E. Moodie, Danni A. Gadd, Daniel L. Mccartney, Elena Bernabeu, Archie Campbell, et al. “DNA Methylation-Based Predictors of Metabolic Traits in Scottish and Singaporean Cohorts.” <i>American Journal of Human Genetics</i>. Elsevier, 2025. <a href=\"https://doi.org/10.1016/j.ajhg.2024.11.012\">https://doi.org/10.1016/j.ajhg.2024.11.012</a>."},"doi":"10.1016/j.ajhg.2024.11.012","volume":112,"scopus_import":"1","department":[{"_id":"MaRo"}],"quality_controlled":"1","oa_version":"Published Version","_id":"18754","external_id":{"isi":["001412498600001"],"pmid":["39706196"]},"OA_place":"publisher","file_date_updated":"2025-01-08T09:26:42Z","publication_identifier":{"issn":["0002-9297"],"eissn":["1537-6605"]},"article_type":"original","related_material":{"link":[{"relation":"software","url":"https://github.com/marioni-group/Metabolic_trait"}]},"day":"02","date_updated":"2025-02-27T12:38:23Z","title":"DNA methylation-based predictors of metabolic traits in Scottish and Singaporean cohorts","author":[{"full_name":"Smith, Hannah M.","last_name":"Smith","first_name":"Hannah M."},{"last_name":"Ng","first_name":"Hong Kiat","full_name":"Ng, Hong Kiat"},{"last_name":"Moodie","first_name":"Joanna E.","full_name":"Moodie, Joanna E."},{"full_name":"Gadd, Danni A.","first_name":"Danni A.","last_name":"Gadd"},{"first_name":"Daniel L.","last_name":"Mccartney","full_name":"Mccartney, Daniel L."},{"full_name":"Bernabeu, Elena","first_name":"Elena","last_name":"Bernabeu"},{"last_name":"Campbell","first_name":"Archie","full_name":"Campbell, Archie"},{"first_name":"Paul","last_name":"Redmond","full_name":"Redmond, Paul"},{"full_name":"Taylor, Adele","last_name":"Taylor","first_name":"Adele"},{"first_name":"Danielle","last_name":"Page","full_name":"Page, Danielle"},{"full_name":"Corley, Janie","last_name":"Corley","first_name":"Janie"},{"full_name":"Harris, Sarah E.","first_name":"Sarah E.","last_name":"Harris"},{"first_name":"Darwin","last_name":"Tay","full_name":"Tay, Darwin"},{"full_name":"Deary, Ian J.","last_name":"Deary","first_name":"Ian J."},{"last_name":"Evans","first_name":"Kathryn L.","full_name":"Evans, Kathryn L."},{"first_name":"Matthew Richard","last_name":"Robinson","orcid":"0000-0001-8982-8813","full_name":"Robinson, Matthew Richard","id":"E5D42276-F5DA-11E9-8E24-6303E6697425"},{"first_name":"John C.","last_name":"Chambers","full_name":"Chambers, John C."},{"last_name":"Loh","first_name":"Marie","full_name":"Loh, Marie"},{"last_name":"Cox","first_name":"Simon R.","full_name":"Cox, Simon R."},{"full_name":"Marioni, Riccardo E.","last_name":"Marioni","first_name":"Riccardo E."},{"last_name":"Hillary","first_name":"Robert F.","full_name":"Hillary, Robert F."}]},{"project":[{"call_identifier":"H2020","_id":"260C2330-B435-11E9-9278-68D0E5697425","name":"ISTplus - Postdoctoral Fellowships","grant_number":"754411"}],"citation":{"ama":"Cheung GT, Pauler F, Hippenmeyer S. Probing Cell-Type Specificity of Mutant Phenotype at Transcriptomic Level Using Mosaic Analysis with Double Markers (MADM). In: Garcia-Marques J, Lee T, eds. <i>Lineage Tracing</i>. Vol 2886. MIMB. New York, NY: Springer Nature; 2025:139-151. doi:<a href=\"https://doi.org/10.1007/978-1-0716-4310-5_7\">10.1007/978-1-0716-4310-5_7</a>","apa":"Cheung, G. T., Pauler, F., &#38; Hippenmeyer, S. (2025). Probing Cell-Type Specificity of Mutant Phenotype at Transcriptomic Level Using Mosaic Analysis with Double Markers (MADM). In J. Garcia-Marques &#38; T. Lee (Eds.), <i>Lineage Tracing</i> (Vol. 2886, pp. 139–151). New York, NY: Springer Nature. <a href=\"https://doi.org/10.1007/978-1-0716-4310-5_7\">https://doi.org/10.1007/978-1-0716-4310-5_7</a>","ista":"Cheung GT, Pauler F, Hippenmeyer S. 2025.Probing Cell-Type Specificity of Mutant Phenotype at Transcriptomic Level Using Mosaic Analysis with Double Markers (MADM). In: Lineage Tracing. Methods in Molecular Biology, vol. 2886, 139–151.","ieee":"G. T. Cheung, F. Pauler, and S. Hippenmeyer, “Probing Cell-Type Specificity of Mutant Phenotype at Transcriptomic Level Using Mosaic Analysis with Double Markers (MADM),” in <i>Lineage Tracing</i>, vol. 2886, J. Garcia-Marques and T. Lee, Eds. New York, NY: Springer Nature, 2025, pp. 139–151.","mla":"Cheung, Giselle T., et al. “Probing Cell-Type Specificity of Mutant Phenotype at Transcriptomic Level Using Mosaic Analysis with Double Markers (MADM).” <i>Lineage Tracing</i>, edited by Jorge Garcia-Marques and Tzumin Lee, vol. 2886, Springer Nature, 2025, pp. 139–51, doi:<a href=\"https://doi.org/10.1007/978-1-0716-4310-5_7\">10.1007/978-1-0716-4310-5_7</a>.","short":"G.T. Cheung, F. Pauler, S. Hippenmeyer, in:, J. Garcia-Marques, T. Lee (Eds.), Lineage Tracing, Springer Nature, New York, NY, 2025, pp. 139–151.","chicago":"Cheung, Giselle T, Florian Pauler, and Simon Hippenmeyer. “Probing Cell-Type Specificity of Mutant Phenotype at Transcriptomic Level Using Mosaic Analysis with Double Markers (MADM).” In <i>Lineage Tracing</i>, edited by Jorge Garcia-Marques and Tzumin Lee, 2886:139–51. MIMB. New York, NY: Springer Nature, 2025. <a href=\"https://doi.org/10.1007/978-1-0716-4310-5_7\">https://doi.org/10.1007/978-1-0716-4310-5_7</a>."},"doi":"10.1007/978-1-0716-4310-5_7","scopus_import":"1","department":[{"_id":"SiHi"}],"volume":2886,"_id":"18765","quality_controlled":"1","oa_version":"None","external_id":{"pmid":["39745639"]},"day":"03","publication_identifier":{"eissn":["1940-6029"],"issn":["1064-3745"],"eisbn":["9781071643105"],"isbn":["9781071643099"]},"acknowledgement":"We thank all Hippenmeyer lab members for support and discussions. Experimental steps described were optimized with support provided by the Imaging & Optics Facility (IOF) and Preclinical Facility (PCF) at ISTA, Vienna BioCenter Core Facilities (VBCF), and Christoph Bock lab at Center for Molecular Medicine (CeMM). G.C. received funding from European Commission (IST plus postdoctoral fellowship). This work was supported by ISTA institutional funds: The Austrian Science Fund Special Research Programmes (FWF SFB F78 Neuro Stem Modulation) to S.H.","title":"Probing Cell-Type Specificity of Mutant Phenotype at Transcriptomic Level Using Mosaic Analysis with Double Markers (MADM)","date_updated":"2025-04-14T07:43:46Z","author":[{"id":"471195F6-F248-11E8-B48F-1D18A9856A87","full_name":"Cheung, Giselle T","orcid":"0000-0001-8457-2572","last_name":"Cheung","first_name":"Giselle T"},{"orcid":"0000-0002-7462-0048","last_name":"Pauler","first_name":"Florian","id":"48EA0138-F248-11E8-B48F-1D18A9856A87","full_name":"Pauler, Florian"},{"last_name":"Hippenmeyer","orcid":"0000-0003-2279-1061","first_name":"Simon","full_name":"Hippenmeyer, Simon","id":"37B36620-F248-11E8-B48F-1D18A9856A87"}],"OA_type":"closed access","language":[{"iso":"eng"}],"intvolume":"      2886","date_created":"2025-01-07T08:36:47Z","abstract":[{"text":"Mosaic Analysis with Double Markers (MADM) represents a mouse genetic approach coupling differential fluorescent labeling to genetic manipulations in dividing cells and their lineages. MADM uniquely enables the generation and visualization of individual control or homozygous mutant cells in a heterozygous genetic environment. Among its diverse applications, MADM has been used to dissect cell-autonomous gene functions important for cortical development and neural development in general. The high cellular resolution offered by MADM also permits the analysis of transcriptomic changes of individual cells upon genetic manipulations. In this chapter, we describe an experimental protocol combining the generation and isolation of MADM-labeled cells with downstream single-cell RNA-sequencing technologies to probe cell-type specific phenotypes due to genetic mutations at single-cell resolution.","lang":"eng"}],"pmid":1,"alternative_title":["Methods in Molecular Biology"],"publisher":"Springer Nature","publication":"Lineage Tracing","status":"public","month":"01","corr_author":"1","acknowledged_ssus":[{"_id":"Bio"}],"type":"book_chapter","ec_funded":1,"editor":[{"first_name":"Jorge","last_name":"Garcia-Marques","full_name":"Garcia-Marques, Jorge"},{"first_name":"Tzumin","last_name":"Lee","full_name":"Lee, Tzumin"}],"page":"139-151","place":"New York, NY","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2025-01-03T00:00:00Z","publication_status":"published","year":"2025","article_processing_charge":"No","series_title":"MIMB"}]