[{"extern":1,"date_created":"2018-12-11T11:51:16Z","issue":"2016JULY","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)"},"citation":{"apa":"Jösch, M. A., Mankus, D., Yamagata, M., Shahbazi, A., Schalek, R., Suissa Peleg, A., … Sanes, J. (2016). Reconstruction of genetically identified neurons imaged by serial-section electron microscopy. <i>ELife</i>. eLife Sciences Publications. <a href=\"https://doi.org/10.7554/eLife.15015\">https://doi.org/10.7554/eLife.15015</a>","short":"M.A. Jösch, D. Mankus, M. Yamagata, A. Shahbazi, R. Schalek, A. Suissa Peleg, M. Meister, J. Lichtman, W. Scheirer, J. Sanes, ELife 5 (2016).","ama":"Jösch MA, Mankus D, Yamagata M, et al. Reconstruction of genetically identified neurons imaged by serial-section electron microscopy. <i>eLife</i>. 2016;5(2016JULY). doi:<a href=\"https://doi.org/10.7554/eLife.15015\">10.7554/eLife.15015</a>","mla":"Jösch, Maximilian A., et al. “Reconstruction of Genetically Identified Neurons Imaged by Serial-Section Electron Microscopy.” <i>ELife</i>, vol. 5, no. 2016JULY, eLife Sciences Publications, 2016, doi:<a href=\"https://doi.org/10.7554/eLife.15015\">10.7554/eLife.15015</a>.","ista":"Jösch MA, Mankus D, Yamagata M, Shahbazi A, Schalek R, Suissa Peleg A, Meister M, Lichtman J, Scheirer W, Sanes J. 2016. Reconstruction of genetically identified neurons imaged by serial-section electron microscopy. eLife. 5(2016JULY).","chicago":"Jösch, Maximilian A, David Mankus, Masahito Yamagata, Ali Shahbazi, Richard Schalek, Adi Suissa Peleg, Markus Meister, Jeff Lichtman, Walter Scheirer, and Joshua Sanes. “Reconstruction of Genetically Identified Neurons Imaged by Serial-Section Electron Microscopy.” <i>ELife</i>. eLife Sciences Publications, 2016. <a href=\"https://doi.org/10.7554/eLife.15015\">https://doi.org/10.7554/eLife.15015</a>.","ieee":"M. A. Jösch <i>et al.</i>, “Reconstruction of genetically identified neurons imaged by serial-section electron microscopy,” <i>eLife</i>, vol. 5, no. 2016JULY. eLife Sciences Publications, 2016."},"publisher":"eLife Sciences Publications","intvolume":"         5","abstract":[{"text":"Resolving patterns of synaptic connectivity in neural circuits currently requires serial section electron microscopy. However, complete circuit reconstruction is prohibitively slow and may not be necessary for many purposes such as comparing neuronal structure and connectivity among multiple animals. Here, we present an alternative strategy, targeted reconstruction of specific neuronal types. We used viral vectors to deliver peroxidase derivatives, which catalyze production of an electron-dense tracer, to genetically identify neurons, and developed a protocol that enhances the electron-density of the labeled cells while retaining the quality of the ultrastructure. The high contrast of the marked neurons enabled two innovations that speed data acquisition: targeted high-resolution reimaging of regions selected from rapidly-acquired lower resolution reconstruction, and an unsupervised segmentation algorithm. This pipeline reduces imaging and reconstruction times by two orders of magnitude, facilitating directed inquiry of circuit motifs.","lang":"eng"}],"type":"journal_article","date_updated":"2021-01-12T06:49:46Z","author":[{"full_name":"Maximilian Jösch","first_name":"Maximilian A","id":"2BD278E6-F248-11E8-B48F-1D18A9856A87","last_name":"Jösch","orcid":"0000-0002-3937-1330"},{"first_name":"David","full_name":"Mankus, David","last_name":"Mankus"},{"full_name":"Yamagata, Masahito","first_name":"Masahito","last_name":"Yamagata"},{"last_name":"Shahbazi","full_name":"Shahbazi, Ali","first_name":"Ali"},{"last_name":"Schalek","first_name":"Richard","full_name":"Schalek, Richard L"},{"last_name":"Suissa Peleg","first_name":"Adi","full_name":"Suissa-Peleg, Adi"},{"first_name":"Markus","full_name":"Meister, Markus","last_name":"Meister"},{"last_name":"Lichtman","first_name":"Jeff","full_name":"Lichtman, Jeff W"},{"last_name":"Scheirer","first_name":"Walter","full_name":"Scheirer, Walter J"},{"last_name":"Sanes","full_name":"Sanes, Joshua R","first_name":"Joshua"}],"year":"2016","day":"07","quality_controlled":0,"month":"07","publist_id":"5965","publication_status":"published","publication":"eLife","title":"Reconstruction of genetically identified neurons imaged by serial-section electron microscopy","volume":5,"status":"public","acknowledgement":"This work was supported by NIH grant NS76467 to MM, JL and JRS, an HHMI Collaborative Innovation Award to JRS, an IARPA contract #D16PC00002 to WJS and by The International Human Frontier Science Program Organization fellowship to MJ.","doi":"10.7554/eLife.15015","date_published":"2016-07-07T00:00:00Z","_id":"1306"},{"issue":"4","extern":1,"date_created":"2018-12-11T11:51:19Z","type":"journal_article","abstract":[{"lang":"eng","text":"We prove optimal second order convergence of a modified lowest-order Brezzi-Douglas-Marini (BDM1) mixed finite element scheme for advection-diffusion problems in divergence form. If advection is present, it is known that the total flux is approximated only with first-order accuracy by the classical BDM1 mixed method, which is suboptimal since the same order of convergence is obtained if the computationally less expensive Raviart-Thomas (RT0) element is used. The modification that was first proposed by Brunner et al. [Adv. Water Res., 35 (2012),pp. 163-171] is based on the hybrid problem formulation and consists in using the Lagrange multipliers for the discretization of the advective term instead of the cellwise constant approximation of the scalar unknown."}],"date_updated":"2021-01-12T06:49:49Z","year":"2016","author":[{"first_name":"Fabian","full_name":"Brunner, Fabian","last_name":"Brunner"},{"id":"2C12A0B0-F248-11E8-B48F-1D18A9856A87","full_name":"Julian Fischer","first_name":"Julian L","orcid":"0000-0002-0479-558X","last_name":"Fischer"},{"last_name":"Knabner","first_name":"Peter","full_name":"Knabner, Peter"}],"publisher":"Society for Industrial and Applied Mathematics ","intvolume":"        54","page":"2359 - 2378","citation":{"mla":"Brunner, Fabian, et al. “Analysis of a Modified Second-Order Mixed Hybrid BDM1 Finite Element Method for Transport Problems in Divergence Form.” <i>SIAM Journal on Numerical Analysis</i>, vol. 54, no. 4, Society for Industrial and Applied Mathematics , 2016, pp. 2359–78, doi:<a href=\"https://doi.org/10.1137/15M1035379\">10.1137/15M1035379</a>.","ista":"Brunner F, Fischer JL, Knabner P. 2016. Analysis of a modified second-order mixed hybrid BDM1 finite element method for transport problems in divergence form. SIAM Journal on Numerical Analysis. 54(4), 2359–2378.","ieee":"F. Brunner, J. L. Fischer, and P. Knabner, “Analysis of a modified second-order mixed hybrid BDM1 finite element method for transport problems in divergence form,” <i>SIAM Journal on Numerical Analysis</i>, vol. 54, no. 4. Society for Industrial and Applied Mathematics , pp. 2359–2378, 2016.","chicago":"Brunner, Fabian, Julian L Fischer, and Peter Knabner. “Analysis of a Modified Second-Order Mixed Hybrid BDM1 Finite Element Method for Transport Problems in Divergence Form.” <i>SIAM Journal on Numerical Analysis</i>. Society for Industrial and Applied Mathematics , 2016. <a href=\"https://doi.org/10.1137/15M1035379\">https://doi.org/10.1137/15M1035379</a>.","apa":"Brunner, F., Fischer, J. L., &#38; Knabner, P. (2016). Analysis of a modified second-order mixed hybrid BDM1 finite element method for transport problems in divergence form. <i>SIAM Journal on Numerical Analysis</i>. Society for Industrial and Applied Mathematics . <a href=\"https://doi.org/10.1137/15M1035379\">https://doi.org/10.1137/15M1035379</a>","short":"F. Brunner, J.L. Fischer, P. Knabner, SIAM Journal on Numerical Analysis 54 (2016) 2359–2378.","ama":"Brunner F, Fischer JL, Knabner P. Analysis of a modified second-order mixed hybrid BDM1 finite element method for transport problems in divergence form. <i>SIAM Journal on Numerical Analysis</i>. 2016;54(4):2359-2378. doi:<a href=\"https://doi.org/10.1137/15M1035379\">10.1137/15M1035379</a>"},"publication_status":"published","publist_id":"5954","quality_controlled":0,"month":"01","day":"01","doi":"10.1137/15M1035379","date_published":"2016-01-01T00:00:00Z","_id":"1315","status":"public","publication":"SIAM Journal on Numerical Analysis","title":"Analysis of a modified second-order mixed hybrid BDM1 finite element method for transport problems in divergence form","volume":54},{"intvolume":"        33","publisher":"Elsevier","year":"2016","author":[{"full_name":"Julian Fischer","first_name":"Julian L","id":"2C12A0B0-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-0479-558X","last_name":"Fischer"}],"date_updated":"2021-01-12T06:49:50Z","type":"journal_article","abstract":[{"lang":"eng","text":"We analyze the behaviour of free boundaries in thin-film flow in the regime of strong slippage n∈[1,2) and in the regime of very weak slippage n∈,3) qualitatively and quantitatively. In the regime of strong slippage, we construct initial data which are bounded from above by the steady state but for which nevertheless instantaneous forward motion of the free boundary occurs. This shows that the initial behaviour of the free boundary is not determined just by the growth of the initial data at the free boundary. Note that this is a new phenomenon for degenerate parabolic equations which is specific for higher-order equations. Furthermore, this result resolves a controversy in the literature over optimality of sufficient conditions for the occurrence of a waiting time phenomenon. In contrast, in the regime of very weak slippage we derive lower bounds on free boundary propagation which are optimal in the sense that they coincide up to a constant factor with the known upper bounds. In particular, in this regime the growth of the initial data at the free boundary fully determines the initial behaviour of the interface."}],"citation":{"ista":"Fischer JL. 2016. Behaviour of free boundaries in thin-film flow: The regime of strong slippage and the regime of very weak slippage. Annales de l’Institut Henri Poincare (C) Non Linear Analysis. 33(5), 1301–1327.","mla":"Fischer, Julian L. “Behaviour of Free Boundaries in Thin-Film Flow: The Regime of Strong Slippage and the Regime of Very Weak Slippage.” <i>Annales de l’Institut Henri Poincare (C) Non Linear Analysis</i>, vol. 33, no. 5, Elsevier, 2016, pp. 1301–27, doi:<a href=\"https://doi.org/10.1016/j.anihpc.2015.05.001\">10.1016/j.anihpc.2015.05.001</a>.","chicago":"Fischer, Julian L. “Behaviour of Free Boundaries in Thin-Film Flow: The Regime of Strong Slippage and the Regime of Very Weak Slippage.” <i>Annales de l’Institut Henri Poincare (C) Non Linear Analysis</i>. Elsevier, 2016. <a href=\"https://doi.org/10.1016/j.anihpc.2015.05.001\">https://doi.org/10.1016/j.anihpc.2015.05.001</a>.","ieee":"J. L. Fischer, “Behaviour of free boundaries in thin-film flow: The regime of strong slippage and the regime of very weak slippage,” <i>Annales de l’Institut Henri Poincare (C) Non Linear Analysis</i>, vol. 33, no. 5. Elsevier, pp. 1301–1327, 2016.","apa":"Fischer, J. L. (2016). Behaviour of free boundaries in thin-film flow: The regime of strong slippage and the regime of very weak slippage. <i>Annales de l’Institut Henri Poincare (C) Non Linear Analysis</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.anihpc.2015.05.001\">https://doi.org/10.1016/j.anihpc.2015.05.001</a>","short":"J.L. Fischer, Annales de l’Institut Henri Poincare (C) Non Linear Analysis 33 (2016) 1301–1327.","ama":"Fischer JL. Behaviour of free boundaries in thin-film flow: The regime of strong slippage and the regime of very weak slippage. <i>Annales de l’Institut Henri Poincare (C) Non Linear Analysis</i>. 2016;33(5):1301-1327. doi:<a href=\"https://doi.org/10.1016/j.anihpc.2015.05.001\">10.1016/j.anihpc.2015.05.001</a>"},"page":"1301 - 1327","issue":"5","date_created":"2018-12-11T11:51:20Z","extern":1,"acknowledgement":"This research was partly supported by the Lithuanian–Swiss cooperation program under the project agreement No. CH-SMM-01/0.","_id":"1317","date_published":"2016-09-01T00:00:00Z","doi":"10.1016/j.anihpc.2015.05.001","volume":33,"publication":"Annales de l'Institut Henri Poincare (C) Non Linear Analysis","title":"Behaviour of free boundaries in thin-film flow: The regime of strong slippage and the regime of very weak slippage","status":"public","month":"09","quality_controlled":0,"publist_id":"5952","publication_status":"published","day":"01"},{"date_created":"2018-12-11T11:51:20Z","extern":1,"issue":"7","citation":{"ista":"Fischer JL, Otto F. 2016. A higher-order large scale regularity theory for random elliptic operators. Communications in Partial Differential Equations. 41(7), 1108–1148.","mla":"Fischer, Julian L., and Felix Otto. “A Higher-Order Large Scale Regularity Theory for Random Elliptic Operators.” <i>Communications in Partial Differential Equations</i>, vol. 41, no. 7, Taylor &#38; Francis, 2016, pp. 1108–48, doi:<a href=\"https://doi.org/10.1080/03605302.2016.1179318\">10.1080/03605302.2016.1179318</a>.","ieee":"J. L. Fischer and F. Otto, “A higher-order large scale regularity theory for random elliptic operators,” <i>Communications in Partial Differential Equations</i>, vol. 41, no. 7. Taylor &#38; Francis, pp. 1108–1148, 2016.","chicago":"Fischer, Julian L, and Felix Otto. “A Higher-Order Large Scale Regularity Theory for Random Elliptic Operators.” <i>Communications in Partial Differential Equations</i>. Taylor &#38; Francis, 2016. <a href=\"https://doi.org/10.1080/03605302.2016.1179318\">https://doi.org/10.1080/03605302.2016.1179318</a>.","short":"J.L. Fischer, F. Otto, Communications in Partial Differential Equations 41 (2016) 1108–1148.","ama":"Fischer JL, Otto F. A higher-order large scale regularity theory for random elliptic operators. <i>Communications in Partial Differential Equations</i>. 2016;41(7):1108-1148. doi:<a href=\"https://doi.org/10.1080/03605302.2016.1179318\">10.1080/03605302.2016.1179318</a>","apa":"Fischer, J. L., &#38; Otto, F. (2016). A higher-order large scale regularity theory for random elliptic operators. <i>Communications in Partial Differential Equations</i>. Taylor &#38; Francis. <a href=\"https://doi.org/10.1080/03605302.2016.1179318\">https://doi.org/10.1080/03605302.2016.1179318</a>"},"main_file_link":[{"url":"https://arxiv.org/abs/1503.07578","open_access":"1"}],"page":"1108 - 1148","publisher":"Taylor & Francis","intvolume":"        41","type":"journal_article","date_updated":"2021-01-12T06:49:50Z","abstract":[{"lang":"eng","text":"We develop a large-scale regularity theory of higher order for divergence-form elliptic equations with heterogeneous coefficient fields a in the context of stochastic homogenization. The large-scale regularity of a-harmonic functions is encoded by Liouville principles: The space of a-harmonic functions that grow at most like a polynomial of degree k has the same dimension as in the constant-coefficient case. This result can be seen as the qualitative side of a large-scale Ck,α-regularity theory, which in the present work is developed in the form of a corresponding Ck,α-“excess decay” estimate: For a given a-harmonic function u on a ball BR, its energy distance on some ball Br to the above space of a-harmonic functions that grow at most like a polynomial of degree k has the natural decay in the radius r above some minimal radius r0. Though motivated by stochastic homogenization, the contribution of this paper is of purely deterministic nature: We work under the assumption that for the given realization a of the coefficient field, the couple (φ, σ) of scalar and vector potentials of the harmonic coordinates, where φ is the usual corrector, grows sublinearly in a mildly quantified way. We then construct “kth-order correctors” and thereby the space of a-harmonic functions that grow at most like a polynomial of degree k, establish the above excess decay, and then the corresponding Liouville principle."}],"year":"2016","author":[{"orcid":"0000-0002-0479-558X","last_name":"Fischer","id":"2C12A0B0-F248-11E8-B48F-1D18A9856A87","full_name":"Julian Fischer","first_name":"Julian L"},{"last_name":"Otto","full_name":"Otto, Felix","first_name":"Felix"}],"day":"02","quality_controlled":0,"month":"07","publication_status":"published","publist_id":"5953","publication":"Communications in Partial Differential Equations","title":"A higher-order large scale regularity theory for random elliptic operators","volume":41,"status":"public","doi":"10.1080/03605302.2016.1179318","_id":"1318","date_published":"2016-07-02T00:00:00Z","oa":1},{"day":"07","month":"05","quality_controlled":"1","publication_status":"published","publist_id":"5951","title":"DefSense: computational design of customized deformable input devices","status":"public","language":[{"iso":"eng"}],"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","acknowledgement":"We  thank  Damian  Karrer,   Rocco  Ghielmini  and  Jemin\r\nHwangbo for their help in our initial explorations. We would\r\nlike to thank Christian Schumacher for creating the video and\r\nC\r\n ́\r\necile Edwards-Rietmann for providing the voiceover. Mau-\r\nrizio Nitti helped us in designing our 3D characters. We thank\r\nChiara Daraio for insightful discussions on material proper-\r\nties and 3D printing.   We also thank the CHI reviewers for\r\ntheir feedback and guidance. Fabrizio Pece was supported by\r\nan ETH/Marie Curie fellowship (FEL-3314-1).","_id":"1319","date_published":"2016-05-07T00:00:00Z","conference":{"name":"CHI: Conference on Human Factors in Computing Systems","location":"San Jose, California, USA","end_date":"2016-05-12","start_date":"2016-05-07"},"doi":"10.1145/2858036.2858354","date_created":"2018-12-11T11:51:21Z","external_id":{"isi":["000380532903074"]},"scopus_import":"1","citation":{"ista":"Bächer M, Hepp B, Pece F, Kry P, Bickel B, Thomaszewski B, Hilliges O. 2016. DefSense: computational design of customized deformable input devices. CHI: Conference on Human Factors in Computing Systems, 3806–3816.","mla":"Bächer, Moritz, et al. <i>DefSense: Computational Design of Customized Deformable Input Devices</i>. ACM, 2016, pp. 3806–16, doi:<a href=\"https://doi.org/10.1145/2858036.2858354\">10.1145/2858036.2858354</a>.","chicago":"Bächer, Moritz, Benjamin Hepp, Fabrizio Pece, Paul Kry, Bernd Bickel, Bernhard Thomaszewski, and Otmar Hilliges. “DefSense: Computational Design of Customized Deformable Input Devices,” 3806–16. ACM, 2016. <a href=\"https://doi.org/10.1145/2858036.2858354\">https://doi.org/10.1145/2858036.2858354</a>.","ieee":"M. Bächer <i>et al.</i>, “DefSense: computational design of customized deformable input devices,” presented at the CHI: Conference on Human Factors in Computing Systems, San Jose, California, USA, 2016, pp. 3806–3816.","apa":"Bächer, M., Hepp, B., Pece, F., Kry, P., Bickel, B., Thomaszewski, B., &#38; Hilliges, O. (2016). DefSense: computational design of customized deformable input devices (pp. 3806–3816). Presented at the CHI: Conference on Human Factors in Computing Systems, San Jose, California, USA: ACM. <a href=\"https://doi.org/10.1145/2858036.2858354\">https://doi.org/10.1145/2858036.2858354</a>","short":"M. Bächer, B. Hepp, F. Pece, P. Kry, B. Bickel, B. Thomaszewski, O. Hilliges, in:, ACM, 2016, pp. 3806–3816.","ama":"Bächer M, Hepp B, Pece F, et al. DefSense: computational design of customized deformable input devices. In: ACM; 2016:3806-3816. doi:<a href=\"https://doi.org/10.1145/2858036.2858354\">10.1145/2858036.2858354</a>"},"page":"3806 - 3816","oa_version":"None","isi":1,"publisher":"ACM","article_processing_charge":"No","author":[{"full_name":"Bächer, Moritz","first_name":"Moritz","last_name":"Bächer"},{"first_name":"Benjamin","full_name":"Hepp, Benjamin","last_name":"Hepp"},{"first_name":"Fabrizio","full_name":"Pece, Fabrizio","last_name":"Pece"},{"full_name":"Kry, Paul","first_name":"Paul","last_name":"Kry"},{"last_name":"Bickel","orcid":"0000-0001-6511-9385","full_name":"Bickel, Bernd","first_name":"Bernd","id":"49876194-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Thomaszewski","first_name":"Bernhard","full_name":"Thomaszewski, Bernhard"},{"first_name":"Otmar","full_name":"Hilliges, Otmar","last_name":"Hilliges"}],"year":"2016","date_updated":"2025-09-22T08:28:21Z","abstract":[{"lang":"eng","text":"We present a novel optimization-based algorithm for the design and fabrication of customized, deformable input devices, capable of continuously sensing their deformation. We propose to embed piezoresistive sensing elements into flexible 3D printed objects. These sensing elements are then utilized to recover rich and natural user interactions at runtime. Designing such objects is a challenging and hard problem if attempted manually for all but the simplest geometries and deformations. Our method simultaneously optimizes the internal routing of the sensing elements and computes a mapping from low-level sensor readings to user-specified outputs in order to minimize reconstruction error. We demonstrate the power and flexibility of the approach by designing and fabricating a set of flexible input devices. Our results indicate that the optimization-based design greatly outperforms manual routings in terms of reconstruction accuracy and thus interaction fidelity."}],"department":[{"_id":"BeBi"}],"type":"conference"},{"article_number":"7526722","publication_status":"published","day":"28","doi":"10.1109/ACC.2016.7526722","oa":1,"date_published":"2016-07-28T00:00:00Z","conference":{"start_date":"2016-07-06","end_date":"2016-07-08","location":"Boston, MA, USA","name":"ACC: American Control Conference"},"project":[{"call_identifier":"FP7","name":"International IST Postdoc Fellowship Programme","grant_number":"291734","_id":"25681D80-B435-11E9-9278-68D0E5697425"}],"file_date_updated":"2025-06-25T11:46:36Z","file":[{"file_id":"5203","access_level":"open_access","date_updated":"2025-06-25T11:46:36Z","creator":"system","date_created":"2018-12-12T10:16:17Z","file_size":539166,"content_type":"application/pdf","file_name":"IST-2017-810-v1+1_root.pdf","relation":"main_file","checksum":"7219432b43defc62a0d45f48d4ce6a19"}],"language":[{"iso":"eng"}],"OA_place":"repository","pubrep_id":"810","date_created":"2018-12-11T11:51:21Z","publisher":"IEEE","department":[{"_id":"CaGu"},{"_id":"GaTk"}],"type":"conference","citation":{"apa":"Lang, M., &#38; Sontag, E. (2016). Scale-invariant systems realize nonlinear differential operators (Vol. 2016–July). Presented at the ACC: American Control Conference, Boston, MA, USA: IEEE. <a href=\"https://doi.org/10.1109/ACC.2016.7526722\">https://doi.org/10.1109/ACC.2016.7526722</a>","short":"M. Lang, E. Sontag, in:, IEEE, 2016.","ama":"Lang M, Sontag E. Scale-invariant systems realize nonlinear differential operators. In: Vol 2016-July. IEEE; 2016. doi:<a href=\"https://doi.org/10.1109/ACC.2016.7526722\">10.1109/ACC.2016.7526722</a>","mla":"Lang, Moritz, and Eduardo Sontag. <i>Scale-Invariant Systems Realize Nonlinear Differential Operators</i>. Vol. 2016–July, 7526722, IEEE, 2016, doi:<a href=\"https://doi.org/10.1109/ACC.2016.7526722\">10.1109/ACC.2016.7526722</a>.","ista":"Lang M, Sontag E. 2016. Scale-invariant systems realize nonlinear differential operators. ACC: American Control Conference vol. 2016–July, 7526722.","chicago":"Lang, Moritz, and Eduardo Sontag. “Scale-Invariant Systems Realize Nonlinear Differential Operators,” Vol. 2016–July. IEEE, 2016. <a href=\"https://doi.org/10.1109/ACC.2016.7526722\">https://doi.org/10.1109/ACC.2016.7526722</a>.","ieee":"M. Lang and E. Sontag, “Scale-invariant systems realize nonlinear differential operators,” presented at the ACC: American Control Conference, Boston, MA, USA, 2016, vol. 2016–July."},"quality_controlled":"1","ddc":["003","621"],"month":"07","publist_id":"5950","OA_type":"green","acknowledgement":"The research leading to these results has received funding from the People Programme (Marie Curie Actions) of the European Union's Seventh Framework Programme (FP7/2007-2013) under REA grant agreement n° [291734]. Work supported in part by grants AFOSR FA9550-14-1-0060 and NIH 1R01GM100473.","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"1320","title":"Scale-invariant systems realize nonlinear differential operators","volume":"2016-July","status":"public","scopus_import":"1","oa_version":"Submitted Version","has_accepted_license":"1","abstract":[{"lang":"eng","text":"In recent years, several biomolecular systems have been shown to be scale-invariant (SI), i.e. to show the same output dynamics when exposed to geometrically scaled input signals (u → pu, p &gt; 0) after pre-adaptation to accordingly scaled constant inputs. In this article, we show that SI systems-as well as systems invariant with respect to other input transformations-can realize nonlinear differential operators: when excited by inputs obeying functional forms characteristic for a given class of invariant systems, the systems' outputs converge to constant values directly quantifying the speed of the input."}],"ec_funded":1,"date_updated":"2025-06-25T11:46:37Z","year":"2016","article_processing_charge":"No","author":[{"id":"29E0800A-F248-11E8-B48F-1D18A9856A87","full_name":"Lang, Moritz","first_name":"Moritz","last_name":"Lang"},{"last_name":"Sontag","full_name":"Sontag, Eduardo","first_name":"Eduardo"}]},{"year":"2016","article_processing_charge":"No","author":[{"first_name":"Christian","full_name":"Hilbe, Christian","id":"2FDF8F3C-F248-11E8-B48F-1D18A9856A87","last_name":"Hilbe","orcid":"0000-0001-5116-955X"},{"full_name":"Hagel, Kristin","first_name":"Kristin","last_name":"Hagel"},{"full_name":"Milinski, Manfred","first_name":"Manfred","last_name":"Milinski"}],"abstract":[{"text":"Direct reciprocity is a major mechanism for the evolution of cooperation. Several classical studies have suggested that humans should quickly learn to adopt reciprocal strategies to establish mutual cooperation in repeated interactions. On the other hand, the recently discovered theory of ZD strategies has found that subjects who use extortionate strategies are able to exploit and subdue cooperators. Although such extortioners have been predicted to succeed in any population of adaptive opponents, theoretical follow-up studies questioned whether extortion can evolve in reality. However, most of these studies presumed that individuals have similar strategic possibilities and comparable outside options, whereas asymmetries are ubiquitous in real world applications. Here we show with a model and an economic experiment that extortionate strategies readily emerge once subjects differ in their strategic power. Our experiment combines a repeated social dilemma with asymmetric partner choice. In our main treatment there is one randomly chosen group member who is unilaterally allowed to exchange one of the other group members after every ten rounds of the social dilemma. We find that this asymmetric replacement opportunity generally promotes cooperation, but often the resulting payoff distribution reflects the underlying power structure. Almost half of the subjects in a better strategic position turn into extortioners, who quickly proceed to exploit their peers. By adapting their cooperation probabilities consistent with ZD theory, extortioners force their co-players to cooperate without being similarly cooperative themselves. Comparison to non-extortionate players under the same conditions indicates a substantial net gain to extortion. Our results thus highlight how power asymmetries can endanger mutually beneficial interactions, and transform them into exploitative relationships. In particular, our results indicate that the extortionate strategies predicted from ZD theory could play a more prominent role in our daily interactions than previously thought.","lang":"eng"}],"date_updated":"2025-09-22T08:27:01Z","oa_version":"Published Version","has_accepted_license":"1","related_material":{"record":[{"status":"public","relation":"research_data","id":"9867"},{"relation":"research_data","id":"9868","status":"public"}]},"corr_author":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)"},"issue":"10","scopus_import":"1","external_id":{"isi":["000385696900024"]},"_id":"1322","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","acknowledgement":"CH was funded by the Schrödinger program of the Austrian Science Fund (FWF) J3475. ","status":"public","volume":11,"title":"Asymmetric power boosts extortion in an economic experiment","publist_id":"5948","ddc":["004","006"],"month":"10","quality_controlled":"1","department":[{"_id":"KrCh"}],"type":"journal_article","intvolume":"        11","isi":1,"publisher":"Public Library of Science","citation":{"ieee":"C. Hilbe, K. Hagel, and M. Milinski, “Asymmetric power boosts extortion in an economic experiment,” <i>PLoS One</i>, vol. 11, no. 10. Public Library of Science, 2016.","chicago":"Hilbe, Christian, Kristin Hagel, and Manfred Milinski. “Asymmetric Power Boosts Extortion in an Economic Experiment.” <i>PLoS One</i>. Public Library of Science, 2016. <a href=\"https://doi.org/10.1371/journal.pone.0163867\">https://doi.org/10.1371/journal.pone.0163867</a>.","ista":"Hilbe C, Hagel K, Milinski M. 2016. Asymmetric power boosts extortion in an economic experiment. PLoS One. 11(10), e0163867.","mla":"Hilbe, Christian, et al. “Asymmetric Power Boosts Extortion in an Economic Experiment.” <i>PLoS One</i>, vol. 11, no. 10, e0163867, Public Library of Science, 2016, doi:<a href=\"https://doi.org/10.1371/journal.pone.0163867\">10.1371/journal.pone.0163867</a>.","ama":"Hilbe C, Hagel K, Milinski M. Asymmetric power boosts extortion in an economic experiment. <i>PLoS One</i>. 2016;11(10). doi:<a href=\"https://doi.org/10.1371/journal.pone.0163867\">10.1371/journal.pone.0163867</a>","short":"C. Hilbe, K. Hagel, M. Milinski, PLoS One 11 (2016).","apa":"Hilbe, C., Hagel, K., &#38; Milinski, M. (2016). Asymmetric power boosts extortion in an economic experiment. <i>PLoS One</i>. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pone.0163867\">https://doi.org/10.1371/journal.pone.0163867</a>"},"date_created":"2018-12-11T11:51:22Z","pubrep_id":"716","date_published":"2016-10-04T00:00:00Z","oa":1,"doi":"10.1371/journal.pone.0163867","language":[{"iso":"eng"}],"file":[{"checksum":"6b33e394003dfe8b4ca6be1858aaa8e3","relation":"main_file","file_name":"IST-2016-716-v1+1_journal.pone.0163867.PDF","content_type":"application/pdf","file_size":2077905,"date_created":"2018-12-12T10:08:08Z","creator":"system","date_updated":"2020-07-14T12:44:44Z","access_level":"open_access","file_id":"4668"}],"file_date_updated":"2020-07-14T12:44:44Z","publication":"PLoS One","publication_status":"published","article_number":"e0163867","day":"04"},{"doi":"10.7554/eLife.17977","oa":1,"date_published":"2016-10-25T00:00:00Z","file_date_updated":"2020-07-14T12:44:44Z","project":[{"call_identifier":"FP7","_id":"25C0F108-B435-11E9-9278-68D0E5697425","grant_number":"268548","name":"Nanophysiology of fast-spiking, parvalbumin-expressing GABAergic interneurons"},{"name":"Biophysics and circuit function of a giant cortical glutamatergic synapse","grant_number":"692692","_id":"25B7EB9E-B435-11E9-9278-68D0E5697425","call_identifier":"H2020"}],"publication":"eLife","file":[{"access_level":"open_access","date_updated":"2020-07-14T12:44:44Z","creator":"system","file_id":"5257","file_name":"IST-2016-715-v1+1_e17977-download.pdf","relation":"main_file","checksum":"a7201280c571bed88ebd459ce5ce6a47","content_type":"application/pdf","date_created":"2018-12-12T10:17:05Z","file_size":1477891}],"language":[{"iso":"eng"}],"article_number":"e17977","publication_status":"published","day":"25","publisher":"eLife Sciences Publications","isi":1,"intvolume":"         5","department":[{"_id":"PeJo"}],"type":"journal_article","citation":{"apa":"Vyleta, N., Borges Merjane, C., &#38; Jonas, P. M. (2016). Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses. <i>ELife</i>. eLife Sciences Publications. <a href=\"https://doi.org/10.7554/eLife.17977\">https://doi.org/10.7554/eLife.17977</a>","short":"N. Vyleta, C. Borges Merjane, P.M. Jonas, ELife 5 (2016).","ama":"Vyleta N, Borges Merjane C, Jonas PM. Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses. <i>eLife</i>. 2016;5. doi:<a href=\"https://doi.org/10.7554/eLife.17977\">10.7554/eLife.17977</a>","ista":"Vyleta N, Borges Merjane C, Jonas PM. 2016. Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses. eLife. 5, e17977.","mla":"Vyleta, Nicholas, et al. “Plasticity-Dependent, Full Detonation at Hippocampal Mossy Fiber–CA3 Pyramidal Neuron Synapses.” <i>ELife</i>, vol. 5, e17977, eLife Sciences Publications, 2016, doi:<a href=\"https://doi.org/10.7554/eLife.17977\">10.7554/eLife.17977</a>.","ieee":"N. Vyleta, C. Borges Merjane, and P. M. Jonas, “Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses,” <i>eLife</i>, vol. 5. eLife Sciences Publications, 2016.","chicago":"Vyleta, Nicholas, Carolina Borges Merjane, and Peter M Jonas. “Plasticity-Dependent, Full Detonation at Hippocampal Mossy Fiber–CA3 Pyramidal Neuron Synapses.” <i>ELife</i>. eLife Sciences Publications, 2016. <a href=\"https://doi.org/10.7554/eLife.17977\">https://doi.org/10.7554/eLife.17977</a>."},"acknowledged_ssus":[{"_id":"M-Shop"},{"_id":"PreCl"}],"pubrep_id":"715","date_created":"2018-12-11T11:51:22Z","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","_id":"1323","title":"Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses","volume":5,"status":"public","quality_controlled":"1","ddc":["571","572"],"month":"10","publist_id":"5947","oa_version":"Published Version","has_accepted_license":"1","ec_funded":1,"abstract":[{"text":"Mossy fiber synapses on CA3 pyramidal cells are 'conditional detonators' that reliably discharge postsynaptic targets. The 'conditional' nature implies that burst activity in dentate gyrus granule cells is required for detonation. Whether single unitary excitatory postsynaptic potentials (EPSPs) trigger spikes in CA3 neurons remains unknown. Mossy fiber synapses exhibit both pronounced short-term facilitation and uniquely large post-tetanic potentiation (PTP). We tested whether PTP could convert mossy fiber synapses from subdetonator into detonator mode, using a recently developed method to selectively and noninvasively stimulate individual presynaptic terminals in rat brain slices. Unitary EPSPs failed to initiate a spike in CA3 neurons under control conditions, but reliably discharged them after induction of presynaptic short-term plasticity. Remarkably, PTP switched mossy fiber synapses into full detonators for tens of seconds. Plasticity-dependent detonation may be critical for efficient coding, storage, and recall of information in the granule cell–CA3 cell network.","lang":"eng"}],"date_updated":"2025-09-22T08:26:29Z","author":[{"full_name":"Vyleta, Nicholas","first_name":"Nicholas","id":"36C4978E-F248-11E8-B48F-1D18A9856A87","last_name":"Vyleta"},{"orcid":"0000-0003-0005-401X","last_name":"Borges Merjane","id":"4305C450-F248-11E8-B48F-1D18A9856A87","first_name":"Carolina","full_name":"Borges Merjane, Carolina"},{"first_name":"Peter M","full_name":"Jonas, Peter M","id":"353C1B58-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5001-4804","last_name":"Jonas"}],"article_processing_charge":"No","year":"2016","scopus_import":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)"},"corr_author":"1","external_id":{"isi":["000387034600001"]}},{"date_created":"2018-12-11T11:51:22Z","intvolume":"      2016","publisher":"AAAI Press","type":"conference","department":[{"_id":"KrCh"}],"citation":{"apa":"Chatterjee, K., &#38; Chmelik, M. (2016). Indefinite-horizon reachability in Goal-DEC-POMDPs. In <i>Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling</i> (Vol. 2016, pp. 88–96). London, United Kingdom: AAAI Press. <a href=\"https://doi.org/10.1609/icaps.v26i1.13737\">https://doi.org/10.1609/icaps.v26i1.13737</a>","short":"K. Chatterjee, M. Chmelik, in:, Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling, AAAI Press, 2016, pp. 88–96.","ama":"Chatterjee K, Chmelik M. Indefinite-horizon reachability in Goal-DEC-POMDPs. In: <i>Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling</i>. Vol 2016. AAAI Press; 2016:88-96. doi:<a href=\"https://doi.org/10.1609/icaps.v26i1.13737\">10.1609/icaps.v26i1.13737</a>","mla":"Chatterjee, Krishnendu, and Martin Chmelik. “Indefinite-Horizon Reachability in Goal-DEC-POMDPs.” <i>Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling</i>, vol. 2016, AAAI Press, 2016, pp. 88–96, doi:<a href=\"https://doi.org/10.1609/icaps.v26i1.13737\">10.1609/icaps.v26i1.13737</a>.","ista":"Chatterjee K, Chmelik M. 2016. Indefinite-horizon reachability in Goal-DEC-POMDPs. Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling. ICAPS: International Conference on Automated Planning and Scheduling vol. 2016, 88–96.","ieee":"K. Chatterjee and M. Chmelik, “Indefinite-horizon reachability in Goal-DEC-POMDPs,” in <i>Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling</i>, London, United Kingdom, 2016, vol. 2016, pp. 88–96.","chicago":"Chatterjee, Krishnendu, and Martin Chmelik. “Indefinite-Horizon Reachability in Goal-DEC-POMDPs.” In <i>Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling</i>, 2016:88–96. AAAI Press, 2016. <a href=\"https://doi.org/10.1609/icaps.v26i1.13737\">https://doi.org/10.1609/icaps.v26i1.13737</a>."},"publication_status":"published","day":"01","date_published":"2016-01-01T00:00:00Z","conference":{"end_date":"2016-06-17","start_date":"2016-06-12","name":"ICAPS: International Conference on Automated Planning and Scheduling","location":"London, United Kingdom"},"oa":1,"doi":"10.1609/icaps.v26i1.13737","publication":"Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling","project":[{"call_identifier":"FWF","name":"Modern Graph Algorithmic Techniques in Formal Verification","_id":"2584A770-B435-11E9-9278-68D0E5697425","grant_number":"P 23499-N23"},{"call_identifier":"FP7","name":"Quantitative Graph Games: Theory and Applications","grant_number":"279307","_id":"2581B60A-B435-11E9-9278-68D0E5697425"},{"call_identifier":"FWF","name":"Rigorous Systems Engineering","_id":"25832EC2-B435-11E9-9278-68D0E5697425","grant_number":"S 11407_N23"}],"language":[{"iso":"eng"}],"scopus_import":"1","corr_author":"1","oa_version":"None","author":[{"first_name":"Krishnendu","full_name":"Chatterjee, Krishnendu","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-4561-241X","last_name":"Chatterjee"},{"first_name":"Martin","full_name":"Chmelik, Martin","id":"3624234E-F248-11E8-B48F-1D18A9856A87","last_name":"Chmelik"}],"year":"2016","article_processing_charge":"No","abstract":[{"text":"DEC-POMDPs extend POMDPs to a multi-agent setting, where several agents operate in an uncertain environment independently to achieve a joint objective. DEC-POMDPs have been studied with finite-horizon and infinite-horizon discounted-sum objectives, and there exist solvers both for exact and approximate solutions. In this work we consider Goal-DEC-POMDPs, where given a set of target states, the objective is to ensure that the target set is reached with minimal cost. We consider the indefinite-horizon (infinite-horizon with either discounted-sum, or undiscounted-sum, where absorbing goal states have zero-cost) problem. We present a new and novel method to solve the problem that extends methods for finite-horizon DEC-POMDPs and the RTDP-Bel approach for POMDPs. We present experimental results on several examples, and show that our approach presents promising results. Copyright ","lang":"eng"}],"ec_funded":1,"date_updated":"2025-05-19T11:03:49Z","page":"88 - 96","main_file_link":[{"open_access":"1","url":"http://www.aaai.org/ocs/index.php/ICAPS/ICAPS16/paper/view/12999"}],"month":"01","quality_controlled":"1","publist_id":"5946","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"1324","volume":2016,"title":"Indefinite-horizon reachability in Goal-DEC-POMDPs","status":"public"},{"quality_controlled":"1","ddc":["004"],"month":"08","publist_id":"5944","acknowledgement":"The work has been supported by the Czech Science Foundation, grant No. 15-17564S, by EPSRC grant\r\nEP/M023656/1, and by the People Programme (Marie Curie Actions) of the European Union’s Seventh\r\nFramework Programme (FP7/2007-2013) under REA grant agreement no [291734]","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","_id":"1325","title":"Stability in graphs and games","volume":59,"status":"public","scopus_import":1,"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)"},"corr_author":"1","oa_version":"Published Version","has_accepted_license":"1","date_updated":"2024-10-09T20:57:03Z","ec_funded":1,"abstract":[{"text":"We study graphs and two-player games in which rewards are assigned to states, and the goal of the players is to satisfy or dissatisfy certain property of the generated outcome, given as a mean payoff property. Since the notion of mean-payoff does not reflect possible fluctuations from the mean-payoff along a run, we propose definitions and algorithms for capturing the stability of the system, and give algorithms for deciding if a given mean payoff and stability objective can be ensured in the system.","lang":"eng"}],"author":[{"first_name":"Tomáš","full_name":"Brázdil, Tomáš","last_name":"Brázdil"},{"last_name":"Forejt","first_name":"Vojtěch","full_name":"Forejt, Vojtěch"},{"last_name":"Kučera","full_name":"Kučera, Antonín","first_name":"Antonín"},{"last_name":"Novotny","id":"3CC3B868-F248-11E8-B48F-1D18A9856A87","first_name":"Petr","full_name":"Novotny, Petr"}],"year":"2016","alternative_title":["LIPIcs"],"article_number":"10","publication_status":"published","day":"01","doi":"10.4230/LIPIcs.CONCUR.2016.10","conference":{"end_date":"2016-08-26","start_date":"2016-08-23","name":"CONCUR: Concurrency Theory","location":"Quebec City, Canada"},"date_published":"2016-08-01T00:00:00Z","oa":1,"project":[{"call_identifier":"FP7","_id":"25681D80-B435-11E9-9278-68D0E5697425","grant_number":"291734","name":"International IST Postdoc Fellowship Programme"}],"file_date_updated":"2020-07-14T12:44:44Z","file":[{"access_level":"open_access","date_updated":"2020-07-14T12:44:44Z","creator":"system","file_id":"5229","file_name":"IST-2016-665-v1+1_Forejt_et_al__Stability_in_graphs_and_games.pdf","checksum":"3c2dc6ab0358f8aa8f7aa7d6c1293159","relation":"main_file","date_created":"2018-12-12T10:16:40Z","file_size":553648,"content_type":"application/pdf"}],"language":[{"iso":"eng"}],"pubrep_id":"665","date_created":"2018-12-11T11:51:23Z","publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","intvolume":"        59","type":"conference","department":[{"_id":"KrCh"}],"citation":{"short":"T. Brázdil, V. Forejt, A. Kučera, P. Novotný, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.","ama":"Brázdil T, Forejt V, Kučera A, Novotný P. Stability in graphs and games. In: Vol 59. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2016. doi:<a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2016.10\">10.4230/LIPIcs.CONCUR.2016.10</a>","apa":"Brázdil, T., Forejt, V., Kučera, A., &#38; Novotný, P. (2016). Stability in graphs and games (Vol. 59). Presented at the CONCUR: Concurrency Theory, Quebec City, Canada: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2016.10\">https://doi.org/10.4230/LIPIcs.CONCUR.2016.10</a>","ista":"Brázdil T, Forejt V, Kučera A, Novotný P. 2016. Stability in graphs and games. CONCUR: Concurrency Theory, LIPIcs, vol. 59, 10.","mla":"Brázdil, Tomáš, et al. <i>Stability in Graphs and Games</i>. Vol. 59, 10, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016, doi:<a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2016.10\">10.4230/LIPIcs.CONCUR.2016.10</a>.","ieee":"T. Brázdil, V. Forejt, A. Kučera, and P. Novotný, “Stability in graphs and games,” presented at the CONCUR: Concurrency Theory, Quebec City, Canada, 2016, vol. 59.","chicago":"Brázdil, Tomáš, Vojtěch Forejt, Antonín Kučera, and Petr Novotný. “Stability in Graphs and Games,” Vol. 59. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016. <a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2016.10\">https://doi.org/10.4230/LIPIcs.CONCUR.2016.10</a>."}},{"year":"2016","article_processing_charge":"No","author":[{"first_name":"Tomáš","full_name":"Brázdil, Tomáš","last_name":"Brázdil"},{"full_name":"Kučera, Antonín","first_name":"Antonín","last_name":"Kučera"},{"id":"3CC3B868-F248-11E8-B48F-1D18A9856A87","full_name":"Novotny, Petr","first_name":"Petr","last_name":"Novotny"}],"date_updated":"2025-09-22T08:25:26Z","abstract":[{"text":"Energy Markov Decision Processes (EMDPs) are finite-state Markov decision processes where each transition is assigned an integer counter update and a rational payoff. An EMDP configuration is a pair s(n), where s is a control state and n is the current counter value. The configurations are changed by performing transitions in the standard way. We consider the problem of computing a safe strategy (i.e., a strategy that keeps the counter non-negative) which maximizes the expected mean payoff. ","lang":"eng"}],"ec_funded":1,"oa_version":"Preprint","arxiv":1,"page":"32 - 49","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1607.00678"}],"corr_author":"1","scopus_import":"1","external_id":{"isi":["000389808100003"],"arxiv":["1607.00678"]},"_id":"1326","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","acknowledgement":"The research was funded by the Czech Science Foundation Grant No. P202/12/G061 and by the People Programme (Marie Curie Actions) of the European Union’s Seventh Framework Programme (FP7/2007-2013) under REA grant agreement no [291734].","status":"public","volume":9938,"title":"Optimizing the expected mean payoff in Energy Markov Decision Processes","publist_id":"5943","month":"09","quality_controlled":"1","type":"conference","department":[{"_id":"KrCh"}],"isi":1,"intvolume":"      9938","publisher":"Springer","citation":{"chicago":"Brázdil, Tomáš, Antonín Kučera, and Petr Novotný. “Optimizing the Expected Mean Payoff in Energy Markov Decision Processes,” 9938:32–49. Springer, 2016. <a href=\"https://doi.org/10.1007/978-3-319-46520-3_3\">https://doi.org/10.1007/978-3-319-46520-3_3</a>.","ieee":"T. Brázdil, A. Kučera, and P. Novotný, “Optimizing the expected mean payoff in Energy Markov Decision Processes,” presented at the ATVA: Automated Technology for Verification and Analysis, Chiba, Japan, 2016, vol. 9938, pp. 32–49.","ista":"Brázdil T, Kučera A, Novotný P. 2016. Optimizing the expected mean payoff in Energy Markov Decision Processes. ATVA: Automated Technology for Verification and Analysis, LNCS, vol. 9938, 32–49.","mla":"Brázdil, Tomáš, et al. <i>Optimizing the Expected Mean Payoff in Energy Markov Decision Processes</i>. Vol. 9938, Springer, 2016, pp. 32–49, doi:<a href=\"https://doi.org/10.1007/978-3-319-46520-3_3\">10.1007/978-3-319-46520-3_3</a>.","ama":"Brázdil T, Kučera A, Novotný P. Optimizing the expected mean payoff in Energy Markov Decision Processes. In: Vol 9938. Springer; 2016:32-49. doi:<a href=\"https://doi.org/10.1007/978-3-319-46520-3_3\">10.1007/978-3-319-46520-3_3</a>","short":"T. Brázdil, A. Kučera, P. Novotný, in:, Springer, 2016, pp. 32–49.","apa":"Brázdil, T., Kučera, A., &#38; Novotný, P. (2016). Optimizing the expected mean payoff in Energy Markov Decision Processes (Vol. 9938, pp. 32–49). Presented at the ATVA: Automated Technology for Verification and Analysis, Chiba, Japan: Springer. <a href=\"https://doi.org/10.1007/978-3-319-46520-3_3\">https://doi.org/10.1007/978-3-319-46520-3_3</a>"},"date_created":"2018-12-11T11:51:23Z","conference":{"location":"Chiba, Japan","name":"ATVA: Automated Technology for Verification and Analysis","start_date":"2016-10-17","end_date":"2016-10-20"},"date_published":"2016-09-22T00:00:00Z","oa":1,"doi":"10.1007/978-3-319-46520-3_3","language":[{"iso":"eng"}],"project":[{"call_identifier":"FP7","_id":"25681D80-B435-11E9-9278-68D0E5697425","grant_number":"291734","name":"International IST Postdoc Fellowship Programme"}],"publication_status":"published","alternative_title":["LNCS"],"day":"22"},{"date_created":"2018-12-11T11:51:23Z","citation":{"apa":"Brázdil, T., Chatterjee, K., Chmelik, M., Gupta, A., &#38; Novotný, P. (2016). Stochastic shortest path with energy constraints in POMDPs. In <i>Proceedings of the 15th International Conference on Autonomous Agents and Multiagent Systems</i> (pp. 1465–1466). Singapore: ACM.","ama":"Brázdil T, Chatterjee K, Chmelik M, Gupta A, Novotný P. Stochastic shortest path with energy constraints in POMDPs. In: <i>Proceedings of the 15th International Conference on Autonomous Agents and Multiagent Systems</i>. ACM; 2016:1465-1466.","short":"T. Brázdil, K. Chatterjee, M. Chmelik, A. Gupta, P. Novotný, in:, Proceedings of the 15th International Conference on Autonomous Agents and Multiagent Systems, ACM, 2016, pp. 1465–1466.","chicago":"Brázdil, Tomáš, Krishnendu Chatterjee, Martin Chmelik, Anchit Gupta, and Petr Novotný. “Stochastic Shortest Path with Energy Constraints in POMDPs.” In <i>Proceedings of the 15th International Conference on Autonomous Agents and Multiagent Systems</i>, 1465–66. ACM, 2016.","ieee":"T. Brázdil, K. Chatterjee, M. Chmelik, A. Gupta, and P. Novotný, “Stochastic shortest path with energy constraints in POMDPs,” in <i>Proceedings of the 15th International Conference on Autonomous Agents and Multiagent Systems</i>, Singapore, 2016, pp. 1465–1466.","mla":"Brázdil, Tomáš, et al. “Stochastic Shortest Path with Energy Constraints in POMDPs.” <i>Proceedings of the 15th International Conference on Autonomous Agents and Multiagent Systems</i>, ACM, 2016, pp. 1465–66.","ista":"Brázdil T, Chatterjee K, Chmelik M, Gupta A, Novotný P. 2016. Stochastic shortest path with energy constraints in POMDPs. Proceedings of the 15th International Conference on Autonomous Agents and Multiagent Systems. AAMAS: Autonomous Agents &#38; Multiagent Systems, 1465–1466."},"department":[{"_id":"KrCh"}],"type":"conference","publisher":"ACM","day":"01","publication_status":"published","language":[{"iso":"eng"}],"publication":"Proceedings of the 15th International Conference on Autonomous Agents and Multiagent Systems","project":[{"name":"Modern Graph Algorithmic Techniques in Formal Verification","_id":"2584A770-B435-11E9-9278-68D0E5697425","grant_number":"P 23499-N23","call_identifier":"FWF"},{"call_identifier":"FWF","grant_number":"S 11407_N23","_id":"25832EC2-B435-11E9-9278-68D0E5697425","name":"Rigorous Systems Engineering"},{"call_identifier":"FP7","grant_number":"291734","_id":"25681D80-B435-11E9-9278-68D0E5697425","name":"International IST Postdoc Fellowship Programme"},{"_id":"2581B60A-B435-11E9-9278-68D0E5697425","grant_number":"279307","name":"Quantitative Graph Games: Theory and Applications","call_identifier":"FP7"}],"oa":1,"date_published":"2016-01-01T00:00:00Z","conference":{"name":"AAMAS: Autonomous Agents & Multiagent Systems","location":"Singapore","end_date":"2016-05-13","start_date":"2016-05-09"},"external_id":{"arxiv":["1602.07565"]},"scopus_import":"1","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1602.07565"}],"page":"1465 - 1466","date_updated":"2025-06-04T10:26:23Z","ec_funded":1,"abstract":[{"lang":"eng","text":"We consider partially observable Markov decision processes (POMDPs) with a set of target states and positive integer costs associated with every transition. The traditional optimization objective (stochastic shortest path) asks to minimize the expected total cost until the target set is reached. We extend the traditional framework of POMDPs to model energy consumption, which represents a hard constraint. The energy levels may increase and decrease with transitions, and the hard constraint requires that the energy level must remain positive in all steps till the target is reached. First, we present a novel algorithm for solving POMDPs with energy levels, developing on existing POMDP solvers and using RTDP as its main method. Our second contribution is related to policy representation. For larger POMDP instances the policies computed by existing solvers are too large to be understandable. We present an automated procedure based on machine learning techniques that automatically extracts important decisions of the policy allowing us to compute succinct human readable policies. Finally, we show experimentally that our algorithm performs well and computes succinct policies on a number of POMDP instances from the literature that were naturally enhanced with energy levels. "}],"author":[{"last_name":"Brázdil","first_name":"Tomáš","full_name":"Brázdil, Tomáš"},{"id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","full_name":"Chatterjee, Krishnendu","first_name":"Krishnendu","orcid":"0000-0002-4561-241X","last_name":"Chatterjee"},{"full_name":"Chmelik, Martin","first_name":"Martin","id":"3624234E-F248-11E8-B48F-1D18A9856A87","last_name":"Chmelik"},{"first_name":"Anchit","full_name":"Gupta, Anchit","last_name":"Gupta"},{"id":"3CC3B868-F248-11E8-B48F-1D18A9856A87","first_name":"Petr","full_name":"Novotny, Petr","last_name":"Novotny"}],"year":"2016","article_processing_charge":"No","oa_version":"Preprint","arxiv":1,"publist_id":"5942","quality_controlled":"1","month":"01","status":"public","title":"Stochastic shortest path with energy constraints in POMDPs","_id":"1327","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"},{"type":"journal_article","department":[{"_id":"GeKa"}],"publisher":"American Chemical Society","isi":1,"intvolume":"        16","citation":{"ista":"Watzinger H, Kloeffel C, Vukušić L, Rossell M, Sessi V, Kukucka J, Kirchschlager R, Lausecker E, Truhlar A, Glaser M, Rastelli A, Fuhrer A, Loss D, Katsaros G. 2016. Heavy-hole states in germanium hut wires. Nano Letters. 16(11), 6879–6885.","mla":"Watzinger, Hannes, et al. “Heavy-Hole States in Germanium Hut Wires.” <i>Nano Letters</i>, vol. 16, no. 11, American Chemical Society, 2016, pp. 6879–85, doi:<a href=\"https://doi.org/10.1021/acs.nanolett.6b02715\">10.1021/acs.nanolett.6b02715</a>.","ieee":"H. Watzinger <i>et al.</i>, “Heavy-hole states in germanium hut wires,” <i>Nano Letters</i>, vol. 16, no. 11. American Chemical Society, pp. 6879–6885, 2016.","chicago":"Watzinger, Hannes, Christoph Kloeffel, Lada Vukušić, Marta Rossell, Violetta Sessi, Josip Kukucka, Raimund Kirchschlager, et al. “Heavy-Hole States in Germanium Hut Wires.” <i>Nano Letters</i>. American Chemical Society, 2016. <a href=\"https://doi.org/10.1021/acs.nanolett.6b02715\">https://doi.org/10.1021/acs.nanolett.6b02715</a>.","short":"H. Watzinger, C. Kloeffel, L. Vukušić, M. Rossell, V. Sessi, J. Kukucka, R. Kirchschlager, E. Lausecker, A. Truhlar, M. Glaser, A. Rastelli, A. Fuhrer, D. Loss, G. Katsaros, Nano Letters 16 (2016) 6879–6885.","ama":"Watzinger H, Kloeffel C, Vukušić L, et al. Heavy-hole states in germanium hut wires. <i>Nano Letters</i>. 2016;16(11):6879-6885. doi:<a href=\"https://doi.org/10.1021/acs.nanolett.6b02715\">10.1021/acs.nanolett.6b02715</a>","apa":"Watzinger, H., Kloeffel, C., Vukušić, L., Rossell, M., Sessi, V., Kukucka, J., … Katsaros, G. (2016). Heavy-hole states in germanium hut wires. <i>Nano Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acs.nanolett.6b02715\">https://doi.org/10.1021/acs.nanolett.6b02715</a>"},"date_created":"2018-12-11T11:51:24Z","pubrep_id":"664","doi":"10.1021/acs.nanolett.6b02715","oa":1,"date_published":"2016-09-22T00:00:00Z","file":[{"content_type":"application/pdf","date_created":"2018-12-12T10:14:04Z","file_size":535121,"file_name":"IST-2016-664-v1+1_acs.nanolett.6b02715.pdf","relation":"main_file","checksum":"b63feece90d7b620ece49ca632e34ff3","file_id":"5053","access_level":"open_access","date_updated":"2020-07-14T12:44:44Z","creator":"system"}],"language":[{"iso":"eng"}],"publication":"Nano Letters","file_date_updated":"2020-07-14T12:44:44Z","project":[{"call_identifier":"FP7","grant_number":"335497","_id":"25517E86-B435-11E9-9278-68D0E5697425","name":"Towards Spin qubits and Majorana fermions in Germanium self assembled hut-wires"}],"publication_status":"published","day":"22","abstract":[{"text":"Hole spins have gained considerable interest in the past few years due to their potential for fast electrically controlled qubits. Here, we study holes confined in Ge hut wires, a so-far unexplored type of nanostructure. Low-temperature magnetotransport measurements reveal a large anisotropy between the in-plane and out-of-plane g-factors of up to 18. Numerical simulations verify that this large anisotropy originates from a confined wave function of heavy-hole character. A light-hole admixture of less than 1% is estimated for the states of lowest energy, leading to a surprisingly large reduction of the out-of-plane g-factors compared with those for pure heavy holes. Given this tiny light-hole contribution, the spin lifetimes are expected to be very long, even in isotopically nonpurified samples.","lang":"eng"}],"ec_funded":1,"date_updated":"2025-09-22T08:24:38Z","year":"2016","author":[{"last_name":"Watzinger","id":"35DF8E50-F248-11E8-B48F-1D18A9856A87","first_name":"Hannes","full_name":"Watzinger, Hannes"},{"last_name":"Kloeffel","first_name":"Christoph","full_name":"Kloeffel, Christoph"},{"orcid":"0000-0003-2424-8636","last_name":"Vukusic","first_name":"Lada","full_name":"Vukusic, Lada","id":"31E9F056-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Rossell, Marta","first_name":"Marta","last_name":"Rossell"},{"last_name":"Sessi","full_name":"Sessi, Violetta","first_name":"Violetta"},{"first_name":"Josip","full_name":"Kukucka, Josip","id":"3F5D8856-F248-11E8-B48F-1D18A9856A87","last_name":"Kukucka"},{"last_name":"Kirchschlager","full_name":"Kirchschlager, Raimund","first_name":"Raimund"},{"last_name":"Lausecker","id":"33662F76-F248-11E8-B48F-1D18A9856A87","first_name":"Elisabeth","full_name":"Lausecker, Elisabeth"},{"full_name":"Truhlar, Alisha","first_name":"Alisha","id":"49CBC780-F248-11E8-B48F-1D18A9856A87","last_name":"Truhlar"},{"last_name":"Glaser","first_name":"Martin","full_name":"Glaser, Martin"},{"last_name":"Rastelli","first_name":"Armando","full_name":"Rastelli, Armando"},{"first_name":"Andreas","full_name":"Fuhrer, Andreas","last_name":"Fuhrer"},{"last_name":"Loss","first_name":"Daniel","full_name":"Loss, Daniel"},{"orcid":"0000-0001-8342-202X","last_name":"Katsaros","id":"38DB5788-F248-11E8-B48F-1D18A9856A87","full_name":"Katsaros, Georgios","first_name":"Georgios"}],"article_processing_charge":"No","oa_version":"Published Version","has_accepted_license":"1","related_material":{"record":[{"relation":"popular_science","id":"7977"},{"relation":"dissertation_contains","id":"7996","status":"public"}]},"page":"6879 - 6885","corr_author":"1","issue":"11","scopus_import":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)"},"external_id":{"isi":["000387625000025"]},"_id":"1328","acknowledgement":"The work was supported by the EC FP7 ICT project SiSPIN no. 323841, the EC FP7 ICT project PAMS no. 610446, the ERC Starting Grant no. 335497, the FWF-I-1190-N20 project, and the Swiss NSF. We acknowledge F. Schäffler for fruitful discussions related to the hut wire growth and for giving us access to the molecular beam epitaxy system, M. Schatzl for her support in electron beam lithography, and V. Jadris ̌ko for helping us with the COMSOL simulations. Finally, we thank G. Bauer for his continuous support. ","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","status":"public","title":"Heavy-hole states in germanium hut wires","volume":16,"publist_id":"5941","quality_controlled":"1","ddc":["539"],"month":"09"},{"month":"10","ddc":["576"],"quality_controlled":"1","publist_id":"5940","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","acknowledgement":"This study was financially supported by individual grants from the Volkswagen Stiftung (to M.C.), the Deutsche Forschungsgemeinschaft (grant PA 903/6 to J.P.) and the DAAD (to A.K.H.). The authors would like to thank I. Schrank, L. Theodosiou, M. Kredler, C. Laforsch, J. Wolinska, J. Griebel, R. Jaenichen, and K. Otte for providing the necessary resources and help for maintaining Daphnia cultures in the laboratory. H. Lainer supported us for the molecular laboratory work. D. Gilbert and J. K. Colbourne contributed ideas for the bioinformatics analysis, and L. Hardulak did the orthology mapping including more insect species. This study was financially supported by individual grants from the Volkswagen Stiftung (to M.C.), the Deutsche Forschungsgemeinschaft (grant PA 903/6 to J.P.) and the DAAD (to A.K.H.). This work benefits from and contributes to the Daphnia Genomics Consortium.","_id":"1329","volume":8,"title":"De novo transcriptome assembly and sex-biased gene expression in the cyclical parthenogenetic Daphnia galeata","status":"public","tmp":{"short":"CC BY-NC (4.0)","image":"/images/cc_by_nc.png","name":"Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc/4.0/legalcode"},"scopus_import":"1","issue":"10","external_id":{"isi":["000386121300005"]},"has_accepted_license":"1","oa_version":"Published Version","article_processing_charge":"No","year":"2016","author":[{"orcid":"0000-0001-8871-4961","last_name":"Huylmans","id":"4C0A3874-F248-11E8-B48F-1D18A9856A87","first_name":"Ann K","full_name":"Huylmans, Ann K"},{"full_name":"López Ezquerra, Alberto","first_name":"Alberto","last_name":"López Ezquerra"},{"full_name":"Parsch, John","first_name":"John","last_name":"Parsch"},{"full_name":"Cordellier, Mathilde","first_name":"Mathilde","last_name":"Cordellier"}],"abstract":[{"lang":"eng","text":"Daphnia species have become models for ecological genomics and exhibit interesting features, such as high phenotypic plasticity and a densely packed genome with many lineage-specific genes. They are also cyclic parthenogenetic, with alternating asexual and sexual cycles and environmental sex determination. Here, we present a de novo transcriptome assembly of over 32,000 D. galeata genes and use it to investigate gene expression in females and spontaneously produced males of two clonal lines derived from lakes in Germany and the Czech Republic. We find that only a low percentage (18%) of genes shows sex-biased expression and that there are many more female-biased gene (FBG) than male-biased gene (MBG). Furthermore, FBGs tend to be more conserved between species than MBGs in both sequence and expression. These patterns may be a consequence of cyclic parthenogenesis leading to a relaxation of purifying selection on MBGs. The two clonal lines show considerable differences in both number and identity of sex-biased genes, suggesting that they may have reproductive strategies differing in their investment in sexual reproduction. Orthologs of key genes in the sex determination and juvenile hormone pathways, which are thought to be important for the transition from asexual to sexual reproduction, are present in D. galeata and highly conserved among Daphnia species."}],"date_updated":"2025-09-22T08:24:02Z","license":"https://creativecommons.org/licenses/by-nc/4.0/","page":"3120 - 3139","publication_status":"published","day":"01","oa":1,"date_published":"2016-10-01T00:00:00Z","doi":"10.1093/gbe/evw221","file_date_updated":"2020-07-14T12:44:44Z","publication":"Genome Biology and Evolution","language":[{"iso":"eng"}],"file":[{"content_type":"application/pdf","date_created":"2018-12-12T10:12:06Z","file_size":1406265,"file_name":"IST-2016-663-v1+1_Genome_Biol_Evol-2016-Huylmans-3120-39.pdf","checksum":"25c7adcb452d39d3b6343ff4b57a652d","relation":"main_file","file_id":"4924","access_level":"open_access","date_updated":"2020-07-14T12:44:44Z","creator":"system"}],"pubrep_id":"663","date_created":"2018-12-11T11:51:24Z","isi":1,"intvolume":"         8","publisher":"Oxford University Press","department":[{"_id":"BeVi"}],"type":"journal_article","citation":{"apa":"Huylmans, A. K., López Ezquerra, A., Parsch, J., &#38; Cordellier, M. (2016). De novo transcriptome assembly and sex-biased gene expression in the cyclical parthenogenetic Daphnia galeata. <i>Genome Biology and Evolution</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/gbe/evw221\">https://doi.org/10.1093/gbe/evw221</a>","short":"A.K. Huylmans, A. López Ezquerra, J. Parsch, M. Cordellier, Genome Biology and Evolution 8 (2016) 3120–3139.","ama":"Huylmans AK, López Ezquerra A, Parsch J, Cordellier M. De novo transcriptome assembly and sex-biased gene expression in the cyclical parthenogenetic Daphnia galeata. <i>Genome Biology and Evolution</i>. 2016;8(10):3120-3139. doi:<a href=\"https://doi.org/10.1093/gbe/evw221\">10.1093/gbe/evw221</a>","ista":"Huylmans AK, López Ezquerra A, Parsch J, Cordellier M. 2016. De novo transcriptome assembly and sex-biased gene expression in the cyclical parthenogenetic Daphnia galeata. Genome Biology and Evolution. 8(10), 3120–3139.","mla":"Huylmans, Ann K., et al. “De Novo Transcriptome Assembly and Sex-Biased Gene Expression in the Cyclical Parthenogenetic Daphnia Galeata.” <i>Genome Biology and Evolution</i>, vol. 8, no. 10, Oxford University Press, 2016, pp. 3120–39, doi:<a href=\"https://doi.org/10.1093/gbe/evw221\">10.1093/gbe/evw221</a>.","chicago":"Huylmans, Ann K, Alberto López Ezquerra, John Parsch, and Mathilde Cordellier. “De Novo Transcriptome Assembly and Sex-Biased Gene Expression in the Cyclical Parthenogenetic Daphnia Galeata.” <i>Genome Biology and Evolution</i>. Oxford University Press, 2016. <a href=\"https://doi.org/10.1093/gbe/evw221\">https://doi.org/10.1093/gbe/evw221</a>.","ieee":"A. K. Huylmans, A. López Ezquerra, J. Parsch, and M. Cordellier, “De novo transcriptome assembly and sex-biased gene expression in the cyclical parthenogenetic Daphnia galeata,” <i>Genome Biology and Evolution</i>, vol. 8, no. 10. Oxford University Press, pp. 3120–3139, 2016."}},{"date_created":"2018-12-11T11:51:24Z","intvolume":"       216","isi":1,"publisher":"Springer","department":[{"_id":"HeEd"}],"type":"journal_article","citation":{"ista":"Akopyan A, Balitskiy A. 2016. Billiards in convex bodies with acute angles. Israel Journal of Mathematics. 216(2), 833–845.","mla":"Akopyan, Arseniy, and Alexey Balitskiy. “Billiards in Convex Bodies with Acute Angles.” <i>Israel Journal of Mathematics</i>, vol. 216, no. 2, Springer, 2016, pp. 833–45, doi:<a href=\"https://doi.org/10.1007/s11856-016-1429-z\">10.1007/s11856-016-1429-z</a>.","ieee":"A. Akopyan and A. Balitskiy, “Billiards in convex bodies with acute angles,” <i>Israel Journal of Mathematics</i>, vol. 216, no. 2. Springer, pp. 833–845, 2016.","chicago":"Akopyan, Arseniy, and Alexey Balitskiy. “Billiards in Convex Bodies with Acute Angles.” <i>Israel Journal of Mathematics</i>. Springer, 2016. <a href=\"https://doi.org/10.1007/s11856-016-1429-z\">https://doi.org/10.1007/s11856-016-1429-z</a>.","short":"A. Akopyan, A. Balitskiy, Israel Journal of Mathematics 216 (2016) 833–845.","ama":"Akopyan A, Balitskiy A. Billiards in convex bodies with acute angles. <i>Israel Journal of Mathematics</i>. 2016;216(2):833-845. doi:<a href=\"https://doi.org/10.1007/s11856-016-1429-z\">10.1007/s11856-016-1429-z</a>","apa":"Akopyan, A., &#38; Balitskiy, A. (2016). Billiards in convex bodies with acute angles. <i>Israel Journal of Mathematics</i>. Springer. <a href=\"https://doi.org/10.1007/s11856-016-1429-z\">https://doi.org/10.1007/s11856-016-1429-z</a>"},"publication_status":"published","day":"15","date_published":"2016-10-15T00:00:00Z","oa":1,"doi":"10.1007/s11856-016-1429-z","project":[{"_id":"25681D80-B435-11E9-9278-68D0E5697425","grant_number":"291734","name":"International IST Postdoc Fellowship Programme","call_identifier":"FP7"}],"publication":"Israel Journal of Mathematics","language":[{"iso":"eng"}],"issue":"2","scopus_import":"1","corr_author":"1","external_id":{"isi":["000386356400012"],"arxiv":["1506.06014"]},"arxiv":1,"oa_version":"Preprint","article_processing_charge":"No","year":"2016","author":[{"orcid":"0000-0002-2548-617X","last_name":"Akopyan","first_name":"Arseniy","full_name":"Akopyan, Arseniy","id":"430D2C90-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Alexey","full_name":"Balitskiy, Alexey","last_name":"Balitskiy"}],"abstract":[{"text":"In this paper we investigate the existence of closed billiard trajectories in not necessarily smooth convex bodies. In particular, we show that if a body K ⊂ Rd has the property that the tangent cone of every non-smooth point q ∉ ∂K is acute (in a certain sense), then there is a closed billiard trajectory in K.","lang":"eng"}],"date_updated":"2025-09-22T08:23:27Z","ec_funded":1,"page":"833 - 845","main_file_link":[{"url":"https://arxiv.org/abs/1506.06014","open_access":"1"}],"month":"10","quality_controlled":"1","publist_id":"5938","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","acknowledgement":"Supported by People Programme (Marie Curie Actions) of the European Union’s Seventh Framework Programme (FP7/2007-2013) under REA grant agreement n°[291734]. Supported by the Russian Foundation for Basic Research grant 15-31-20403 (mol a ved), by the Russian Foundation for Basic Research grant 15-01-99563 A, in part by the Moebius Contest Foundation for Young Scientists, and in part by the Simons Foundation.","_id":"1330","volume":216,"title":"Billiards in convex bodies with acute angles","status":"public"},{"language":[{"iso":"eng"}],"publication":"Plant Physiology","oa":1,"date_published":"2016-10-02T00:00:00Z","doi":"10.1104/pp.16.00415","day":"02","publication_status":"published","citation":{"apa":"Zwack, P., De Clercq, I., Howton, T., Hallmark, H. T., Hurny, A., Keshishian, E., … Rashotte, A. (2016). Cytokinin response factor 6 represses cytokinin-associated genes during oxidative stress. <i>Plant Physiology</i>. American Society of Plant Biologists. <a href=\"https://doi.org/10.1104/pp.16.00415\">https://doi.org/10.1104/pp.16.00415</a>","ama":"Zwack P, De Clercq I, Howton T, et al. Cytokinin response factor 6 represses cytokinin-associated genes during oxidative stress. <i>Plant Physiology</i>. 2016;172(2):1249-1258. doi:<a href=\"https://doi.org/10.1104/pp.16.00415\">10.1104/pp.16.00415</a>","short":"P. Zwack, I. De Clercq, T. Howton, H.T. Hallmark, A. Hurny, E. Keshishian, A. Parish, E. Benková, M.S. Mukhtar, F. Van Breusegem, A. Rashotte, Plant Physiology 172 (2016) 1249–1258.","chicago":"Zwack, Paul, Inge De Clercq, Timothy Howton, H Tucker Hallmark, Andrej Hurny, Erika Keshishian, Alyssa Parish, et al. “Cytokinin Response Factor 6 Represses Cytokinin-Associated Genes during Oxidative Stress.” <i>Plant Physiology</i>. American Society of Plant Biologists, 2016. <a href=\"https://doi.org/10.1104/pp.16.00415\">https://doi.org/10.1104/pp.16.00415</a>.","ieee":"P. Zwack <i>et al.</i>, “Cytokinin response factor 6 represses cytokinin-associated genes during oxidative stress,” <i>Plant Physiology</i>, vol. 172, no. 2. American Society of Plant Biologists, pp. 1249–1258, 2016.","ista":"Zwack P, De Clercq I, Howton T, Hallmark HT, Hurny A, Keshishian E, Parish A, Benková E, Mukhtar MS, Van Breusegem F, Rashotte A. 2016. Cytokinin response factor 6 represses cytokinin-associated genes during oxidative stress. Plant Physiology. 172(2), 1249–1258.","mla":"Zwack, Paul, et al. “Cytokinin Response Factor 6 Represses Cytokinin-Associated Genes during Oxidative Stress.” <i>Plant Physiology</i>, vol. 172, no. 2, American Society of Plant Biologists, 2016, pp. 1249–58, doi:<a href=\"https://doi.org/10.1104/pp.16.00415\">10.1104/pp.16.00415</a>."},"type":"journal_article","department":[{"_id":"EvBe"}],"isi":1,"intvolume":"       172","publisher":"American Society of Plant Biologists","date_created":"2018-12-11T11:51:25Z","status":"public","volume":172,"title":"Cytokinin response factor 6 represses cytokinin-associated genes during oxidative stress","_id":"1331","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","acknowledgement":"This work was financially supported by the following: The Alabama Agricultural Experiment Station HATCH grants 370222-310010-2055 and 370225-310006-2055 for funding to P.J.Z., E.A.K, A.M.P., and A.M.R. P.J.Z. and E.A.K were supported by an Auburn University Cellular and Molecular Biosciences Research Fellowship. I.D.C. is a postdoctoral fellow of the Research Foundation Flanders (FWO) (FWO/PDO14/043) and is also supported by FWO travel\r\ngrant 12N2415N. F.V.B. was supported by grants from the Interuniversity Attraction Poles Programme (IUAP P7/29 MARS) initiated by the Belgian Science Policy Office and Ghent University (Multidisciplinary Research Partnership Biotechnology for a Sustainable Economy, grant 01MRB510W).","publist_id":"5937","month":"10","quality_controlled":"1","page":"1249 - 1258","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1104/pp.16.00415"}],"article_type":"original","article_processing_charge":"No","author":[{"last_name":"Zwack","first_name":"Paul","full_name":"Zwack, Paul"},{"last_name":"De Clercq","full_name":"De Clercq, Inge","first_name":"Inge"},{"first_name":"Timothy","full_name":"Howton, Timothy","last_name":"Howton"},{"last_name":"Hallmark","full_name":"Hallmark, H Tucker","first_name":"H Tucker"},{"full_name":"Hurny, Andrej","first_name":"Andrej","id":"4DC4AF46-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-3638-1426","last_name":"Hurny"},{"first_name":"Erika","full_name":"Keshishian, Erika","last_name":"Keshishian"},{"last_name":"Parish","first_name":"Alyssa","full_name":"Parish, Alyssa"},{"last_name":"Benková","orcid":"0000-0002-8510-9739","id":"38F4F166-F248-11E8-B48F-1D18A9856A87","full_name":"Benková, Eva","first_name":"Eva"},{"last_name":"Mukhtar","full_name":"Mukhtar, M Shahid","first_name":"M Shahid"},{"last_name":"Van Breusegem","first_name":"Frank","full_name":"Van Breusegem, Frank"},{"last_name":"Rashotte","full_name":"Rashotte, Aaron","first_name":"Aaron"}],"year":"2016","date_updated":"2025-09-22T08:22:54Z","abstract":[{"lang":"eng","text":"Cytokinin is a phytohormone that is well known for its roles in numerous plant growth and developmental processes, yet it has also been linked to abiotic stress response in a less defined manner. Arabidopsis (Arabidopsis thaliana) Cytokinin Response Factor 6 (CRF6) is a cytokinin-responsive AP2/ERF-family transcription factor that, through the cytokinin signaling pathway, plays a key role in the inhibition of dark-induced senescence. CRF6 expression is also induced by oxidative stress, and here we show a novel function for CRF6 in relation to oxidative stress and identify downstream transcriptional targets of CRF6 that are repressed in response to oxidative stress. Analysis of transcriptomic changes in wild-type and crf6 mutant plants treated with H2O2 identified CRF6-dependent differentially expressed transcripts, many of which were repressed rather than induced. Moreover, many repressed genes also show decreased expression in 35S:CRF6 overexpressing plants. Together, these findings suggest that CRF6 functions largely as a transcriptional repressor. Interestingly, among the H2O2 repressed CRF6-dependent transcripts was a set of five genes associated with cytokinin processes: (signaling) ARR6, ARR9, ARR11, (biosynthesis) LOG7, and (transport) ABCG14. We have examined mutants of these cytokinin-associated target genes to reveal novel connections to oxidative stress. Further examination of CRF6-DNA interactions indicated that CRF6 may regulate its targets both directly and indirectly. Together, this shows that CRF6 functions during oxidative stress as a negative regulator to control this cytokinin-associated module of CRF6- dependent genes and establishes a novel connection between cytokinin and oxidative stress response."}],"oa_version":"Published Version","external_id":{"isi":["000391147700047"]},"publication_identifier":{"issn":["0032-0889"],"eissn":["1532-2548"]},"issue":"2","scopus_import":"1"},{"file_date_updated":"2020-07-14T12:44:44Z","publication":"Nature Communications","file":[{"creator":"system","date_updated":"2020-07-14T12:44:44Z","access_level":"open_access","file_id":"5039","checksum":"ef147bcbb8bd37e9079cf3ce06f5815d","relation":"main_file","file_name":"IST-2016-662-v1+1_ncomms10333.pdf","file_size":1844107,"date_created":"2018-12-12T10:13:52Z","content_type":"application/pdf"}],"language":[{"iso":"eng"}],"doi":"10.1038/ncomms10333","oa":1,"date_published":"2016-01-20T00:00:00Z","day":"20","article_number":"10333","publication_status":"published","citation":{"short":"R.P. Chait, A. Palmer, I. Yelin, R. Kishony, Nature Communications 7 (2016).","ama":"Chait RP, Palmer A, Yelin I, Kishony R. Pervasive selection for and against antibiotic resistance in inhomogeneous multistress environments. <i>Nature Communications</i>. 2016;7. doi:<a href=\"https://doi.org/10.1038/ncomms10333\">10.1038/ncomms10333</a>","apa":"Chait, R. P., Palmer, A., Yelin, I., &#38; Kishony, R. (2016). Pervasive selection for and against antibiotic resistance in inhomogeneous multistress environments. <i>Nature Communications</i>. Nature Publishing Group. <a href=\"https://doi.org/10.1038/ncomms10333\">https://doi.org/10.1038/ncomms10333</a>","mla":"Chait, Remy P., et al. “Pervasive Selection for and against Antibiotic Resistance in Inhomogeneous Multistress Environments.” <i>Nature Communications</i>, vol. 7, 10333, Nature Publishing Group, 2016, doi:<a href=\"https://doi.org/10.1038/ncomms10333\">10.1038/ncomms10333</a>.","ista":"Chait RP, Palmer A, Yelin I, Kishony R. 2016. Pervasive selection for and against antibiotic resistance in inhomogeneous multistress environments. Nature Communications. 7, 10333.","chicago":"Chait, Remy P, Adam Palmer, Idan Yelin, and Roy Kishony. “Pervasive Selection for and against Antibiotic Resistance in Inhomogeneous Multistress Environments.” <i>Nature Communications</i>. Nature Publishing Group, 2016. <a href=\"https://doi.org/10.1038/ncomms10333\">https://doi.org/10.1038/ncomms10333</a>.","ieee":"R. P. Chait, A. Palmer, I. Yelin, and R. Kishony, “Pervasive selection for and against antibiotic resistance in inhomogeneous multistress environments,” <i>Nature Communications</i>, vol. 7. Nature Publishing Group, 2016."},"publisher":"Nature Publishing Group","isi":1,"intvolume":"         7","type":"journal_article","department":[{"_id":"CaGu"},{"_id":"GaTk"}],"pubrep_id":"662","date_created":"2018-12-11T11:51:25Z","title":"Pervasive selection for and against antibiotic resistance in inhomogeneous multistress environments","volume":7,"status":"public","acknowledgement":"This work was partially supported by US National Institutes of Health grant R01-GM081617, Israeli Centers of Research Excellence I-CORE Program ISF Grant No. 152/11, and the European Research Council FP7 ERC Grant 281891.","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","_id":"1332","quality_controlled":"1","month":"01","ddc":["570","579"],"publist_id":"5936","has_accepted_license":"1","oa_version":"Published Version","date_updated":"2025-09-22T08:22:19Z","abstract":[{"lang":"eng","text":"Antibiotic-sensitive and -resistant bacteria coexist in natural environments with low, if detectable, antibiotic concentrations. Except possibly around localized antibiotic sources, where resistance can provide a strong advantage, bacterial fitness is dominated by stresses unaffected by resistance to the antibiotic. How do such mixed and heterogeneous conditions influence the selective advantage or disadvantage of antibiotic resistance? Here we find that sub-inhibitory levels of tetracyclines potentiate selection for or against tetracycline resistance around localized sources of almost any toxin or stress. Furthermore, certain stresses generate alternating rings of selection for and against resistance around a localized source of the antibiotic. In these conditions, localized antibiotic sources, even at high strengths, can actually produce a net selection against resistance to the antibiotic. Our results show that interactions between the effects of an antibiotic and other stresses in inhomogeneous environments can generate pervasive, complex patterns of selection both for and against antibiotic resistance."}],"article_processing_charge":"No","year":"2016","author":[{"orcid":"0000-0003-0876-3187","last_name":"Chait","first_name":"Remy P","full_name":"Chait, Remy P","id":"3464AE84-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Palmer","first_name":"Adam","full_name":"Palmer, Adam"},{"last_name":"Yelin","full_name":"Yelin, Idan","first_name":"Idan"},{"last_name":"Kishony","full_name":"Kishony, Roy","first_name":"Roy"}],"external_id":{"isi":["000369021700002"]},"scopus_import":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)"}},{"year":"2016","article_processing_charge":"No","author":[{"first_name":"Manfred","full_name":"Milinski, Manfred","last_name":"Milinski"},{"id":"2FDF8F3C-F248-11E8-B48F-1D18A9856A87","first_name":"Christian","full_name":"Hilbe, Christian","orcid":"0000-0001-5116-955X","last_name":"Hilbe"},{"first_name":"Dirk","full_name":"Semmann, Dirk","last_name":"Semmann"},{"last_name":"Sommerfeld","first_name":"Ralf","full_name":"Sommerfeld, Ralf"},{"last_name":"Marotzke","first_name":"Jochem","full_name":"Marotzke, Jochem"}],"abstract":[{"text":"Social dilemmas force players to balance between personal and collective gain. In many dilemmas, such as elected governments negotiating climate-change mitigation measures, the decisions are made not by individual players but by their representatives. However, the behaviour of representatives in social dilemmas has not been investigated experimentally. Here inspired by the negotiations for greenhouse-gas emissions reductions, we experimentally study a collective-risk social dilemma that involves representatives deciding on behalf of their fellow group members. Representatives can be re-elected or voted out after each consecutive collective-risk game. Selfish players are preferentially elected and are hence found most frequently in the &quot;representatives&quot; treatment. Across all treatments, we identify the selfish players as extortioners. As predicted by our mathematical model, their steadfast strategies enforce cooperation from fair players who finally compensate almost completely the deficit caused by the extortionate co-players. Everybody gains, but the extortionate representatives and their groups gain the most.","lang":"eng"}],"date_updated":"2025-09-22T08:21:34Z","oa_version":"Published Version","has_accepted_license":"1","external_id":{"isi":["000371720200001"]},"corr_author":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)"},"scopus_import":"1","status":"public","volume":7,"title":"Humans choose representatives who enforce cooperation in social dilemmas through extortion","_id":"1333","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","acknowledgement":"We thank the students for participation; H.-J. Krambeck for writing the software for the game; H. Arndt, T. Bakker, L. Becks, H. Brendelberger, S. Dobler and T. Reusch for support; and the Max Planck Society for the Advancement of Science for funding.","publist_id":"5935","month":"03","ddc":["519","530","599"],"quality_controlled":"1","citation":{"ista":"Milinski M, Hilbe C, Semmann D, Sommerfeld R, Marotzke J. 2016. Humans choose representatives who enforce cooperation in social dilemmas through extortion. Nature Communications. 7, 10915.","mla":"Milinski, Manfred, et al. “Humans Choose Representatives Who Enforce Cooperation in Social Dilemmas through Extortion.” <i>Nature Communications</i>, vol. 7, 10915, Nature Publishing Group, 2016, doi:<a href=\"https://doi.org/10.1038/ncomms10915\">10.1038/ncomms10915</a>.","ieee":"M. Milinski, C. Hilbe, D. Semmann, R. Sommerfeld, and J. Marotzke, “Humans choose representatives who enforce cooperation in social dilemmas through extortion,” <i>Nature Communications</i>, vol. 7. Nature Publishing Group, 2016.","chicago":"Milinski, Manfred, Christian Hilbe, Dirk Semmann, Ralf Sommerfeld, and Jochem Marotzke. “Humans Choose Representatives Who Enforce Cooperation in Social Dilemmas through Extortion.” <i>Nature Communications</i>. Nature Publishing Group, 2016. <a href=\"https://doi.org/10.1038/ncomms10915\">https://doi.org/10.1038/ncomms10915</a>.","short":"M. Milinski, C. Hilbe, D. Semmann, R. Sommerfeld, J. Marotzke, Nature Communications 7 (2016).","ama":"Milinski M, Hilbe C, Semmann D, Sommerfeld R, Marotzke J. Humans choose representatives who enforce cooperation in social dilemmas through extortion. <i>Nature Communications</i>. 2016;7. doi:<a href=\"https://doi.org/10.1038/ncomms10915\">10.1038/ncomms10915</a>","apa":"Milinski, M., Hilbe, C., Semmann, D., Sommerfeld, R., &#38; Marotzke, J. (2016). Humans choose representatives who enforce cooperation in social dilemmas through extortion. <i>Nature Communications</i>. Nature Publishing Group. <a href=\"https://doi.org/10.1038/ncomms10915\">https://doi.org/10.1038/ncomms10915</a>"},"type":"journal_article","department":[{"_id":"KrCh"}],"intvolume":"         7","isi":1,"publisher":"Nature Publishing Group","date_created":"2018-12-11T11:51:25Z","pubrep_id":"661","language":[{"iso":"eng"}],"file":[{"checksum":"9ea0d7ce59a555a1cb8353d5559407cb","relation":"main_file","file_name":"IST-2016-661-v1+1_ncomms10915.pdf","file_size":1432577,"date_created":"2018-12-12T10:10:44Z","content_type":"application/pdf","date_updated":"2020-07-14T12:44:44Z","creator":"system","access_level":"open_access","file_id":"4834"}],"publication":"Nature Communications","file_date_updated":"2020-07-14T12:44:44Z","oa":1,"date_published":"2016-03-07T00:00:00Z","doi":"10.1038/ncomms10915","day":"07","publication_status":"published","article_number":"10915"},{"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","_id":"1334","volume":7,"title":"Activity dependent plasticity of hippocampal place maps","status":"public","month":"06","ddc":["570"],"quality_controlled":"1","publist_id":"5934","has_accepted_license":"1","oa_version":"Published Version","year":"2016","author":[{"first_name":"Philipp","full_name":"Schönenberger, Philipp","id":"3B9D816C-F248-11E8-B48F-1D18A9856A87","last_name":"Schönenberger"},{"last_name":"O'Neill","full_name":"O'Neill, Joseph","first_name":"Joseph","id":"426376DC-F248-11E8-B48F-1D18A9856A87"},{"id":"3FA14672-F248-11E8-B48F-1D18A9856A87","first_name":"Jozsef L","full_name":"Csicsvari, Jozsef L","last_name":"Csicsvari","orcid":"0000-0002-5193-4036"}],"article_processing_charge":"No","abstract":[{"text":"Hippocampal neurons encode a cognitive map of space. These maps are thought to be updated during learning and in response to changes in the environment through activity-dependent synaptic plasticity. Here we examine how changes in activity influence spatial coding in rats using halorhodopsin-mediated, spatially selective optogenetic silencing. Halorhoposin stimulation leads to light-induced suppression in many place cells and interneurons; some place cells increase their firing through disinhibition, whereas some show no effect. We find that place fields of the unaffected subpopulation remain stable. On the other hand, place fields of suppressed place cells were unstable, showing remapping across sessions before and after optogenetic inhibition. Disinhibited place cells had stable maps but sustained an elevated firing rate. These findings suggest that place representation in the hippocampus is constantly governed by activity-dependent processes, and that disinhibition may provide a mechanism for rate remapping.","lang":"eng"}],"date_updated":"2025-09-22T08:20:24Z","ec_funded":1,"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)"},"scopus_import":"1","corr_author":"1","external_id":{"isi":["000378007300001"]},"date_published":"2016-06-10T00:00:00Z","oa":1,"doi":"10.1038/ncomms11824","file_date_updated":"2020-07-14T12:44:44Z","project":[{"grant_number":"281511","_id":"257A4776-B435-11E9-9278-68D0E5697425","name":"Memory-related information processing in neuronal circuits of the hippocampus and entorhinal cortex","call_identifier":"FP7"},{"grant_number":"I2072-B27","_id":"257D4372-B435-11E9-9278-68D0E5697425","name":"Interneuron plasticity during spatial learning","call_identifier":"FWF"}],"publication":"Nature Communications","language":[{"iso":"eng"}],"file":[{"file_id":"5196","access_level":"open_access","date_updated":"2020-07-14T12:44:44Z","creator":"system","date_created":"2018-12-12T10:16:10Z","file_size":1793846,"content_type":"application/pdf","file_name":"IST-2016-660-v1+1_ncomms11824.pdf","relation":"main_file","checksum":"e43307754abe65b840a21939fe163618"}],"article_number":"11824","publication_status":"published","day":"10","isi":1,"intvolume":"         7","publisher":"Nature Publishing Group","department":[{"_id":"JoCs"}],"type":"journal_article","citation":{"apa":"Schönenberger, P., O’Neill, J., &#38; Csicsvari, J. L. (2016). Activity dependent plasticity of hippocampal place maps. <i>Nature Communications</i>. Nature Publishing Group. <a href=\"https://doi.org/10.1038/ncomms11824\">https://doi.org/10.1038/ncomms11824</a>","ama":"Schönenberger P, O’Neill J, Csicsvari JL. Activity dependent plasticity of hippocampal place maps. <i>Nature Communications</i>. 2016;7. doi:<a href=\"https://doi.org/10.1038/ncomms11824\">10.1038/ncomms11824</a>","short":"P. Schönenberger, J. O’Neill, J.L. Csicsvari, Nature Communications 7 (2016).","ieee":"P. Schönenberger, J. O’Neill, and J. L. Csicsvari, “Activity dependent plasticity of hippocampal place maps,” <i>Nature Communications</i>, vol. 7. Nature Publishing Group, 2016.","chicago":"Schönenberger, Philipp, Joseph O’Neill, and Jozsef L Csicsvari. “Activity Dependent Plasticity of Hippocampal Place Maps.” <i>Nature Communications</i>. Nature Publishing Group, 2016. <a href=\"https://doi.org/10.1038/ncomms11824\">https://doi.org/10.1038/ncomms11824</a>.","mla":"Schönenberger, Philipp, et al. “Activity Dependent Plasticity of Hippocampal Place Maps.” <i>Nature Communications</i>, vol. 7, 11824, Nature Publishing Group, 2016, doi:<a href=\"https://doi.org/10.1038/ncomms11824\">10.1038/ncomms11824</a>.","ista":"Schönenberger P, O’Neill J, Csicsvari JL. 2016. Activity dependent plasticity of hippocampal place maps. Nature Communications. 7, 11824."},"pubrep_id":"660","date_created":"2018-12-11T11:51:26Z"},{"oa_version":"Preprint","arxiv":1,"article_processing_charge":"No","year":"2016","author":[{"orcid":"0000-0002-4561-241X","last_name":"Chatterjee","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","first_name":"Krishnendu","full_name":"Chatterjee, Krishnendu"},{"orcid":"0000−0002−2985−7724","last_name":"Henzinger","full_name":"Henzinger, Thomas A","first_name":"Thomas A","id":"40876CD8-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Otop, Jan","first_name":"Jan","id":"2FC5DA74-F248-11E8-B48F-1D18A9856A87","last_name":"Otop"}],"abstract":[{"lang":"eng","text":"In this paper we review various automata-theoretic formalisms for expressing quantitative properties. We start with finite-state Boolean automata that express the traditional regular properties. We then consider weighted ω-automata that can measure the average density of events, which finite-state Boolean automata cannot. However, even weighted ω-automata cannot express basic performance properties like average response time. We finally consider two formalisms of weighted ω-automata with monitors, where the monitors are either (a) counters or (b) weighted automata themselves. We present a translation result to establish that these two formalisms are equivalent. Weighted ω-automata with monitors generalize weighted ω-automata, and can express average response time property. They present a natural, robust, and expressive framework for quantitative specifications, with important decidable properties."}],"ec_funded":1,"date_updated":"2025-09-22T08:19:49Z","page":"23 - 38","main_file_link":[{"url":"https://arxiv.org/abs/1604.06764","open_access":"1"}],"scopus_import":"1","corr_author":"1","external_id":{"isi":["000388924600002"],"arxiv":["1604.06764"]},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","_id":"1335","volume":9837,"title":"Quantitative monitor automata","status":"public","month":"08","quality_controlled":"1","publist_id":"5932","intvolume":"      9837","isi":1,"publisher":"Springer","department":[{"_id":"KrCh"},{"_id":"ToHe"}],"type":"conference","citation":{"apa":"Chatterjee, K., Henzinger, T. A., &#38; Otop, J. (2016). Quantitative monitor automata (Vol. 9837, pp. 23–38). Presented at the SAS: Static Analysis Symposium, Edinburgh, United Kingdom: Springer. <a href=\"https://doi.org/10.1007/978-3-662-53413-7_2\">https://doi.org/10.1007/978-3-662-53413-7_2</a>","ama":"Chatterjee K, Henzinger TA, Otop J. Quantitative monitor automata. In: Vol 9837. Springer; 2016:23-38. doi:<a href=\"https://doi.org/10.1007/978-3-662-53413-7_2\">10.1007/978-3-662-53413-7_2</a>","short":"K. Chatterjee, T.A. Henzinger, J. Otop, in:, Springer, 2016, pp. 23–38.","ieee":"K. Chatterjee, T. A. Henzinger, and J. Otop, “Quantitative monitor automata,” presented at the SAS: Static Analysis Symposium, Edinburgh, United Kingdom, 2016, vol. 9837, pp. 23–38.","chicago":"Chatterjee, Krishnendu, Thomas A Henzinger, and Jan Otop. “Quantitative Monitor Automata,” 9837:23–38. Springer, 2016. <a href=\"https://doi.org/10.1007/978-3-662-53413-7_2\">https://doi.org/10.1007/978-3-662-53413-7_2</a>.","mla":"Chatterjee, Krishnendu, et al. <i>Quantitative Monitor Automata</i>. Vol. 9837, Springer, 2016, pp. 23–38, doi:<a href=\"https://doi.org/10.1007/978-3-662-53413-7_2\">10.1007/978-3-662-53413-7_2</a>.","ista":"Chatterjee K, Henzinger TA, Otop J. 2016. Quantitative monitor automata. SAS: Static Analysis Symposium, LNCS, vol. 9837, 23–38."},"date_created":"2018-12-11T11:51:26Z","date_published":"2016-08-31T00:00:00Z","conference":{"start_date":"2016-09-08","end_date":"2016-09-10","location":"Edinburgh, United Kingdom","name":"SAS: Static Analysis Symposium"},"oa":1,"doi":"10.1007/978-3-662-53413-7_2","project":[{"call_identifier":"FWF","name":"Rigorous Systems Engineering","grant_number":"S 11407_N23","_id":"25832EC2-B435-11E9-9278-68D0E5697425"},{"_id":"25F42A32-B435-11E9-9278-68D0E5697425","grant_number":"Z211","name":"Formal methods for the design and analysis of complex systems","call_identifier":"FWF"},{"call_identifier":"FP7","_id":"2581B60A-B435-11E9-9278-68D0E5697425","grant_number":"279307","name":"Quantitative Graph Games: Theory and Applications"},{"name":"Efficient Algorithms for Computer Aided Verification","grant_number":"ICT15-003","_id":"25892FC0-B435-11E9-9278-68D0E5697425"}],"language":[{"iso":"eng"}],"alternative_title":["LNCS"],"publication_status":"published","day":"31"}]