[{"page":"529-537","citation":{"short":"L. Zhou, J.M. Hinerman, M. Blaszczyk, J.L.C. Miller, D.G. Conrady, A.D. Barrow, D.Y. Chirgadze, D. Bihan, R.W. Farndale, A.B. Herr, Blood 127 (2015) 529–537.","ama":"Zhou L, Hinerman JM, Blaszczyk M, et al. Structural basis for collagen recognition by the immune receptor OSCAR. <i>Blood</i>. 2015;127(5):529-537. doi:<a href=\"https://doi.org/10.1182/blood-2015-08-667055\">10.1182/blood-2015-08-667055</a>","chicago":"Zhou, Long, J. M. Hinerman, M. Blaszczyk, J. L. C. Miller, D. G. Conrady, A. D. Barrow, D. Y. Chirgadze, D. Bihan, R. W. Farndale, and A. B. Herr. “Structural Basis for Collagen Recognition by the Immune Receptor OSCAR.” <i>Blood</i>. American Society of Hematology, 2015. <a href=\"https://doi.org/10.1182/blood-2015-08-667055\">https://doi.org/10.1182/blood-2015-08-667055</a>.","mla":"Zhou, Long, et al. “Structural Basis for Collagen Recognition by the Immune Receptor OSCAR.” <i>Blood</i>, vol. 127, no. 5, American Society of Hematology, 2015, pp. 529–37, doi:<a href=\"https://doi.org/10.1182/blood-2015-08-667055\">10.1182/blood-2015-08-667055</a>.","apa":"Zhou, L., Hinerman, J. M., Blaszczyk, M., Miller, J. L. C., Conrady, D. G., Barrow, A. D., … Herr, A. B. (2015). Structural basis for collagen recognition by the immune receptor OSCAR. <i>Blood</i>. American Society of Hematology. <a href=\"https://doi.org/10.1182/blood-2015-08-667055\">https://doi.org/10.1182/blood-2015-08-667055</a>","ista":"Zhou L, Hinerman JM, Blaszczyk M, Miller JLC, Conrady DG, Barrow AD, Chirgadze DY, Bihan D, Farndale RW, Herr AB. 2015. Structural basis for collagen recognition by the immune receptor OSCAR. Blood. 127(5), 529–537.","ieee":"L. Zhou <i>et al.</i>, “Structural basis for collagen recognition by the immune receptor OSCAR,” <i>Blood</i>, vol. 127, no. 5. American Society of Hematology, pp. 529–537, 2015."},"type":"journal_article","intvolume":"       127","status":"public","day":"02","author":[{"id":"3E751364-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-1864-8951","first_name":"Long","last_name":"Zhou","full_name":"Zhou, Long"},{"first_name":"J. M.","last_name":"Hinerman","full_name":"Hinerman, J. M."},{"last_name":"Blaszczyk","full_name":"Blaszczyk, M.","first_name":"M."},{"last_name":"Miller","full_name":"Miller, J. L. C.","first_name":"J. L. C."},{"first_name":"D. G.","full_name":"Conrady, D. G.","last_name":"Conrady"},{"last_name":"Barrow","full_name":"Barrow, A. D.","first_name":"A. D."},{"last_name":"Chirgadze","full_name":"Chirgadze, D. Y.","first_name":"D. Y."},{"first_name":"D.","last_name":"Bihan","full_name":"Bihan, D."},{"first_name":"R. W.","last_name":"Farndale","full_name":"Farndale, R. W."},{"full_name":"Herr, A. B.","last_name":"Herr","first_name":"A. B."}],"volume":127,"title":"Structural basis for collagen recognition by the immune receptor OSCAR","external_id":{"pmid":["26552697"]},"issue":"5","pmid":1,"publication_identifier":{"issn":["0006-4971","1528-0020"]},"oa_version":"None","quality_controlled":"1","language":[{"iso":"eng"}],"date_updated":"2021-01-12T08:07:47Z","date_published":"2015-11-02T00:00:00Z","publication_status":"published","_id":"6507","publication":"Blood","abstract":[{"lang":"eng","text":"The osteoclast-associated receptor (OSCAR) is a collagen-binding immune receptor with important roles in dendritic cell maturation and activation of inflammatory monocytes as well as in osteoclastogenesis. The crystal structure of the OSCAR ectodomain is presented, both free and in complex with a consensus triple-helical peptide (THP). The structures revealed a collagen-binding site in each immunoglobulin-like domain (D1 and D2). The THP binds near a predicted collagen-binding groove in D1, but a more extensive interaction with D2 is facilitated by the unusually wide D1-D2 interdomain angle in OSCAR. Direct binding assays, combined with site-directed mutagenesis, confirm that the primary collagen-binding site in OSCAR resides in D2, in marked contrast to the related collagen receptors, glycoprotein VI (GPVI) and leukocyte-associated immunoglobulin-like receptor-1 (LAIR-1). Monomeric OSCAR D1D2 binds to the consensus THP with a KD of 28 µM measured in solution, but shows a higher affinity (KD 1.5 μM) when binding to a solid-phase THP, most likely due to an avidity effect. These data suggest a 2-stage model for the interaction of OSCAR with a collagen fibril, with transient, low-affinity interactions initiated by the membrane-distal D1, followed by firm adhesion to the primary binding site in D2."}],"extern":"1","doi":"10.1182/blood-2015-08-667055","date_created":"2019-05-31T09:38:50Z","month":"11","publisher":"American Society of Hematology","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","year":"2015"},{"date_updated":"2021-01-12T08:08:45Z","language":[{"iso":"eng"}],"quality_controlled":"1","oa_version":"Preprint","doi":"10.1109/tit.2015.2453315","extern":"1","_id":"6736","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1304.5220"}],"publication":"IEEE Transactions on Information Theory","abstract":[{"text":"Motivated by the significant performance gains which polar codes experience under successive cancellation list decoding, their scaling exponent is studied as a function of the list size. In particular, the error probability is fixed, and the tradeoff between the block length and back-off from capacity is analyzed. A lower bound is provided on the error probability under MAP decoding with list size L for any binary-input memoryless output-symmetric channel and for any class of linear codes such that their minimum distance is unbounded as the block length grows large. Then, it is shown that under MAP decoding, although the introduction of a list can significantly improve the involved constants, the scaling exponent itself, i.e., the speed at which capacity is approached, stays unaffected for any finite list size. In particular, this result applies to polar codes, since their minimum distance tends to infinity as the block length increases. A similar result is proved for genie-aided successive cancellation decoding when transmission takes place over the binary erasure channel, namely, the scaling exponent remains constant for any fixed number of helps from the genie. Note that since genie-aided successive cancellation decoding might be strictly worse than successive cancellation list decoding, the problem of establishing the scaling exponent of the latter remains open.","lang":"eng"}],"date_published":"2015-09-01T00:00:00Z","publication_status":"published","publisher":"IEEE","month":"09","date_created":"2019-07-31T06:50:34Z","year":"2015","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","type":"journal_article","oa":1,"arxiv":1,"citation":{"chicago":"Mondelli, Marco, Hamed Hassani, and Rudiger Urbanke. “Scaling Exponent of List Decoders with Applications to Polar Codes.” <i>IEEE Transactions on Information Theory</i>. IEEE, 2015. <a href=\"https://doi.org/10.1109/tit.2015.2453315\">https://doi.org/10.1109/tit.2015.2453315</a>.","ama":"Mondelli M, Hassani H, Urbanke R. Scaling exponent of list decoders with applications to polar codes. <i>IEEE Transactions on Information Theory</i>. 2015;61(9):4838-4851. doi:<a href=\"https://doi.org/10.1109/tit.2015.2453315\">10.1109/tit.2015.2453315</a>","short":"M. Mondelli, H. Hassani, R. Urbanke, IEEE Transactions on Information Theory 61 (2015) 4838–4851.","ieee":"M. Mondelli, H. Hassani, and R. Urbanke, “Scaling exponent of list decoders with applications to polar codes,” <i>IEEE Transactions on Information Theory</i>, vol. 61, no. 9. IEEE, pp. 4838–4851, 2015.","ista":"Mondelli M, Hassani H, Urbanke R. 2015. Scaling exponent of list decoders with applications to polar codes. IEEE Transactions on Information Theory. 61(9), 4838–4851.","apa":"Mondelli, M., Hassani, H., &#38; Urbanke, R. (2015). Scaling exponent of list decoders with applications to polar codes. <i>IEEE Transactions on Information Theory</i>. IEEE. <a href=\"https://doi.org/10.1109/tit.2015.2453315\">https://doi.org/10.1109/tit.2015.2453315</a>","mla":"Mondelli, Marco, et al. “Scaling Exponent of List Decoders with Applications to Polar Codes.” <i>IEEE Transactions on Information Theory</i>, vol. 61, no. 9, IEEE, 2015, pp. 4838–51, doi:<a href=\"https://doi.org/10.1109/tit.2015.2453315\">10.1109/tit.2015.2453315</a>."},"page":"4838-4851","day":"01","status":"public","intvolume":"        61","title":"Scaling exponent of list decoders with applications to polar codes","external_id":{"arxiv":["1304.5220"]},"volume":61,"author":[{"full_name":"Mondelli, Marco","last_name":"Mondelli","orcid":"0000-0002-3242-7020","first_name":"Marco","id":"27EB676C-8706-11E9-9510-7717E6697425"},{"full_name":"Hassani, Hamed","last_name":"Hassani","first_name":"Hamed"},{"full_name":"Urbanke, Rudiger","last_name":"Urbanke","first_name":"Rudiger"}],"issue":"9"},{"year":"2015","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"IEEE","date_created":"2019-07-31T07:03:38Z","month":"02","extern":"1","doi":"10.1109/tit.2014.2368555","publication_status":"published","date_published":"2015-02-01T00:00:00Z","abstract":[{"text":"This paper presents polar coding schemes for the two-user discrete memoryless broadcast channel (DM-BC) which achieve Marton's region with both common and private messages. This is the best achievable rate region known to date, and it is tight for all classes of two-user DM-BCs whose capacity regions are known. To accomplish this task, we first construct polar codes for both the superposition as well as binning strategy. By combining these two schemes, we obtain Marton's region with private messages only. Finally, we show how to handle the case of common information. The proposed coding schemes possess the usual advantages of polar codes, i.e., they have low encoding and decoding complexity and a superpolynomial decay rate of the error probability. We follow the lead of Goela, Abbe, and Gastpar, who recently introduced polar codes emulating the superposition and binning schemes. To align the polar indices, for both schemes, their solution involves some degradedness constraints that are assumed to hold between the auxiliary random variables and channel outputs. To remove these constraints, we consider the transmission of k blocks and employ a chaining construction that guarantees the proper alignment of the polarized indices. The techniques described in this paper are quite general, and they can be adopted to many other multiterminal scenarios whenever there polar indices need to be aligned.","lang":"eng"}],"_id":"6737","main_file_link":[{"url":"https://arxiv.org/abs/1401.6060","open_access":"1"}],"publication":"IEEE Transactions on Information Theory","date_updated":"2021-01-12T08:08:46Z","language":[{"iso":"eng"}],"oa_version":"Preprint","quality_controlled":"1","issue":"2","external_id":{"arxiv":["1401.6060"]},"title":"Achieving Marton’s region for broadcast channels using polar codes","author":[{"id":"27EB676C-8706-11E9-9510-7717E6697425","first_name":"Marco","orcid":"0000-0002-3242-7020","full_name":"Mondelli, Marco","last_name":"Mondelli"},{"full_name":"Hassani, Hamed","last_name":"Hassani","first_name":"Hamed"},{"first_name":"Igal","full_name":"Sason, Igal","last_name":"Sason"},{"last_name":"Urbanke","full_name":"Urbanke, Rudiger","first_name":"Rudiger"}],"volume":61,"day":"01","intvolume":"        61","status":"public","oa":1,"type":"journal_article","citation":{"ieee":"M. Mondelli, H. Hassani, I. Sason, and R. Urbanke, “Achieving Marton’s region for broadcast channels using polar codes,” <i>IEEE Transactions on Information Theory</i>, vol. 61, no. 2. IEEE, pp. 783–800, 2015.","ista":"Mondelli M, Hassani H, Sason I, Urbanke R. 2015. Achieving Marton’s region for broadcast channels using polar codes. IEEE Transactions on Information Theory. 61(2), 783–800.","apa":"Mondelli, M., Hassani, H., Sason, I., &#38; Urbanke, R. (2015). Achieving Marton’s region for broadcast channels using polar codes. <i>IEEE Transactions on Information Theory</i>. IEEE. <a href=\"https://doi.org/10.1109/tit.2014.2368555\">https://doi.org/10.1109/tit.2014.2368555</a>","mla":"Mondelli, Marco, et al. “Achieving Marton’s Region for Broadcast Channels Using Polar Codes.” <i>IEEE Transactions on Information Theory</i>, vol. 61, no. 2, IEEE, 2015, pp. 783–800, doi:<a href=\"https://doi.org/10.1109/tit.2014.2368555\">10.1109/tit.2014.2368555</a>.","chicago":"Mondelli, Marco, Hamed Hassani, Igal Sason, and Rudiger Urbanke. “Achieving Marton’s Region for Broadcast Channels Using Polar Codes.” <i>IEEE Transactions on Information Theory</i>. IEEE, 2015. <a href=\"https://doi.org/10.1109/tit.2014.2368555\">https://doi.org/10.1109/tit.2014.2368555</a>.","short":"M. Mondelli, H. Hassani, I. Sason, R. Urbanke, IEEE Transactions on Information Theory 61 (2015) 783–800.","ama":"Mondelli M, Hassani H, Sason I, Urbanke R. Achieving Marton’s region for broadcast channels using polar codes. <i>IEEE Transactions on Information Theory</i>. 2015;61(2):783-800. doi:<a href=\"https://doi.org/10.1109/tit.2014.2368555\">10.1109/tit.2014.2368555</a>"},"page":"783-800","arxiv":1},{"extern":"1","doi":"10.1103/physrevb.92.180509","publication_status":"published","date_published":"2015-11-23T00:00:00Z","abstract":[{"lang":"eng","text":"Torque magnetization measurements on YBa2Cu3Oy (YBCO) at doping y=6.67 (p=0.12), in dc fields (B) up to 33 T and temperatures down to 4.5 K, show that weak diamagnetism persists above the extrapolated irreversibility field Hirr(T=0)≈24 T. The differential susceptibility dM/dB, however, is more rapidly suppressed for B≳16 T than expected from the properties of the low field superconducting state, and saturates at a low value for fields B≳24 T. In addition, torque measurements on a p=0.11 YBCO crystal in pulsed field up to 65 T and temperatures down to 8 K show similar behavior, with no additional features at higher fields. We offer two candidate scenarios to explain these observations: (a) superconductivity survives but is heavily suppressed at high field by competition with charge-density-wave (CDW) order; (b) static superconductivity disappears near 24 T and is followed by a region of fluctuating superconductivity, which causes dM/dB to saturate at high field. The diamagnetic signal observed above 50 T for the p=0.11 crystal at 40 K and below may be caused by changes in the normal state susceptibility rather than bulk or fluctuating superconductivity. There will be orbital (Landau) diamagnetism from electron pockets and possibly a reduction in spin susceptibility caused by the stronger three-dimensional ordered CDW."}],"_id":"7070","publication":"Physical Review B","date_updated":"2021-01-12T08:11:42Z","language":[{"iso":"eng"}],"oa_version":"None","publication_identifier":{"issn":["1098-0121","1550-235X"]},"quality_controlled":"1","year":"2015","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_type":"original","publisher":"APS","date_created":"2019-11-19T13:22:06Z","month":"11","day":"23","intvolume":"        92","status":"public","article_processing_charge":"No","type":"journal_article","citation":{"mla":"Yu, Jing Fei, et al. “Magnetization of Underdoped YBa2Cu3Oy above the Irreversibility Field.” <i>Physical Review B</i>, vol. 92, no. 18, 180509, APS, 2015, doi:<a href=\"https://doi.org/10.1103/physrevb.92.180509\">10.1103/physrevb.92.180509</a>.","ista":"Yu JF, Ramshaw BJ, Kokanović I, Modic KA, Harrison N, Day J, Liang R, Hardy WN, Bonn DA, McCollam A, Julian SR, Cooper JR. 2015. Magnetization of underdoped YBa2Cu3Oy above the irreversibility field. Physical Review B. 92(18), 180509.","apa":"Yu, J. F., Ramshaw, B. J., Kokanović, I., Modic, K. A., Harrison, N., Day, J., … Cooper, J. R. (2015). Magnetization of underdoped YBa2Cu3Oy above the irreversibility field. <i>Physical Review B</i>. APS. <a href=\"https://doi.org/10.1103/physrevb.92.180509\">https://doi.org/10.1103/physrevb.92.180509</a>","ieee":"J. F. Yu <i>et al.</i>, “Magnetization of underdoped YBa2Cu3Oy above the irreversibility field,” <i>Physical Review B</i>, vol. 92, no. 18. APS, 2015.","ama":"Yu JF, Ramshaw BJ, Kokanović I, et al. Magnetization of underdoped YBa2Cu3Oy above the irreversibility field. <i>Physical Review B</i>. 2015;92(18). doi:<a href=\"https://doi.org/10.1103/physrevb.92.180509\">10.1103/physrevb.92.180509</a>","short":"J.F. Yu, B.J. Ramshaw, I. Kokanović, K.A. Modic, N. Harrison, J. Day, R. Liang, W.N. Hardy, D.A. Bonn, A. McCollam, S.R. Julian, J.R. Cooper, Physical Review B 92 (2015).","chicago":"Yu, Jing Fei, B. J. Ramshaw, I. Kokanović, Kimberly A Modic, N. Harrison, James Day, Ruixing Liang, et al. “Magnetization of Underdoped YBa2Cu3Oy above the Irreversibility Field.” <i>Physical Review B</i>. APS, 2015. <a href=\"https://doi.org/10.1103/physrevb.92.180509\">https://doi.org/10.1103/physrevb.92.180509</a>."},"issue":"18","title":"Magnetization of underdoped YBa2Cu3Oy above the irreversibility field","article_number":"180509","author":[{"full_name":"Yu, Jing Fei","last_name":"Yu","first_name":"Jing Fei"},{"first_name":"B. J.","last_name":"Ramshaw","full_name":"Ramshaw, B. J."},{"first_name":"I.","full_name":"Kokanović, I.","last_name":"Kokanović"},{"last_name":"Modic","full_name":"Modic, Kimberly A","first_name":"Kimberly A","id":"13C26AC0-EB69-11E9-87C6-5F3BE6697425","orcid":"0000-0001-9760-3147"},{"first_name":"N.","last_name":"Harrison","full_name":"Harrison, N."},{"last_name":"Day","full_name":"Day, James","first_name":"James"},{"last_name":"Liang","full_name":"Liang, Ruixing","first_name":"Ruixing"},{"last_name":"Hardy","full_name":"Hardy, W. N.","first_name":"W. N."},{"full_name":"Bonn, D. A.","last_name":"Bonn","first_name":"D. A."},{"last_name":"McCollam","full_name":"McCollam, A.","first_name":"A."},{"first_name":"S. R.","full_name":"Julian, S. R.","last_name":"Julian"},{"full_name":"Cooper, J. R.","last_name":"Cooper","first_name":"J. R."}],"volume":92},{"intvolume":"         7","day":"14","citation":{"ama":"Caruntu D, Rostamzadeh T, Costanzo T, Salemizadeh Parizi S, Caruntu G. Solvothermal synthesis and controlled self-assembly of monodisperse titanium-based perovskite colloidal nanocrystals. <i>Nanoscale</i>. 2015;7(30):12955-12969. doi:<a href=\"https://doi.org/10.1039/c5nr00737b\">10.1039/c5nr00737b</a>","short":"D. Caruntu, T. Rostamzadeh, T. Costanzo, S. Salemizadeh Parizi, G. Caruntu, Nanoscale 7 (2015) 12955–12969.","chicago":"Caruntu, Daniela, Taha Rostamzadeh, Tommaso Costanzo, Saman Salemizadeh Parizi, and Gabriel Caruntu. “Solvothermal Synthesis and Controlled Self-Assembly of Monodisperse Titanium-Based Perovskite Colloidal Nanocrystals.” <i>Nanoscale</i>. RSC, 2015. <a href=\"https://doi.org/10.1039/c5nr00737b\">https://doi.org/10.1039/c5nr00737b</a>.","apa":"Caruntu, D., Rostamzadeh, T., Costanzo, T., Salemizadeh Parizi, S., &#38; Caruntu, G. (2015). Solvothermal synthesis and controlled self-assembly of monodisperse titanium-based perovskite colloidal nanocrystals. <i>Nanoscale</i>. RSC. <a href=\"https://doi.org/10.1039/c5nr00737b\">https://doi.org/10.1039/c5nr00737b</a>","ista":"Caruntu D, Rostamzadeh T, Costanzo T, Salemizadeh Parizi S, Caruntu G. 2015. Solvothermal synthesis and controlled self-assembly of monodisperse titanium-based perovskite colloidal nanocrystals. Nanoscale. 7(30), 12955–12969.","mla":"Caruntu, Daniela, et al. “Solvothermal Synthesis and Controlled Self-Assembly of Monodisperse Titanium-Based Perovskite Colloidal Nanocrystals.” <i>Nanoscale</i>, vol. 7, no. 30, RSC, 2015, pp. 12955–69, doi:<a href=\"https://doi.org/10.1039/c5nr00737b\">10.1039/c5nr00737b</a>.","ieee":"D. Caruntu, T. Rostamzadeh, T. Costanzo, S. Salemizadeh Parizi, and G. Caruntu, “Solvothermal synthesis and controlled self-assembly of monodisperse titanium-based perovskite colloidal nanocrystals,” <i>Nanoscale</i>, vol. 7, no. 30. RSC, pp. 12955–12969, 2015."},"type":"journal_article","article_processing_charge":"No","issue":"30","author":[{"full_name":"Caruntu, Daniela","last_name":"Caruntu","first_name":"Daniela"},{"first_name":"Taha","last_name":"Rostamzadeh","full_name":"Rostamzadeh, Taha"},{"id":"D93824F4-D9BA-11E9-BB12-F207E6697425","first_name":"Tommaso","orcid":"0000-0001-9732-3815","full_name":"Costanzo, Tommaso","last_name":"Costanzo"},{"last_name":"Salemizadeh Parizi","full_name":"Salemizadeh Parizi, Saman","first_name":"Saman"},{"last_name":"Caruntu","full_name":"Caruntu, Gabriel","first_name":"Gabriel"}],"external_id":{"pmid":["26168304"]},"publication_status":"published","publication":"Nanoscale","abstract":[{"lang":"eng","text":"The rational design of monodisperse ferroelectric nanocrystals with controlled size and shape and their organization into hierarchical structures has been a critical step for understanding the polar ordering in nanoscale ferroelectrics, as well as the design of nanocrystal-based functional materials which harness the properties of individual nanoparticles and the collective interactions between them. We report here on the synthesis and self-assembly of aggregate-free, single-crystalline titanium-based perovskite nanoparticles with controlled morphology and surface composition by using a simple, easily scalable and highly versatile colloidal route. Single-crystalline, non-aggregated BaTiO3 colloidal nanocrystals, used as a model system, have been prepared under solvothermal conditions at temperatures as low as 180 °C. The shape of the nanocrystals was tuned from spheroidal to cubic upon changing the polarity of the solvent, whereas their size was varied from 16 to 30 nm for spheres and 5 to 78 nm for cubes by changing the concentration of the precursors and the reaction time, respectively. The hydrophobic, oleic acid-passivated nanoparticles exhibit very good solubility in non-polar solvents and can be rendered dispersible in polar solvents by a simple process involving the oxidative cleavage of the double bond upon treating the nanopowders with the Lemieux–von Rudloff reagent. Lattice dynamic analysis indicated that regardless of their size, BaTiO3 nanocrystals present local disorder within the perovskite unit cell, associated with the existence of polar ordering. We also demonstrate for the first time that, in addition to being used for fabricating large area, crack-free, highly uniform films, BaTiO3 nanocubes can serve as building blocks for the design of 2D and 3D mesoscale structures, such as superlattices and superparticles. Interestingly, the type of superlattice structure (simple cubic or face centered cubic) appears to be determined by the type of solvent in which the nanocrystals were dispersed. This approach provides an excellent platform for the synthesis of other titanium-based perovskite colloidal nanocrystals with controlled chemical composition, surface structure and morphology and for their assembly into complex architectures, therefore opening the door for the design of novel mesoscale functional materials/nanocomposites with potential applications in energy conversion, data storage and the biomedical field."}],"doi":"10.1039/c5nr00737b","extern":"1","pmid":1,"publication_identifier":{"issn":["2040-3364","2040-3372"]},"oa_version":"None","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2020-02-05T14:16:37Z","publisher":"RSC","article_type":"original","status":"public","page":"12955-12969","volume":7,"title":"Solvothermal synthesis and controlled self-assembly of monodisperse titanium-based perovskite colloidal nanocrystals","date_published":"2015-08-14T00:00:00Z","_id":"7456","quality_controlled":"1","date_updated":"2023-02-23T13:08:24Z","language":[{"iso":"eng"}],"year":"2015","month":"08"},{"publisher":"RSC","article_type":"original","month":"09","date_created":"2020-02-05T14:17:26Z","year":"2015","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","language":[{"iso":"eng"}],"date_updated":"2023-02-23T13:08:26Z","quality_controlled":"1","publication_identifier":{"issn":["2046-2069"]},"oa_version":"Submitted Version","doi":"10.1039/c5ra11347d","extern":"1","_id":"7457","publication":"RSC Advances","abstract":[{"lang":"eng","text":"A new organic–inorganic ferroelectric hybrid capacitor designed by uniformly incorporating surface modified monodisperse 15 nm ferroelectric BaTiO3 nanocubes into non-polar polymer blends of poly(methyl methacrylate) (PMMA) polymer and acrylonitrile-butadiene-styrene (ABS) terpolymer is described. The investigation of spatial distribution of nanofillers via a non-distractive thermal pulse method illustrates that the surface functionalization of nanocubes plays a key role in the uniform distribution of charge polarization within the polymer matrix. The discharged energy density of the nanocomposite with 30 vol% BaTiO3 nanocubes is ∼44 × 10−3 J cm−3, which is almost six times higher than that of the neat polymer. The facile processing, along with the superior mechanical and electrical properties of the BaTiO3/PMMA–ABS nanocomposites make them suitable for implementation into capacitive electrical energy storage devices."}],"publication_status":"published","date_published":"2015-09-01T00:00:00Z","title":"Fabrication of barium titanate/acrylonitrile-butadiene styrene/poly(methyl methacrylate) nanocomposite films for hybrid ferroelectric capacitors","volume":5,"author":[{"first_name":"Saman Salemizadeh","full_name":"Parizi, Saman Salemizadeh","last_name":"Parizi"},{"last_name":"Conley","full_name":"Conley, Gavin","first_name":"Gavin"},{"id":"D93824F4-D9BA-11E9-BB12-F207E6697425","first_name":"Tommaso","orcid":"0000-0001-9732-3815","last_name":"Costanzo","full_name":"Costanzo, Tommaso"},{"full_name":"Howell, Bob","last_name":"Howell","first_name":"Bob"},{"last_name":"Mellinger","full_name":"Mellinger, Axel","first_name":"Axel"},{"last_name":"Caruntu","full_name":"Caruntu, Gabriel","first_name":"Gabriel"}],"issue":"93","type":"journal_article","article_processing_charge":"No","page":"76356-76362","citation":{"chicago":"Parizi, Saman Salemizadeh, Gavin Conley, Tommaso Costanzo, Bob Howell, Axel Mellinger, and Gabriel Caruntu. “Fabrication of Barium Titanate/Acrylonitrile-Butadiene Styrene/Poly(Methyl Methacrylate) Nanocomposite Films for Hybrid Ferroelectric Capacitors.” <i>RSC Advances</i>. RSC, 2015. <a href=\"https://doi.org/10.1039/c5ra11347d\">https://doi.org/10.1039/c5ra11347d</a>.","short":"S.S. Parizi, G. Conley, T. Costanzo, B. Howell, A. Mellinger, G. Caruntu, RSC Advances 5 (2015) 76356–76362.","ama":"Parizi SS, Conley G, Costanzo T, Howell B, Mellinger A, Caruntu G. Fabrication of barium titanate/acrylonitrile-butadiene styrene/poly(methyl methacrylate) nanocomposite films for hybrid ferroelectric capacitors. <i>RSC Advances</i>. 2015;5(93):76356-76362. doi:<a href=\"https://doi.org/10.1039/c5ra11347d\">10.1039/c5ra11347d</a>","ieee":"S. S. Parizi, G. Conley, T. Costanzo, B. Howell, A. Mellinger, and G. Caruntu, “Fabrication of barium titanate/acrylonitrile-butadiene styrene/poly(methyl methacrylate) nanocomposite films for hybrid ferroelectric capacitors,” <i>RSC Advances</i>, vol. 5, no. 93. RSC, pp. 76356–76362, 2015.","mla":"Parizi, Saman Salemizadeh, et al. “Fabrication of Barium Titanate/Acrylonitrile-Butadiene Styrene/Poly(Methyl Methacrylate) Nanocomposite Films for Hybrid Ferroelectric Capacitors.” <i>RSC Advances</i>, vol. 5, no. 93, RSC, 2015, pp. 76356–62, doi:<a href=\"https://doi.org/10.1039/c5ra11347d\">10.1039/c5ra11347d</a>.","apa":"Parizi, S. S., Conley, G., Costanzo, T., Howell, B., Mellinger, A., &#38; Caruntu, G. (2015). Fabrication of barium titanate/acrylonitrile-butadiene styrene/poly(methyl methacrylate) nanocomposite films for hybrid ferroelectric capacitors. <i>RSC Advances</i>. RSC. <a href=\"https://doi.org/10.1039/c5ra11347d\">https://doi.org/10.1039/c5ra11347d</a>","ista":"Parizi SS, Conley G, Costanzo T, Howell B, Mellinger A, Caruntu G. 2015. Fabrication of barium titanate/acrylonitrile-butadiene styrene/poly(methyl methacrylate) nanocomposite films for hybrid ferroelectric capacitors. RSC Advances. 5(93), 76356–76362."},"day":"01","status":"public","intvolume":"         5"},{"intvolume":"        11","day":"14","citation":{"mla":"Higginbotham, Andrew P., et al. “Parity Lifetime of Bound States in a Proximitized Semiconductor Nanowire.” <i>Nature Physics</i>, vol. 11, no. 12, Nature Publishing Group, 2015, pp. 1017–21, doi:<a href=\"https://doi.org/10.1038/nphys3461\">10.1038/nphys3461</a>.","ista":"Higginbotham AP, Albrecht SM, Kiršanskas G, Chang W, Kuemmeth F, Krogstrup P, Jespersen T, Nygård J, Flensberg K, Marcus C. 2015. Parity lifetime of bound states in a proximitized semiconductor nanowire. Nature Physics. 11(12), 1017–1021.","apa":"Higginbotham, A. P., Albrecht, S. M., Kiršanskas, G., Chang, W., Kuemmeth, F., Krogstrup, P., … Marcus, C. (2015). Parity lifetime of bound states in a proximitized semiconductor nanowire. <i>Nature Physics</i>. Nature Publishing Group. <a href=\"https://doi.org/10.1038/nphys3461\">https://doi.org/10.1038/nphys3461</a>","ieee":"A. P. Higginbotham <i>et al.</i>, “Parity lifetime of bound states in a proximitized semiconductor nanowire,” <i>Nature Physics</i>, vol. 11, no. 12. Nature Publishing Group, pp. 1017–1021, 2015.","short":"A.P. Higginbotham, S.M. Albrecht, G. Kiršanskas, W. Chang, F. Kuemmeth, P. Krogstrup, T. Jespersen, J. Nygård, K. Flensberg, C. Marcus, Nature Physics 11 (2015) 1017–1021.","ama":"Higginbotham AP, Albrecht SM, Kiršanskas G, et al. Parity lifetime of bound states in a proximitized semiconductor nanowire. <i>Nature Physics</i>. 2015;11(12):1017-1021. doi:<a href=\"https://doi.org/10.1038/nphys3461\">10.1038/nphys3461</a>","chicago":"Higginbotham, Andrew P, S M Albrecht, Gediminas Kiršanskas, W Chang, Ferdinand Kuemmeth, Peter Krogstrup, Thomas Jespersen, Jesper Nygård, Karsten Flensberg, and Charles Marcus. “Parity Lifetime of Bound States in a Proximitized Semiconductor Nanowire.” <i>Nature Physics</i>. Nature Publishing Group, 2015. <a href=\"https://doi.org/10.1038/nphys3461\">https://doi.org/10.1038/nphys3461</a>."},"oa":1,"type":"journal_article","acknowledgement":"Research support by Microsoft Project Q, the Danish National Research Foundation, the Lundbeck Foundation, the Carlsberg Foundation, and the European Commission. A.P.H. acknowledges support from the US Department of Energy, C.M.M. acknowledges support from the Villum Foundation.","issue":"12","author":[{"first_name":"Andrew P","id":"4AD6785A-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-2607-2363","last_name":"Higginbotham","full_name":"Higginbotham, Andrew P"},{"first_name":"S M","full_name":"Albrecht, S M","last_name":"Albrecht"},{"first_name":"Gediminas","last_name":"Kiršanskas","full_name":"Kiršanskas, Gediminas"},{"last_name":"Chang","full_name":"Chang, W","first_name":"W"},{"first_name":"Ferdinand","full_name":"Kuemmeth, Ferdinand","last_name":"Kuemmeth"},{"first_name":"Peter","full_name":"Krogstrup, Peter","last_name":"Krogstrup"},{"first_name":"Thomas","full_name":"Jespersen, Thomas","last_name":"Jespersen"},{"first_name":"Jesper","full_name":"Nygård, Jesper","last_name":"Nygård"},{"full_name":"Flensberg, Karsten","last_name":"Flensberg","first_name":"Karsten"},{"full_name":"Marcus, Charles","last_name":"Marcus","first_name":"Charles"}],"external_id":{"arxiv":["1501.05155"]},"publication_status":"published","publication":"Nature Physics","abstract":[{"text":"Quasiparticle excitations can compromise the performance of superconducting devices, causing high-frequency dissipation, decoherence in Josephson qubits, and braiding errors in proposed Majorana-based topological quantum computers. Quasiparticle dynamics have been studied in detail in metallic superconductors but remain relatively unexplored in semiconductor-superconductor structures, which are now being intensely pursued in the context of topological superconductivity. To this end, we use a system comprising a gate-confined semiconductor nanowire with an epitaxially grown superconductor layer, yielding an isolated, proximitized nanowire segment. We identify bound states in the semiconductor by means of bias spectroscopy, determine the characteristic temperatures and magnetic fields for quasiparticle excitations, and extract a parity lifetime (poisoning time) of the bound state in the semiconductor exceeding 10 ms.","lang":"eng"}],"doi":"10.1038/nphys3461","extern":"1","oa_version":"Preprint","publist_id":"7955","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","date_created":"2018-12-11T11:44:37Z","publisher":"Nature Publishing Group","status":"public","page":"1017 - 1021","arxiv":1,"volume":11,"title":"Parity lifetime of bound states in a proximitized semiconductor nanowire","date_published":"2015-09-14T00:00:00Z","main_file_link":[{"url":"https://arxiv.org/abs/1501.05155","open_access":"1"}],"_id":"99","quality_controlled":"1","date_updated":"2021-01-12T08:22:28Z","language":[{"iso":"eng"}],"year":"2015","month":"09"},{"project":[{"_id":"25EB3A80-B435-11E9-9278-68D0E5697425","grant_number":"RGP0042/2013","name":"Revealing the fundamental limits of cell growth"},{"call_identifier":"FWF","name":"Revealing the mechanisms underlying drug interactions","_id":"25E9AF9E-B435-11E9-9278-68D0E5697425","grant_number":"P27201-B22"},{"_id":"25E83C2C-B435-11E9-9278-68D0E5697425","name":"Optimality principles in responses to antibiotics","grant_number":"303507","call_identifier":"FP7"}],"issue":"11","department":[{"_id":"ToBo"}],"ec_funded":1,"article_number":"e1002299","scopus_import":"1","external_id":{"isi":["000365898900011"]},"isi":1,"author":[{"full_name":"Chevereau, Guillaume","last_name":"Chevereau","id":"424D78A0-F248-11E8-B48F-1D18A9856A87","first_name":"Guillaume"},{"full_name":"Dravecka, Marta","last_name":"Dravecka","orcid":"0000-0002-2519-8004","first_name":"Marta","id":"4342E402-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Batur, Tugce","last_name":"Batur","first_name":"Tugce"},{"full_name":"Guvenek, Aysegul","last_name":"Guvenek","first_name":"Aysegul"},{"first_name":"Dilay","full_name":"Ayhan, Dilay","last_name":"Ayhan"},{"first_name":"Erdal","full_name":"Toprak, Erdal","last_name":"Toprak"},{"first_name":"Mark Tobias","id":"3E6DB97A-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-4398-476X","full_name":"Bollenbach, Mark Tobias","last_name":"Bollenbach"}],"day":"18","file_date_updated":"2020-07-14T12:45:07Z","intvolume":"        13","type":"journal_article","article_processing_charge":"No","oa":1,"citation":{"chicago":"Chevereau, Guillaume, Marta Lukacisinova, Tugce Batur, Aysegul Guvenek, Dilay Ayhan, Erdal Toprak, and Mark Tobias Bollenbach. “Quantifying the Determinants of Evolutionary Dynamics Leading to Drug Resistance.” <i>PLoS Biology</i>. Public Library of Science, 2015. <a href=\"https://doi.org/10.1371/journal.pbio.1002299\">https://doi.org/10.1371/journal.pbio.1002299</a>.","short":"G. Chevereau, M. Lukacisinova, T. Batur, A. Guvenek, D. Ayhan, E. Toprak, M.T. Bollenbach, PLoS Biology 13 (2015).","ama":"Chevereau G, Lukacisinova M, Batur T, et al. Quantifying the determinants of evolutionary dynamics leading to drug resistance. <i>PLoS Biology</i>. 2015;13(11). doi:<a href=\"https://doi.org/10.1371/journal.pbio.1002299\">10.1371/journal.pbio.1002299</a>","ieee":"G. Chevereau <i>et al.</i>, “Quantifying the determinants of evolutionary dynamics leading to drug resistance,” <i>PLoS Biology</i>, vol. 13, no. 11. Public Library of Science, 2015.","mla":"Chevereau, Guillaume, et al. “Quantifying the Determinants of Evolutionary Dynamics Leading to Drug Resistance.” <i>PLoS Biology</i>, vol. 13, no. 11, e1002299, Public Library of Science, 2015, doi:<a href=\"https://doi.org/10.1371/journal.pbio.1002299\">10.1371/journal.pbio.1002299</a>.","apa":"Chevereau, G., Lukacisinova, M., Batur, T., Guvenek, A., Ayhan, D., Toprak, E., &#38; Bollenbach, M. T. (2015). Quantifying the determinants of evolutionary dynamics leading to drug resistance. <i>PLoS Biology</i>. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pbio.1002299\">https://doi.org/10.1371/journal.pbio.1002299</a>","ista":"Chevereau G, Lukacisinova M, Batur T, Guvenek A, Ayhan D, Toprak E, Bollenbach MT. 2015. Quantifying the determinants of evolutionary dynamics leading to drug resistance. PLoS Biology. 13(11), e1002299."},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","publisher":"Public Library of Science","date_created":"2018-12-11T11:53:04Z","doi":"10.1371/journal.pbio.1002299","file":[{"file_size":1387760,"date_created":"2018-12-12T10:09:00Z","content_type":"application/pdf","relation":"main_file","access_level":"open_access","creator":"system","file_id":"4723","date_updated":"2020-07-14T12:45:07Z","checksum":"0e82e3279f50b15c6c170c042627802b","file_name":"IST-2016-468-v1+1_journal.pbio.1002299.pdf"}],"abstract":[{"text":"The emergence of drug resistant pathogens is a serious public health problem. It is a long-standing goal to predict rates of resistance evolution and design optimal treatment strategies accordingly. To this end, it is crucial to reveal the underlying causes of drug-specific differences in the evolutionary dynamics leading to resistance. However, it remains largely unknown why the rates of resistance evolution via spontaneous mutations and the diversity of mutational paths vary substantially between drugs. Here we comprehensively quantify the distribution of fitness effects (DFE) of mutations, a key determinant of evolutionary dynamics, in the presence of eight antibiotics representing the main modes of action. Using precise high-throughput fitness measurements for genome-wide Escherichia coli gene deletion strains, we find that the width of the DFE varies dramatically between antibiotics and, contrary to conventional wisdom, for some drugs the DFE width is lower than in the absence of stress. We show that this previously underappreciated divergence in DFE width among antibiotics is largely caused by their distinct drug-specific dose-response characteristics. Unlike the DFE, the magnitude of the changes in tolerated drug concentration resulting from genome-wide mutations is similar for most drugs but exceptionally small for the antibiotic nitrofurantoin, i.e., mutations generally have considerably smaller resistance effects for nitrofurantoin than for other drugs. A population genetics model predicts that resistance evolution for drugs with this property is severely limited and confined to reproducible mutational paths. We tested this prediction in laboratory evolution experiments using the “morbidostat”, a device for evolving bacteria in well-controlled drug environments. Nitrofurantoin resistance indeed evolved extremely slowly via reproducible mutations—an almost paradoxical behavior since this drug causes DNA damage and increases the mutation rate. Overall, we identified novel quantitative characteristics of the evolutionary landscape that provide the conceptual foundation for predicting the dynamics of drug resistance evolution.","lang":"eng"}],"publication":"PLoS Biology","publication_status":"published","publist_id":"5547","oa_version":"Published Version","title":"Quantifying the determinants of evolutionary dynamics leading to drug resistance","volume":13,"status":"public","corr_author":"1","year":"2015","ddc":["570"],"related_material":{"record":[{"status":"public","id":"9711","relation":"research_data"},{"status":"public","id":"9765","relation":"research_data"},{"id":"6263","relation":"dissertation_contains","status":"public"}]},"month":"11","has_accepted_license":"1","tmp":{"short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png"},"_id":"1619","date_published":"2015-11-18T00:00:00Z","language":[{"iso":"eng"}],"date_updated":"2026-06-30T22:30:40Z","quality_controlled":"1","pubrep_id":"468"},{"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","series_title":"Mathematics and Visualization","date_created":"2022-03-04T08:33:57Z","place":"Cham","publisher":"Springer Nature","publication_status":"published","abstract":[{"lang":"eng","text":"The Morse-Smale complex can be either explicitly or implicitly represented. Depending on the type of representation, the simplification of the Morse-Smale complex works differently. In the explicit representation, the Morse-Smale complex is directly simplified by explicitly reconnecting the critical points during the simplification. In the implicit representation, on the other hand, the Morse-Smale complex is given by a combinatorial gradient field. In this setting, the simplification changes the combinatorial flow, which yields an indirect simplification of the Morse-Smale complex. The topological complexity of the Morse-Smale complex is reduced in both representations. However, the simplifications generally yield different results. In this chapter, we emphasize properties of the two representations that cause these differences. We also provide a complexity analysis of the two schemes with respect to running time and memory consumption."}],"publication":"Topological Methods in Data Analysis and Visualization III.","doi":"10.1007/978-3-319-04099-8_9","oa_version":"None","publication_identifier":{"issn":["1612-3786"],"eisbn":["9783319040998"],"eissn":["2197-666X"],"isbn":["9783319040981"]},"ec_funded":1,"acknowledgement":"This research is supported and funded by the Digiteo unTopoVis project, the TOPOSYS project FP7-ICT-318493-STREP, and MPC-VCC.","department":[{"_id":"HeEd"}],"project":[{"call_identifier":"FP7","_id":"255D761E-B435-11E9-9278-68D0E5697425","grant_number":"318493","name":"Topological Complex Systems"}],"author":[{"full_name":"Günther, David","last_name":"Günther","first_name":"David"},{"last_name":"Reininghaus","full_name":"Reininghaus, Jan","id":"4505473A-F248-11E8-B48F-1D18A9856A87","first_name":"Jan"},{"last_name":"Seidel","full_name":"Seidel, Hans-Peter","first_name":"Hans-Peter"},{"first_name":"Tino","last_name":"Weinkauf","full_name":"Weinkauf, Tino"}],"scopus_import":"1","day":"19","citation":{"short":"D. Günther, J. Reininghaus, H.-P. Seidel, T. Weinkauf, in:, P.-T. Bremer, I. Hotz, V. Pascucci, R. Peikert (Eds.), Topological Methods in Data Analysis and Visualization III., Springer Nature, Cham, 2014, pp. 135–150.","ama":"Günther D, Reininghaus J, Seidel H-P, Weinkauf T. Notes on the simplification of the Morse-Smale complex. In: Bremer P-T, Hotz I, Pascucci V, Peikert R, eds. <i>Topological Methods in Data Analysis and Visualization III.</i> Mathematics and Visualization. Cham: Springer Nature; 2014:135-150. doi:<a href=\"https://doi.org/10.1007/978-3-319-04099-8_9\">10.1007/978-3-319-04099-8_9</a>","chicago":"Günther, David, Jan Reininghaus, Hans-Peter Seidel, and Tino Weinkauf. “Notes on the Simplification of the Morse-Smale Complex.” In <i>Topological Methods in Data Analysis and Visualization III.</i>, edited by Peer-Timo Bremer, Ingrid Hotz, Valerio Pascucci, and Ronald Peikert, 135–50. Mathematics and Visualization. Cham: Springer Nature, 2014. <a href=\"https://doi.org/10.1007/978-3-319-04099-8_9\">https://doi.org/10.1007/978-3-319-04099-8_9</a>.","apa":"Günther, D., Reininghaus, J., Seidel, H.-P., &#38; Weinkauf, T. (2014). Notes on the simplification of the Morse-Smale complex. In P.-T. Bremer, I. Hotz, V. Pascucci, &#38; R. Peikert (Eds.), <i>Topological Methods in Data Analysis and Visualization III.</i> (pp. 135–150). Cham: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-319-04099-8_9\">https://doi.org/10.1007/978-3-319-04099-8_9</a>","ista":"Günther D, Reininghaus J, Seidel H-P, Weinkauf T. 2014.Notes on the simplification of the Morse-Smale complex. In: Topological Methods in Data Analysis and Visualization III. , 135–150.","mla":"Günther, David, et al. “Notes on the Simplification of the Morse-Smale Complex.” <i>Topological Methods in Data Analysis and Visualization III.</i>, edited by Peer-Timo Bremer et al., Springer Nature, 2014, pp. 135–50, doi:<a href=\"https://doi.org/10.1007/978-3-319-04099-8_9\">10.1007/978-3-319-04099-8_9</a>.","ieee":"D. Günther, J. Reininghaus, H.-P. Seidel, and T. Weinkauf, “Notes on the simplification of the Morse-Smale complex,” in <i>Topological Methods in Data Analysis and Visualization III.</i>, P.-T. Bremer, I. Hotz, V. Pascucci, and R. Peikert, Eds. Cham: Springer Nature, 2014, pp. 135–150."},"type":"book_chapter","article_processing_charge":"No","year":"2014","month":"03","date_published":"2014-03-19T00:00:00Z","_id":"10817","quality_controlled":"1","editor":[{"first_name":"Peer-Timo","full_name":"Bremer, Peer-Timo","last_name":"Bremer"},{"first_name":"Ingrid","last_name":"Hotz","full_name":"Hotz, Ingrid"},{"full_name":"Pascucci, Valerio","last_name":"Pascucci","first_name":"Valerio"},{"full_name":"Peikert, Ronald","last_name":"Peikert","first_name":"Ronald"}],"date_updated":"2025-04-15T08:37:54Z","language":[{"iso":"eng"}],"title":"Notes on the simplification of the Morse-Smale complex","status":"public","page":"135-150"},{"day":"30","intvolume":"      8318","article_processing_charge":"No","type":"conference","oa":1,"citation":{"chicago":"Aminof, Benjamin, Swen Jacobs, Ayrat Khalimov, and Sasha Rubin. “Parameterized Model Checking of Token-Passing Systems.” In <i>Verification, Model Checking, and Abstract Interpretation</i>, 8318:262–81. Springer Nature, 2014. <a href=\"https://doi.org/10.1007/978-3-642-54013-4_15\">https://doi.org/10.1007/978-3-642-54013-4_15</a>.","ama":"Aminof B, Jacobs S, Khalimov A, Rubin S. Parameterized model checking of token-passing systems. In: <i>Verification, Model Checking, and Abstract Interpretation</i>. Vol 8318. Springer Nature; 2014:262-281. doi:<a href=\"https://doi.org/10.1007/978-3-642-54013-4_15\">10.1007/978-3-642-54013-4_15</a>","short":"B. Aminof, S. Jacobs, A. Khalimov, S. Rubin, in:, Verification, Model Checking, and Abstract Interpretation, Springer Nature, 2014, pp. 262–281.","ieee":"B. Aminof, S. Jacobs, A. Khalimov, and S. Rubin, “Parameterized model checking of token-passing systems,” in <i>Verification, Model Checking, and Abstract Interpretation</i>, San Diego, CA, United States, 2014, vol. 8318, pp. 262–281.","apa":"Aminof, B., Jacobs, S., Khalimov, A., &#38; Rubin, S. (2014). Parameterized model checking of token-passing systems. In <i>Verification, Model Checking, and Abstract Interpretation</i> (Vol. 8318, pp. 262–281). San Diego, CA, United States: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-642-54013-4_15\">https://doi.org/10.1007/978-3-642-54013-4_15</a>","ista":"Aminof B, Jacobs S, Khalimov A, Rubin S. 2014. Parameterized model checking of token-passing systems. Verification, Model Checking, and Abstract Interpretation. VMCAI: Verifcation, Model Checking, and Abstract Interpretation, LNCS, vol. 8318, 262–281.","mla":"Aminof, Benjamin, et al. “Parameterized Model Checking of Token-Passing Systems.” <i>Verification, Model Checking, and Abstract Interpretation</i>, vol. 8318, Springer Nature, 2014, pp. 262–81, doi:<a href=\"https://doi.org/10.1007/978-3-642-54013-4_15\">10.1007/978-3-642-54013-4_15</a>."},"project":[{"call_identifier":"FWF","grant_number":"P 23499-N23","_id":"2584A770-B435-11E9-9278-68D0E5697425","name":"Modern Graph Algorithmic Techniques in Formal Verification"},{"call_identifier":"FWF","grant_number":"S11407","name":"Game Theory","_id":"25863FF4-B435-11E9-9278-68D0E5697425"},{"_id":"2581B60A-B435-11E9-9278-68D0E5697425","grant_number":"279307","name":"Quantitative Graph Games: Theory and Applications","call_identifier":"FP7"}],"acknowledgement":"This work was supported by the Austrian Science Fund through grant P23499-N23\r\nand through the RiSE network (S11403, S11405, S11406, S11407-N23); ERC Starting Grant (279307: Graph Games); Vienna Science and Technology Fund (WWTF)\r\ngrants PROSEED, ICT12-059, and VRG11-005.","department":[{"_id":"KrCh"}],"ec_funded":1,"scopus_import":"1","external_id":{"arxiv":["1311.4425"]},"author":[{"first_name":"Benjamin","id":"4A55BD00-F248-11E8-B48F-1D18A9856A87","last_name":"Aminof","full_name":"Aminof, Benjamin"},{"last_name":"Jacobs","full_name":"Jacobs, Swen","first_name":"Swen"},{"last_name":"Khalimov","full_name":"Khalimov, Ayrat","first_name":"Ayrat"},{"id":"2EC51194-F248-11E8-B48F-1D18A9856A87","first_name":"Sasha","full_name":"Rubin, Sasha","last_name":"Rubin"}],"doi":"10.1007/978-3-642-54013-4_15","abstract":[{"text":"We revisit the parameterized model checking problem for token-passing systems and specifications in indexed CTL  ∗ \\X. Emerson and Namjoshi (1995, 2003) have shown that parameterized model checking of indexed CTL  ∗ \\X in uni-directional token rings can be reduced to checking rings up to some cutoff size. Clarke et al. (2004) have shown a similar result for general topologies and indexed LTL \\X, provided processes cannot choose the directions for sending or receiving the token.\r\nWe unify and substantially extend these results by systematically exploring fragments of indexed CTL  ∗ \\X with respect to general topologies. For each fragment we establish whether a cutoff exists, and for some concrete topologies, such as rings, cliques and stars, we infer small cutoffs. Finally, we show that the problem becomes undecidable, and thus no cutoffs exist, if processes are allowed to choose the directions in which they send or from which they receive the token.","lang":"eng"}],"publication":"Verification, Model Checking, and Abstract Interpretation","publication_status":"published","publication_identifier":{"issn":["0302-9743"],"isbn":["9783642540127"],"eissn":["1611-3349"],"eisbn":["9783642540134"]},"oa_version":"Preprint","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"Springer Nature","date_created":"2022-03-18T13:01:22Z","status":"public","arxiv":1,"page":"262-281","title":"Parameterized model checking of token-passing systems","volume":8318,"alternative_title":["LNCS"],"_id":"10884","main_file_link":[{"url":" https://doi.org/10.48550/arXiv.1311.4425","open_access":"1"}],"date_published":"2014-01-30T00:00:00Z","date_updated":"2025-04-15T06:29:59Z","language":[{"iso":"eng"}],"quality_controlled":"1","year":"2014","conference":{"location":"San Diego, CA, United States","name":"VMCAI: Verifcation, Model Checking, and Abstract Interpretation","start_date":"2014-01-19","end_date":"2014-01-21"},"month":"01"},{"status":"public","arxiv":1,"page":"78-97","volume":8318,"title":"Doomsday equilibria for omega-regular games","_id":"10885","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.1311.3238","open_access":"1"}],"date_published":"2014-01-30T00:00:00Z","alternative_title":["LNCS"],"quality_controlled":"1","language":[{"iso":"eng"}],"date_updated":"2026-04-16T10:00:03Z","year":"2014","conference":{"location":"San Diego, CA, United States","name":"VMCAI: Verifcation, Model Checking, and Abstract Interpretation","start_date":"2014-01-19","end_date":"2014-01-21"},"month":"01","related_material":{"record":[{"relation":"later_version","id":"681","status":"public"}]},"intvolume":"      8318","day":"30","OA_place":"repository","citation":{"short":"K. Chatterjee, L. Doyen, E. Filiot, J.-F. Raskin, in:, VMCAI 2014: Verification, Model Checking, and Abstract Interpretation, Springer Nature, 2014, pp. 78–97.","ama":"Chatterjee K, Doyen L, Filiot E, Raskin J-F. Doomsday equilibria for omega-regular games. In: <i>VMCAI 2014: Verification, Model Checking, and Abstract Interpretation</i>. Vol 8318. Springer Nature; 2014:78-97. doi:<a href=\"https://doi.org/10.1007/978-3-642-54013-4_5\">10.1007/978-3-642-54013-4_5</a>","chicago":"Chatterjee, Krishnendu, Laurent Doyen, Emmanuel Filiot, and Jean-François Raskin. “Doomsday Equilibria for Omega-Regular Games.” In <i>VMCAI 2014: Verification, Model Checking, and Abstract Interpretation</i>, 8318:78–97. Springer Nature, 2014. <a href=\"https://doi.org/10.1007/978-3-642-54013-4_5\">https://doi.org/10.1007/978-3-642-54013-4_5</a>.","mla":"Chatterjee, Krishnendu, et al. “Doomsday Equilibria for Omega-Regular Games.” <i>VMCAI 2014: Verification, Model Checking, and Abstract Interpretation</i>, vol. 8318, Springer Nature, 2014, pp. 78–97, doi:<a href=\"https://doi.org/10.1007/978-3-642-54013-4_5\">10.1007/978-3-642-54013-4_5</a>.","ista":"Chatterjee K, Doyen L, Filiot E, Raskin J-F. 2014. Doomsday equilibria for omega-regular games. VMCAI 2014: Verification, Model Checking, and Abstract Interpretation. VMCAI: Verifcation, Model Checking, and Abstract Interpretation, LNCS, vol. 8318, 78–97.","apa":"Chatterjee, K., Doyen, L., Filiot, E., &#38; Raskin, J.-F. (2014). Doomsday equilibria for omega-regular games. In <i>VMCAI 2014: Verification, Model Checking, and Abstract Interpretation</i> (Vol. 8318, pp. 78–97). San Diego, CA, United States: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-642-54013-4_5\">https://doi.org/10.1007/978-3-642-54013-4_5</a>","ieee":"K. Chatterjee, L. Doyen, E. Filiot, and J.-F. Raskin, “Doomsday equilibria for omega-regular games,” in <i>VMCAI 2014: Verification, Model Checking, and Abstract Interpretation</i>, San Diego, CA, United States, 2014, vol. 8318, pp. 78–97."},"type":"conference","article_processing_charge":"No","oa":1,"ec_funded":1,"project":[{"call_identifier":"FWF","_id":"2584A770-B435-11E9-9278-68D0E5697425","grant_number":"P 23499-N23","name":"Modern Graph Algorithmic Techniques in Formal Verification"},{"_id":"25863FF4-B435-11E9-9278-68D0E5697425","grant_number":"S11407","name":"Game Theory","call_identifier":"FWF"},{"grant_number":"279307","name":"Quantitative Graph Games: Theory and Applications","_id":"2581B60A-B435-11E9-9278-68D0E5697425","call_identifier":"FP7"},{"name":"Microsoft Research Faculty Fellowship","_id":"2587B514-B435-11E9-9278-68D0E5697425"}],"acknowledgement":" Supported by Austrian Science Fund (FWF) Grant No P23499-N23, FWF NFN Grant No\r\nS11407-N23 (RiSE), ERC Start grant (279307: Graph Games), and Microsoft faculty fellows award.","department":[{"_id":"KrCh"}],"OA_type":"green","author":[{"last_name":"Chatterjee","full_name":"Chatterjee, Krishnendu","first_name":"Krishnendu","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-4561-241X"},{"full_name":"Doyen, Laurent","last_name":"Doyen","first_name":"Laurent"},{"first_name":"Emmanuel","full_name":"Filiot, Emmanuel","last_name":"Filiot"},{"full_name":"Raskin, Jean-François","last_name":"Raskin","first_name":"Jean-François"}],"scopus_import":"1","external_id":{"arxiv":["1311.3238"]},"publication":"VMCAI 2014: Verification, Model Checking, and Abstract Interpretation","abstract":[{"lang":"eng","text":"Two-player games on graphs provide the theoretical framework for many important problems such as reactive synthesis. While the traditional study of two-player zero-sum games has been extended to multi-player games with several notions of equilibria, they are decidable only for perfect-information games, whereas several applications require imperfect-information games.\r\nIn this paper we propose a new notion of equilibria, called doomsday equilibria, which is a strategy profile such that all players satisfy their own objective, and if any coalition of players deviates and violates even one of the players objective, then the objective of every player is violated.\r\nWe present algorithms and complexity results for deciding the existence of doomsday equilibria for various classes of ω-regular objectives, both for imperfect-information games, and for perfect-information games.We provide optimal complexity bounds for imperfect-information games, and in most cases for perfect-information games."}],"publication_status":"published","doi":"10.1007/978-3-642-54013-4_5","oa_version":"Preprint","publication_identifier":{"issn":["0302-9743"],"isbn":["9783642540127"],"eissn":["1611-3349"],"eisbn":["9783642540134"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2022-03-18T13:03:15Z","publisher":"Springer Nature"},{"type":"conference","article_processing_charge":"No","citation":{"chicago":"Zobel, Valentin, Jan Reininghaus, and Ingrid Hotz. “Visualization of Two-Dimensional Symmetric Positive Definite Tensor Fields Using the Heat Kernel Signature.” In <i>Topological Methods in Data Analysis and Visualization III </i>, 249–62. Springer, 2014. <a href=\"https://doi.org/10.1007/978-3-319-04099-8_16\">https://doi.org/10.1007/978-3-319-04099-8_16</a>.","short":"V. Zobel, J. Reininghaus, I. Hotz, in:, Topological Methods in Data Analysis and Visualization III , Springer, 2014, pp. 249–262.","ama":"Zobel V, Reininghaus J, Hotz I. Visualization of two-dimensional symmetric positive definite tensor fields using the heat kernel signature. In: <i>Topological Methods in Data Analysis and Visualization III </i>. Springer; 2014:249-262. doi:<a href=\"https://doi.org/10.1007/978-3-319-04099-8_16\">10.1007/978-3-319-04099-8_16</a>","ieee":"V. Zobel, J. Reininghaus, and I. Hotz, “Visualization of two-dimensional symmetric positive definite tensor fields using the heat kernel signature,” in <i>Topological Methods in Data Analysis and Visualization III </i>, 2014, pp. 249–262.","mla":"Zobel, Valentin, et al. “Visualization of Two-Dimensional Symmetric Positive Definite Tensor Fields Using the Heat Kernel Signature.” <i>Topological Methods in Data Analysis and Visualization III </i>, Springer, 2014, pp. 249–62, doi:<a href=\"https://doi.org/10.1007/978-3-319-04099-8_16\">10.1007/978-3-319-04099-8_16</a>.","apa":"Zobel, V., Reininghaus, J., &#38; Hotz, I. (2014). Visualization of two-dimensional symmetric positive definite tensor fields using the heat kernel signature. In <i>Topological Methods in Data Analysis and Visualization III </i> (pp. 249–262). Springer. <a href=\"https://doi.org/10.1007/978-3-319-04099-8_16\">https://doi.org/10.1007/978-3-319-04099-8_16</a>","ista":"Zobel V, Reininghaus J, Hotz I. 2014. Visualization of two-dimensional symmetric positive definite tensor fields using the heat kernel signature. Topological Methods in Data Analysis and Visualization III . , Mathematics and Visualization, , 249–262."},"page":"249-262","day":"19","status":"public","scopus_import":"1","title":"Visualization of two-dimensional symmetric positive definite tensor fields using the heat kernel signature","author":[{"first_name":"Valentin","last_name":"Zobel","full_name":"Zobel, Valentin"},{"full_name":"Reininghaus, Jan","last_name":"Reininghaus","id":"4505473A-F248-11E8-B48F-1D18A9856A87","first_name":"Jan"},{"first_name":"Ingrid","last_name":"Hotz","full_name":"Hotz, Ingrid"}],"department":[{"_id":"HeEd"}],"acknowledgement":"This research is partially supported by the TOPOSYS project FP7-ICT-318493-STREP.","date_updated":"2023-09-05T14:13:16Z","language":[{"iso":"eng"}],"quality_controlled":"1","oa_version":"None","publication_identifier":{"issn":["1612-3786"],"isbn":["9783319040981"],"eissn":["2197-666X"],"eisbn":["9783319040998"]},"alternative_title":["Mathematics and Visualization"],"doi":"10.1007/978-3-319-04099-8_16","_id":"10886","abstract":[{"text":"We propose a method for visualizing two-dimensional symmetric positive definite tensor fields using the Heat Kernel Signature (HKS). The HKS is derived from the heat kernel and was originally introduced as an isometry invariant shape signature. Each positive definite tensor field defines a Riemannian manifold by considering the tensor field as a Riemannian metric. On this Riemmanian manifold we can apply the definition of the HKS. The resulting scalar quantity is used for the visualization of tensor fields. The HKS is closely related to the Gaussian curvature of the Riemannian manifold and the time parameter of the heat kernel allows a multiscale analysis in a natural way. In this way, the HKS represents field related scale space properties, enabling a level of detail analysis of tensor fields. This makes the HKS an interesting new scalar quantity for tensor fields, which differs significantly from usual tensor invariants like the trace or the determinant. A method for visualization and a numerical realization of the HKS for tensor fields is proposed in this chapter. To validate the approach we apply it to some illustrating simple examples as isolated critical points and to a medical diffusion tensor data set.","lang":"eng"}],"publication":"Topological Methods in Data Analysis and Visualization III ","date_published":"2014-03-19T00:00:00Z","publication_status":"published","publisher":"Springer","month":"03","date_created":"2022-03-18T13:05:39Z","year":"2014","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1"},{"title":"Planar matchings for weighted straight skeletons","volume":8889,"status":"public","page":"117-127","corr_author":"1","conference":{"location":"Jeonju, Korea","name":"ISAAC: International Symposium on Algorithms and Computation","start_date":"2014-12-15","end_date":"2014-12-17"},"year":"2014","related_material":{"record":[{"id":"481","relation":"later_version","status":"public"}]},"month":"11","alternative_title":["LNCS"],"date_published":"2014-11-08T00:00:00Z","_id":"10892","date_updated":"2025-09-29T13:22:55Z","language":[{"iso":"eng"}],"quality_controlled":"1","department":[{"_id":"HeEd"}],"acknowledgement":"T. Biedl was supported by NSERC and the Ross and Muriel Cheriton Fellowship. P. Palfrader was supported by Austrian Science Fund (FWF): P25816-N15.","external_id":{"isi":["000354865900010"]},"isi":1,"scopus_import":"1","author":[{"first_name":"Therese","full_name":"Biedl, Therese","last_name":"Biedl"},{"full_name":"Huber, Stefan","last_name":"Huber","orcid":"0000-0002-8871-5814","id":"4700A070-F248-11E8-B48F-1D18A9856A87","first_name":"Stefan"},{"last_name":"Palfrader","full_name":"Palfrader, Peter","first_name":"Peter"}],"day":"08","intvolume":"      8889","type":"conference","article_processing_charge":"No","citation":{"ieee":"T. Biedl, S. Huber, and P. Palfrader, “Planar matchings for weighted straight skeletons,” in <i>25th International Symposium, ISAAC 2014</i>, Jeonju, Korea, 2014, vol. 8889, pp. 117–127.","ista":"Biedl T, Huber S, Palfrader P. 2014. Planar matchings for weighted straight skeletons. 25th International Symposium, ISAAC 2014. ISAAC: International Symposium on Algorithms and Computation, LNCS, vol. 8889, 117–127.","apa":"Biedl, T., Huber, S., &#38; Palfrader, P. (2014). Planar matchings for weighted straight skeletons. In <i>25th International Symposium, ISAAC 2014</i> (Vol. 8889, pp. 117–127). Jeonju, Korea: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-319-13075-0_10\">https://doi.org/10.1007/978-3-319-13075-0_10</a>","mla":"Biedl, Therese, et al. “Planar Matchings for Weighted Straight Skeletons.” <i>25th International Symposium, ISAAC 2014</i>, vol. 8889, Springer Nature, 2014, pp. 117–27, doi:<a href=\"https://doi.org/10.1007/978-3-319-13075-0_10\">10.1007/978-3-319-13075-0_10</a>.","chicago":"Biedl, Therese, Stefan Huber, and Peter Palfrader. “Planar Matchings for Weighted Straight Skeletons.” In <i>25th International Symposium, ISAAC 2014</i>, 8889:117–27. Springer Nature, 2014. <a href=\"https://doi.org/10.1007/978-3-319-13075-0_10\">https://doi.org/10.1007/978-3-319-13075-0_10</a>.","short":"T. Biedl, S. Huber, P. Palfrader, in:, 25th International Symposium, ISAAC 2014, Springer Nature, 2014, pp. 117–127.","ama":"Biedl T, Huber S, Palfrader P. Planar matchings for weighted straight skeletons. In: <i>25th International Symposium, ISAAC 2014</i>. Vol 8889. Springer Nature; 2014:117-127. doi:<a href=\"https://doi.org/10.1007/978-3-319-13075-0_10\">10.1007/978-3-319-13075-0_10</a>"},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","publisher":"Springer Nature","date_created":"2022-03-21T07:09:03Z","doi":"10.1007/978-3-319-13075-0_10","publication_status":"published","abstract":[{"lang":"eng","text":"In this paper, we introduce planar matchings on directed pseudo-line arrangements, which yield a planar set of pseudo-line segments such that only matching-partners are adjacent. By translating the planar matching problem into a corresponding stable roommates problem we show that such matchings always exist.\r\nUsing our new framework, we establish, for the first time, a complete, rigorous definition of weighted straight skeletons, which are based on a so-called wavefront propagation process. We present a generalized and unified approach to treat structural changes in the wavefront that focuses on the restoration of weak planarity by finding planar matchings."}],"publication":"25th International Symposium, ISAAC 2014","publication_identifier":{"issn":["0302-9743"],"isbn":["9783319130743"],"eissn":["1611-3349"],"eisbn":["9783319130750"]},"oa_version":"None"},{"day":"19","intvolume":"         1","article_processing_charge":"No","type":"book_chapter","citation":{"ieee":"J. Kasten, J. Reininghaus, W. Reich, and G. Scheuermann, “Toward the extraction of saddle periodic orbits,” in <i>Topological Methods in Data Analysis and Visualization III </i>, vol. 1, P.-T. Bremer, I. Hotz, V. Pascucci, and R. Peikert, Eds. Cham: Springer, 2014, pp. 55–69.","ista":"Kasten J, Reininghaus J, Reich W, Scheuermann G. 2014.Toward the extraction of saddle periodic orbits. In: Topological Methods in Data Analysis and Visualization III . vol. 1, 55–69.","apa":"Kasten, J., Reininghaus, J., Reich, W., &#38; Scheuermann, G. (2014). Toward the extraction of saddle periodic orbits. In P.-T. Bremer, I. Hotz, V. Pascucci, &#38; R. Peikert (Eds.), <i>Topological Methods in Data Analysis and Visualization III </i> (Vol. 1, pp. 55–69). Cham: Springer. <a href=\"https://doi.org/10.1007/978-3-319-04099-8_4\">https://doi.org/10.1007/978-3-319-04099-8_4</a>","mla":"Kasten, Jens, et al. “Toward the Extraction of Saddle Periodic Orbits.” <i>Topological Methods in Data Analysis and Visualization III </i>, edited by Peer-Timo Bremer et al., vol. 1, Springer, 2014, pp. 55–69, doi:<a href=\"https://doi.org/10.1007/978-3-319-04099-8_4\">10.1007/978-3-319-04099-8_4</a>.","chicago":"Kasten, Jens, Jan Reininghaus, Wieland Reich, and Gerik Scheuermann. “Toward the Extraction of Saddle Periodic Orbits.” In <i>Topological Methods in Data Analysis and Visualization III </i>, edited by Peer-Timo Bremer, Ingrid Hotz, Valerio Pascucci, and Ronald Peikert, 1:55–69. Mathematics and Visualization. Cham: Springer, 2014. <a href=\"https://doi.org/10.1007/978-3-319-04099-8_4\">https://doi.org/10.1007/978-3-319-04099-8_4</a>.","ama":"Kasten J, Reininghaus J, Reich W, Scheuermann G. Toward the extraction of saddle periodic orbits. In: Bremer P-T, Hotz I, Pascucci V, Peikert R, eds. <i>Topological Methods in Data Analysis and Visualization III </i>. Vol 1. Mathematics and Visualization. Cham: Springer; 2014:55-69. doi:<a href=\"https://doi.org/10.1007/978-3-319-04099-8_4\">10.1007/978-3-319-04099-8_4</a>","short":"J. Kasten, J. Reininghaus, W. Reich, G. Scheuermann, in:, P.-T. Bremer, I. Hotz, V. Pascucci, R. Peikert (Eds.), Topological Methods in Data Analysis and Visualization III , Springer, Cham, 2014, pp. 55–69."},"department":[{"_id":"HeEd"}],"acknowledgement":"First, we thank the reviewers of this paper for their ideas and critical comments. In addition, we thank Ronny Peikert and Filip Sadlo for a fruitful discussions. This research is supported by the European Commission under the TOPOSYS project FP7-ICT-318493-STREP, the European Social Fund (ESF App. No. 100098251), and the European Science Foundation under the ACAT Research Network Program.","project":[{"grant_number":"318493","_id":"255D761E-B435-11E9-9278-68D0E5697425","name":"Topological Complex Systems","call_identifier":"FP7"}],"ec_funded":1,"scopus_import":"1","author":[{"full_name":"Kasten, Jens","last_name":"Kasten","first_name":"Jens"},{"id":"4505473A-F248-11E8-B48F-1D18A9856A87","first_name":"Jan","last_name":"Reininghaus","full_name":"Reininghaus, Jan"},{"first_name":"Wieland","full_name":"Reich, Wieland","last_name":"Reich"},{"full_name":"Scheuermann, Gerik","last_name":"Scheuermann","first_name":"Gerik"}],"doi":"10.1007/978-3-319-04099-8_4","publication_status":"published","abstract":[{"lang":"eng","text":"Saddle periodic orbits are an essential and stable part of the topological skeleton of a 3D vector field. Nevertheless, there is currently no efficient algorithm to robustly extract these features. In this chapter, we present a novel technique to extract saddle periodic orbits. Exploiting the analytic properties of such an orbit, we propose a scalar measure based on the finite-time Lyapunov exponent (FTLE) that indicates its presence. Using persistent homology, we can then extract the robust cycles of this field. These cycles thereby represent the saddle periodic orbits of the given vector field. We discuss the different existing FTLE approximation schemes regarding their applicability to this specific problem and propose an adapted version of FTLE called Normalized Velocity Separation. Finally, we evaluate our method using simple analytic vector field data."}],"publication":"Topological Methods in Data Analysis and Visualization III ","oa_version":"None","publication_identifier":{"isbn":["9783319040981"],"eisbn":["9783319040998"],"eissn":["2197-666X"],"issn":["1612-3786"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"Springer","date_created":"2022-03-21T07:11:23Z","series_title":"Mathematics and Visualization","place":"Cham","status":"public","page":"55-69","title":"Toward the extraction of saddle periodic orbits","volume":1,"date_published":"2014-03-19T00:00:00Z","_id":"10893","editor":[{"last_name":"Bremer","full_name":"Bremer, Peer-Timo","first_name":"Peer-Timo"},{"first_name":"Ingrid","last_name":"Hotz","full_name":"Hotz, Ingrid"},{"full_name":"Pascucci, Valerio","last_name":"Pascucci","first_name":"Valerio"},{"last_name":"Peikert","full_name":"Peikert, Ronald","first_name":"Ronald"}],"date_updated":"2025-04-15T08:37:54Z","language":[{"iso":"eng"}],"quality_controlled":"1","year":"2014","month":"03"},{"status":"public","page":"137-143","volume":8592,"title":"PHAT – Persistent Homology Algorithms Toolbox","_id":"10894","date_published":"2014-09-01T00:00:00Z","quality_controlled":"1","date_updated":"2026-06-18T17:35:15Z","language":[{"iso":"eng"}],"year":"2014","conference":{"end_date":"2014-08-09","name":"ICMS: International Congress on Mathematical Software","start_date":"2014-08-05","location":"Seoul, South Korea"},"month":"09","related_material":{"record":[{"relation":"later_version","id":"1433","status":"public"}]},"intvolume":"      8592","day":"01","citation":{"ista":"Bauer U, Kerber M, Reininghaus J, Wagner H. 2014. PHAT – Persistent Homology Algorithms Toolbox. ICMS 2014: International Congress on Mathematical Software. ICMS: International Congress on Mathematical SoftwareLNCS vol. 8592, 137–143.","apa":"Bauer, U., Kerber, M., Reininghaus, J., &#38; Wagner, H. (2014). PHAT – Persistent Homology Algorithms Toolbox. In <i>ICMS 2014: International Congress on Mathematical Software</i> (Vol. 8592, pp. 137–143). Berlin, Heidelberg: Springer Berlin Heidelberg. <a href=\"https://doi.org/10.1007/978-3-662-44199-2_24\">https://doi.org/10.1007/978-3-662-44199-2_24</a>","mla":"Bauer, Ulrich, et al. “PHAT – Persistent Homology Algorithms Toolbox.” <i>ICMS 2014: International Congress on Mathematical Software</i>, vol. 8592, Springer Berlin Heidelberg, 2014, pp. 137–43, doi:<a href=\"https://doi.org/10.1007/978-3-662-44199-2_24\">10.1007/978-3-662-44199-2_24</a>.","ieee":"U. Bauer, M. Kerber, J. Reininghaus, and H. Wagner, “PHAT – Persistent Homology Algorithms Toolbox,” in <i>ICMS 2014: International Congress on Mathematical Software</i>, Seoul, South Korea, 2014, vol. 8592, pp. 137–143.","ama":"Bauer U, Kerber M, Reininghaus J, Wagner H. PHAT – Persistent Homology Algorithms Toolbox. In: <i>ICMS 2014: International Congress on Mathematical Software</i>. Vol 8592. LNCS. Berlin, Heidelberg: Springer Berlin Heidelberg; 2014:137-143. doi:<a href=\"https://doi.org/10.1007/978-3-662-44199-2_24\">10.1007/978-3-662-44199-2_24</a>","short":"U. Bauer, M. Kerber, J. Reininghaus, H. Wagner, in:, ICMS 2014: International Congress on Mathematical Software, Springer Berlin Heidelberg, Berlin, Heidelberg, 2014, pp. 137–143.","chicago":"Bauer, Ulrich, Michael Kerber, Jan Reininghaus, and Hubert Wagner. “PHAT – Persistent Homology Algorithms Toolbox.” In <i>ICMS 2014: International Congress on Mathematical Software</i>, 8592:137–43. LNCS. Berlin, Heidelberg: Springer Berlin Heidelberg, 2014. <a href=\"https://doi.org/10.1007/978-3-662-44199-2_24\">https://doi.org/10.1007/978-3-662-44199-2_24</a>."},"type":"conference","article_processing_charge":"No","department":[{"_id":"HeEd"}],"author":[{"orcid":"0000-0002-9683-0724","id":"2ADD483A-F248-11E8-B48F-1D18A9856A87","first_name":"Ulrich","last_name":"Bauer","full_name":"Bauer, Ulrich"},{"first_name":"Michael","last_name":"Kerber","full_name":"Kerber, Michael"},{"first_name":"Jan","id":"4505473A-F248-11E8-B48F-1D18A9856A87","last_name":"Reininghaus","full_name":"Reininghaus, Jan"},{"last_name":"Wagner","full_name":"Wagner, Hubert","first_name":"Hubert"}],"scopus_import":"1","publication":"ICMS 2014: International Congress on Mathematical Software","abstract":[{"lang":"eng","text":"PHAT is a C++ library for the computation of persistent homology by matrix reduction. We aim for a simple generic design that decouples algorithms from data structures without sacrificing efficiency or user-friendliness. This makes PHAT a versatile platform for experimenting with algorithmic ideas and comparing them to state of the art implementations."}],"publication_status":"published","doi":"10.1007/978-3-662-44199-2_24","oa_version":"None","publication_identifier":{"eisbn":["9783662441992"],"eissn":["1611-3349"],"isbn":["9783662441985"],"issn":["0302-9743"]},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","place":"Berlin, Heidelberg","series_title":"LNCS","date_created":"2022-03-21T07:12:16Z","publisher":"Springer Berlin Heidelberg"},{"month":"02","year":"2014","language":[{"iso":"eng"}],"date_updated":"2024-10-14T11:23:12Z","quality_controlled":"1","date_published":"2014-02-27T00:00:00Z","_id":"11080","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1016/j.cell.2014.02.004"}],"title":"Nuclear pores set the speed limit for mitosis","volume":156,"page":"868-869","status":"public","publisher":"Elsevier","article_type":"original","date_created":"2022-04-07T07:50:04Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_identifier":{"issn":["0092-8674"]},"oa_version":"Published Version","pmid":1,"extern":"1","doi":"10.1016/j.cell.2014.02.004","publication_status":"published","abstract":[{"lang":"eng","text":"The spindle assembly checkpoint prevents separation of sister chromatids until each kinetochore is attached to the mitotic spindle. Rodriguez-Bravo et al. report that the nuclear pore complex scaffolds spindle assembly checkpoint signaling in interphase, providing a store of inhibitory signals that limits the speed of the subsequent mitosis."}],"publication":"Cell","external_id":{"pmid":["24581486"]},"scopus_import":"1","author":[{"last_name":"Buchwalter","full_name":"Buchwalter, Abigail","first_name":"Abigail"},{"first_name":"Martin W","id":"86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed","orcid":"0000-0002-2111-992X","full_name":"HETZER, Martin W","last_name":"HETZER"}],"issue":"5","oa":1,"type":"journal_article","article_processing_charge":"No","citation":{"ieee":"A. Buchwalter and M. Hetzer, “Nuclear pores set the speed limit for mitosis,” <i>Cell</i>, vol. 156, no. 5. Elsevier, pp. 868–869, 2014.","apa":"Buchwalter, A., &#38; Hetzer, M. (2014). Nuclear pores set the speed limit for mitosis. <i>Cell</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.cell.2014.02.004\">https://doi.org/10.1016/j.cell.2014.02.004</a>","ista":"Buchwalter A, Hetzer M. 2014. Nuclear pores set the speed limit for mitosis. Cell. 156(5), 868–869.","mla":"Buchwalter, Abigail, and Martin Hetzer. “Nuclear Pores Set the Speed Limit for Mitosis.” <i>Cell</i>, vol. 156, no. 5, Elsevier, 2014, pp. 868–69, doi:<a href=\"https://doi.org/10.1016/j.cell.2014.02.004\">10.1016/j.cell.2014.02.004</a>.","chicago":"Buchwalter, Abigail, and Martin Hetzer. “Nuclear Pores Set the Speed Limit for Mitosis.” <i>Cell</i>. Elsevier, 2014. <a href=\"https://doi.org/10.1016/j.cell.2014.02.004\">https://doi.org/10.1016/j.cell.2014.02.004</a>.","short":"A. Buchwalter, M. Hetzer, Cell 156 (2014) 868–869.","ama":"Buchwalter A, Hetzer M. Nuclear pores set the speed limit for mitosis. <i>Cell</i>. 2014;156(5):868-869. doi:<a href=\"https://doi.org/10.1016/j.cell.2014.02.004\">10.1016/j.cell.2014.02.004</a>"},"keyword":["General Biochemistry","Genetics and Molecular Biology"],"day":"27","intvolume":"       156"},{"volume":205,"title":"Breaching the nuclear envelope in development and disease","page":"133-141","status":"public","month":"04","year":"2014","quality_controlled":"1","date_updated":"2024-10-14T11:23:23Z","language":[{"iso":"eng"}],"_id":"11081","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1083/jcb.201402003"}],"date_published":"2014-04-21T00:00:00Z","author":[{"full_name":"Hatch, Emily","last_name":"Hatch","first_name":"Emily"},{"id":"86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed","orcid":"0000-0002-2111-992X","first_name":"Martin W","full_name":"HETZER, Martin W","last_name":"HETZER"}],"scopus_import":"1","external_id":{"pmid":["24751535"]},"issue":"2","citation":{"short":"E. Hatch, M. Hetzer, Journal of Cell Biology 205 (2014) 133–141.","ama":"Hatch E, Hetzer M. Breaching the nuclear envelope in development and disease. <i>Journal of Cell Biology</i>. 2014;205(2):133-141. doi:<a href=\"https://doi.org/10.1083/jcb.201402003\">10.1083/jcb.201402003</a>","chicago":"Hatch, Emily, and Martin Hetzer. “Breaching the Nuclear Envelope in Development and Disease.” <i>Journal of Cell Biology</i>. Rockefeller University Press, 2014. <a href=\"https://doi.org/10.1083/jcb.201402003\">https://doi.org/10.1083/jcb.201402003</a>.","mla":"Hatch, Emily, and Martin Hetzer. “Breaching the Nuclear Envelope in Development and Disease.” <i>Journal of Cell Biology</i>, vol. 205, no. 2, Rockefeller University Press, 2014, pp. 133–41, doi:<a href=\"https://doi.org/10.1083/jcb.201402003\">10.1083/jcb.201402003</a>.","apa":"Hatch, E., &#38; Hetzer, M. (2014). Breaching the nuclear envelope in development and disease. <i>Journal of Cell Biology</i>. Rockefeller University Press. <a href=\"https://doi.org/10.1083/jcb.201402003\">https://doi.org/10.1083/jcb.201402003</a>","ista":"Hatch E, Hetzer M. 2014. Breaching the nuclear envelope in development and disease. Journal of Cell Biology. 205(2), 133–141.","ieee":"E. Hatch and M. Hetzer, “Breaching the nuclear envelope in development and disease,” <i>Journal of Cell Biology</i>, vol. 205, no. 2. Rockefeller University Press, pp. 133–141, 2014."},"type":"journal_article","article_processing_charge":"No","oa":1,"intvolume":"       205","day":"21","keyword":["Cell Biology"],"date_created":"2022-04-07T07:50:13Z","article_type":"review","publisher":"Rockefeller University Press","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_identifier":{"issn":["1540-8140","0021-9525"]},"oa_version":"Published Version","pmid":1,"abstract":[{"text":"In eukaryotic cells the nuclear genome is enclosed by the nuclear envelope (NE). In metazoans, the NE breaks down in mitosis and it has been assumed that the physical barrier separating nucleoplasm and cytoplasm remains intact during the rest of the cell cycle and cell differentiation. However, recent studies suggest that nonmitotic NE remodeling plays a critical role in development, virus infection, laminopathies, and cancer. Although the mechanisms underlying these NE restructuring events are currently being defined, one common theme is activation of protein kinase C family members in the interphase nucleus to disrupt the nuclear lamina, demonstrating the importance of the lamina in maintaining nuclear integrity.","lang":"eng"}],"publication":"Journal of Cell Biology","publication_status":"published","doi":"10.1083/jcb.201402003","extern":"1"},{"quality_controlled":"1","date_updated":"2024-10-14T11:23:34Z","language":[{"iso":"eng"}],"date_published":"2014-08-15T00:00:00Z","main_file_link":[{"url":"https://doi.org/10.1091/mbc.e14-04-0865","open_access":"1"}],"_id":"11082","month":"08","year":"2014","page":"2472-2484","status":"public","volume":25,"title":"Nup50 is required for cell differentiation and exhibits transcription-dependent dynamics","oa_version":"Published Version","publication_identifier":{"issn":["1059-1524","1939-4586"]},"publication_status":"published","publication":"Molecular Biology of the Cell","abstract":[{"text":"The nuclear pore complex (NPC) plays a critical role in gene expression by mediating import of transcription regulators into the nucleus and export of RNA transcripts to the cytoplasm. Emerging evidence suggests that in addition to mediating transport, a subset of nucleoporins (Nups) engage in transcriptional activation and elongation at genomic loci that are not associated with NPCs. The underlying mechanism and regulation of Nup mobility on and off nuclear pores remain unclear. Here we show that Nup50 is a mobile Nup with a pronounced presence both at the NPC and in the nucleoplasm that can move between these different localizations. Strikingly, the dynamic behavior of Nup50 in both locations is dependent on active transcription by RNA polymerase II and requires the N-terminal half of the protein, which contains importin α– and Nup153-binding domains. However, Nup50 dynamics are independent of importin α, Nup153, and Nup98, even though the latter two proteins also exhibit transcription-dependent mobility. Of interest, depletion of Nup50 from C2C12 myoblasts does not affect cell proliferation but inhibits differentiation into myotubes. Taken together, our results suggest a transport-independent role for Nup50 in chromatin biology that occurs away from the NPC.","lang":"eng"}],"doi":"10.1091/mbc.e14-04-0865","extern":"1","date_created":"2022-04-07T07:50:24Z","article_type":"original","publisher":"American Society for Cell Biology","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"ieee":"A. L. Buchwalter, Y. Liang, and M. Hetzer, “Nup50 is required for cell differentiation and exhibits transcription-dependent dynamics,” <i>Molecular Biology of the Cell</i>, vol. 25, no. 16. American Society for Cell Biology, pp. 2472–2484, 2014.","mla":"Buchwalter, Abigail L., et al. “Nup50 Is Required for Cell Differentiation and Exhibits Transcription-Dependent Dynamics.” <i>Molecular Biology of the Cell</i>, vol. 25, no. 16, American Society for Cell Biology, 2014, pp. 2472–84, doi:<a href=\"https://doi.org/10.1091/mbc.e14-04-0865\">10.1091/mbc.e14-04-0865</a>.","apa":"Buchwalter, A. L., Liang, Y., &#38; Hetzer, M. (2014). Nup50 is required for cell differentiation and exhibits transcription-dependent dynamics. <i>Molecular Biology of the Cell</i>. American Society for Cell Biology. <a href=\"https://doi.org/10.1091/mbc.e14-04-0865\">https://doi.org/10.1091/mbc.e14-04-0865</a>","ista":"Buchwalter AL, Liang Y, Hetzer M. 2014. Nup50 is required for cell differentiation and exhibits transcription-dependent dynamics. Molecular Biology of the Cell. 25(16), 2472–2484.","chicago":"Buchwalter, Abigail L., Yun Liang, and Martin Hetzer. “Nup50 Is Required for Cell Differentiation and Exhibits Transcription-Dependent Dynamics.” <i>Molecular Biology of the Cell</i>. American Society for Cell Biology, 2014. <a href=\"https://doi.org/10.1091/mbc.e14-04-0865\">https://doi.org/10.1091/mbc.e14-04-0865</a>.","short":"A.L. Buchwalter, Y. Liang, M. Hetzer, Molecular Biology of the Cell 25 (2014) 2472–2484.","ama":"Buchwalter AL, Liang Y, Hetzer M. Nup50 is required for cell differentiation and exhibits transcription-dependent dynamics. <i>Molecular Biology of the Cell</i>. 2014;25(16):2472-2484. doi:<a href=\"https://doi.org/10.1091/mbc.e14-04-0865\">10.1091/mbc.e14-04-0865</a>"},"oa":1,"type":"journal_article","article_processing_charge":"No","intvolume":"        25","keyword":["Cell Biology","Molecular Biology"],"day":"15","author":[{"last_name":"Buchwalter","full_name":"Buchwalter, Abigail L.","first_name":"Abigail L."},{"full_name":"Liang, Yun","last_name":"Liang","first_name":"Yun"},{"last_name":"HETZER","full_name":"HETZER, Martin W","first_name":"Martin W","id":"86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed","orcid":"0000-0002-2111-992X"}],"scopus_import":"1","issue":"16"},{"title":"A relationship between specific star formation rate and metallicity gradient within z ∼ 1 galaxies from KMOS-HiZELS","volume":443,"status":"public","arxiv":1,"page":"2695-2704","year":"2014","month":"09","_id":"11582","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1407.1047"}],"date_published":"2014-09-21T00:00:00Z","language":[{"iso":"eng"}],"date_updated":"2022-08-19T08:27:25Z","quality_controlled":"1","acknowledgement":"First, we acknowledge the referee for their comments, which have improved the clarity of this paper. JPS and IRS acknowledge support from STFC (ST/I001573/1). IRS also acknowledges support from the ERC Advanced Investigator programme DUSTYGAL and a Royal Society/Wolfson Merit Award. DS acknowledges financial support from NWO through a Veni fellowship and from FCT through the award of an FCT-IF starting grant. PNB acknowledges STFC for financial support.","issue":"3","scopus_import":"1","external_id":{"arxiv":["1407.1047"]},"author":[{"first_name":"John P.","full_name":"Stott, John P.","last_name":"Stott"},{"full_name":"Sobral, David","last_name":"Sobral","first_name":"David"},{"last_name":"Swinbank","full_name":"Swinbank, A. M.","first_name":"A. M."},{"first_name":"Ian","last_name":"Smail","full_name":"Smail, Ian"},{"first_name":"Richard","last_name":"Bower","full_name":"Bower, Richard"},{"last_name":"Best","full_name":"Best, Philip N.","first_name":"Philip N."},{"first_name":"Ray M.","full_name":"Sharples, Ray M.","last_name":"Sharples"},{"full_name":"Geach, James E.","last_name":"Geach","first_name":"James E."},{"full_name":"Matthee, Jorryt J","last_name":"Matthee","first_name":"Jorryt J","id":"7439a258-f3c0-11ec-9501-9df22fe06720","orcid":"0000-0003-2871-127X"}],"day":"21","keyword":["Space and Planetary Science","Astronomy and Astrophysics","galaxies: abundances","galaxies: evolution","galaxies: kinematics and dynamics"],"intvolume":"       443","article_processing_charge":"No","type":"journal_article","oa":1,"citation":{"chicago":"Stott, John P., David Sobral, A. M. Swinbank, Ian Smail, Richard Bower, Philip N. Best, Ray M. Sharples, James E. Geach, and Jorryt J Matthee. “A Relationship between Specific Star Formation Rate and Metallicity Gradient within z ∼ 1 Galaxies from KMOS-HiZELS.” <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press, 2014. <a href=\"https://doi.org/10.1093/mnras/stu1343\">https://doi.org/10.1093/mnras/stu1343</a>.","short":"J.P. Stott, D. Sobral, A.M. Swinbank, I. Smail, R. Bower, P.N. Best, R.M. Sharples, J.E. Geach, J.J. Matthee, Monthly Notices of the Royal Astronomical Society 443 (2014) 2695–2704.","ama":"Stott JP, Sobral D, Swinbank AM, et al. A relationship between specific star formation rate and metallicity gradient within z ∼ 1 galaxies from KMOS-HiZELS. <i>Monthly Notices of the Royal Astronomical Society</i>. 2014;443(3):2695-2704. doi:<a href=\"https://doi.org/10.1093/mnras/stu1343\">10.1093/mnras/stu1343</a>","ieee":"J. P. Stott <i>et al.</i>, “A relationship between specific star formation rate and metallicity gradient within z ∼ 1 galaxies from KMOS-HiZELS,” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 443, no. 3. Oxford University Press, pp. 2695–2704, 2014.","mla":"Stott, John P., et al. “A Relationship between Specific Star Formation Rate and Metallicity Gradient within z ∼ 1 Galaxies from KMOS-HiZELS.” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 443, no. 3, Oxford University Press, 2014, pp. 2695–704, doi:<a href=\"https://doi.org/10.1093/mnras/stu1343\">10.1093/mnras/stu1343</a>.","apa":"Stott, J. P., Sobral, D., Swinbank, A. M., Smail, I., Bower, R., Best, P. N., … Matthee, J. J. (2014). A relationship between specific star formation rate and metallicity gradient within z ∼ 1 galaxies from KMOS-HiZELS. <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/mnras/stu1343\">https://doi.org/10.1093/mnras/stu1343</a>","ista":"Stott JP, Sobral D, Swinbank AM, Smail I, Bower R, Best PN, Sharples RM, Geach JE, Matthee JJ. 2014. A relationship between specific star formation rate and metallicity gradient within z ∼ 1 galaxies from KMOS-HiZELS. Monthly Notices of the Royal Astronomical Society. 443(3), 2695–2704."},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publisher":"Oxford University Press","article_type":"original","date_created":"2022-07-14T12:16:10Z","extern":"1","doi":"10.1093/mnras/stu1343","publication":"Monthly Notices of the Royal Astronomical Society","abstract":[{"text":"We have observed a sample of typical z ∼ 1 star-forming galaxies, selected from the HiZELS survey, with the new K-band Multi-Object Spectrograph (KMOS) near-infrared, multi-integral field unit instrument on the Very Large Telescope (VLT), in order to obtain their dynamics and metallicity gradients. The majority of our galaxies have a metallicity gradient consistent with being flat or negative (i.e. higher metallicity cores than outskirts). Intriguingly, we find a trend between metallicity gradient and specific star formation rate (sSFR), such that galaxies with a high sSFR tend to have relatively metal poor centres, a result which is strengthened when combined with data sets from the literature. This result appears to explain the discrepancies reported between different high-redshift studies and varying claims for evolution. From a galaxy evolution perspective, the trend we see would mean that a galaxy's sSFR is governed by the amount of metal-poor gas that can be funnelled into its core, triggered either by merging or through efficient accretion. In fact, merging may play a significant role as it is the starburst galaxies at all epochs, which have the more positive metallicity gradients. Our results may help to explain the origin of the fundamental metallicity relation, in which galaxies at a fixed mass are observed to have lower metallicities at higher star formation rates, especially if the metallicity is measured in an aperture encompassing only the central regions of the galaxy. Finally, we note that this study demonstrates the power of KMOS as an efficient instrument for large-scale resolved galaxy surveys.","lang":"eng"}],"publication_status":"published","oa_version":"Preprint","publication_identifier":{"eissn":["1365-2966"],"issn":["0035-8711"]}},{"intvolume":"       440","keyword":["Space and Planetary Science","Astronomy and Astrophysics","galaxies: evolution","galaxies: high-redshift","cosmology: observations","dark ages","reionization","first stars"],"day":"21","citation":{"ieee":"J. J. Matthee <i>et al.</i>, “A 10 deg2 Lyman α survey at z=8.8 with spectroscopic follow-up: Strong constraints on the luminosity function and implications for other surveys,” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 440, no. 3. Oxford University Press, pp. 2375–2387, 2014.","mla":"Matthee, Jorryt J., et al. “A 10 Deg2 Lyman α Survey at Z=8.8 with Spectroscopic Follow-up: Strong Constraints on the Luminosity Function and Implications for Other Surveys.” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 440, no. 3, Oxford University Press, 2014, pp. 2375–87, doi:<a href=\"https://doi.org/10.1093/mnras/stu392\">10.1093/mnras/stu392</a>.","ista":"Matthee JJ, Sobral D, Swinbank AM, Smail I, Best PN, Kim J-W, Franx M, Milvang-Jensen B, Fynbo J. 2014. A 10 deg2 Lyman α survey at z=8.8 with spectroscopic follow-up: Strong constraints on the luminosity function and implications for other surveys. Monthly Notices of the Royal Astronomical Society. 440(3), 2375–2387.","apa":"Matthee, J. J., Sobral, D., Swinbank, A. M., Smail, I., Best, P. N., Kim, J.-W., … Fynbo, J. (2014). A 10 deg2 Lyman α survey at z=8.8 with spectroscopic follow-up: Strong constraints on the luminosity function and implications for other surveys. <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/mnras/stu392\">https://doi.org/10.1093/mnras/stu392</a>","chicago":"Matthee, Jorryt J, David Sobral, A. M. Swinbank, Ian Smail, P. N. Best, Jae-Woo Kim, Marijn Franx, Bo Milvang-Jensen, and Johan Fynbo. “A 10 Deg2 Lyman α Survey at Z=8.8 with Spectroscopic Follow-up: Strong Constraints on the Luminosity Function and Implications for Other Surveys.” <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford University Press, 2014. <a href=\"https://doi.org/10.1093/mnras/stu392\">https://doi.org/10.1093/mnras/stu392</a>.","short":"J.J. Matthee, D. Sobral, A.M. Swinbank, I. Smail, P.N. Best, J.-W. Kim, M. Franx, B. Milvang-Jensen, J. Fynbo, Monthly Notices of the Royal Astronomical Society 440 (2014) 2375–2387.","ama":"Matthee JJ, Sobral D, Swinbank AM, et al. A 10 deg2 Lyman α survey at z=8.8 with spectroscopic follow-up: Strong constraints on the luminosity function and implications for other surveys. <i>Monthly Notices of the Royal Astronomical Society</i>. 2014;440(3):2375-2387. doi:<a href=\"https://doi.org/10.1093/mnras/stu392\">10.1093/mnras/stu392</a>"},"oa":1,"article_processing_charge":"No","type":"journal_article","issue":"3","acknowledgement":"We thank the anonymous referee for the comments and suggestions which improved both the quality and clarity of this work. DS acknowledges financial support from the Netherlands Organisation for Scientific Research (NWO) through a Veni fellowship. IRS acknowledges support from STFC (ST/I001573/1), a Leverhulme Fellowship, the ERC Advanced Investigator programme DUSTYGAL 321334 and a Royal Society/Wolfson Merit Award. PNB acknowledges support from the Leverhulme Trust. JWK acknowledges the support from the Creative Research Initiative Program, no. 2008- 0060544, of the National Research Foundation of Korea (NRF) funded by the Korean government (MSIP). JPUF and BMJ acknowledge support from the ERC-StG grant EGGS-278202. The Dark Cosmology Centre is funded by the Danish National Research Foundation. This work is based in part on data obtained as part of the UKIRT Infrared Deep Sky Survey. Based on observations obtained with MegaPrime/MegaCam, a joint project of CFHT and CEA/IRFU, at the Canada–France–Hawaii Telescope (CFHT) which is operated by the National Research Council (NRC) of Canada, the Institut National des Science de l’Univers of the Centre National de la Recherche Scientifique (CNRS) of France and the University of Hawaii. This work is based in part on data products produced at Terapix available at the Canadian Astronomy Data Centre as part of the Canada-France-Hawaii Telescope Legacy Survey, a collaborative project of NRC and CNRS. This work was only possible due to OPTICON/FP7 and the access that it granted to the CFHT telescope. The authors also wish to acknowledge the CFHTLS and UKIDSS surveys for their excellent legacy and complementary value – without such high-quality data sets, this research would not have been possible.","author":[{"full_name":"Matthee, Jorryt J","last_name":"Matthee","id":"7439a258-f3c0-11ec-9501-9df22fe06720","orcid":"0000-0003-2871-127X","first_name":"Jorryt J"},{"first_name":"David","full_name":"Sobral, David","last_name":"Sobral"},{"first_name":"A. M.","last_name":"Swinbank","full_name":"Swinbank, A. M."},{"full_name":"Smail, Ian","last_name":"Smail","first_name":"Ian"},{"last_name":"Best","full_name":"Best, P. N.","first_name":"P. N."},{"last_name":"Kim","full_name":"Kim, Jae-Woo","first_name":"Jae-Woo"},{"first_name":"Marijn","last_name":"Franx","full_name":"Franx, Marijn"},{"first_name":"Bo","last_name":"Milvang-Jensen","full_name":"Milvang-Jensen, Bo"},{"full_name":"Fynbo, Johan","last_name":"Fynbo","first_name":"Johan"}],"external_id":{"arxiv":["1402.6697"]},"scopus_import":"1","publication_status":"published","abstract":[{"lang":"eng","text":"Candidate galaxies at redshifts of z ∼ 10 are now being found in extremely deep surveys, probing very small areas. As a consequence, candidates are very faint, making spectroscopic confirmation practically impossible. In order to overcome such limitations, we have undertaken the CF-HiZELS survey, which is a large-area, medium-depth near-infrared narrow-band survey targeted at z = 8.8 Lyman α (Lyα) emitters (LAEs) and covering 10 deg2 in part of the SSA22 field with the Canada–France–Hawaii Telescope (CFHT). We surveyed a comoving volume of 4.7 × 106 Mpc3 to a Lyα luminosity limit of 6.3 × 1043舁erg舁s−1. We look for Lyα candidates by applying the following criteria: (i) clear emission-line source, (ii) no optical detections (ugriz from CFHTLS), (iii) no visible detection in the optical stack (ugriz > 27), (iv) visually checked reliable NBJ and J detections and (v) J − K ≤ 0. We compute photometric redshifts and remove a significant amount of dusty lower redshift line-emitters at z ∼ 1.4 or 2.2. A total of 13 Lyα candidates were found, of which two are marked as strong candidates, but the majority have very weak constraints on their spectral energy distributions. Using follow-up observations with SINFONI/VLT, we are able to exclude the most robust candidates as LAEs. We put a strong constraint on the Lyα luminosity function at z ∼ 9 and make realistic predictions for ongoing and future surveys. Our results show that surveys for the highest redshift LAEs are susceptible of multiple contaminations and that spectroscopic follow-up is absolutely necessary."}],"publication":"Monthly Notices of the Royal Astronomical Society","doi":"10.1093/mnras/stu392","extern":"1","publication_identifier":{"issn":["0035-8711"],"eissn":["1365-2966"]},"oa_version":"Preprint","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2022-07-14T12:33:24Z","publisher":"Oxford University Press","article_type":"original","status":"public","page":"2375-2387","arxiv":1,"volume":440,"title":"A 10 deg2 Lyman α survey at z=8.8 with spectroscopic follow-up: Strong constraints on the luminosity function and implications for other surveys","date_published":"2014-05-21T00:00:00Z","main_file_link":[{"url":"https://arxiv.org/abs/1402.6697","open_access":"1"}],"_id":"11583","quality_controlled":"1","language":[{"iso":"eng"}],"date_updated":"2024-10-14T11:37:28Z","year":"2014","month":"05"}]
