[{"author":[{"first_name":"Ji-Woong","full_name":"Lee, Ji-Woong","last_name":"Lee"},{"last_name":"Klajn","first_name":"Rafal","full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b"}],"article_type":"original","fulldoi":"https://doi.org/10.1039/c4cc08541h","abstract":[{"lang":"eng","text":"Metallic nanoparticles co-functionalised with monolayers of UV- and CO2-sensitive ligands were prepared and shown to respond to these two types of stimuli reversibly and in an orthogonal fashion. The composition of the coating could be tailored to yield nanoparticles capable of aggregating exclusively when both UV and CO2 were applied at the same time, analogously to the behaviour of an AND logic gate."}],"day":"18","keyword":["Materials Chemistry","Metals and Alloys","Surfaces","Coatings and Films","General Chemistry","Ceramics and Composites","Electronic","Optical and Magnetic Materials","Catalysis"],"publication_status":"published","type":"journal_article","publication":"Chemical Communications","volume":51,"issue":"11","citation":{"chicago":"Lee, Ji-Woong, and Rafal Klajn. “Dual-Responsive Nanoparticles That Aggregate under the Simultaneous Action of Light and CO2.” <i>Chemical Communications</i>. Royal Society of Chemistry, 2015. <a href=\"https://doi.org/10.1039/c4cc08541h\">https://doi.org/10.1039/c4cc08541h</a>.","ista":"Lee J-W, Klajn R. 2015. Dual-responsive nanoparticles that aggregate under the simultaneous action of light and CO2. Chemical Communications. 51(11), 2036–2039.","short":"J.-W. Lee, R. Klajn, Chemical Communications 51 (2015) 2036–2039.","ama":"Lee J-W, Klajn R. Dual-responsive nanoparticles that aggregate under the simultaneous action of light and CO2. <i>Chemical Communications</i>. 2015;51(11):2036-2039. doi:<a href=\"https://doi.org/10.1039/c4cc08541h\">10.1039/c4cc08541h</a>","mla":"Lee, Ji-Woong, and Rafal Klajn. “Dual-Responsive Nanoparticles That Aggregate under the Simultaneous Action of Light and CO2.” <i>Chemical Communications</i>, vol. 51, no. 11, Royal Society of Chemistry, 2015, pp. 2036–39, doi:<a href=\"https://doi.org/10.1039/c4cc08541h\">10.1039/c4cc08541h</a>.","ieee":"J.-W. Lee and R. Klajn, “Dual-responsive nanoparticles that aggregate under the simultaneous action of light and CO2,” <i>Chemical Communications</i>, vol. 51, no. 11. Royal Society of Chemistry, pp. 2036–2039, 2015.","apa":"Lee, J.-W., &#38; Klajn, R. (2015). Dual-responsive nanoparticles that aggregate under the simultaneous action of light and CO2. <i>Chemical Communications</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/c4cc08541h\">https://doi.org/10.1039/c4cc08541h</a>"},"intvolume":"        51","date_updated":"2024-10-14T12:17:58Z","doi":"10.1039/c4cc08541h","scopus_import":"1","publisher":"Royal Society of Chemistry","pmid":1,"oa":1,"date_created":"2023-08-01T09:44:48Z","date_published":"2015-11-18T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","title":"Dual-responsive nanoparticles that aggregate under the simultaneous action of light and CO2","oa_version":"Published Version","external_id":{"pmid":["25417754"]},"page":"2036-2039","main_file_link":[{"url":"https://doi.org/10.1039/C4CC08541H","open_access":"1"}],"year":"2015","status":"public","quality_controlled":"1","_id":"13395","extern":"1","language":[{"iso":"eng"}],"publication_identifier":{"issn":["1359-7345"],"eissn":["1364-548X"]},"month":"11"},{"scopus_import":"1","publisher":"American Chemical Society","pmid":1,"intvolume":"        31","date_updated":"2024-10-14T12:18:08Z","doi":"10.1021/la504291n","citation":{"chicago":"Moldt, Thomas, Daniel Brete, Daniel Przyrembel, Sanjib Das, Joel R. Goldman, Pintu K. Kundu, Cornelius Gahl, Rafal Klajn, and Martin Weinelt. “Tailoring the Properties of Surface-Immobilized Azobenzenes by Monolayer Dilution and Surface Curvature.” <i>Langmuir</i>. American Chemical Society, 2015. <a href=\"https://doi.org/10.1021/la504291n\">https://doi.org/10.1021/la504291n</a>.","ista":"Moldt T, Brete D, Przyrembel D, Das S, Goldman JR, Kundu PK, Gahl C, Klajn R, Weinelt M. 2015. Tailoring the properties of surface-immobilized azobenzenes by monolayer dilution and surface curvature. Langmuir. 31(3), 1048–1057.","short":"T. Moldt, D. Brete, D. Przyrembel, S. Das, J.R. Goldman, P.K. Kundu, C. Gahl, R. Klajn, M. Weinelt, Langmuir 31 (2015) 1048–1057.","ama":"Moldt T, Brete D, Przyrembel D, et al. Tailoring the properties of surface-immobilized azobenzenes by monolayer dilution and surface curvature. <i>Langmuir</i>. 2015;31(3):1048-1057. doi:<a href=\"https://doi.org/10.1021/la504291n\">10.1021/la504291n</a>","mla":"Moldt, Thomas, et al. “Tailoring the Properties of Surface-Immobilized Azobenzenes by Monolayer Dilution and Surface Curvature.” <i>Langmuir</i>, vol. 31, no. 3, American Chemical Society, 2015, pp. 1048–57, doi:<a href=\"https://doi.org/10.1021/la504291n\">10.1021/la504291n</a>.","ieee":"T. Moldt <i>et al.</i>, “Tailoring the properties of surface-immobilized azobenzenes by monolayer dilution and surface curvature,” <i>Langmuir</i>, vol. 31, no. 3. American Chemical Society, pp. 1048–1057, 2015.","apa":"Moldt, T., Brete, D., Przyrembel, D., Das, S., Goldman, J. R., Kundu, P. K., … Weinelt, M. (2015). Tailoring the properties of surface-immobilized azobenzenes by monolayer dilution and surface curvature. <i>Langmuir</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/la504291n\">https://doi.org/10.1021/la504291n</a>"},"volume":31,"publication":"Langmuir","type":"journal_article","issue":"3","publication_status":"published","day":"27","keyword":["Electrochemistry","Spectroscopy","Surfaces and Interfaces","Condensed Matter Physics","General Materials Science"],"fulldoi":"https://doi.org/10.1021/la504291n","abstract":[{"text":"Photoswitching in densely packed azobenzene self-assembled monolayers (SAMs) is strongly affected by steric constraints and excitonic coupling between neighboring chromophores. Therefore, control of the chromophore density is essential for enhancing and manipulating the photoisomerization yield. We systematically compare two methods to achieve this goal: First, we assemble monocomponent azobenzene–alkanethiolate SAMs on gold nanoparticles of varying size. Second, we form mixed SAMs of azobenzene–alkanethiolates and “dummy” alkanethiolates on planar substrates. Both methods lead to a gradual decrease of the chromophore density and enable efficient photoswitching with low-power light sources. X-ray spectroscopy reveals that coadsorption from solution yields mixtures with tunable composition. The orientation of the chromophores with respect to the surface normal changes from a tilted to an upright position with increasing azobenzene density. For both systems, optical spectroscopy reveals a pronounced excitonic shift that increases with the chromophore density. In spite of exciting the optical transition of the monomer, the main spectral change in mixed SAMs occurs in the excitonic band. In addition, the photoisomerization yield decreases only slightly by increasing the azobenzene–alkanethiolate density, and we observed photoswitching even with minor dilutions. Unlike in solution, azobenzene in the planar SAM can be switched back almost completely by optical excitation from the cis to the original trans state within a short time scale. These observations indicate cooperativity in the photoswitching process of mixed SAMs.","lang":"eng"}],"article_type":"original","author":[{"last_name":"Moldt","full_name":"Moldt, Thomas","first_name":"Thomas"},{"last_name":"Brete","first_name":"Daniel","full_name":"Brete, Daniel"},{"full_name":"Przyrembel, Daniel","first_name":"Daniel","last_name":"Przyrembel"},{"last_name":"Das","full_name":"Das, Sanjib","first_name":"Sanjib"},{"last_name":"Goldman","full_name":"Goldman, Joel R.","first_name":"Joel R."},{"last_name":"Kundu","first_name":"Pintu K.","full_name":"Kundu, Pintu K."},{"last_name":"Gahl","first_name":"Cornelius","full_name":"Gahl, Cornelius"},{"first_name":"Rafal","full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","last_name":"Klajn"},{"last_name":"Weinelt","first_name":"Martin","full_name":"Weinelt, Martin"}],"language":[{"iso":"eng"}],"publication_identifier":{"issn":["0743-7463"],"eissn":["1520-5827"]},"month":"01","extern":"1","_id":"13396","year":"2015","quality_controlled":"1","status":"public","page":"1048-1057","oa_version":"None","title":"Tailoring the properties of surface-immobilized azobenzenes by monolayer dilution and surface curvature","external_id":{"pmid":["25544061"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","date_created":"2023-08-01T09:45:02Z","date_published":"2015-01-27T00:00:00Z"},{"date_created":"2023-08-01T09:45:17Z","date_published":"2015-01-02T00:00:00Z","title":"Magnetic field-induced self-assembly of iron oxide nanocubes","oa_version":"Published Version","external_id":{"pmid":["25920522"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","status":"public","quality_controlled":"1","year":"2015","page":"403-421","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1039/C4FD00265B"}],"language":[{"iso":"eng"}],"publication_identifier":{"eissn":["1364-5498"],"issn":["1359-6640"]},"month":"01","_id":"13397","extern":"1","article_type":"original","author":[{"first_name":"Gurvinder","full_name":"Singh, Gurvinder","last_name":"Singh"},{"last_name":"Chan","full_name":"Chan, Henry","first_name":"Henry"},{"last_name":"Udayabhaskararao","first_name":"T.","full_name":"Udayabhaskararao, T."},{"last_name":"Gelman","full_name":"Gelman, Elijah","first_name":"Elijah"},{"last_name":"Peddis","first_name":"Davide","full_name":"Peddis, Davide"},{"first_name":"Artem","full_name":"Baskin, Artem","last_name":"Baskin"},{"last_name":"Leitus","full_name":"Leitus, Gregory","first_name":"Gregory"},{"last_name":"Král","full_name":"Král, Petr","first_name":"Petr"},{"last_name":"Klajn","first_name":"Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","full_name":"Klajn, Rafal"}],"day":"02","publication_status":"published","keyword":["Physical and Theoretical Chemistry"],"fulldoi":"https://doi.org/10.1039/c4fd00265b","abstract":[{"lang":"eng","text":"Self-assembly of inorganic nanoparticles has been studied extensively for particles having different sizes and compositions. However, relatively little attention has been devoted to how the shape and surface chemistry of magnetic nanoparticles affects their self-assembly properties. Here, we undertook a combined experiment–theory study aimed at better understanding of the self-assembly of cubic magnetite (Fe3O4) particles. We demonstrated that, depending on the experimental parameters, such as the direction of the magnetic field and nanoparticle density, a variety of superstructures can be obtained, including one-dimensional filaments and helices, as well as C-shaped assemblies described here for the first time. Furthermore, we functionalized the surfaces of the magnetic nanocubes with light-sensitive ligands. Using these modified nanoparticles, we were able to achieve orthogonal control of self-assembly using a magnetic field and light."}],"citation":{"ieee":"G. Singh <i>et al.</i>, “Magnetic field-induced self-assembly of iron oxide nanocubes,” <i>Faraday Discussions</i>, vol. 181. Royal Society of Chemistry, pp. 403–421, 2015.","apa":"Singh, G., Chan, H., Udayabhaskararao, T., Gelman, E., Peddis, D., Baskin, A., … Klajn, R. (2015). Magnetic field-induced self-assembly of iron oxide nanocubes. <i>Faraday Discussions</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/c4fd00265b\">https://doi.org/10.1039/c4fd00265b</a>","chicago":"Singh, Gurvinder, Henry Chan, T. Udayabhaskararao, Elijah Gelman, Davide Peddis, Artem Baskin, Gregory Leitus, Petr Král, and Rafal Klajn. “Magnetic Field-Induced Self-Assembly of Iron Oxide Nanocubes.” <i>Faraday Discussions</i>. Royal Society of Chemistry, 2015. <a href=\"https://doi.org/10.1039/c4fd00265b\">https://doi.org/10.1039/c4fd00265b</a>.","ista":"Singh G, Chan H, Udayabhaskararao T, Gelman E, Peddis D, Baskin A, Leitus G, Král P, Klajn R. 2015. Magnetic field-induced self-assembly of iron oxide nanocubes. Faraday Discussions. 181, 403–421.","short":"G. Singh, H. Chan, T. Udayabhaskararao, E. Gelman, D. Peddis, A. Baskin, G. Leitus, P. Král, R. Klajn, Faraday Discussions 181 (2015) 403–421.","mla":"Singh, Gurvinder, et al. “Magnetic Field-Induced Self-Assembly of Iron Oxide Nanocubes.” <i>Faraday Discussions</i>, vol. 181, Royal Society of Chemistry, 2015, pp. 403–21, doi:<a href=\"https://doi.org/10.1039/c4fd00265b\">10.1039/c4fd00265b</a>.","ama":"Singh G, Chan H, Udayabhaskararao T, et al. Magnetic field-induced self-assembly of iron oxide nanocubes. <i>Faraday Discussions</i>. 2015;181:403-421. doi:<a href=\"https://doi.org/10.1039/c4fd00265b\">10.1039/c4fd00265b</a>"},"type":"journal_article","publication":"Faraday Discussions","volume":181,"scopus_import":"1","publisher":"Royal Society of Chemistry","pmid":1,"oa":1,"intvolume":"       181","date_updated":"2024-10-14T12:18:19Z","doi":"10.1039/c4fd00265b"},{"external_id":{"pmid":["26149295"]},"oa_version":"None","title":"Field-assisted self-assembly process: General discussion","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2015-07-07T00:00:00Z","date_created":"2023-08-01T09:45:29Z","month":"07","language":[{"iso":"eng"}],"publication_identifier":{"eissn":["1364-5498"],"issn":["1359-6640"]},"extern":"1","_id":"13398","year":"2015","status":"public","quality_controlled":"1","page":"463-479","keyword":["Physical and Theoretical Chemistry"],"day":"07","publication_status":"published","fulldoi":"https://doi.org/10.1039/c5fd90041g","article_type":"letter_note","author":[{"first_name":"Yugang","full_name":"Sun, Yugang","last_name":"Sun"},{"first_name":"Leonardo","full_name":"Scarabelli, Leonardo","last_name":"Scarabelli"},{"first_name":"Nicholas","full_name":"Kotov, Nicholas","last_name":"Kotov"},{"first_name":"Moritz","full_name":"Tebbe, Moritz","last_name":"Tebbe"},{"first_name":"Xiao-Min","full_name":"Lin, Xiao-Min","last_name":"Lin"},{"full_name":"Brullot, Ward","first_name":"Ward","last_name":"Brullot"},{"first_name":"Lucio","full_name":"Isa, Lucio","last_name":"Isa"},{"first_name":"Peter","full_name":"Schurtenberger, Peter","last_name":"Schurtenberger"},{"last_name":"Moehwald","full_name":"Moehwald, Helmuth","first_name":"Helmuth"},{"first_name":"Igor","full_name":"Fedin, Igor","last_name":"Fedin"},{"first_name":"Orlin","full_name":"Velev, Orlin","last_name":"Velev"},{"last_name":"Faivre","full_name":"Faivre, Damien","first_name":"Damien"},{"last_name":"Sorensen","full_name":"Sorensen, Christopher","first_name":"Christopher"},{"last_name":"Perzynski","first_name":"Régine","full_name":"Perzynski, Régine"},{"last_name":"Chanana","full_name":"Chanana, Munish","first_name":"Munish"},{"last_name":"Li","full_name":"Li, Zhihai","first_name":"Zhihai"},{"last_name":"Bresme","first_name":"Fernando","full_name":"Bresme, Fernando"},{"first_name":"Petr","full_name":"Král, Petr","last_name":"Král"},{"last_name":"Firlar","first_name":"Emre","full_name":"Firlar, Emre"},{"full_name":"Schiffrin, David","first_name":"David","last_name":"Schiffrin"},{"last_name":"Souza Junior","first_name":"Joao Batista","full_name":"Souza Junior, Joao Batista"},{"last_name":"Fery","full_name":"Fery, Andreas","first_name":"Andreas"},{"full_name":"Shevchenko, Elena","first_name":"Elena","last_name":"Shevchenko"},{"last_name":"Tarhan","full_name":"Tarhan, Ozgur","first_name":"Ozgur"},{"last_name":"Alivisatos","first_name":"Armand Paul","full_name":"Alivisatos, Armand Paul"},{"last_name":"Disch","full_name":"Disch, Sabrina","first_name":"Sabrina"},{"last_name":"Klajn","full_name":"Klajn, Rafal","id":"8e84690e-1e48-11ed-a02b-a1e6fb8bb53b","first_name":"Rafal"},{"first_name":"Suvojit","full_name":"Ghosh, Suvojit","last_name":"Ghosh"}],"pmid":1,"scopus_import":"1","publisher":"Royal Society of Chemistry","doi":"10.1039/c5fd90041g","date_updated":"2023-08-08T07:16:20Z","intvolume":"       181","citation":{"ieee":"Y. Sun <i>et al.</i>, “Field-assisted self-assembly process: General discussion,” <i>Faraday Discussions</i>, vol. 181. Royal Society of Chemistry, pp. 463–479, 2015.","apa":"Sun, Y., Scarabelli, L., Kotov, N., Tebbe, M., Lin, X.-M., Brullot, W., … Ghosh, S. (2015). Field-assisted self-assembly process: General discussion. <i>Faraday Discussions</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/c5fd90041g\">https://doi.org/10.1039/c5fd90041g</a>","chicago":"Sun, Yugang, Leonardo Scarabelli, Nicholas Kotov, Moritz Tebbe, Xiao-Min Lin, Ward Brullot, Lucio Isa, et al. “Field-Assisted Self-Assembly Process: General Discussion.” <i>Faraday Discussions</i>. Royal Society of Chemistry, 2015. <a href=\"https://doi.org/10.1039/c5fd90041g\">https://doi.org/10.1039/c5fd90041g</a>.","ista":"Sun Y, Scarabelli L, Kotov N, Tebbe M, Lin X-M, Brullot W, Isa L, Schurtenberger P, Moehwald H, Fedin I, Velev O, Faivre D, Sorensen C, Perzynski R, Chanana M, Li Z, Bresme F, Král P, Firlar E, Schiffrin D, Souza Junior JB, Fery A, Shevchenko E, Tarhan O, Alivisatos AP, Disch S, Klajn R, Ghosh S. 2015. Field-assisted self-assembly process: General discussion. Faraday Discussions. 181, 463–479.","short":"Y. Sun, L. Scarabelli, N. Kotov, M. Tebbe, X.-M. Lin, W. Brullot, L. Isa, P. Schurtenberger, H. Moehwald, I. Fedin, O. Velev, D. Faivre, C. Sorensen, R. Perzynski, M. Chanana, Z. Li, F. Bresme, P. Král, E. Firlar, D. Schiffrin, J.B. Souza Junior, A. Fery, E. Shevchenko, O. Tarhan, A.P. Alivisatos, S. Disch, R. Klajn, S. Ghosh, Faraday Discussions 181 (2015) 463–479.","ama":"Sun Y, Scarabelli L, Kotov N, et al. Field-assisted self-assembly process: General discussion. <i>Faraday Discussions</i>. 2015;181:463-479. doi:<a href=\"https://doi.org/10.1039/c5fd90041g\">10.1039/c5fd90041g</a>","mla":"Sun, Yugang, et al. “Field-Assisted Self-Assembly Process: General Discussion.” <i>Faraday Discussions</i>, vol. 181, Royal Society of Chemistry, 2015, pp. 463–79, doi:<a href=\"https://doi.org/10.1039/c5fd90041g\">10.1039/c5fd90041g</a>."},"volume":181,"publication":"Faraday Discussions","type":"journal_article"},{"department":[{"_id":"JiFr"}],"date_published":"2015-07-06T00:00:00Z","date_created":"2018-12-11T11:51:42Z","article_processing_charge":"No","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","isi":1,"external_id":{"pmid":["27250258"],"isi":["000364407200001"]},"oa_version":"Submitted Version","title":"V-ATPase activity in the TGN/EE is required for exocytosis and recycling in Arabidopsis","main_file_link":[{"open_access":"1","url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4905525/"}],"year":"2015","quality_controlled":"1","status":"public","_id":"1383","month":"07","language":[{"iso":"eng"}],"author":[{"last_name":"Yu","full_name":"Yu, Luo","first_name":"Luo"},{"first_name":"Stefan","full_name":"Scholl, Stefan","last_name":"Scholl"},{"full_name":"Doering, Anett","first_name":"Anett","last_name":"Doering"},{"last_name":"Yi","full_name":"Yi, Zhang","first_name":"Zhang"},{"last_name":"Irani","full_name":"Irani, Niloufer","first_name":"Niloufer"},{"last_name":"Di Rubbo","full_name":"Di Rubbo, Simone","first_name":"Simone"},{"first_name":"Lutz","full_name":"Neumetzler, Lutz","last_name":"Neumetzler"},{"full_name":"Krishnamoorthy, Praveen","first_name":"Praveen","last_name":"Krishnamoorthy"},{"full_name":"Van Houtte, Isabelle","first_name":"Isabelle","last_name":"Van Houtte"},{"first_name":"Evelien","full_name":"Mylle, Evelien","last_name":"Mylle"},{"last_name":"Bischoff","first_name":"Volker","full_name":"Bischoff, Volker"},{"first_name":"Samantha","full_name":"Vernhettes, Samantha","last_name":"Vernhettes"},{"full_name":"Winne, Johan","first_name":"Johan","last_name":"Winne"},{"orcid":"0000-0002-8302-7596","first_name":"Jirí","full_name":"Friml, Jirí","id":"4159519E-F248-11E8-B48F-1D18A9856A87","last_name":"Friml"},{"last_name":"Stierhof","first_name":"York","full_name":"Stierhof, York"},{"last_name":"Schumacher","first_name":"Karin","full_name":"Schumacher, Karin"},{"last_name":"Persson","first_name":"Staffan","full_name":"Persson, Staffan"},{"first_name":"Eugenia","full_name":"Russinova, Eugenia","last_name":"Russinova"}],"publist_id":"5827","article_type":"original","abstract":[{"lang":"eng","text":"In plants, vacuolar H+-ATPase (V-ATPase) activity acidifies both the trans-Golgi network/early endosome (TGN/EE) and the vacuole. This dual V-ATPase function has impeded our understanding of how the pH homeostasis within the plant TGN/EE controls exo- and endocytosis. Here, we show that the weak V-ATPase mutant deetiolated3 (det3) displayed a pH increase in the TGN/EE, but not in the vacuole, strongly impairing secretion and recycling of the brassinosteroid receptor and the cellulose synthase complexes to the plasma membrane, in contrast to mutants lacking tonoplast-localized V-ATPase activity only. The brassinosteroid insensitivity and the cellulose deficiency defects in det3 were tightly correlated with reduced Golgi and TGN/EE motility. Thus, our results provide strong evidence that acidification of the TGN/EE, but not of the vacuole, is indispensable for functional secretion and recycling in plants."}],"fulldoi":"https://doi.org/10.1038/nplants.2015.94","publication_status":"published","day":"06","issue":"7","publication":"Nature Plants","volume":1,"type":"journal_article","article_number":"15094","citation":{"chicago":"Yu, Luo, Stefan Scholl, Anett Doering, Zhang Yi, Niloufer Irani, Simone Di Rubbo, Lutz Neumetzler, et al. “V-ATPase Activity in the TGN/EE Is Required for Exocytosis and Recycling in Arabidopsis.” <i>Nature Plants</i>. Nature Publishing Group, 2015. <a href=\"https://doi.org/10.1038/nplants.2015.94\">https://doi.org/10.1038/nplants.2015.94</a>.","mla":"Yu, Luo, et al. “V-ATPase Activity in the TGN/EE Is Required for Exocytosis and Recycling in Arabidopsis.” <i>Nature Plants</i>, vol. 1, no. 7, 15094, Nature Publishing Group, 2015, doi:<a href=\"https://doi.org/10.1038/nplants.2015.94\">10.1038/nplants.2015.94</a>.","ama":"Yu L, Scholl S, Doering A, et al. V-ATPase activity in the TGN/EE is required for exocytosis and recycling in Arabidopsis. <i>Nature Plants</i>. 2015;1(7). doi:<a href=\"https://doi.org/10.1038/nplants.2015.94\">10.1038/nplants.2015.94</a>","short":"L. Yu, S. Scholl, A. Doering, Z. Yi, N. Irani, S. Di Rubbo, L. Neumetzler, P. Krishnamoorthy, I. Van Houtte, E. Mylle, V. Bischoff, S. Vernhettes, J. Winne, J. Friml, Y. Stierhof, K. Schumacher, S. Persson, E. Russinova, Nature Plants 1 (2015).","ista":"Yu L, Scholl S, Doering A, Yi Z, Irani N, Di Rubbo S, Neumetzler L, Krishnamoorthy P, Van Houtte I, Mylle E, Bischoff V, Vernhettes S, Winne J, Friml J, Stierhof Y, Schumacher K, Persson S, Russinova E. 2015. V-ATPase activity in the TGN/EE is required for exocytosis and recycling in Arabidopsis. Nature Plants. 1(7), 15094.","ieee":"L. Yu <i>et al.</i>, “V-ATPase activity in the TGN/EE is required for exocytosis and recycling in Arabidopsis,” <i>Nature Plants</i>, vol. 1, no. 7. Nature Publishing Group, 2015.","apa":"Yu, L., Scholl, S., Doering, A., Yi, Z., Irani, N., Di Rubbo, S., … Russinova, E. (2015). V-ATPase activity in the TGN/EE is required for exocytosis and recycling in Arabidopsis. <i>Nature Plants</i>. Nature Publishing Group. <a href=\"https://doi.org/10.1038/nplants.2015.94\">https://doi.org/10.1038/nplants.2015.94</a>"},"doi":"10.1038/nplants.2015.94","intvolume":"         1","date_updated":"2025-09-29T11:04:05Z","oa":1,"pmid":1,"scopus_import":"1","publisher":"Nature Publishing Group"},{"_id":"1401","language":[{"iso":"eng"}],"publication_identifier":{"issn":["2663-337X"]},"month":"04","has_accepted_license":"1","page":"144","main_file_link":[{"url":"http://users.sussex.ac.uk/~nq28/viktoriia/Thesis_Sharmanska.pdf"}],"status":"public","year":"2015","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","article_processing_charge":"No","title":"Learning with attributes for object recognition: Parametric and non-parametrics views","acknowledgement":"I would like to thank my supervisor, Christoph Lampert, for guidance throughout my studies and for patience in transforming me into a scientist, and my thesis committee, Chris Wojtan and Horst Bischof, for their help and advice. \r\n\r\nI would like to thank Elisabeth Hacker who perfectly assisted all my administrative needs and was always nice and friendly to me, and the campus team for making the IST Austria campus my second home. \r\nI was honored to collaborate with brilliant researchers and to learn from their experience. Undoubtedly, I learned most of all from Novi Quadrianto: brainstorming our projects and getting exciting results was the most enjoyable part of my work – thank you! I am also grateful to David Knowles, Zoubin Ghahramani, Daniel Hernández-Lobato, Kristian Kersting and Anastasia Pentina for the fantastic projects we worked on together, and to Kristen Grauman and Adriana Kovashka for the exceptional experience working with user studies. I would like to thank my colleagues at IST Austria and my office mates who shared their happy moods, scientific breakthroughs and thought-provoking conversations with me: Chao, Filip, Rustem, Asya, Sameh, Alex, Vlad, Mayu, Neel, Csaba, Thomas, Vladimir, Cristina, Alex Z., Avro, Amelie and Emilie, Andreas H. and Andreas E., Chris, Lena, Michael, Ali and Ipek, Vera, Igor, Katia. Special thanks to Morten for the countless games of table soccer we played together and the tournaments we teamed up for: we will definitely win next time:) A very warm hug to Asya for always being so inspiring and supportive to me, and for helping me to increase the proportion of female computer scientists in our group. ","oa_version":"Published Version","department":[{"_id":"ChLa"},{"_id":"GradSch"}],"ddc":["000"],"date_created":"2018-12-11T11:51:48Z","file":[{"date_created":"2021-02-22T11:33:17Z","success":1,"checksum":"3605b402bb6934e09ae4cf672c84baf7","file_name":"2015_Thesis_Sharmanska.pdf","creator":"dernst","relation":"main_file","file_size":7964342,"content_type":"application/pdf","date_updated":"2021-02-22T11:33:17Z","file_id":"9177","access_level":"open_access"},{"creator":"cchlebak","file_name":"2015_Thesis_Sharmanska_pdfa.pdf","checksum":"e37593b3ee75bf3180629df2d6ca8f4e","date_created":"2021-11-16T14:40:45Z","access_level":"closed","content_type":"application/pdf","date_updated":"2021-11-17T13:47:24Z","file_id":"10297","relation":"main_file","file_size":7372241}],"date_published":"2015-04-01T00:00:00Z","degree_awarded":"PhD","date_updated":"2026-04-09T14:25:49Z","doi":"10.15479/at:ista:1401","publisher":"Institute of Science and Technology Austria","oa":1,"type":"dissertation","citation":{"ieee":"V. Sharmanska, “Learning with attributes for object recognition: Parametric and non-parametrics views,” Institute of Science and Technology Austria, 2015.","apa":"Sharmanska, V. (2015). <i>Learning with attributes for object recognition: Parametric and non-parametrics views</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:1401\">https://doi.org/10.15479/at:ista:1401</a>","chicago":"Sharmanska, Viktoriia. “Learning with Attributes for Object Recognition: Parametric and Non-Parametrics Views.” Institute of Science and Technology Austria, 2015. <a href=\"https://doi.org/10.15479/at:ista:1401\">https://doi.org/10.15479/at:ista:1401</a>.","mla":"Sharmanska, Viktoriia. <i>Learning with Attributes for Object Recognition: Parametric and Non-Parametrics Views</i>. Institute of Science and Technology Austria, 2015, doi:<a href=\"https://doi.org/10.15479/at:ista:1401\">10.15479/at:ista:1401</a>.","ama":"Sharmanska V. Learning with attributes for object recognition: Parametric and non-parametrics views. 2015. doi:<a href=\"https://doi.org/10.15479/at:ista:1401\">10.15479/at:ista:1401</a>","ista":"Sharmanska V. 2015. Learning with attributes for object recognition: Parametric and non-parametrics views. Institute of Science and Technology Austria.","short":"V. Sharmanska, Learning with Attributes for Object Recognition: Parametric and Non-Parametrics Views, Institute of Science and Technology Austria, 2015."},"alternative_title":["ISTA Thesis"],"supervisor":[{"orcid":"0000-0001-8622-7887","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87","first_name":"Christoph","full_name":"Lampert, Christoph","last_name":"Lampert"}],"corr_author":"1","OA_place":"publisher","file_date_updated":"2021-11-17T13:47:24Z","fulldoi":"https://doi.org/10.15479/at:ista:1401","abstract":[{"lang":"eng","text":"The human ability to recognize objects in complex scenes has driven research in the computer vision field over couple of decades. This thesis focuses on the object recognition task in images. That is, given the image, we want the computer system to be able to predict the class of the object that appears in the image. A recent successful attempt to bridge semantic understanding of the image perceived by humans and by computers uses attribute-based models. Attributes are semantic properties of the objects shared across different categories, which humans and computers can decide on. To explore the attribute-based models we take a statistical machine learning approach, and address two key learning challenges in view of object recognition task: learning augmented attributes as mid-level discriminative feature representation, and learning with attributes as privileged information. Our main contributions are parametric and non-parametric models and algorithms to solve these frameworks. In the parametric approach, we explore an autoencoder model combined with the large margin nearest neighbor principle for mid-level feature learning, and linear support vector machines for learning with privileged information. In the non-parametric approach, we propose a supervised Indian Buffet Process for automatic augmentation of semantic attributes, and explore the Gaussian Processes classification framework for learning with privileged information. A thorough experimental analysis shows the effectiveness of the proposed models in both parametric and non-parametric views."}],"publication_status":"published","day":"01","publist_id":"5806","author":[{"orcid":"0000-0003-0192-9308","full_name":"Sharmanska, Viktoriia","first_name":"Viktoriia","id":"2EA6D09E-F248-11E8-B48F-1D18A9856A87","last_name":"Sharmanska"}]},{"citation":{"mla":"Kraus, P. M., et al. “Measurement and Laser Control of Attosecond Charge Migration in Ionized Iodoacetylene.” <i>Science</i>, vol. 350, no. 6262, American Association for the Advancement of Science, 2015, pp. 790–95, doi:<a href=\"https://doi.org/10.1126/science.aab2160\">10.1126/science.aab2160</a>.","ama":"Kraus PM, Mignolet B, Baykusheva DR, et al. Measurement and laser control of attosecond charge migration in ionized iodoacetylene. <i>Science</i>. 2015;350(6262):790-795. doi:<a href=\"https://doi.org/10.1126/science.aab2160\">10.1126/science.aab2160</a>","ista":"Kraus PM, Mignolet B, Baykusheva DR, Rupenyan A, Horný L, Penka EF, Grassi G, Tolstikhin OI, Schneider J, Jensen F, Madsen LB, Bandrauk AD, Remacle F, Wörner HJ. 2015. Measurement and laser control of attosecond charge migration in ionized iodoacetylene. Science. 350(6262), 790–795.","short":"P.M. Kraus, B. Mignolet, D.R. Baykusheva, A. Rupenyan, L. Horný, E.F. Penka, G. Grassi, O.I. Tolstikhin, J. Schneider, F. Jensen, L.B. Madsen, A.D. Bandrauk, F. Remacle, H.J. Wörner, Science 350 (2015) 790–795.","chicago":"Kraus, P. M., B. Mignolet, Denitsa Rangelova Baykusheva, A. Rupenyan, L. Horný, E. F. Penka, G. Grassi, et al. “Measurement and Laser Control of Attosecond Charge Migration in Ionized Iodoacetylene.” <i>Science</i>. American Association for the Advancement of Science, 2015. <a href=\"https://doi.org/10.1126/science.aab2160\">https://doi.org/10.1126/science.aab2160</a>.","apa":"Kraus, P. M., Mignolet, B., Baykusheva, D. R., Rupenyan, A., Horný, L., Penka, E. F., … Wörner, H. J. (2015). Measurement and laser control of attosecond charge migration in ionized iodoacetylene. <i>Science</i>. American Association for the Advancement of Science. <a href=\"https://doi.org/10.1126/science.aab2160\">https://doi.org/10.1126/science.aab2160</a>","ieee":"P. M. Kraus <i>et al.</i>, “Measurement and laser control of attosecond charge migration in ionized iodoacetylene,” <i>Science</i>, vol. 350, no. 6262. American Association for the Advancement of Science, pp. 790–795, 2015."},"issue":"6262","publication":"Science","volume":350,"type":"journal_article","pmid":1,"scopus_import":"1","publisher":"American Association for the Advancement of Science","doi":"10.1126/science.aab2160","intvolume":"       350","date_updated":"2023-08-22T08:47:39Z","article_type":"original","author":[{"first_name":"P. M.","full_name":"Kraus, P. M.","last_name":"Kraus"},{"last_name":"Mignolet","full_name":"Mignolet, B.","first_name":"B."},{"last_name":"Baykusheva","first_name":"Denitsa Rangelova","full_name":"Baykusheva, Denitsa Rangelova","id":"71b4d059-2a03-11ee-914d-dfa3beed6530"},{"last_name":"Rupenyan","full_name":"Rupenyan, A.","first_name":"A."},{"full_name":"Horný, L.","first_name":"L.","last_name":"Horný"},{"first_name":"E. F.","full_name":"Penka, E. F.","last_name":"Penka"},{"full_name":"Grassi, G.","first_name":"G.","last_name":"Grassi"},{"last_name":"Tolstikhin","first_name":"O. I.","full_name":"Tolstikhin, O. I."},{"full_name":"Schneider, J.","first_name":"J.","last_name":"Schneider"},{"first_name":"F.","full_name":"Jensen, F.","last_name":"Jensen"},{"last_name":"Madsen","first_name":"L. B.","full_name":"Madsen, L. B."},{"first_name":"A. D.","full_name":"Bandrauk, A. D.","last_name":"Bandrauk"},{"first_name":"F.","full_name":"Remacle, F.","last_name":"Remacle"},{"first_name":"H. J.","full_name":"Wörner, H. J.","last_name":"Wörner"}],"keyword":["Multidisciplinary"],"publication_status":"published","day":"22","abstract":[{"lang":"eng","text":"The ultrafast motion of electrons and holes after light-matter interaction is fundamental to a broad range of chemical and biophysical processes. We advanced high-harmonic spectroscopy to resolve spatially and temporally the migration of an electron hole immediately after ionization of iodoacetylene while simultaneously demonstrating extensive control over the process. A multidimensional approach, based on the measurement and accurate theoretical description of both even and odd harmonic orders, enabled us to reconstruct both quantum amplitudes and phases of the electronic states with a resolution of ~100 attoseconds. We separately reconstructed quasi-field-free and laser-controlled charge migration as a function of the spatial orientation of the molecule and determined the shape of the hole created by ionization. Our technique opens the prospect of laser control over electronic primary processes."}],"fulldoi":"https://doi.org/10.1126/science.aab2160","year":"2015","status":"public","quality_controlled":"1","page":"790-795","month":"10","publication_identifier":{"issn":["0036-8075"],"eissn":["1095-9203"]},"language":[{"iso":"eng"}],"extern":"1","_id":"14013","date_published":"2015-10-22T00:00:00Z","date_created":"2023-08-10T06:37:35Z","external_id":{"pmid":["26494175"]},"oa_version":"None","title":"Measurement and laser control of attosecond charge migration in ionized iodoacetylene","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"},{"extern":"1","_id":"14014","month":"11","publication_identifier":{"issn":["1742-6588"],"eissn":["1742-6596"]},"language":[{"iso":"eng"}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1088/1742-6596/635/11/112135"}],"status":"public","quality_controlled":"1","year":"2015","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","title":"Resolving the dynamics of valence-shell electrons and nuclei through laser-induced diffraction and holography","date_published":"2015-11-01T00:00:00Z","date_created":"2023-08-10T06:37:44Z","doi":"10.1088/1742-6596/635/11/112135","intvolume":"       635","date_updated":"2023-08-22T08:51:33Z","oa":1,"scopus_import":"1","publisher":"IOP Publishing","issue":"11","volume":635,"publication":"Journal of Physics: Conference Series","type":"journal_article","article_number":"112135","citation":{"ieee":"S. G. Walt, N. B. Ram, A. von Conta, D. R. Baykusheva, M. Atala, and H. J. Wörner, “Resolving the dynamics of valence-shell electrons and nuclei through laser-induced diffraction and holography,” <i>Journal of Physics: Conference Series</i>, vol. 635, no. 11. IOP Publishing, 2015.","apa":"Walt, S. G., Ram, N. B., von Conta, A., Baykusheva, D. R., Atala, M., &#38; Wörner, H. J. (2015). Resolving the dynamics of valence-shell electrons and nuclei through laser-induced diffraction and holography. <i>Journal of Physics: Conference Series</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/1742-6596/635/11/112135\">https://doi.org/10.1088/1742-6596/635/11/112135</a>","chicago":"Walt, Samuel G, N Bhargava Ram, Aaron von Conta, Denitsa Rangelova Baykusheva, Marcos Atala, and Hans Jakob Wörner. “Resolving the Dynamics of Valence-Shell Electrons and Nuclei through Laser-Induced Diffraction and Holography.” <i>Journal of Physics: Conference Series</i>. IOP Publishing, 2015. <a href=\"https://doi.org/10.1088/1742-6596/635/11/112135\">https://doi.org/10.1088/1742-6596/635/11/112135</a>.","mla":"Walt, Samuel G., et al. “Resolving the Dynamics of Valence-Shell Electrons and Nuclei through Laser-Induced Diffraction and Holography.” <i>Journal of Physics: Conference Series</i>, vol. 635, no. 11, 112135, IOP Publishing, 2015, doi:<a href=\"https://doi.org/10.1088/1742-6596/635/11/112135\">10.1088/1742-6596/635/11/112135</a>.","ama":"Walt SG, Ram NB, von Conta A, Baykusheva DR, Atala M, Wörner HJ. Resolving the dynamics of valence-shell electrons and nuclei through laser-induced diffraction and holography. <i>Journal of Physics: Conference Series</i>. 2015;635(11). doi:<a href=\"https://doi.org/10.1088/1742-6596/635/11/112135\">10.1088/1742-6596/635/11/112135</a>","ista":"Walt SG, Ram NB, von Conta A, Baykusheva DR, Atala M, Wörner HJ. 2015. Resolving the dynamics of valence-shell electrons and nuclei through laser-induced diffraction and holography. Journal of Physics: Conference Series. 635(11), 112135.","short":"S.G. Walt, N.B. Ram, A. von Conta, D.R. Baykusheva, M. Atala, H.J. Wörner, Journal of Physics: Conference Series 635 (2015)."},"abstract":[{"text":"We have studied a coupled electronic-nuclear wave packet in nitric oxide using time-resolved strong-field photoelectron holography and rescattering. We show that the electronic dynamics mainly appears in the holographic structures whereas nuclear motion strongly modulates the angular distribution of the rescattered photoelectrons.","lang":"eng"}],"fulldoi":"https://doi.org/10.1088/1742-6596/635/11/112135","publication_status":"published","day":"01","keyword":["General Physics and Astronomy"],"author":[{"last_name":"Walt","full_name":"Walt, Samuel G","first_name":"Samuel G"},{"last_name":"Ram","full_name":"Ram, N Bhargava","first_name":"N Bhargava"},{"full_name":"von Conta, Aaron","first_name":"Aaron","last_name":"von Conta"},{"last_name":"Baykusheva","full_name":"Baykusheva, Denitsa Rangelova","id":"71b4d059-2a03-11ee-914d-dfa3beed6530","first_name":"Denitsa Rangelova"},{"last_name":"Atala","full_name":"Atala, Marcos","first_name":"Marcos"},{"full_name":"Wörner, Hans Jakob","first_name":"Hans Jakob","last_name":"Wörner"}],"article_type":"original"},{"citation":{"ista":"Kraus PM, Mignolet B, Baykusheva DR, Rupenyan A, Horný L, Penka EF, Tolstikhin OI, Schneider J, Jensen F, Madsen LB, Bandrauk AD, Remacle F, Wörner HJ. 2015. Attosecond charge migration and its laser control. Journal of Physics: Conference Series. 635(11), 112136.","short":"P.M. Kraus, B. Mignolet, D.R. Baykusheva, A. Rupenyan, L. Horný, E.F. Penka, O.I. Tolstikhin, J. Schneider, F. Jensen, L.B. Madsen, A.D. Bandrauk, F. Remacle, H.J. Wörner, Journal of Physics: Conference Series 635 (2015).","mla":"Kraus, P. M., et al. “Attosecond Charge Migration and Its Laser Control.” <i>Journal of Physics: Conference Series</i>, vol. 635, no. 11, 112136, IOP Publishing, 2015, doi:<a href=\"https://doi.org/10.1088/1742-6596/635/11/112136\">10.1088/1742-6596/635/11/112136</a>.","ama":"Kraus PM, Mignolet B, Baykusheva DR, et al. Attosecond charge migration and its laser control. <i>Journal of Physics: Conference Series</i>. 2015;635(11). doi:<a href=\"https://doi.org/10.1088/1742-6596/635/11/112136\">10.1088/1742-6596/635/11/112136</a>","chicago":"Kraus, P M, B Mignolet, Denitsa Rangelova Baykusheva, A Rupenyan, L Horný, E F Penka, O I Tolstikhin, et al. “Attosecond Charge Migration and Its Laser Control.” <i>Journal of Physics: Conference Series</i>. IOP Publishing, 2015. <a href=\"https://doi.org/10.1088/1742-6596/635/11/112136\">https://doi.org/10.1088/1742-6596/635/11/112136</a>.","apa":"Kraus, P. M., Mignolet, B., Baykusheva, D. R., Rupenyan, A., Horný, L., Penka, E. F., … Wörner, H. J. (2015). Attosecond charge migration and its laser control. <i>Journal of Physics: Conference Series</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/1742-6596/635/11/112136\">https://doi.org/10.1088/1742-6596/635/11/112136</a>","ieee":"P. M. Kraus <i>et al.</i>, “Attosecond charge migration and its laser control,” <i>Journal of Physics: Conference Series</i>, vol. 635, no. 11. IOP Publishing, 2015."},"article_number":"112136","type":"journal_article","publication":"Journal of Physics: Conference Series","volume":635,"issue":"11","scopus_import":"1","publisher":"IOP Publishing","oa":1,"intvolume":"       635","date_updated":"2023-08-22T08:49:14Z","doi":"10.1088/1742-6596/635/11/112136","article_type":"original","author":[{"first_name":"P M","full_name":"Kraus, P M","last_name":"Kraus"},{"last_name":"Mignolet","first_name":"B","full_name":"Mignolet, B"},{"full_name":"Baykusheva, Denitsa Rangelova","first_name":"Denitsa Rangelova","id":"71b4d059-2a03-11ee-914d-dfa3beed6530","last_name":"Baykusheva"},{"last_name":"Rupenyan","full_name":"Rupenyan, A","first_name":"A"},{"last_name":"Horný","first_name":"L","full_name":"Horný, L"},{"full_name":"Penka, E F","first_name":"E F","last_name":"Penka"},{"last_name":"Tolstikhin","first_name":"O I","full_name":"Tolstikhin, O I"},{"full_name":"Schneider, J","first_name":"J","last_name":"Schneider"},{"last_name":"Jensen","first_name":"F","full_name":"Jensen, F"},{"full_name":"Madsen, L B","first_name":"L B","last_name":"Madsen"},{"last_name":"Bandrauk","full_name":"Bandrauk, A D","first_name":"A D"},{"last_name":"Remacle","first_name":"F","full_name":"Remacle, F"},{"last_name":"Wörner","first_name":"H J","full_name":"Wörner, H J"}],"publication_status":"published","day":"01","keyword":["General Physics and Astronomy"],"fulldoi":"https://doi.org/10.1088/1742-6596/635/11/112136","abstract":[{"text":"We advance high-harmonic spectroscopy to resolve molecular charge migration in time and space and simultaneously demonstrate extensive control over the process. A multidimensional approach enables us to reconstruct both quantum amplitudes and phases with a resolution of better than 100 attoseconds and to separately reconstruct field-free and laser- driven charge migration. Our techniques make charge migration in molecules measurable on the attosecond time scale and open new avenues for laser control of electronic primary processes.","lang":"eng"}],"year":"2015","quality_controlled":"1","status":"public","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1088/1742-6596/635/11/112136"}],"publication_identifier":{"issn":["1742-6588"],"eissn":["1742-6596"]},"language":[{"iso":"eng"}],"month":"07","_id":"14015","extern":"1","date_created":"2023-08-10T06:37:53Z","date_published":"2015-07-01T00:00:00Z","title":"Attosecond charge migration and its laser control","oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No"},{"date_created":"2023-08-10T06:38:01Z","date_published":"2015-05-05T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","oa_version":"Published Version","title":"Observation of laser-induced electronic structure in oriented polyatomic molecules","external_id":{"pmid":["25940229"]},"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1038/ncomms8039"}],"quality_controlled":"1","year":"2015","status":"public","extern":"1","_id":"14016","language":[{"iso":"eng"}],"publication_identifier":{"eissn":["2041-1723"]},"month":"05","author":[{"last_name":"Kraus","first_name":"P. M.","full_name":"Kraus, P. M."},{"first_name":"O. I.","full_name":"Tolstikhin, O. I.","last_name":"Tolstikhin"},{"id":"71b4d059-2a03-11ee-914d-dfa3beed6530","first_name":"Denitsa Rangelova","full_name":"Baykusheva, Denitsa Rangelova","last_name":"Baykusheva"},{"full_name":"Rupenyan, A.","first_name":"A.","last_name":"Rupenyan"},{"last_name":"Schneider","full_name":"Schneider, J.","first_name":"J."},{"last_name":"Bisgaard","first_name":"C. Z.","full_name":"Bisgaard, C. Z."},{"last_name":"Morishita","first_name":"T.","full_name":"Morishita, T."},{"full_name":"Jensen, F.","first_name":"F.","last_name":"Jensen"},{"last_name":"Madsen","full_name":"Madsen, L. B.","first_name":"L. B."},{"last_name":"Wörner","full_name":"Wörner, H. J.","first_name":"H. J."}],"article_type":"original","fulldoi":"https://doi.org/10.1038/ncomms8039","abstract":[{"lang":"eng","text":"All attosecond time-resolved measurements have so far relied on the use of intense near-infrared laser pulses. In particular, attosecond streaking, laser-induced electron diffraction and high-harmonic generation all make use of non-perturbative light–matter interactions. Remarkably, the effect of the strong laser field on the studied sample has often been neglected in previous studies. Here we use high-harmonic spectroscopy to measure laser-induced modifications of the electronic structure of molecules. We study high-harmonic spectra of spatially oriented CH3F and CH3Br as generic examples of polar polyatomic molecules. We accurately measure intensity ratios of even and odd-harmonic orders, and of the emission from aligned and unaligned molecules. We show that these robust observables reveal a substantial modification of the molecular electronic structure by the external laser field. Our insights offer new challenges and opportunities for a range of emerging strong-field attosecond spectroscopies."}],"keyword":["General Physics and Astronomy","General Biochemistry","Genetics and Molecular Biology","General Chemistry","Multidisciplinary"],"day":"05","publication_status":"published","volume":6,"publication":"Nature Communications","type":"journal_article","article_number":"7039","citation":{"ieee":"P. M. Kraus <i>et al.</i>, “Observation of laser-induced electronic structure in oriented polyatomic molecules,” <i>Nature Communications</i>, vol. 6. Springer Nature, 2015.","apa":"Kraus, P. M., Tolstikhin, O. I., Baykusheva, D. R., Rupenyan, A., Schneider, J., Bisgaard, C. Z., … Wörner, H. J. (2015). Observation of laser-induced electronic structure in oriented polyatomic molecules. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/ncomms8039\">https://doi.org/10.1038/ncomms8039</a>","chicago":"Kraus, P. M., O. I. Tolstikhin, Denitsa Rangelova Baykusheva, A. Rupenyan, J. Schneider, C. Z. Bisgaard, T. Morishita, F. Jensen, L. B. Madsen, and H. J. Wörner. “Observation of Laser-Induced Electronic Structure in Oriented Polyatomic Molecules.” <i>Nature Communications</i>. Springer Nature, 2015. <a href=\"https://doi.org/10.1038/ncomms8039\">https://doi.org/10.1038/ncomms8039</a>.","ista":"Kraus PM, Tolstikhin OI, Baykusheva DR, Rupenyan A, Schneider J, Bisgaard CZ, Morishita T, Jensen F, Madsen LB, Wörner HJ. 2015. Observation of laser-induced electronic structure in oriented polyatomic molecules. Nature Communications. 6, 7039.","short":"P.M. Kraus, O.I. Tolstikhin, D.R. Baykusheva, A. Rupenyan, J. Schneider, C.Z. Bisgaard, T. Morishita, F. Jensen, L.B. Madsen, H.J. Wörner, Nature Communications 6 (2015).","mla":"Kraus, P. M., et al. “Observation of Laser-Induced Electronic Structure in Oriented Polyatomic Molecules.” <i>Nature Communications</i>, vol. 6, 7039, Springer Nature, 2015, doi:<a href=\"https://doi.org/10.1038/ncomms8039\">10.1038/ncomms8039</a>.","ama":"Kraus PM, Tolstikhin OI, Baykusheva DR, et al. Observation of laser-induced electronic structure in oriented polyatomic molecules. <i>Nature Communications</i>. 2015;6. doi:<a href=\"https://doi.org/10.1038/ncomms8039\">10.1038/ncomms8039</a>"},"intvolume":"         6","date_updated":"2023-08-22T08:52:56Z","doi":"10.1038/ncomms8039","publisher":"Springer Nature","scopus_import":"1","oa":1,"pmid":1},{"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1504.03933"}],"status":"public","year":"2015","quality_controlled":"1","_id":"14017","extern":"1","month":"02","language":[{"iso":"eng"}],"publication_identifier":{"issn":["1050-2947"],"eissn":["1094-1622"]},"date_published":"2015-02-19T00:00:00Z","date_created":"2023-08-10T06:38:10Z","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","external_id":{"arxiv":["1504.03933"]},"title":"Theoretical study of molecular electronic and rotational coherences by high-order-harmonic generation","oa_version":"Preprint","issue":"2","type":"journal_article","volume":91,"publication":"Physical Review A","citation":{"ieee":"S. B. Zhang, D. R. Baykusheva, P. M. Kraus, H. J. Wörner, and N. Rohringer, “Theoretical study of molecular electronic and rotational coherences by high-order-harmonic generation,” <i>Physical Review A</i>, vol. 91, no. 2. American Physical Society, 2015.","apa":"Zhang, S. B., Baykusheva, D. R., Kraus, P. M., Wörner, H. J., &#38; Rohringer, N. (2015). Theoretical study of molecular electronic and rotational coherences by high-order-harmonic generation. <i>Physical Review A</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physreva.91.023421\">https://doi.org/10.1103/physreva.91.023421</a>","chicago":"Zhang, Song Bin, Denitsa Rangelova Baykusheva, Peter M. Kraus, Hans Jakob Wörner, and Nina Rohringer. “Theoretical Study of Molecular Electronic and Rotational Coherences by High-Order-Harmonic Generation.” <i>Physical Review A</i>. American Physical Society, 2015. <a href=\"https://doi.org/10.1103/physreva.91.023421\">https://doi.org/10.1103/physreva.91.023421</a>.","ama":"Zhang SB, Baykusheva DR, Kraus PM, Wörner HJ, Rohringer N. Theoretical study of molecular electronic and rotational coherences by high-order-harmonic generation. <i>Physical Review A</i>. 2015;91(2). doi:<a href=\"https://doi.org/10.1103/physreva.91.023421\">10.1103/physreva.91.023421</a>","mla":"Zhang, Song Bin, et al. “Theoretical Study of Molecular Electronic and Rotational Coherences by High-Order-Harmonic Generation.” <i>Physical Review A</i>, vol. 91, no. 2, 023421, American Physical Society, 2015, doi:<a href=\"https://doi.org/10.1103/physreva.91.023421\">10.1103/physreva.91.023421</a>.","ista":"Zhang SB, Baykusheva DR, Kraus PM, Wörner HJ, Rohringer N. 2015. Theoretical study of molecular electronic and rotational coherences by high-order-harmonic generation. Physical Review A. 91(2), 023421.","short":"S.B. Zhang, D.R. Baykusheva, P.M. Kraus, H.J. Wörner, N. Rohringer, Physical Review A 91 (2015)."},"article_number":"023421","doi":"10.1103/physreva.91.023421","intvolume":"        91","date_updated":"2023-08-22T08:56:34Z","oa":1,"scopus_import":"1","publisher":"American Physical Society","author":[{"first_name":"Song Bin","full_name":"Zhang, Song Bin","last_name":"Zhang"},{"last_name":"Baykusheva","first_name":"Denitsa Rangelova","full_name":"Baykusheva, Denitsa Rangelova","id":"71b4d059-2a03-11ee-914d-dfa3beed6530"},{"last_name":"Kraus","first_name":"Peter M.","full_name":"Kraus, Peter M."},{"last_name":"Wörner","first_name":"Hans Jakob","full_name":"Wörner, Hans Jakob"},{"last_name":"Rohringer","full_name":"Rohringer, Nina","first_name":"Nina"}],"article_type":"original","abstract":[{"lang":"eng","text":"The detection of electron motion and electronic wave-packet dynamics is one of the core goals of attosecond science. Recently, choosing the nitric oxide molecule as an example, we have introduced and demonstrated an experimental approach to measure coupled valence electronic and rotational wave packets using high-order-harmonic-generation (HHG) spectroscopy [Kraus et al., Phys. Rev. Lett. 111, 243005 (2013)]. A short outline of the theory to describe the combination of the pump and HHG probe process was published together with an extensive discussion of experimental results [Baykusheva et al., Faraday Discuss. 171, 113 (2014)]. The comparison of theory and experiment showed good agreement on a quantitative level. Here, we present the theory in detail, which is based on a generalized density-matrix approach that describes the pump process and the subsequent probing of the wave packets by a semiclassical quantitative rescattering approach. An in-depth analysis of the different Raman scattering contributions to the creation of the coupled rotational and electronic spin-orbit wave packets is made. We present results for parallel and perpendicular linear polarizations of the pump and probe laser pulses. Furthermore, an analysis of the combined rotational-electronic density matrix in terms of irreducible components is presented that facilitates interpretation of the results."}],"fulldoi":"https://doi.org/10.1103/physreva.91.023421","arxiv":1,"publication_status":"published","keyword":["Atomic and Molecular Physics","and Optics"],"day":"19"},{"main_file_link":[{"url":"https://papers.nips.cc/paper/5887-statistical-topological-data-analysis-a-kernel-perspective","open_access":"1"}],"type":"conference","volume":28,"page":"3070 - 3078","year":"2015","quality_controlled":"1","status":"public","citation":{"short":"R. Kwitt, S. Huber, M. Niethammer, W. Lin, U. Bauer, in:, Neural Information Processing Systems Foundation, 2015, pp. 3070–3078.","ista":"Kwitt R, Huber S, Niethammer M, Lin W, Bauer U. 2015. Statistical topological data analysis-A kernel perspective. NIPS: Neural Information Processing Systems, Advances in Neural Information Processing Systems, vol. 28, 3070–3078.","mla":"Kwitt, Roland, et al. <i>Statistical Topological Data Analysis-A Kernel Perspective</i>. Vol. 28, Neural Information Processing Systems Foundation, 2015, pp. 3070–78.","ama":"Kwitt R, Huber S, Niethammer M, Lin W, Bauer U. Statistical topological data analysis-A kernel perspective. In: Vol 28. Neural Information Processing Systems Foundation; 2015:3070-3078.","chicago":"Kwitt, Roland, Stefan Huber, Marc Niethammer, Weili Lin, and Ulrich Bauer. “Statistical Topological Data Analysis-A Kernel Perspective,” 28:3070–78. Neural Information Processing Systems Foundation, 2015.","apa":"Kwitt, R., Huber, S., Niethammer, M., Lin, W., &#38; Bauer, U. (2015). Statistical topological data analysis-A kernel perspective (Vol. 28, pp. 3070–3078). Presented at the NIPS: Neural Information Processing Systems, Montreal, Canada: Neural Information Processing Systems Foundation.","ieee":"R. Kwitt, S. Huber, M. Niethammer, W. Lin, and U. Bauer, “Statistical topological data analysis-A kernel perspective,” presented at the NIPS: Neural Information Processing Systems, Montreal, Canada, 2015, vol. 28, pp. 3070–3078."},"alternative_title":["Advances in Neural Information Processing Systems"],"_id":"1424","date_updated":"2025-06-03T11:41:36Z","intvolume":"        28","month":"12","oa":1,"publisher":"Neural Information Processing Systems Foundation","language":[{"iso":"eng"}],"author":[{"full_name":"Kwitt, Roland","first_name":"Roland","last_name":"Kwitt"},{"first_name":"Stefan","id":"4700A070-F248-11E8-B48F-1D18A9856A87","full_name":"Huber, Stefan","orcid":"0000-0002-8871-5814","last_name":"Huber"},{"first_name":"Marc","full_name":"Niethammer, Marc","last_name":"Niethammer"},{"full_name":"Lin, Weili","first_name":"Weili","last_name":"Lin"},{"full_name":"Bauer, Ulrich","id":"2ADD483A-F248-11E8-B48F-1D18A9856A87","first_name":"Ulrich","orcid":"0000-0002-9683-0724","last_name":"Bauer"}],"publist_id":"5782","department":[{"_id":"HeEd"}],"date_published":"2015-12-01T00:00:00Z","date_created":"2018-12-11T11:51:56Z","article_processing_charge":"No","abstract":[{"text":"We consider the problem of statistical computations with persistence diagrams, a summary representation of topological features in data. These diagrams encode persistent homology, a widely used invariant in topological data analysis. While several avenues towards a statistical treatment of the diagrams have been explored recently, we follow an alternative route that is motivated by the success of methods based on the embedding of probability measures into reproducing kernel Hilbert spaces. In fact, a positive definite kernel on persistence diagrams has recently been proposed, connecting persistent homology to popular kernel-based learning techniques such as support vector machines. However, important properties of that kernel enabling a principled use in the context of probability measure embeddings remain to be explored. Our contribution is to close this gap by proving universality of a variant of the original kernel, and to demonstrate its effective use in twosample hypothesis testing on synthetic as well as real-world data.","lang":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_status":"published","conference":{"start_date":"2015-12-07","end_date":"2015-12-12","name":"NIPS: Neural Information Processing Systems","location":"Montreal, Canada"},"day":"01","acknowledgement":"This work was partially supported by the Austrian Science FUnd, project no. KLI 00012.","title":"Statistical topological data analysis-A kernel perspective","oa_version":"Submitted Version"},{"publist_id":"5781","author":[{"last_name":"Pentina","id":"42E87FC6-F248-11E8-B48F-1D18A9856A87","full_name":"Pentina, Anastasia","first_name":"Anastasia"},{"full_name":"Lampert, Christoph","first_name":"Christoph","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-8622-7887","last_name":"Lampert"}],"abstract":[{"lang":"eng","text":"In this work we aim at extending the theoretical foundations of lifelong learning. Previous work analyzing this scenario is based on the assumption that learning tasks are sampled i.i.d. from a task environment or limited to strongly constrained data distributions. Instead, we study two scenarios when lifelong learning is possible, even though the observed tasks do not form an i.i.d. sample: first, when they are sampled from the same environment, but possibly with dependencies, and second, when the task environment is allowed to change over time in a consistent way. In the first case we prove a PAC-Bayesian theorem that can be seen as a direct generalization of the analogous previous result for the i.i.d. case. For the second scenario we propose to learn an inductive bias in form of a transfer procedure. We present a generalization bound and show on a toy example how it can be used to identify a beneficial transfer algorithm."}],"day":"01","publication_status":"published","conference":{"name":"NIPS: Neural Information Processing Systems","location":"Montreal, Canada","start_date":"2015-12-07","end_date":"2015-12-12"},"volume":2015,"type":"conference","alternative_title":["Advances in Neural Information Processing Systems"],"citation":{"ista":"Pentina A, Lampert C. 2015. Lifelong learning with non-i.i.d. tasks. NIPS: Neural Information Processing Systems, Advances in Neural Information Processing Systems, vol. 2015, 1540–1548.","short":"A. Pentina, C. Lampert, in:, Neural Information Processing Systems Foundation, 2015, pp. 1540–1548.","mla":"Pentina, Anastasia, and Christoph Lampert. <i>Lifelong Learning with Non-i.i.d. Tasks</i>. Vol. 2015, Neural Information Processing Systems Foundation, 2015, pp. 1540–48.","ama":"Pentina A, Lampert C. Lifelong learning with non-i.i.d. tasks. In: Vol 2015. Neural Information Processing Systems Foundation; 2015:1540-1548.","chicago":"Pentina, Anastasia, and Christoph Lampert. “Lifelong Learning with Non-i.i.d. Tasks,” 2015:1540–48. Neural Information Processing Systems Foundation, 2015.","apa":"Pentina, A., &#38; Lampert, C. (2015). Lifelong learning with non-i.i.d. tasks (Vol. 2015, pp. 1540–1548). Presented at the NIPS: Neural Information Processing Systems, Montreal, Canada: Neural Information Processing Systems Foundation.","ieee":"A. Pentina and C. Lampert, “Lifelong learning with non-i.i.d. tasks,” presented at the NIPS: Neural Information Processing Systems, Montreal, Canada, 2015, vol. 2015, pp. 1540–1548."},"date_updated":"2025-06-03T11:41:45Z","intvolume":"      2015","publisher":"Neural Information Processing Systems Foundation","scopus_import":"1","oa":1,"department":[{"_id":"ChLa"}],"date_created":"2018-12-11T11:51:57Z","date_published":"2015-01-01T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","oa_version":"None","title":"Lifelong learning with non-i.i.d. tasks","page":"1540 - 1548","main_file_link":[{"open_access":"1","url":"http://papers.nips.cc/paper/6007-lifelong-learning-with-non-iid-tasks"}],"quality_controlled":"1","status":"public","year":"2015","project":[{"name":"Lifelong Learning of Visual Scene Understanding","grant_number":"308036","call_identifier":"FP7","_id":"2532554C-B435-11E9-9278-68D0E5697425"}],"ec_funded":1,"_id":"1425","language":[{"iso":"eng"}],"month":"01"},{"department":[{"_id":"NiBa"},{"_id":"CaGu"}],"date_created":"2018-12-11T11:51:58Z","date_published":"2015-07-11T00:00:00Z","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","article_processing_charge":"No","title":"First steps towards a runtime comparison of natural and artificial evolution","oa_version":"Preprint","external_id":{"isi":["000358795700182"],"arxiv":["1504.06260"]},"isi":1,"page":"1455 - 1462","main_file_link":[{"open_access":"1","url":"http://arxiv.org/abs/1504.06260"}],"project":[{"call_identifier":"FP7","_id":"25B1EC9E-B435-11E9-9278-68D0E5697425","grant_number":"618091","name":"Speed of Adaptation in Population Genetics and Evolutionary Computation"}],"quality_controlled":"1","status":"public","year":"2015","ec_funded":1,"_id":"1430","language":[{"iso":"eng"}],"month":"07","publist_id":"5768","author":[{"id":"2C5658E6-F248-11E8-B48F-1D18A9856A87","full_name":"Paixao, Tiago","first_name":"Tiago","orcid":"0000-0003-2361-3953","last_name":"Paixao"},{"last_name":"Sudholt","first_name":"Dirk","full_name":"Sudholt, Dirk"},{"first_name":"Jorge","full_name":"Heredia, Jorge","last_name":"Heredia"},{"last_name":"Trubenova","orcid":"0000-0002-6873-2967","id":"42302D54-F248-11E8-B48F-1D18A9856A87","first_name":"Barbora","full_name":"Trubenova, Barbora"}],"fulldoi":"https://doi.org/10.1145/2739480.2754758","abstract":[{"lang":"eng","text":"Evolutionary algorithms (EAs) form a popular optimisation paradigm inspired by natural evolution. In recent years the field of evolutionary computation has developed a rigorous analytical theory to analyse their runtime on many illustrative problems. Here we apply this theory to a simple model of natural evolution. In the Strong Selection Weak Mutation (SSWM) evolutionary regime the time between occurrence of new mutations is much longer than the time it takes for a new beneficial mutation to take over the population. In this situation, the population only contains copies of one genotype and evolution can be modelled as a (1+1)-type process where the probability of accepting a new genotype (improvements or worsenings) depends on the change in fitness. We present an initial runtime analysis of SSWM, quantifying its performance for various parameters and investigating differences to the (1+1) EA. We show that SSWM can have a moderate advantage over the (1+1) EA at crossing fitness valleys and study an example where SSWM outperforms the (1+1) EA by taking advantage of information on the fitness gradient."}],"day":"11","arxiv":1,"publication_status":"published","conference":{"start_date":"2015-07-11","end_date":"2015-07-15","name":"GECCO: Genetic and evolutionary computation conference","location":"Madrid, Spain"},"type":"conference","publication":"Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation","citation":{"chicago":"Paixao, Tiago, Dirk Sudholt, Jorge Heredia, and Barbora Trubenova. “First Steps towards a Runtime Comparison of Natural and Artificial Evolution.” In <i>Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation</i>, 1455–62. ACM, 2015. <a href=\"https://doi.org/10.1145/2739480.2754758\">https://doi.org/10.1145/2739480.2754758</a>.","ista":"Paixao T, Sudholt D, Heredia J, Trubenova B. 2015. First steps towards a runtime comparison of natural and artificial evolution. Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation. GECCO: Genetic and evolutionary computation conference, 1455–1462.","short":"T. Paixao, D. Sudholt, J. Heredia, B. Trubenova, in:, Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation, ACM, 2015, pp. 1455–1462.","mla":"Paixao, Tiago, et al. “First Steps towards a Runtime Comparison of Natural and Artificial Evolution.” <i>Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation</i>, ACM, 2015, pp. 1455–62, doi:<a href=\"https://doi.org/10.1145/2739480.2754758\">10.1145/2739480.2754758</a>.","ama":"Paixao T, Sudholt D, Heredia J, Trubenova B. First steps towards a runtime comparison of natural and artificial evolution. In: <i>Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation</i>. ACM; 2015:1455-1462. doi:<a href=\"https://doi.org/10.1145/2739480.2754758\">10.1145/2739480.2754758</a>","ieee":"T. Paixao, D. Sudholt, J. Heredia, and B. Trubenova, “First steps towards a runtime comparison of natural and artificial evolution,” in <i>Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation</i>, Madrid, Spain, 2015, pp. 1455–1462.","apa":"Paixao, T., Sudholt, D., Heredia, J., &#38; Trubenova, B. (2015). First steps towards a runtime comparison of natural and artificial evolution. In <i>Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation</i> (pp. 1455–1462). Madrid, Spain: ACM. <a href=\"https://doi.org/10.1145/2739480.2754758\">https://doi.org/10.1145/2739480.2754758</a>"},"date_updated":"2025-09-23T08:50:33Z","doi":"10.1145/2739480.2754758","scopus_import":"1","publisher":"ACM","oa":1},{"doi":"10.1021/acs.nanolett.5b01461","date_updated":"2023-11-07T11:56:32Z","intvolume":"        15","pmid":1,"oa":1,"publisher":"ACS Publications","issue":"7","type":"journal_article","volume":15,"publication":"Nano Letters","citation":{"ieee":"B. Kick, F. M. Praetorius, H. Dietz, and D. Weuster-Botz, “Efficient production of single-stranded phage DNA as scaffolds for DNA origami,” <i>Nano Letters</i>, vol. 15, no. 7. ACS Publications, pp. 4672–4676, 2015.","apa":"Kick, B., Praetorius, F. M., Dietz, H., &#38; Weuster-Botz, D. (2015). Efficient production of single-stranded phage DNA as scaffolds for DNA origami. <i>Nano Letters</i>. ACS Publications. <a href=\"https://doi.org/10.1021/acs.nanolett.5b01461\">https://doi.org/10.1021/acs.nanolett.5b01461</a>","chicago":"Kick, B, Florian M Praetorius, H Dietz, and D Weuster-Botz. “Efficient Production of Single-Stranded Phage DNA as Scaffolds for DNA Origami.” <i>Nano Letters</i>. ACS Publications, 2015. <a href=\"https://doi.org/10.1021/acs.nanolett.5b01461\">https://doi.org/10.1021/acs.nanolett.5b01461</a>.","ama":"Kick B, Praetorius FM, Dietz H, Weuster-Botz D. Efficient production of single-stranded phage DNA as scaffolds for DNA origami. <i>Nano Letters</i>. 2015;15(7):4672-4676. doi:<a href=\"https://doi.org/10.1021/acs.nanolett.5b01461\">10.1021/acs.nanolett.5b01461</a>","mla":"Kick, B., et al. “Efficient Production of Single-Stranded Phage DNA as Scaffolds for DNA Origami.” <i>Nano Letters</i>, vol. 15, no. 7, ACS Publications, 2015, pp. 4672–76, doi:<a href=\"https://doi.org/10.1021/acs.nanolett.5b01461\">10.1021/acs.nanolett.5b01461</a>.","short":"B. Kick, F.M. Praetorius, H. Dietz, D. Weuster-Botz, Nano Letters 15 (2015) 4672–4676.","ista":"Kick B, Praetorius FM, Dietz H, Weuster-Botz D. 2015. Efficient production of single-stranded phage DNA as scaffolds for DNA origami. Nano Letters. 15(7), 4672–4676."},"abstract":[{"lang":"eng","text":"Scaffolded DNA origami enables the fabrication of a variety of complex nanostructures that promise utility in diverse fields of application, ranging from biosensing over advanced therapeutics to metamaterials. The broad applicability of DNA origami as a material beyond the level of proof-of-concept studies critically depends, among other factors, on the availability of large amounts of pure single-stranded scaffold DNA. Here, we present a method for the efficient production of M13 bacteriophage-derived genomic DNA using high-cell-density fermentation of Escherichia coli in stirred-tank bioreactors. We achieve phage titers of up to 1.6 × 1014 plaque-forming units per mL. Downstream processing yields up to 410 mg of high-quality single-stranded DNA per one liter reaction volume, thus upgrading DNA origami-based nanotechnology from the milligram to the gram scale."}],"fulldoi":"https://doi.org/10.1021/acs.nanolett.5b01461","publication_status":"published","day":"01","author":[{"last_name":"Kick","first_name":"B","full_name":"Kick, B"},{"full_name":"Praetorius, Florian M","id":"dfec9381-4341-11ee-8fd8-faa02bba7d62","first_name":"Florian M","last_name":"Praetorius"},{"last_name":"Dietz","full_name":"Dietz, H","first_name":"H"},{"last_name":"Weuster-Botz","full_name":"Weuster-Botz, D","first_name":"D"}],"article_type":"letter_note","_id":"14303","extern":"1","month":"06","language":[{"iso":"eng"}],"publication_identifier":{"eissn":["1530-6992"],"issn":["1530-6984"]},"main_file_link":[{"url":"https://doi.org/10.1021/acs.nanolett.5b01461","open_access":"1"}],"page":"4672-4676","year":"2015","status":"public","quality_controlled":"1","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","external_id":{"pmid":["26028443"]},"title":"Efficient production of single-stranded phage DNA as scaffolds for DNA origami","oa_version":"Published Version","date_published":"2015-06-01T00:00:00Z","date_created":"2023-09-06T12:52:47Z"},{"title":"Cohomology of large semiprojective hyperkähler varieties","publication_status":"published","day":"01","abstract":[{"text":"In this paper we survey geometric and arithmetic techniques to study the cohomology of semiprojective hyperkähler manifolds including toric hyperkähler varieties, Nakajima quiver varieties and moduli spaces of Higgs bundles on Riemann surfaces. The resulting formulae for their Poincaré polynomials are combinatorial and representation theoretical in nature. In particular we will look at their Betti numbers and will establish some results and state some expectations on their asymptotic shape.","lang":"eng"}],"date_created":"2018-12-11T11:52:13Z","date_published":"2015-01-01T00:00:00Z","publist_id":"5723","author":[{"last_name":"Hausel","full_name":"Tamas Hausel","first_name":"Tamas","id":"4A0666D8-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Rodríguez Villegas","first_name":"Fernando","full_name":"Rodríguez Villegas, Fernando"}],"publisher":"Societe Mathematique de France","oa":1,"month":"01","intvolume":"      2015","date_updated":"2021-01-12T06:50:59Z","extern":1,"_id":"1473","citation":{"mla":"Hausel, Tamás, and Fernando Rodríguez Villegas. “Cohomology of Large Semiprojective Hyperkähler Varieties.” <i>Asterisque</i>, vol. 2015, no. 370, Societe Mathematique de France, 2015, pp. 113–56.","ama":"Hausel T, Rodríguez Villegas F. Cohomology of large semiprojective hyperkähler varieties. <i>Asterisque</i>. 2015;2015(370):113-156.","ista":"Hausel T, Rodríguez Villegas F. 2015. Cohomology of large semiprojective hyperkähler varieties. Asterisque. 2015(370), 113–156.","short":"T. Hausel, F. Rodríguez Villegas, Asterisque 2015 (2015) 113–156.","chicago":"Hausel, Tamás, and Fernando Rodríguez Villegas. “Cohomology of Large Semiprojective Hyperkähler Varieties.” <i>Asterisque</i>. Societe Mathematique de France, 2015.","apa":"Hausel, T., &#38; Rodríguez Villegas, F. (2015). Cohomology of large semiprojective hyperkähler varieties. <i>Asterisque</i>. Societe Mathematique de France.","ieee":"T. Hausel and F. Rodríguez Villegas, “Cohomology of large semiprojective hyperkähler varieties,” <i>Asterisque</i>, vol. 2015, no. 370. Societe Mathematique de France, pp. 113–156, 2015."},"status":"public","quality_controlled":0,"year":"2015","page":"113 - 156","publication":"Asterisque","volume":2015,"type":"review","main_file_link":[{"url":"http://arxiv.org/abs/1309.4914","open_access":"1"}],"issue":"370"},{"conference":{"name":"CSF: Computer Security Foundations","location":"Verona, Italy","start_date":"2015-07-13","end_date":"2015-07-17"},"publication_status":"published","day":"04","fulldoi":"https://doi.org/10.1109/CSF.2015.11","abstract":[{"lang":"eng","text":"Cryptographic access control offers selective access to encrypted data via a combination of key management and functionality-rich cryptographic schemes, such as attribute-based encryption. Using this approach, publicly available meta-data may inadvertently leak information on the access policy that is enforced by cryptography, which renders cryptographic access control unusable in settings where this information is highly sensitive. We begin to address this problem by presenting rigorous definitions for policy privacy in cryptographic access control. For concreteness we set our results in the model of Role-Based Access Control (RBAC), where we identify and formalize several different flavors of privacy, however, our framework should serve as inspiration for other models of access control. Based on our insights we propose a new system which significantly improves on the privacy properties of state-of-the-art constructions. Our design is based on a novel type of privacy-preserving attribute-based encryption, which we introduce and show how to instantiate. We present our results in the context of a cryptographic RBAC system by Ferrara et al. (CSF'13), which uses cryptography to control read access to files, while write access is still delegated to trusted monitors. We give an extension of the construction that permits cryptographic control over write access. Our construction assumes that key management uses out-of-band channels between the policy enforcer and the users but eliminates completely the need for monitoring read/write access to the data."}],"publist_id":"5722","author":[{"last_name":"Ferrara","first_name":"Anna","full_name":"Ferrara, Anna"},{"last_name":"Fuchsbauer","full_name":"Fuchsbauer, Georg","id":"46B4C3EE-F248-11E8-B48F-1D18A9856A87","first_name":"Georg"},{"full_name":"Liu, Bin","first_name":"Bin","last_name":"Liu"},{"last_name":"Warinschi","first_name":"Bogdan","full_name":"Warinschi, Bogdan"}],"publisher":"IEEE","scopus_import":"1","oa":1,"date_updated":"2025-09-23T09:50:52Z","doi":"10.1109/CSF.2015.11","citation":{"apa":"Ferrara, A., Fuchsbauer, G., Liu, B., &#38; Warinschi, B. (2015). Policy privacy in cryptographic access control (pp. 46–60). Presented at the CSF: Computer Security Foundations, Verona, Italy: IEEE. <a href=\"https://doi.org/10.1109/CSF.2015.11\">https://doi.org/10.1109/CSF.2015.11</a>","ieee":"A. Ferrara, G. Fuchsbauer, B. Liu, and B. Warinschi, “Policy privacy in cryptographic access control,” presented at the CSF: Computer Security Foundations, Verona, Italy, 2015, pp. 46–60.","mla":"Ferrara, Anna, et al. <i>Policy Privacy in Cryptographic Access Control</i>. IEEE, 2015, pp. 46–60, doi:<a href=\"https://doi.org/10.1109/CSF.2015.11\">10.1109/CSF.2015.11</a>.","ama":"Ferrara A, Fuchsbauer G, Liu B, Warinschi B. Policy privacy in cryptographic access control. In: IEEE; 2015:46-60. doi:<a href=\"https://doi.org/10.1109/CSF.2015.11\">10.1109/CSF.2015.11</a>","ista":"Ferrara A, Fuchsbauer G, Liu B, Warinschi B. 2015. Policy privacy in cryptographic access control. CSF: Computer Security Foundations, 46–60.","short":"A. Ferrara, G. Fuchsbauer, B. Liu, B. Warinschi, in:, IEEE, 2015, pp. 46–60.","chicago":"Ferrara, Anna, Georg Fuchsbauer, Bin Liu, and Bogdan Warinschi. “Policy Privacy in Cryptographic Access Control,” 46–60. IEEE, 2015. <a href=\"https://doi.org/10.1109/CSF.2015.11\">https://doi.org/10.1109/CSF.2015.11</a>."},"type":"conference","title":"Policy privacy in cryptographic access control","oa_version":"Submitted Version","external_id":{"isi":["000380428500004"]},"isi":1,"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","article_processing_charge":"No","date_created":"2018-12-11T11:52:14Z","date_published":"2015-09-04T00:00:00Z","department":[{"_id":"KrPi"}],"language":[{"iso":"eng"}],"month":"09","ec_funded":1,"_id":"1474","project":[{"name":"Provable Security for Physical Cryptography","call_identifier":"FP7","_id":"258C570E-B435-11E9-9278-68D0E5697425","grant_number":"259668"}],"quality_controlled":"1","status":"public","year":"2015","page":"46-60","main_file_link":[{"open_access":"1","url":"http://epubs.surrey.ac.uk/808055/"}]},{"language":[{"iso":"eng"}],"month":"01","ec_funded":1,"_id":"1481","quality_controlled":"1","status":"public","year":"2015","project":[{"grant_number":"P 23499-N23","call_identifier":"FWF","_id":"2584A770-B435-11E9-9278-68D0E5697425","name":"Modern Graph Algorithmic Techniques in Formal Verification"},{"name":"Rigorous Systems Engineering","call_identifier":"FWF","_id":"25832EC2-B435-11E9-9278-68D0E5697425","grant_number":"S 11407_N23"},{"grant_number":"279307","call_identifier":"FP7","_id":"2581B60A-B435-11E9-9278-68D0E5697425","name":"Quantitative Graph Games: Theory and Applications"},{"_id":"2587B514-B435-11E9-9278-68D0E5697425","name":"Microsoft Research Faculty Fellowship"}],"page":"745 - 752","main_file_link":[{"open_access":"1","url":"https://www.aaai.org/ocs/index.php/AAAI/AAAI15/paper/download/9523/9300"}],"related_material":{"record":[{"id":"5410","status":"public","relation":"earlier_version"}]},"oa_version":"None","acknowledgement":"A Technical Report of this paper is available at: \r\nhttps://repository.ist.ac.at/id/eprint/146.\r\n","title":"Automatic generation of alternative starting positions for simple traditional board games","external_id":{"arxiv":["1411.4023"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","date_created":"2018-12-11T11:52:16Z","date_published":"2015-01-01T00:00:00Z","department":[{"_id":"KrCh"}],"scopus_import":"1","publisher":"AAAI Press","oa":1,"date_updated":"2025-05-19T11:10:17Z","intvolume":"         2","citation":{"ama":"Ahmed U, Chatterjee K, Gulwani S. Automatic generation of alternative starting positions for simple traditional board games. In: <i>Proceedings of the Twenty-Ninth AAAI Conference on Artificial Intelligence</i>. Vol 2. AAAI Press; 2015:745-752.","mla":"Ahmed, Umair, et al. “Automatic Generation of Alternative Starting Positions for Simple Traditional Board Games.” <i>Proceedings of the Twenty-Ninth AAAI Conference on Artificial Intelligence</i>, vol. 2, AAAI Press, 2015, pp. 745–52.","ista":"Ahmed U, Chatterjee K, Gulwani S. 2015. Automatic generation of alternative starting positions for simple traditional board games. Proceedings of the Twenty-Ninth AAAI Conference on Artificial Intelligence. AAAI: Conference on Artificial Intelligence vol. 2, 745–752.","short":"U. Ahmed, K. Chatterjee, S. Gulwani, in:, Proceedings of the Twenty-Ninth AAAI Conference on Artificial Intelligence, AAAI Press, 2015, pp. 745–752.","chicago":"Ahmed, Umair, Krishnendu Chatterjee, and Sumit Gulwani. “Automatic Generation of Alternative Starting Positions for Simple Traditional Board Games.” In <i>Proceedings of the Twenty-Ninth AAAI Conference on Artificial Intelligence</i>, 2:745–52. AAAI Press, 2015.","apa":"Ahmed, U., Chatterjee, K., &#38; Gulwani, S. (2015). Automatic generation of alternative starting positions for simple traditional board games. In <i>Proceedings of the Twenty-Ninth AAAI Conference on Artificial Intelligence</i> (Vol. 2, pp. 745–752). Austin, TX, USA: AAAI Press.","ieee":"U. Ahmed, K. Chatterjee, and S. Gulwani, “Automatic generation of alternative starting positions for simple traditional board games,” in <i>Proceedings of the Twenty-Ninth AAAI Conference on Artificial Intelligence</i>, Austin, TX, USA, 2015, vol. 2, pp. 745–752."},"volume":2,"publication":"Proceedings of the Twenty-Ninth AAAI Conference on Artificial Intelligence","type":"conference","day":"01","publication_status":"published","arxiv":1,"conference":{"location":"Austin, TX, USA","name":"AAAI: Conference on Artificial Intelligence","end_date":"2015-01-30","start_date":"2015-01-25"},"abstract":[{"lang":"eng","text":"Simple board games, like Tic-Tac-Toe and CONNECT-4, play an important role not only in the development of mathematical and logical skills, but also in the emotional and social development. In this paper, we address the problem of generating targeted starting positions for such games. This can facilitate new approaches for bringing novice players to mastery, and also leads to discovery of interesting game variants. We present an approach that generates starting states of varying hardness levels for player 1 in a two-player board game, given rules of the board game, the desired number of steps required for player 1 to win, and the expertise levels of the two players. Our approach leverages symbolic methods and iterative simulation to efficiently search the extremely large state space. We present experimental results that include discovery of states of varying hardness levels for several simple grid-based board games. The presence of such states for standard game variants like 4×4 Tic-Tac-Toe opens up new games to be played that have never been played as the default start state is heavily biased. "}],"publist_id":"5713","author":[{"last_name":"Ahmed","full_name":"Ahmed, Umair","first_name":"Umair"},{"id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","full_name":"Chatterjee, Krishnendu","first_name":"Krishnendu","orcid":"0000-0002-4561-241X","last_name":"Chatterjee"},{"full_name":"Gulwani, Sumit","first_name":"Sumit","last_name":"Gulwani"}]},{"department":[{"_id":"HeEd"}],"date_published":"2015-10-14T00:00:00Z","date_created":"2018-12-11T11:52:17Z","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","external_id":{"arxiv":["1412.6821"]},"oa_version":"Preprint","title":"A stable multi-scale kernel for topological machine learning","main_file_link":[{"open_access":"1","url":"http://arxiv.org/abs/1412.6821"}],"page":"4741 - 4748","year":"2015","status":"public","_id":"1483","month":"10","publication_identifier":{"eisbn":["978-1-4673-6964-0 "]},"language":[{"iso":"eng"}],"author":[{"first_name":"Jan","id":"4505473A-F248-11E8-B48F-1D18A9856A87","full_name":"Reininghaus, Jan","last_name":"Reininghaus"},{"last_name":"Huber","full_name":"Huber, Stefan","first_name":"Stefan","id":"4700A070-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8871-5814"},{"last_name":"Bauer","full_name":"Bauer, Ulrich","id":"2ADD483A-F248-11E8-B48F-1D18A9856A87","first_name":"Ulrich","orcid":"0000-0002-9683-0724"},{"last_name":"Kwitt","first_name":"Roland","full_name":"Kwitt, Roland"}],"publist_id":"5709","abstract":[{"text":"Topological data analysis offers a rich source of valuable information to study vision problems. Yet, so far we lack a theoretically sound connection to popular kernel-based learning techniques, such as kernel SVMs or kernel PCA. In this work, we establish such a connection by designing a multi-scale kernel for persistence diagrams, a stable summary representation of topological features in data. We show that this kernel is positive definite and prove its stability with respect to the 1-Wasserstein distance. Experiments on two benchmark datasets for 3D shape classification/retrieval and texture recognition show considerable performance gains of the proposed method compared to an alternative approach that is based on the recently introduced persistence landscapes.","lang":"eng"}],"fulldoi":"https://doi.org/10.1109/CVPR.2015.7299106","publication_status":"published","arxiv":1,"day":"14","conference":{"start_date":"2015-06-07","end_date":"2015-06-12","name":"CVPR: Computer Vision and Pattern Recognition","location":"Boston, MA, USA"},"type":"conference","citation":{"ieee":"J. Reininghaus, S. Huber, U. Bauer, and R. Kwitt, “A stable multi-scale kernel for topological machine learning,” presented at the CVPR: Computer Vision and Pattern Recognition, Boston, MA, USA, 2015, pp. 4741–4748.","apa":"Reininghaus, J., Huber, S., Bauer, U., &#38; Kwitt, R. (2015). A stable multi-scale kernel for topological machine learning (pp. 4741–4748). Presented at the CVPR: Computer Vision and Pattern Recognition, Boston, MA, USA: IEEE. <a href=\"https://doi.org/10.1109/CVPR.2015.7299106\">https://doi.org/10.1109/CVPR.2015.7299106</a>","chicago":"Reininghaus, Jan, Stefan Huber, Ulrich Bauer, and Roland Kwitt. “A Stable Multi-Scale Kernel for Topological Machine Learning,” 4741–48. IEEE, 2015. <a href=\"https://doi.org/10.1109/CVPR.2015.7299106\">https://doi.org/10.1109/CVPR.2015.7299106</a>.","ama":"Reininghaus J, Huber S, Bauer U, Kwitt R. A stable multi-scale kernel for topological machine learning. In: IEEE; 2015:4741-4748. doi:<a href=\"https://doi.org/10.1109/CVPR.2015.7299106\">10.1109/CVPR.2015.7299106</a>","mla":"Reininghaus, Jan, et al. <i>A Stable Multi-Scale Kernel for Topological Machine Learning</i>. IEEE, 2015, pp. 4741–48, doi:<a href=\"https://doi.org/10.1109/CVPR.2015.7299106\">10.1109/CVPR.2015.7299106</a>.","ista":"Reininghaus J, Huber S, Bauer U, Kwitt R. 2015. A stable multi-scale kernel for topological machine learning. CVPR: Computer Vision and Pattern Recognition, 4741–4748.","short":"J. Reininghaus, S. Huber, U. Bauer, R. Kwitt, in:, IEEE, 2015, pp. 4741–4748."},"doi":"10.1109/CVPR.2015.7299106","date_updated":"2025-06-11T06:37:43Z","oa":1,"publisher":"IEEE","scopus_import":"1"},{"publist_id":"5684","author":[{"id":"3FB178DA-F248-11E8-B48F-1D18A9856A87","first_name":"Herbert","full_name":"Edelsbrunner, Herbert","orcid":"0000-0002-9823-6833","last_name":"Edelsbrunner"},{"full_name":"Iglesias Ham, Mabel","id":"41B58C0C-F248-11E8-B48F-1D18A9856A87","first_name":"Mabel","last_name":"Iglesias Ham"},{"full_name":"Kurlin, Vitaliy","first_name":"Vitaliy","last_name":"Kurlin"}],"conference":{"name":"CCCG: Canadian Conference on Computational Geometry","location":"Ontario, Canada","start_date":"2015-08-10","end_date":"2015-08-12"},"day":"01","arxiv":1,"publication_status":"published","abstract":[{"text":"Motivated by biological questions, we study configurations of equal-sized disks in the Euclidean plane that neither pack nor cover. Measuring the quality by the probability that a random point lies in exactly one disk, we show that the regular hexagonal grid gives the maximum among lattice configurations. ","lang":"eng"}],"citation":{"ista":"Edelsbrunner H, Iglesias Ham M, Kurlin V. 2015. Relaxed disk packing. Proceedings of the 27th Canadian Conference on Computational Geometry. CCCG: Canadian Conference on Computational Geometry vol. 2015–August, 128–135.","short":"H. Edelsbrunner, M. Iglesias Ham, V. Kurlin, in:, Proceedings of the 27th Canadian Conference on Computational Geometry, Queen’s University, 2015, pp. 128–135.","mla":"Edelsbrunner, Herbert, et al. “Relaxed Disk Packing.” <i>Proceedings of the 27th Canadian Conference on Computational Geometry</i>, vol. 2015–August, Queen’s University, 2015, pp. 128–35.","ama":"Edelsbrunner H, Iglesias Ham M, Kurlin V. Relaxed disk packing. In: <i>Proceedings of the 27th Canadian Conference on Computational Geometry</i>. Vol 2015-August. Queen’s University; 2015:128-135.","chicago":"Edelsbrunner, Herbert, Mabel Iglesias Ham, and Vitaliy Kurlin. “Relaxed Disk Packing.” In <i>Proceedings of the 27th Canadian Conference on Computational Geometry</i>, 2015–August:128–35. Queen’s University, 2015.","apa":"Edelsbrunner, H., Iglesias Ham, M., &#38; Kurlin, V. (2015). Relaxed disk packing. In <i>Proceedings of the 27th Canadian Conference on Computational Geometry</i> (Vol. 2015–August, pp. 128–135). Ontario, Canada: Queen’s University.","ieee":"H. Edelsbrunner, M. Iglesias Ham, and V. Kurlin, “Relaxed disk packing,” in <i>Proceedings of the 27th Canadian Conference on Computational Geometry</i>, Ontario, Canada, 2015, vol. 2015–August, pp. 128–135."},"volume":"2015-August","publication":"Proceedings of the 27th Canadian Conference on Computational Geometry","type":"conference","publisher":"Queen's University","scopus_import":"1","oa":1,"date_updated":"2025-06-11T06:38:01Z","date_created":"2018-12-11T11:52:21Z","date_published":"2015-08-01T00:00:00Z","department":[{"_id":"HeEd"}],"oa_version":"Submitted Version","title":"Relaxed disk packing","external_id":{"arxiv":["1505.03402"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","year":"2015","quality_controlled":"1","status":"public","project":[{"name":"Topological Complex Systems","grant_number":"318493","_id":"255D761E-B435-11E9-9278-68D0E5697425","call_identifier":"FP7"}],"page":"128-135","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1505.03402"}],"language":[{"iso":"eng"}],"month":"08","ec_funded":1,"_id":"1495"}]