[{"issue":"5","doi":"10.1016/j.cell.2013.05.008","quality_controlled":"1","oa_version":"None","acknowledgement":"C.-P.H. is supported by the Institute of Science and Technology Austria and grants from the Deutsche Forschungsgemeinschaft (DFG) and Fonds zur Förderung der wissenschaftlichen Forschung (FWF).","month":"05","volume":153,"_id":"2833","publist_id":"3966","intvolume":"       153","year":"2013","citation":{"chicago":"Heisenberg, Carl-Philipp J, and Yohanns Bellaïche. “Forces in Tissue Morphogenesis and Patterning.” <i>Cell</i>. Cell Press, 2013. <a href=\"https://doi.org/10.1016/j.cell.2013.05.008\">https://doi.org/10.1016/j.cell.2013.05.008</a>.","ista":"Heisenberg C-PJ, Bellaïche Y. 2013. Forces in tissue morphogenesis and patterning. Cell. 153(5), 948–962.","ieee":"C.-P. J. Heisenberg and Y. Bellaïche, “Forces in tissue morphogenesis and patterning,” <i>Cell</i>, vol. 153, no. 5. Cell Press, pp. 948–962, 2013.","ama":"Heisenberg C-PJ, Bellaïche Y. Forces in tissue morphogenesis and patterning. <i>Cell</i>. 2013;153(5):948-962. doi:<a href=\"https://doi.org/10.1016/j.cell.2013.05.008\">10.1016/j.cell.2013.05.008</a>","short":"C.-P.J. Heisenberg, Y. Bellaïche, Cell 153 (2013) 948–962.","apa":"Heisenberg, C.-P. J., &#38; Bellaïche, Y. (2013). Forces in tissue morphogenesis and patterning. <i>Cell</i>. Cell Press. <a href=\"https://doi.org/10.1016/j.cell.2013.05.008\">https://doi.org/10.1016/j.cell.2013.05.008</a>","mla":"Heisenberg, Carl-Philipp J., and Yohanns Bellaïche. “Forces in Tissue Morphogenesis and Patterning.” <i>Cell</i>, vol. 153, no. 5, Cell Press, 2013, pp. 948–62, doi:<a href=\"https://doi.org/10.1016/j.cell.2013.05.008\">10.1016/j.cell.2013.05.008</a>."},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","day":"23","date_updated":"2025-09-29T13:49:30Z","isi":1,"status":"public","date_created":"2018-12-11T11:59:50Z","article_processing_charge":"No","page":"948 - 962","title":"Forces in tissue morphogenesis and patterning","publication":"Cell","corr_author":"1","language":[{"iso":"eng"}],"external_id":{"isi":["000319456800005"]},"scopus_import":"1","publisher":"Cell Press","type":"journal_article","abstract":[{"text":"During development, mechanical forces cause changes in size, shape, number, position, and gene expression of cells. They are therefore integral to any morphogenetic processes. Force generation by actin-myosin networks and force transmission through adhesive complexes are two self-organizing phenomena driving tissue morphogenesis. Coordination and integration of forces by long-range force transmission and mechanosensing of cells within tissues produce large-scale tissue shape changes. Extrinsic mechanical forces also control tissue patterning by modulating cell fate specification and differentiation. Thus, the interplay between tissue mechanics and biochemical signaling orchestrates tissue morphogenesis and patterning in development.","lang":"eng"}],"date_published":"2013-05-23T00:00:00Z","author":[{"full_name":"Heisenberg, Carl-Philipp J","last_name":"Heisenberg","orcid":"0000-0002-0912-4566","first_name":"Carl-Philipp J","id":"39427864-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Bellaïche, Yohanns","last_name":"Bellaïche","first_name":"Yohanns"}],"department":[{"_id":"CaHe"}],"publication_status":"published"},{"date_created":"2018-12-11T11:59:50Z","article_processing_charge":"No","status":"public","title":"Streamwise-localized solutions at the onset of turbulence in pipe flow","publication":"Physical Review Letters","arxiv":1,"language":[{"iso":"eng"}],"project":[{"grant_number":"306589","_id":"25152F3A-B435-11E9-9278-68D0E5697425","name":"Decoding the complexity of turbulence at its origin","call_identifier":"FP7"}],"article_number":"224502","external_id":{"isi":["000319682200016"],"arxiv":["1212.0230"]},"main_file_link":[{"url":"http://arxiv.org/abs/1212.0230","open_access":"1"}],"type":"journal_article","abstract":[{"lang":"eng","text":"Although the equations governing fluid flow are well known, there are no analytical expressions that describe the complexity of turbulent motion. A recent proposition is that in analogy to low dimensional chaotic systems, turbulence is organized around unstable solutions of the governing equations which provide the building blocks of the disordered dynamics. We report the discovery of periodic solutions which just like intermittent turbulence are spatially localized and show that turbulent transients arise from one such solution branch."}],"date_published":"2013-05-29T00:00:00Z","scopus_import":"1","publisher":"American Physical Society","author":[{"last_name":"Avila","full_name":"Avila, Marc","first_name":"Marc"},{"full_name":"Mellibovsky, Fernando","last_name":"Mellibovsky","first_name":"Fernando"},{"last_name":"Roland","full_name":"Roland, Nicolas","first_name":"Nicolas"},{"first_name":"Björn","id":"3A374330-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-2057-2754","last_name":"Hof","full_name":"Hof, Björn"}],"publication_status":"published","department":[{"_id":"BjHo"}],"oa":1,"issue":"22","doi":"10.1103/PhysRevLett.110.224502","oa_version":"Preprint","quality_controlled":"1","month":"05","volume":110,"_id":"2834","intvolume":"       110","publist_id":"3965","ec_funded":1,"year":"2013","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","citation":{"mla":"Avila, Marc, et al. “Streamwise-Localized Solutions at the Onset of Turbulence in Pipe Flow.” <i>Physical Review Letters</i>, vol. 110, no. 22, 224502, American Physical Society, 2013, doi:<a href=\"https://doi.org/10.1103/PhysRevLett.110.224502\">10.1103/PhysRevLett.110.224502</a>.","apa":"Avila, M., Mellibovsky, F., Roland, N., &#38; Hof, B. (2013). Streamwise-localized solutions at the onset of turbulence in pipe flow. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevLett.110.224502\">https://doi.org/10.1103/PhysRevLett.110.224502</a>","short":"M. Avila, F. Mellibovsky, N. Roland, B. Hof, Physical Review Letters 110 (2013).","ieee":"M. Avila, F. Mellibovsky, N. Roland, and B. Hof, “Streamwise-localized solutions at the onset of turbulence in pipe flow,” <i>Physical Review Letters</i>, vol. 110, no. 22. American Physical Society, 2013.","ama":"Avila M, Mellibovsky F, Roland N, Hof B. Streamwise-localized solutions at the onset of turbulence in pipe flow. <i>Physical Review Letters</i>. 2013;110(22). doi:<a href=\"https://doi.org/10.1103/PhysRevLett.110.224502\">10.1103/PhysRevLett.110.224502</a>","chicago":"Avila, Marc, Fernando Mellibovsky, Nicolas Roland, and Björn Hof. “Streamwise-Localized Solutions at the Onset of Turbulence in Pipe Flow.” <i>Physical Review Letters</i>. American Physical Society, 2013. <a href=\"https://doi.org/10.1103/PhysRevLett.110.224502\">https://doi.org/10.1103/PhysRevLett.110.224502</a>.","ista":"Avila M, Mellibovsky F, Roland N, Hof B. 2013. Streamwise-localized solutions at the onset of turbulence in pipe flow. Physical Review Letters. 110(22), 224502."},"isi":1,"day":"29","date_updated":"2025-09-29T13:48:57Z"},{"author":[{"first_name":"Hong","full_name":"Yu, Hong","last_name":"Yu"},{"last_name":"Karampelias","full_name":"Karampelias, Michael","first_name":"Michael"},{"full_name":"Robert, Stéphanie","last_name":"Robert","first_name":"Stéphanie"},{"full_name":"Peer, Wendy","last_name":"Peer","first_name":"Wendy"},{"full_name":"Swarup, Ranjan","last_name":"Swarup","first_name":"Ranjan"},{"first_name":"Songqing","full_name":"Ye, Songqing","last_name":"Ye"},{"first_name":"Lei","full_name":"Ge, Lei","last_name":"Ge"},{"first_name":"Jerry","last_name":"Cohen","full_name":"Cohen, Jerry"},{"last_name":"Murphy","full_name":"Murphy, Angus","first_name":"Angus"},{"id":"4159519E-F248-11E8-B48F-1D18A9856A87","first_name":"Jirí","orcid":"0000-0002-8302-7596","last_name":"Friml","full_name":"Friml, Jirí"},{"last_name":"Estelle","full_name":"Estelle, Mark","first_name":"Mark"}],"publication_status":"published","department":[{"_id":"JiFr"}],"oa":1,"type":"journal_article","abstract":[{"text":"The phytohormone auxin regulates virtually every aspect of plant development. To identify new genes involved in auxin activity, a genetic screen was performed for Arabidopsis (Arabidopsis thaliana) mutants with altered expression of the auxin-responsive reporter DR5rev:GFP. One of the mutants recovered in the screen, designated as weak auxin response3 (wxr3), exhibits much lower DR5rev:GFP expression when treated with the synthetic auxin 2,4-dichlorophenoxyacetic acid and displays severe defects in root development. The wxr3 mutant decreases polar auxin transport and results in a disruption of the asymmetric auxin distribution. The levels of the auxin transporters AUXIN1 and PIN-FORMED are dramatically reduced in the wxr3 root tip. Molecular analyses demonstrate that WXR3 is ROOT ULTRAVIOLET B-SENSITIVE1 (RUS1), a member of the conserved Domain of Unknown Function647 protein family found in diverse eukaryotic organisms. Our data suggest that RUS1/WXR3 plays an essential role in the regulation of polar auxin transport by maintaining the proper level of auxin transporters on the plasma membrane.","lang":"eng"}],"date_published":"2013-06-01T00:00:00Z","scopus_import":"1","publisher":"American Society of Plant Biologists","external_id":{"pmid":["23580592"],"isi":["000319819900034"]},"main_file_link":[{"open_access":"1","url":"http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3668084/"}],"language":[{"iso":"eng"}],"title":"Root ultraviolet b-sensitive1/weak auxin response3 is essential for polar auxin transport in arabidopsis","publication":"Plant Physiology","article_processing_charge":"No","date_created":"2018-12-11T11:59:51Z","status":"public","pmid":1,"page":"965 - 976","isi":1,"day":"01","date_updated":"2025-09-29T13:48:15Z","citation":{"mla":"Yu, Hong, et al. “Root Ultraviolet B-Sensitive1/Weak Auxin Response3 Is Essential for Polar Auxin Transport in Arabidopsis.” <i>Plant Physiology</i>, vol. 162, no. 2, American Society of Plant Biologists, 2013, pp. 965–76, doi:<a href=\"https://doi.org/10.1104/pp.113.217018\">10.1104/pp.113.217018</a>.","apa":"Yu, H., Karampelias, M., Robert, S., Peer, W., Swarup, R., Ye, S., … Estelle, M. (2013). Root ultraviolet b-sensitive1/weak auxin response3 is essential for polar auxin transport in arabidopsis. <i>Plant Physiology</i>. American Society of Plant Biologists. <a href=\"https://doi.org/10.1104/pp.113.217018\">https://doi.org/10.1104/pp.113.217018</a>","short":"H. Yu, M. Karampelias, S. Robert, W. Peer, R. Swarup, S. Ye, L. Ge, J. Cohen, A. Murphy, J. Friml, M. Estelle, Plant Physiology 162 (2013) 965–976.","chicago":"Yu, Hong, Michael Karampelias, Stéphanie Robert, Wendy Peer, Ranjan Swarup, Songqing Ye, Lei Ge, et al. “Root Ultraviolet B-Sensitive1/Weak Auxin Response3 Is Essential for Polar Auxin Transport in Arabidopsis.” <i>Plant Physiology</i>. American Society of Plant Biologists, 2013. <a href=\"https://doi.org/10.1104/pp.113.217018\">https://doi.org/10.1104/pp.113.217018</a>.","ieee":"H. Yu <i>et al.</i>, “Root ultraviolet b-sensitive1/weak auxin response3 is essential for polar auxin transport in arabidopsis,” <i>Plant Physiology</i>, vol. 162, no. 2. American Society of Plant Biologists, pp. 965–976, 2013.","ama":"Yu H, Karampelias M, Robert S, et al. Root ultraviolet b-sensitive1/weak auxin response3 is essential for polar auxin transport in arabidopsis. <i>Plant Physiology</i>. 2013;162(2):965-976. doi:<a href=\"https://doi.org/10.1104/pp.113.217018\">10.1104/pp.113.217018</a>","ista":"Yu H, Karampelias M, Robert S, Peer W, Swarup R, Ye S, Ge L, Cohen J, Murphy A, Friml J, Estelle M. 2013. Root ultraviolet b-sensitive1/weak auxin response3 is essential for polar auxin transport in arabidopsis. Plant Physiology. 162(2), 965–976."},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","year":"2013","_id":"2835","intvolume":"       162","publist_id":"3964","month":"06","volume":162,"doi":"10.1104/pp.113.217018","oa_version":"Submitted Version","quality_controlled":"1","issue":"2"},{"department":[{"_id":"KrCh"}],"publication_status":"published","oa":1,"author":[{"last_name":"Chatterjee","orcid":"0000-0002-4561-241X","full_name":"Chatterjee, Krishnendu","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","first_name":"Krishnendu"},{"full_name":"Raman, Vishwanath","last_name":"Raman","first_name":"Vishwanath"}],"abstract":[{"lang":"eng","text":"We study the automatic synthesis of fair non-repudiation protocols, a class of fair exchange protocols, used for digital contract signing. First, we show how to specify the objectives of the participating agents and the trusted third party as path formulas in linear temporal logic and prove that the satisfaction of these objectives imply fairness; a property required of fair exchange protocols. We then show that weak (co-operative) co-synthesis and classical (strictly competitive) co-synthesis fail, whereas assume-guarantee synthesis (AGS) succeeds. We demonstrate the success of AGS as follows: (a) any solution of AGS is attack-free; no subset of participants can violate the objectives of the other participants; (b) the Asokan-Shoup-Waidner certified mail protocol that has known vulnerabilities is not a solution of AGS; (c) the Kremer-Markowitch non-repudiation protocol is a solution of AGS; and (d) AGS presents a new and symmetric fair non-repudiation protocol that is attack-free. To our knowledge this is the first application of synthesis to fair non-repudiation protocols, and our results show how synthesis can both automatically discover vulnerabilities in protocols and generate correct protocols. The solution to AGS can be computed efficiently as the secure equilibrium solution of three-player graph games. "}],"date_published":"2013-07-04T00:00:00Z","type":"journal_article","publisher":"Springer","scopus_import":"1","main_file_link":[{"url":"http://arxiv.org/abs/1004.2697","open_access":"1"}],"external_id":{"arxiv":["1004.2697"],"isi":["000339105100007"]},"project":[{"name":"Modern Graph Algorithmic Techniques in Formal Verification","_id":"2584A770-B435-11E9-9278-68D0E5697425","grant_number":"P 23499-N23","call_identifier":"FWF"},{"name":"Game Theory","_id":"25863FF4-B435-11E9-9278-68D0E5697425","grant_number":"S11407","call_identifier":"FWF"},{"call_identifier":"FP7","_id":"2581B60A-B435-11E9-9278-68D0E5697425","name":"Quantitative Graph Games: Theory and Applications","grant_number":"279307"},{"_id":"2587B514-B435-11E9-9278-68D0E5697425","name":"Microsoft Research Faculty Fellowship"}],"language":[{"iso":"eng"}],"arxiv":1,"publication":"Formal Aspects of Computing","title":"Assume-guarantee synthesis for digital contract signing","page":"825 - 859","article_processing_charge":"No","date_created":"2018-12-11T11:59:51Z","status":"public","isi":1,"day":"04","date_updated":"2025-09-29T13:47:26Z","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","citation":{"mla":"Chatterjee, Krishnendu, and Vishwanath Raman. “Assume-Guarantee Synthesis for Digital Contract Signing.” <i>Formal Aspects of Computing</i>, vol. 26, no. 4, Springer, 2013, pp. 825–59, doi:<a href=\"https://doi.org/10.1007/s00165-013-0283-6\">10.1007/s00165-013-0283-6</a>.","apa":"Chatterjee, K., &#38; Raman, V. (2013). Assume-guarantee synthesis for digital contract signing. <i>Formal Aspects of Computing</i>. Springer. <a href=\"https://doi.org/10.1007/s00165-013-0283-6\">https://doi.org/10.1007/s00165-013-0283-6</a>","short":"K. Chatterjee, V. Raman, Formal Aspects of Computing 26 (2013) 825–859.","ieee":"K. Chatterjee and V. Raman, “Assume-guarantee synthesis for digital contract signing,” <i>Formal Aspects of Computing</i>, vol. 26, no. 4. Springer, pp. 825–859, 2013.","chicago":"Chatterjee, Krishnendu, and Vishwanath Raman. “Assume-Guarantee Synthesis for Digital Contract Signing.” <i>Formal Aspects of Computing</i>. Springer, 2013. <a href=\"https://doi.org/10.1007/s00165-013-0283-6\">https://doi.org/10.1007/s00165-013-0283-6</a>.","ama":"Chatterjee K, Raman V. Assume-guarantee synthesis for digital contract signing. <i>Formal Aspects of Computing</i>. 2013;26(4):825-859. doi:<a href=\"https://doi.org/10.1007/s00165-013-0283-6\">10.1007/s00165-013-0283-6</a>","ista":"Chatterjee K, Raman V. 2013. Assume-guarantee synthesis for digital contract signing. Formal Aspects of Computing. 26(4), 825–859."},"ec_funded":1,"year":"2013","intvolume":"        26","publist_id":"3963","_id":"2836","volume":26,"month":"07","oa_version":"Preprint","quality_controlled":"1","doi":"10.1007/s00165-013-0283-6","issue":"4"},{"publication":"Electronic Journal of Probability","title":"The local semicircle law for a general class of random matrices","page":"1-58","status":"public","date_created":"2018-12-11T11:59:51Z","article_processing_charge":"No","language":[{"iso":"eng"}],"file":[{"relation":"main_file","date_created":"2018-12-12T10:15:46Z","file_size":651497,"access_level":"open_access","file_id":"5169","file_name":"IST-2016-406-v1+1_2473-13759-1-PB.pdf","checksum":"aac9e52a00cb2f5149dc9e362b5ccf44","content_type":"application/pdf","creator":"system","date_updated":"2020-07-14T12:45:50Z"}],"external_id":{"isi":["000319561600001"]},"oa":1,"file_date_updated":"2020-07-14T12:45:50Z","publication_status":"published","department":[{"_id":"LaEr"}],"author":[{"first_name":"László","id":"4DBD5372-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5366-9603","last_name":"Erdös","full_name":"Erdös, László"},{"full_name":"Knowles, Antti","last_name":"Knowles","first_name":"Antti"},{"first_name":"Horng","full_name":"Yau, Horng","last_name":"Yau"},{"first_name":"Jun","last_name":"Yin","full_name":"Yin, Jun"}],"publisher":"Institute of Mathematical Statistics","scopus_import":"1","type":"journal_article","abstract":[{"lang":"eng","text":"We consider a general class of N × N random matrices whose entries hij are independent up to a symmetry constraint, but not necessarily identically distributed. Our main result is a local semicircle law which improves previous results [17] both in the bulk and at the edge. The error bounds are given in terms of the basic small parameter of the model, maxi,j E|hij|2. As a consequence, we prove the universality of the local n-point correlation functions in the bulk spectrum for a class of matrices whose entries do not have comparable variances, including random band matrices with band width W ≫N1-εn with some εn &gt; 0 and with a negligible mean-field component. In addition, we provide a coherent and pedagogical proof of the local semicircle law, streamlining and strengthening previous arguments from [17, 19, 6]."}],"date_published":"2013-05-29T00:00:00Z","ddc":["530"],"quality_controlled":"1","oa_version":"Published Version","doi":"10.1214/EJP.v18-2473","issue":"59","has_accepted_license":"1","volume":18,"month":"05","pubrep_id":"406","year":"2013","publist_id":"3962","intvolume":"        18","_id":"2837","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"day":"29","date_updated":"2025-09-29T13:46:52Z","isi":1,"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","citation":{"mla":"Erdös, László, et al. “The Local Semicircle Law for a General Class of Random Matrices.” <i>Electronic Journal of Probability</i>, vol. 18, no. 59, Institute of Mathematical Statistics, 2013, pp. 1–58, doi:<a href=\"https://doi.org/10.1214/EJP.v18-2473\">10.1214/EJP.v18-2473</a>.","apa":"Erdös, L., Knowles, A., Yau, H., &#38; Yin, J. (2013). The local semicircle law for a general class of random matrices. <i>Electronic Journal of Probability</i>. Institute of Mathematical Statistics. <a href=\"https://doi.org/10.1214/EJP.v18-2473\">https://doi.org/10.1214/EJP.v18-2473</a>","short":"L. Erdös, A. Knowles, H. Yau, J. Yin, Electronic Journal of Probability 18 (2013) 1–58.","ieee":"L. Erdös, A. Knowles, H. Yau, and J. Yin, “The local semicircle law for a general class of random matrices,” <i>Electronic Journal of Probability</i>, vol. 18, no. 59. Institute of Mathematical Statistics, pp. 1–58, 2013.","ama":"Erdös L, Knowles A, Yau H, Yin J. The local semicircle law for a general class of random matrices. <i>Electronic Journal of Probability</i>. 2013;18(59):1-58. doi:<a href=\"https://doi.org/10.1214/EJP.v18-2473\">10.1214/EJP.v18-2473</a>","chicago":"Erdös, László, Antti Knowles, Horng Yau, and Jun Yin. “The Local Semicircle Law for a General Class of Random Matrices.” <i>Electronic Journal of Probability</i>. Institute of Mathematical Statistics, 2013. <a href=\"https://doi.org/10.1214/EJP.v18-2473\">https://doi.org/10.1214/EJP.v18-2473</a>.","ista":"Erdös L, Knowles A, Yau H, Yin J. 2013. The local semicircle law for a general class of random matrices. Electronic Journal of Probability. 18(59), 1–58."}},{"department":[{"_id":"SiHi"}],"publication_status":"published","file_date_updated":"2020-07-14T12:45:50Z","oa":1,"author":[{"id":"3CF33908-F248-11E8-B48F-1D18A9856A87","first_name":"Gloria","last_name":"Arquè Fuste","full_name":"Arquè Fuste, Gloria"},{"last_name":"Casanovas","full_name":"Casanovas, Anna","first_name":"Anna"},{"first_name":"Mara","last_name":"Dierssen","full_name":"Dierssen, Mara"}],"date_published":"2013-01-16T00:00:00Z","abstract":[{"text":"Individuals with Down syndrome (DS) present important motor deficits that derive from altered motor development of infants and young children. DYRK1A, a candidate gene for DS abnormalities has been implicated in motor function due to its expression in motor nuclei in the adult brain, and its overexpression in DS mouse models leads to hyperactivity and altered motor learning. However, its precise role in the adult motor system, or its possible involvement in postnatal locomotor development has not yet been clarified. During the postnatal period we observed time-specific expression of Dyrk1A in discrete subsets of brainstem nuclei and spinal cord motor neurons. Interestingly, we describe for the first time the presence of Dyrk1A in the presynaptic terminal of the neuromuscular junctions and its axonal transport from the facial nucleus, suggesting a function for Dyrk1A in these structures. Relevant to DS, Dyrk1A overexpression in transgenic mice (TgDyrk1A) produces motor developmental alterations possibly contributing to DS motor phenotypes and modifies the numbers of motor cholinergic neurons, suggesting that the kinase may have a role in the development of the brainstem and spinal cord motor system.","lang":"eng"}],"type":"journal_article","scopus_import":"1","publisher":"Public Library of Science","ddc":["570"],"file":[{"file_id":"5160","file_name":"IST-2016-407-v1+1_journal.pone.0054285.pdf","access_level":"open_access","file_size":4795977,"relation":"main_file","date_created":"2018-12-12T10:15:38Z","creator":"system","date_updated":"2020-07-14T12:45:50Z","checksum":"512733b21419574a45f10cabef3d7f81","content_type":"application/pdf"}],"article_number":"e54285","external_id":{"isi":["000313682700103"]},"language":[{"iso":"eng"}],"publication":"PLoS One","title":"Dyrk1A is dynamically expressed on subsets of motor neurons and in the neuromuscular junction: Possible role in Down syndrome","date_created":"2018-12-11T11:59:52Z","article_processing_charge":"No","status":"public","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"isi":1,"date_updated":"2025-09-29T13:46:22Z","day":"16","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","citation":{"mla":"Arquè Fuste, Gloria, et al. “Dyrk1A Is Dynamically Expressed on Subsets of Motor Neurons and in the Neuromuscular Junction: Possible Role in Down Syndrome.” <i>PLoS One</i>, vol. 8, no. 1, e54285, Public Library of Science, 2013, doi:<a href=\"https://doi.org/10.1371/journal.pone.0054285\">10.1371/journal.pone.0054285</a>.","apa":"Arquè Fuste, G., Casanovas, A., &#38; Dierssen, M. (2013). Dyrk1A is dynamically expressed on subsets of motor neurons and in the neuromuscular junction: Possible role in Down syndrome. <i>PLoS One</i>. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pone.0054285\">https://doi.org/10.1371/journal.pone.0054285</a>","short":"G. Arquè Fuste, A. Casanovas, M. Dierssen, PLoS One 8 (2013).","ista":"Arquè Fuste G, Casanovas A, Dierssen M. 2013. Dyrk1A is dynamically expressed on subsets of motor neurons and in the neuromuscular junction: Possible role in Down syndrome. PLoS One. 8(1), e54285.","ama":"Arquè Fuste G, Casanovas A, Dierssen M. Dyrk1A is dynamically expressed on subsets of motor neurons and in the neuromuscular junction: Possible role in Down syndrome. <i>PLoS One</i>. 2013;8(1). doi:<a href=\"https://doi.org/10.1371/journal.pone.0054285\">10.1371/journal.pone.0054285</a>","ieee":"G. Arquè Fuste, A. Casanovas, and M. Dierssen, “Dyrk1A is dynamically expressed on subsets of motor neurons and in the neuromuscular junction: Possible role in Down syndrome,” <i>PLoS One</i>, vol. 8, no. 1. Public Library of Science, 2013.","chicago":"Arquè Fuste, Gloria, Anna Casanovas, and Mara Dierssen. “Dyrk1A Is Dynamically Expressed on Subsets of Motor Neurons and in the Neuromuscular Junction: Possible Role in Down Syndrome.” <i>PLoS One</i>. Public Library of Science, 2013. <a href=\"https://doi.org/10.1371/journal.pone.0054285\">https://doi.org/10.1371/journal.pone.0054285</a>."},"year":"2013","intvolume":"         8","publist_id":"3960","_id":"2838","volume":8,"month":"01","pubrep_id":"407","oa_version":"Published Version","quality_controlled":"1","doi":"10.1371/journal.pone.0054285","issue":"1","has_accepted_license":"1"},{"intvolume":"       339","publist_id":"3959","_id":"2839","ec_funded":1,"article_type":"original","year":"2013","citation":{"apa":"Weber, M., Hauschild, R., Schwarz, J., Moussion, C., de Vries, I., Legler, D., … Sixt, M. K. (2013). Interstitial dendritic cell guidance by haptotactic chemokine gradients. <i>Science</i>. American Association for the Advancement of Science. <a href=\"https://doi.org/10.1126/science.1228456\">https://doi.org/10.1126/science.1228456</a>","mla":"Weber, Michele, et al. “Interstitial Dendritic Cell Guidance by Haptotactic Chemokine Gradients.” <i>Science</i>, vol. 339, no. 6117, American Association for the Advancement of Science, 2013, pp. 328–32, doi:<a href=\"https://doi.org/10.1126/science.1228456\">10.1126/science.1228456</a>.","chicago":"Weber, Michele, Robert Hauschild, Jan Schwarz, Christine Moussion, Ingrid de Vries, Daniel Legler, Sanjiv Luther, Mark Tobias Bollenbach, and Michael K Sixt. “Interstitial Dendritic Cell Guidance by Haptotactic Chemokine Gradients.” <i>Science</i>. American Association for the Advancement of Science, 2013. <a href=\"https://doi.org/10.1126/science.1228456\">https://doi.org/10.1126/science.1228456</a>.","ama":"Weber M, Hauschild R, Schwarz J, et al. Interstitial dendritic cell guidance by haptotactic chemokine gradients. <i>Science</i>. 2013;339(6117):328-332. doi:<a href=\"https://doi.org/10.1126/science.1228456\">10.1126/science.1228456</a>","ieee":"M. Weber <i>et al.</i>, “Interstitial dendritic cell guidance by haptotactic chemokine gradients,” <i>Science</i>, vol. 339, no. 6117. American Association for the Advancement of Science, pp. 328–332, 2013.","ista":"Weber M, Hauschild R, Schwarz J, Moussion C, de Vries I, Legler D, Luther S, Bollenbach MT, Sixt MK. 2013. Interstitial dendritic cell guidance by haptotactic chemokine gradients. Science. 339(6117), 328–332.","short":"M. Weber, R. Hauschild, J. Schwarz, C. Moussion, I. de Vries, D. Legler, S. Luther, M.T. Bollenbach, M.K. Sixt, Science 339 (2013) 328–332."},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","isi":1,"day":"18","date_updated":"2025-09-29T13:45:52Z","issue":"6117","oa_version":"Published Version","quality_controlled":"1","doi":"10.1126/science.1228456","acknowledgement":"We thank M. Frank for technical assistance and S. Cremer, P. Schmalhorst, and E. Kiermaier for critical reading of the manuscript. This work was supported by a Humboldt Foundation postdoctoral fellowship (to M.W.), the German Research Foundation (Si1323 1,2 to M.S.), the Human Frontier Science Program (HFSP RGP0058/2011 to M.S.), the European Research Council (ERC StG 281556 to M.S.), and the Swiss National Science Foundation (31003A 127474 to D.F.L., 130488 to S.A.L.).","volume":339,"month":"01","project":[{"grant_number":"281556","name":"Cytoskeletal force generation and force transduction of migrating leukocytes","_id":"25A603A2-B435-11E9-9278-68D0E5697425","call_identifier":"FP7"},{"name":"Cell migration in complex environments: from in vivo experiments to theoretical models","_id":"25ABD200-B435-11E9-9278-68D0E5697425","grant_number":"RGP0058/2011"}],"main_file_link":[{"open_access":"1","url":"https://kops.uni-konstanz.de/bitstream/123456789/26341/2/Weber_263418.pdf"}],"external_id":{"isi":["000313622000047"]},"date_published":"2013-01-18T00:00:00Z","abstract":[{"text":"Directional guidance of cells via gradients of chemokines is considered crucial for embryonic development, cancer dissemination, and immune responses. Nevertheless, the concept still lacks direct experimental confirmation in vivo. Here, we identify endogenous gradients of the chemokine CCL21 within mouse skin and show that they guide dendritic cells toward lymphatic vessels. Quantitative imaging reveals depots of CCL21 within lymphatic endothelial cells and steeply decaying gradients within the perilymphatic interstitium. These gradients match the migratory patterns of the dendritic cells, which directionally approach vessels from a distance of up to 90-micrometers. Interstitial CCL21 is immobilized to heparan sulfates, and its experimental delocalization or swamping the endogenous gradients abolishes directed migration. These findings functionally establish the concept of haptotaxis, directed migration along immobilized gradients, in tissues.","lang":"eng"}],"type":"journal_article","scopus_import":"1","publisher":"American Association for the Advancement of Science","department":[{"_id":"MiSi"},{"_id":"Bio"}],"publication_status":"published","oa":1,"author":[{"first_name":"Michele","id":"3A3FC708-F248-11E8-B48F-1D18A9856A87","full_name":"Weber, Michele","last_name":"Weber"},{"first_name":"Robert","id":"4E01D6B4-F248-11E8-B48F-1D18A9856A87","full_name":"Hauschild, Robert","last_name":"Hauschild","orcid":"0000-0001-9843-3522"},{"first_name":"Jan","id":"346C1EC6-F248-11E8-B48F-1D18A9856A87","last_name":"Schwarz","full_name":"Schwarz, Jan"},{"last_name":"Moussion","full_name":"Moussion, Christine","id":"3356F664-F248-11E8-B48F-1D18A9856A87","first_name":"Christine"},{"first_name":"Ingrid","id":"4C7D837E-F248-11E8-B48F-1D18A9856A87","full_name":"De Vries, Ingrid","last_name":"De Vries"},{"last_name":"Legler","full_name":"Legler, Daniel","first_name":"Daniel"},{"first_name":"Sanjiv","full_name":"Luther, Sanjiv","last_name":"Luther"},{"first_name":"Mark Tobias","id":"3E6DB97A-F248-11E8-B48F-1D18A9856A87","full_name":"Bollenbach, Mark Tobias","last_name":"Bollenbach","orcid":"0000-0003-4398-476X"},{"last_name":"Sixt","orcid":"0000-0002-6620-9179","full_name":"Sixt, Michael K","id":"41E9FBEA-F248-11E8-B48F-1D18A9856A87","first_name":"Michael K"}],"page":"328 - 332","date_created":"2018-12-11T11:59:52Z","article_processing_charge":"No","status":"public","publication":"Science","title":"Interstitial dendritic cell guidance by haptotactic chemokine gradients","corr_author":"1","language":[{"iso":"eng"}]},{"page":"451 - 459","article_processing_charge":"No","date_created":"2018-12-11T11:59:52Z","status":"public","publication":"Cerebral Cortex","title":"Distinct roles of medial and lateral entorhinal cortex in spatial cognition","language":[{"iso":"eng"}],"external_id":{"isi":["000313529600020"]},"date_published":"2013-02-01T00:00:00Z","type":"journal_article","abstract":[{"text":"It is known that the entorhinal cortex plays a crucial role in spatial cognition in rodents. Neuroanatomical and electrophysiological data suggest that there is a functional distinction between 2 subregions within the entorhinal cortex, the medial entorhinal cortex (MEC), and the lateral entorhinal cortex (LEC). Rats with MEC or LEC lesions were trained in 2 navigation tasks requiring allothetic (water maze task) or idiothetic (path integration) information processing and 2-object exploration tasks allowing testing of spatial and nonspatial processing of intramaze objects. MEC lesions mildly affected place navigation in the water maze and produced a path integration deficit. They also altered the processing of spatial information in both exploration tasks while sparing the processing of nonspatial information. LEC lesions did not affect navigation abilities in both the water maze and the path integration tasks. They altered spatial and nonspatial processing in the object exploration task but not in the one-trial recognition task. Overall, these results indicate that the MEC is important for spatial processing and path integration. The LEC has some influence on both spatial and nonspatial processes, suggesting that the 2 kinds of information interact at the level of the EC.","lang":"eng"}],"scopus_import":"1","publisher":"Oxford University Press","department":[{"_id":"JoCs"}],"publication_status":"published","author":[{"full_name":"Van Cauter, Tiffany","last_name":"Van Cauter","first_name":"Tiffany"},{"first_name":"Jeremy","last_name":"Camon","full_name":"Camon, Jeremy"},{"id":"467FB3D4-F248-11E8-B48F-1D18A9856A87","first_name":"Alice","full_name":"Alvernhe, Alice","last_name":"Alvernhe"},{"last_name":"Elduayen","full_name":"Elduayen, Coralie","first_name":"Coralie"},{"first_name":"Francesca","full_name":"Sargolini, Francesca","last_name":"Sargolini"},{"full_name":"Save, Étienne","last_name":"Save","first_name":"Étienne"}],"issue":"2","oa_version":"None","quality_controlled":"1","doi":"10.1093/cercor/bhs033","volume":23,"month":"02","intvolume":"        23","publist_id":"3958","_id":"2840","year":"2013","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","citation":{"short":"T. Van Cauter, J. Camon, A. Alvernhe, C. Elduayen, F. Sargolini, É. Save, Cerebral Cortex 23 (2013) 451–459.","ama":"Van Cauter T, Camon J, Alvernhe A, Elduayen C, Sargolini F, Save É. Distinct roles of medial and lateral entorhinal cortex in spatial cognition. <i>Cerebral Cortex</i>. 2013;23(2):451-459. doi:<a href=\"https://doi.org/10.1093/cercor/bhs033\">10.1093/cercor/bhs033</a>","ista":"Van Cauter T, Camon J, Alvernhe A, Elduayen C, Sargolini F, Save É. 2013. Distinct roles of medial and lateral entorhinal cortex in spatial cognition. Cerebral Cortex. 23(2), 451–459.","chicago":"Van Cauter, Tiffany, Jeremy Camon, Alice Alvernhe, Coralie Elduayen, Francesca Sargolini, and Étienne Save. “Distinct Roles of Medial and Lateral Entorhinal Cortex in Spatial Cognition.” <i>Cerebral Cortex</i>. Oxford University Press, 2013. <a href=\"https://doi.org/10.1093/cercor/bhs033\">https://doi.org/10.1093/cercor/bhs033</a>.","ieee":"T. Van Cauter, J. Camon, A. Alvernhe, C. Elduayen, F. Sargolini, and É. Save, “Distinct roles of medial and lateral entorhinal cortex in spatial cognition,” <i>Cerebral Cortex</i>, vol. 23, no. 2. Oxford University Press, pp. 451–459, 2013.","mla":"Van Cauter, Tiffany, et al. “Distinct Roles of Medial and Lateral Entorhinal Cortex in Spatial Cognition.” <i>Cerebral Cortex</i>, vol. 23, no. 2, Oxford University Press, 2013, pp. 451–59, doi:<a href=\"https://doi.org/10.1093/cercor/bhs033\">10.1093/cercor/bhs033</a>.","apa":"Van Cauter, T., Camon, J., Alvernhe, A., Elduayen, C., Sargolini, F., &#38; Save, É. (2013). Distinct roles of medial and lateral entorhinal cortex in spatial cognition. <i>Cerebral Cortex</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/cercor/bhs033\">https://doi.org/10.1093/cercor/bhs033</a>"},"isi":1,"date_updated":"2025-09-29T13:45:23Z","day":"01"},{"date_updated":"2025-09-29T13:44:50Z","day":"25","isi":1,"citation":{"short":"H. Morita, C.-P.J. Heisenberg, Developmental Cell 24 (2013) 567–569.","ista":"Morita H, Heisenberg C-PJ. 2013. Holding on and letting go: Cadherin turnover in cell intercalation. Developmental Cell. 24(6), 567–569.","chicago":"Morita, Hitoshi, and Carl-Philipp J Heisenberg. “Holding on and Letting Go: Cadherin Turnover in Cell Intercalation.” <i>Developmental Cell</i>. Cell Press, 2013. <a href=\"https://doi.org/10.1016/j.devcel.2013.03.007\">https://doi.org/10.1016/j.devcel.2013.03.007</a>.","ieee":"H. Morita and C.-P. J. Heisenberg, “Holding on and letting go: Cadherin turnover in cell intercalation,” <i>Developmental Cell</i>, vol. 24, no. 6. Cell Press, pp. 567–569, 2013.","ama":"Morita H, Heisenberg C-PJ. Holding on and letting go: Cadherin turnover in cell intercalation. <i>Developmental Cell</i>. 2013;24(6):567-569. doi:<a href=\"https://doi.org/10.1016/j.devcel.2013.03.007\">10.1016/j.devcel.2013.03.007</a>","mla":"Morita, Hitoshi, and Carl-Philipp J. Heisenberg. “Holding on and Letting Go: Cadherin Turnover in Cell Intercalation.” <i>Developmental Cell</i>, vol. 24, no. 6, Cell Press, 2013, pp. 567–69, doi:<a href=\"https://doi.org/10.1016/j.devcel.2013.03.007\">10.1016/j.devcel.2013.03.007</a>.","apa":"Morita, H., &#38; Heisenberg, C.-P. J. (2013). Holding on and letting go: Cadherin turnover in cell intercalation. <i>Developmental Cell</i>. Cell Press. <a href=\"https://doi.org/10.1016/j.devcel.2013.03.007\">https://doi.org/10.1016/j.devcel.2013.03.007</a>"},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","year":"2013","publist_id":"3956","intvolume":"        24","_id":"2841","volume":24,"month":"05","quality_controlled":"1","oa_version":"None","doi":"10.1016/j.devcel.2013.03.007","issue":"6","department":[{"_id":"CaHe"}],"publication_status":"published","author":[{"first_name":"Hitoshi","id":"4C6E54C6-F248-11E8-B48F-1D18A9856A87","last_name":"Morita","full_name":"Morita, Hitoshi"},{"last_name":"Heisenberg","orcid":"0000-0002-0912-4566","full_name":"Heisenberg, Carl-Philipp J","id":"39427864-F248-11E8-B48F-1D18A9856A87","first_name":"Carl-Philipp J"}],"publisher":"Cell Press","scopus_import":"1","abstract":[{"lang":"eng","text":"In zebrafish early development, blastoderm cells undergo extensive radial intercalations, triggering the spreading of the blastoderm over the yolk cell and thereby initiating embryonic body axis formation. Now reporting in Developmental Cell, Song et al. (2013) demonstrate a critical function for EGF-dependent E-cadherin endocytosis in promoting blastoderm cell intercalations."}],"type":"journal_article","date_published":"2013-05-25T00:00:00Z","external_id":{"isi":["000317634500003"]},"language":[{"iso":"eng"}],"corr_author":"1","publication":"Developmental Cell","title":"Holding on and letting go: Cadherin turnover in cell intercalation","page":"567 - 569","status":"public","article_processing_charge":"No","date_created":"2018-12-11T11:59:52Z"},{"publisher":"Elsevier","scopus_import":"1","date_published":"2013-08-01T00:00:00Z","abstract":[{"text":"We outline two approaches to inference of neighbourhood size, N, and dispersal rate, σ2, based on either allele frequencies or on the lengths of sequence blocks that are shared between genomes. Over intermediate timescales (10-100 generations, say), populations that live in two dimensions approach a quasi-equilibrium that is independent of both their local structure and their deeper history. Over such scales, the standardised covariance of allele frequencies (i.e. pairwise FS T) falls with the logarithm of distance, and depends only on neighbourhood size, N, and a 'local scale', κ; the rate of gene flow, σ2, cannot be inferred. We show how spatial correlations can be accounted for, assuming a Gaussian distribution of allele frequencies, giving maximum likelihood estimates of N and κ. Alternatively, inferences can be based on the distribution of the lengths of sequence that are identical between blocks of genomes: long blocks (&gt;0.1 cM, say) tell us about intermediate timescales, over which we assume a quasi-equilibrium. For large neighbourhood size, the distribution of long blocks is given directly by the classical Wright-Malécot formula; this relationship can be used to infer both N and σ2. With small neighbourhood size, there is an appreciable chance that recombinant lineages will coalesce back before escaping into the distant past. For this case, we show that if genomes are sampled from some distance apart, then the distribution of lengths of blocks that are identical in state is geometric, with a mean that depends on N and σ2.","lang":"eng"}],"type":"journal_article","ddc":["570"],"file_date_updated":"2020-07-14T12:45:50Z","oa":1,"publication_status":"published","department":[{"_id":"NiBa"}],"author":[{"id":"4880FE40-F248-11E8-B48F-1D18A9856A87","first_name":"Nicholas H","last_name":"Barton","orcid":"0000-0002-8548-5240","full_name":"Barton, Nicholas H"},{"first_name":"Alison","last_name":"Etheridge","full_name":"Etheridge, Alison"},{"first_name":"Jerome","last_name":"Kelleher","full_name":"Kelleher, Jerome"},{"first_name":"Amandine","last_name":"Véber","full_name":"Véber, Amandine"}],"project":[{"call_identifier":"FP7","name":"Limits to selection in biology and in evolutionary computation","_id":"25B07788-B435-11E9-9278-68D0E5697425","grant_number":"250152"}],"file":[{"date_updated":"2020-07-14T12:45:50Z","creator":"system","content_type":"application/pdf","checksum":"9bf9d9a6fd03dd9df50906891f393bf8","file_id":"5288","file_name":"IST-2016-558-v1+1_inference_revised3101NB.pdf","file_size":1554712,"access_level":"open_access","date_created":"2018-12-12T10:17:33Z","relation":"main_file"},{"file_size":822964,"access_level":"open_access","file_name":"IST-2016-558-v1+2_inference_revised3101NBApp.pdf","file_id":"5289","relation":"main_file","date_created":"2018-12-12T10:17:34Z","creator":"system","date_updated":"2020-07-14T12:45:50Z","checksum":"2bceddb76edacd0cd5fad73051e2a928","content_type":"application/pdf"}],"external_id":{"isi":["000322688800010"]},"language":[{"iso":"eng"}],"page":"105 - 119","status":"public","article_processing_charge":"No","date_created":"2018-12-11T11:59:53Z","publication":"Theoretical Population Biology","title":"Inference in two dimensions: Allele frequencies versus lengths of shared sequence blocks","citation":{"apa":"Barton, N. H., Etheridge, A., Kelleher, J., &#38; Véber, A. (2013). Inference in two dimensions: Allele frequencies versus lengths of shared sequence blocks. <i>Theoretical Population Biology</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.tpb.2013.03.001\">https://doi.org/10.1016/j.tpb.2013.03.001</a>","mla":"Barton, Nicholas H., et al. “Inference in Two Dimensions: Allele Frequencies versus Lengths of Shared Sequence Blocks.” <i>Theoretical Population Biology</i>, vol. 87, no. 1, Elsevier, 2013, pp. 105–19, doi:<a href=\"https://doi.org/10.1016/j.tpb.2013.03.001\">10.1016/j.tpb.2013.03.001</a>.","ama":"Barton NH, Etheridge A, Kelleher J, Véber A. Inference in two dimensions: Allele frequencies versus lengths of shared sequence blocks. <i>Theoretical Population Biology</i>. 2013;87(1):105-119. doi:<a href=\"https://doi.org/10.1016/j.tpb.2013.03.001\">10.1016/j.tpb.2013.03.001</a>","ista":"Barton NH, Etheridge A, Kelleher J, Véber A. 2013. Inference in two dimensions: Allele frequencies versus lengths of shared sequence blocks. Theoretical Population Biology. 87(1), 105–119.","ieee":"N. H. Barton, A. Etheridge, J. Kelleher, and A. Véber, “Inference in two dimensions: Allele frequencies versus lengths of shared sequence blocks,” <i>Theoretical Population Biology</i>, vol. 87, no. 1. Elsevier, pp. 105–119, 2013.","chicago":"Barton, Nicholas H, Alison Etheridge, Jerome Kelleher, and Amandine Véber. “Inference in Two Dimensions: Allele Frequencies versus Lengths of Shared Sequence Blocks.” <i>Theoretical Population Biology</i>. Elsevier, 2013. <a href=\"https://doi.org/10.1016/j.tpb.2013.03.001\">https://doi.org/10.1016/j.tpb.2013.03.001</a>.","short":"N.H. Barton, A. Etheridge, J. Kelleher, A. Véber, Theoretical Population Biology 87 (2013) 105–119."},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","day":"01","date_updated":"2025-09-29T13:44:19Z","isi":1,"publist_id":"3953","intvolume":"        87","_id":"2842","year":"2013","ec_funded":1,"pubrep_id":"558","volume":87,"month":"08","issue":"1","has_accepted_license":"1","quality_controlled":"1","oa_version":"Submitted Version","doi":"10.1016/j.tpb.2013.03.001"},{"author":[{"last_name":"Edelsbrunner","orcid":"0000-0002-9823-6833","full_name":"Edelsbrunner, Herbert","first_name":"Herbert","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Pausinger, Florian","orcid":"0000-0002-8379-3768","last_name":"Pausinger","first_name":"Florian","id":"2A77D7A2-F248-11E8-B48F-1D18A9856A87"}],"day":"21","date_updated":"2025-09-29T11:14:36Z","department":[{"_id":"HeEd"}],"publication_status":"published","related_material":{"record":[{"id":"2255","relation":"later_version","status":"public"}]},"date_published":"2013-02-21T00:00:00Z","type":"conference","abstract":[{"lang":"eng","text":"Mathematical objects can be measured unambiguously, but not so objects from our physical world. Even the total length of tubelike shapes has its difficulties. We introduce a combination of geometric, probabilistic, and topological methods to design a stable length estimate for tube-like shapes; that is: one that is insensitive to small shape changes."}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"ista":"Edelsbrunner H, Pausinger F. 2013. Stable length estimates of tube-like shapes. 17th IAPR International Conference on Discrete Geometry for Computer Imagery. DGCI: Discrete Geometry for Computer Imagery, LNCS, vol. 7749, XV–XIX.","chicago":"Edelsbrunner, Herbert, and Florian Pausinger. “Stable Length Estimates of Tube-like Shapes.” In <i>17th IAPR International Conference on Discrete Geometry for Computer Imagery</i>, 7749:XV–XIX. Springer, 2013. <a href=\"https://doi.org/10.1007/978-3-642-37067-0\">https://doi.org/10.1007/978-3-642-37067-0</a>.","ieee":"H. Edelsbrunner and F. Pausinger, “Stable length estimates of tube-like shapes,” in <i>17th IAPR International Conference on Discrete Geometry for Computer Imagery</i>, Seville, Spain, 2013, vol. 7749, pp. XV–XIX.","ama":"Edelsbrunner H, Pausinger F. Stable length estimates of tube-like shapes. In: <i>17th IAPR International Conference on Discrete Geometry for Computer Imagery</i>. Vol 7749. Springer; 2013:XV-XIX. doi:<a href=\"https://doi.org/10.1007/978-3-642-37067-0\">10.1007/978-3-642-37067-0</a>","short":"H. Edelsbrunner, F. Pausinger, in:, 17th IAPR International Conference on Discrete Geometry for Computer Imagery, Springer, 2013, pp. XV–XIX.","apa":"Edelsbrunner, H., &#38; Pausinger, F. (2013). Stable length estimates of tube-like shapes. In <i>17th IAPR International Conference on Discrete Geometry for Computer Imagery</i> (Vol. 7749, pp. XV–XIX). Seville, Spain: Springer. <a href=\"https://doi.org/10.1007/978-3-642-37067-0\">https://doi.org/10.1007/978-3-642-37067-0</a>","mla":"Edelsbrunner, Herbert, and Florian Pausinger. “Stable Length Estimates of Tube-like Shapes.” <i>17th IAPR International Conference on Discrete Geometry for Computer Imagery</i>, vol. 7749, Springer, 2013, pp. XV–XIX, doi:<a href=\"https://doi.org/10.1007/978-3-642-37067-0\">10.1007/978-3-642-37067-0</a>."},"publisher":"Springer","scopus_import":1,"year":"2013","_id":"2843","intvolume":"      7749","publist_id":"3952","month":"02","volume":7749,"conference":{"name":"DGCI: Discrete Geometry for Computer Imagery","start_date":"2013-03-20","end_date":"2013-03-22","location":"Seville, Spain"},"language":[{"iso":"eng"}],"title":"Stable length estimates of tube-like shapes","doi":"10.1007/978-3-642-37067-0","alternative_title":["LNCS"],"oa_version":"None","publication":"17th IAPR International Conference on Discrete Geometry for Computer Imagery","quality_controlled":"1","date_created":"2018-12-11T11:59:53Z","status":"public","page":"XV - XIX"},{"status":"public","date_created":"2018-12-11T11:59:53Z","article_processing_charge":"No","page":"817 - 822","title":"An auxin transport mechanism restricts positive orthogravitropism in lateral roots","publication":"Current Biology","language":[{"iso":"eng"}],"project":[{"grant_number":"207362","name":"Hormonal cross-talk in plant organogenesis","_id":"253FCA6A-B435-11E9-9278-68D0E5697425","call_identifier":"FP7"}],"external_id":{"isi":["000318750900035"]},"scopus_import":"1","publisher":"Cell Press","abstract":[{"lang":"eng","text":"As soon as a seed germinates, plant growth relates to gravity to ensure that the root penetrates the soil and the shoot expands aerially. Whereas mechanisms of positive and negative orthogravitropism of primary roots and shoots are relatively well understood [1-3], lateral organs often show more complex growth behavior [4]. Lateral roots (LRs) seemingly suppress positive gravitropic growth and show a defined gravitropic set-point angle (GSA) that allows radial expansion of the root system (plagiotropism) [3, 4]. Despite its eminent importance for root architecture, it so far remains completely unknown how lateral organs partially suppress positive orthogravitropism. Here we show that the phytohormone auxin steers GSA formation and limits positive orthogravitropism in LR. Low and high auxin levels/signaling lead to radial or axial root systems, respectively. At a cellular level, it is the auxin transport-dependent regulation of asymmetric growth in the elongation zone that determines GSA. Our data suggest that strong repression of PIN4/PIN7 and transient PIN3 expression limit auxin redistribution in young LR columella cells. We conclude that PIN activity, by temporally limiting the asymmetric auxin fluxes in the tip of LRs, induces transient, differential growth responses in the elongation zone and, consequently, controls root architecture."}],"type":"journal_article","date_published":"2013-05-06T00:00:00Z","author":[{"first_name":"Michel","last_name":"Rosquete","full_name":"Rosquete, Michel"},{"full_name":"Von Wangenheim, Daniel","orcid":"0000-0002-6862-1247","last_name":"Von Wangenheim","first_name":"Daniel","id":"49E91952-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Marhavy, Peter","orcid":"0000-0001-5227-5741","last_name":"Marhavy","first_name":"Peter","id":"3F45B078-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Elke","last_name":"Barbez","full_name":"Barbez, Elke"},{"first_name":"Ernst","full_name":"Stelzer, Ernst","last_name":"Stelzer"},{"orcid":"0000-0002-8510-9739","last_name":"Benková","full_name":"Benková, Eva","id":"38F4F166-F248-11E8-B48F-1D18A9856A87","first_name":"Eva"},{"full_name":"Maizel, Alexis","last_name":"Maizel","first_name":"Alexis"},{"first_name":"Jürgen","full_name":"Kleine Vehn, Jürgen","last_name":"Kleine Vehn"}],"publication_status":"published","department":[{"_id":"JiFr"},{"_id":"EvBe"}],"issue":"9","doi":"10.1016/j.cub.2013.03.064","quality_controlled":"1","oa_version":"None","month":"05","volume":23,"_id":"2844","publist_id":"3950","intvolume":"        23","year":"2013","ec_funded":1,"citation":{"ama":"Rosquete M, von Wangenheim D, Marhavý P, et al. An auxin transport mechanism restricts positive orthogravitropism in lateral roots. <i>Current Biology</i>. 2013;23(9):817-822. doi:<a href=\"https://doi.org/10.1016/j.cub.2013.03.064\">10.1016/j.cub.2013.03.064</a>","ieee":"M. Rosquete <i>et al.</i>, “An auxin transport mechanism restricts positive orthogravitropism in lateral roots,” <i>Current Biology</i>, vol. 23, no. 9. Cell Press, pp. 817–822, 2013.","chicago":"Rosquete, Michel, Daniel von Wangenheim, Peter Marhavý, Elke Barbez, Ernst Stelzer, Eva Benková, Alexis Maizel, and Jürgen Kleine Vehn. “An Auxin Transport Mechanism Restricts Positive Orthogravitropism in Lateral Roots.” <i>Current Biology</i>. Cell Press, 2013. <a href=\"https://doi.org/10.1016/j.cub.2013.03.064\">https://doi.org/10.1016/j.cub.2013.03.064</a>.","ista":"Rosquete M, von Wangenheim D, Marhavý P, Barbez E, Stelzer E, Benková E, Maizel A, Kleine Vehn J. 2013. An auxin transport mechanism restricts positive orthogravitropism in lateral roots. Current Biology. 23(9), 817–822.","short":"M. Rosquete, D. von Wangenheim, P. Marhavý, E. Barbez, E. Stelzer, E. Benková, A. Maizel, J. Kleine Vehn, Current Biology 23 (2013) 817–822.","apa":"Rosquete, M., von Wangenheim, D., Marhavý, P., Barbez, E., Stelzer, E., Benková, E., … Kleine Vehn, J. (2013). An auxin transport mechanism restricts positive orthogravitropism in lateral roots. <i>Current Biology</i>. Cell Press. <a href=\"https://doi.org/10.1016/j.cub.2013.03.064\">https://doi.org/10.1016/j.cub.2013.03.064</a>","mla":"Rosquete, Michel, et al. “An Auxin Transport Mechanism Restricts Positive Orthogravitropism in Lateral Roots.” <i>Current Biology</i>, vol. 23, no. 9, Cell Press, 2013, pp. 817–22, doi:<a href=\"https://doi.org/10.1016/j.cub.2013.03.064\">10.1016/j.cub.2013.03.064</a>."},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","date_updated":"2025-09-29T13:43:30Z","day":"06","isi":1},{"year":"2013","intvolume":"        77","publist_id":"3949","_id":"2845","isi":1,"day":"20","date_updated":"2025-09-29T13:42:59Z","citation":{"chicago":"Rose, Tobias, Philipp Schönenberger, Karel Jezek, and Thomas Oertner. “Developmental Refinement of Vesicle Cycling at Schaffer Collateral Synapses.” <i>Neuron</i>. Elsevier, 2013. <a href=\"https://doi.org/10.1016/j.neuron.2013.01.021\">https://doi.org/10.1016/j.neuron.2013.01.021</a>.","ista":"Rose T, Schönenberger P, Jezek K, Oertner T. 2013. Developmental refinement of vesicle cycling at Schaffer collateral synapses. Neuron. 77(6), 1109–1121.","ieee":"T. Rose, P. Schönenberger, K. Jezek, and T. Oertner, “Developmental refinement of vesicle cycling at Schaffer collateral synapses,” <i>Neuron</i>, vol. 77, no. 6. Elsevier, pp. 1109–1121, 2013.","ama":"Rose T, Schönenberger P, Jezek K, Oertner T. Developmental refinement of vesicle cycling at Schaffer collateral synapses. <i>Neuron</i>. 2013;77(6):1109-1121. doi:<a href=\"https://doi.org/10.1016/j.neuron.2013.01.021\">10.1016/j.neuron.2013.01.021</a>","short":"T. Rose, P. Schönenberger, K. Jezek, T. Oertner, Neuron 77 (2013) 1109–1121.","apa":"Rose, T., Schönenberger, P., Jezek, K., &#38; Oertner, T. (2013). Developmental refinement of vesicle cycling at Schaffer collateral synapses. <i>Neuron</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.neuron.2013.01.021\">https://doi.org/10.1016/j.neuron.2013.01.021</a>","mla":"Rose, Tobias, et al. “Developmental Refinement of Vesicle Cycling at Schaffer Collateral Synapses.” <i>Neuron</i>, vol. 77, no. 6, Elsevier, 2013, pp. 1109–21, doi:<a href=\"https://doi.org/10.1016/j.neuron.2013.01.021\">10.1016/j.neuron.2013.01.021</a>."},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","oa_version":"None","quality_controlled":"1","doi":"10.1016/j.neuron.2013.01.021","issue":"6","volume":77,"month":"03","external_id":{"isi":["000316645000012"]},"department":[{"_id":"JoCs"}],"publication_status":"published","author":[{"first_name":"Tobias","last_name":"Rose","full_name":"Rose, Tobias"},{"last_name":"Schönenberger","full_name":"Schönenberger, Philipp","first_name":"Philipp","id":"3B9D816C-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Karel","last_name":"Jezek","full_name":"Jezek, Karel"},{"full_name":"Oertner, Thomas","last_name":"Oertner","first_name":"Thomas"}],"abstract":[{"text":"At synapses formed between dissociated neurons, about half of all synaptic vesicles are refractory to evoked release, forming the so-called &quot;resting pool.&quot; Here, we use optical measurements of vesicular pH to study developmental changes in pool partitioning and vesicle cycling in cultured hippocampal slices. Two-photon imaging of a genetically encoded two-color release sensor (ratio-sypHy) allowed us to perform calibrated measurements at individual Schaffer collateral boutons. Mature boutons released a large fraction of their vesicles during simulated place field activity, and vesicle retrieval rates were 7-fold higher compared to immature boutons. Saturating stimulation mobilized essentially all vesicles at mature synapses. Resting pool formation and a concomitant reduction in evoked release was induced by chronic depolarization but not by acute inhibition of the protein phosphatase calcineurin. We conclude that synapses in CA1 undergo a prominent refinement of vesicle use during early postnatal development that is not recapitulated in dissociated neuronal culture.","lang":"eng"}],"date_published":"2013-03-20T00:00:00Z","type":"journal_article","publisher":"Elsevier","scopus_import":"1","publication":"Neuron","title":"Developmental refinement of vesicle cycling at Schaffer collateral synapses","page":"1109 - 1121","article_processing_charge":"No","date_created":"2018-12-11T11:59:54Z","status":"public","language":[{"iso":"eng"}]},{"article_processing_charge":"No","date_created":"2018-12-11T11:59:54Z","status":"public","page":"461 - 468","title":"Sex differences in host defence interfere with parasite-mediated selection for outcrossing during host-parasite coevolution","publication":"Ecology Letters","language":[{"iso":"eng"}],"file":[{"access_level":"open_access","file_size":763731,"file_id":"5176","file_name":"IST-2016-404-v1+1_ele12068.pdf","date_created":"2018-12-12T10:15:52Z","relation":"main_file","date_updated":"2020-07-14T12:45:50Z","creator":"system","content_type":"application/pdf","checksum":"aa7db788f7da7d7f102539a249ebce50"}],"ddc":["570"],"abstract":[{"lang":"eng","text":"The Red Queen hypothesis proposes that coevolving parasites select for outcrossing in the host. Outcrossing relies on males, which often show lower immune investment due to, for example, sexual selection. Here, we demonstrate that such sex differences in immunity interfere with parasite-mediated selection for outcrossing. Two independent coevolution experiments with Caenorhabditis elegans and its microparasite Bacillus thuringiensis produced decreased yet stable frequencies of outcrossing male hosts. A subsequent systematic analysis verified that male C. elegans suffered from a direct selective disadvantage under parasite pressure (i.e. lower resistance, decreased sexual activity, increased escape behaviour), which can reduce outcrossing and thus male frequencies. At the same time, males offered an indirect selective benefit, because male-mediated outcrossing increased offspring resistance, thus favouring male persistence in the evolving populations. As sex differences in immunity are widespread, such interference of opposing selective constraints is likely of central importance during host adaptation to a coevolving parasite."}],"type":"journal_article","date_published":"2013-04-04T00:00:00Z","extern":"1","publisher":"Wiley-Blackwell","scopus_import":"1","author":[{"last_name":"El Masri","full_name":"El Masri, Leila","first_name":"Leila","id":"349A6E66-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Rebecca","full_name":"Schulte, Rebecca","last_name":"Schulte"},{"first_name":"Nadine","last_name":"Timmermeyer","full_name":"Timmermeyer, Nadine"},{"full_name":"Thanisch, Stefanie","last_name":"Thanisch","first_name":"Stefanie"},{"first_name":"Lena","last_name":"Crummenerl","full_name":"Crummenerl, Lena"},{"first_name":"Gunther","full_name":"Jansen, Gunther","last_name":"Jansen"},{"full_name":"Michiels, Nico","last_name":"Michiels","first_name":"Nico"},{"full_name":"Schulenburg, Hinrich","last_name":"Schulenburg","first_name":"Hinrich"}],"publication_status":"published","oa":1,"file_date_updated":"2020-07-14T12:45:50Z","has_accepted_license":"1","issue":"4","doi":"10.1111/ele.12068","oa_version":"Published Version","quality_controlled":"1","pubrep_id":"404","month":"04","volume":16,"_id":"2846","intvolume":"        16","publist_id":"3948","year":"2013","citation":{"apa":"El Masri, L., Schulte, R., Timmermeyer, N., Thanisch, S., Crummenerl, L., Jansen, G., … Schulenburg, H. (2013). Sex differences in host defence interfere with parasite-mediated selection for outcrossing during host-parasite coevolution. <i>Ecology Letters</i>. Wiley-Blackwell. <a href=\"https://doi.org/10.1111/ele.12068\">https://doi.org/10.1111/ele.12068</a>","mla":"El Masri, Leila, et al. “Sex Differences in Host Defence Interfere with Parasite-Mediated Selection for Outcrossing during Host-Parasite Coevolution.” <i>Ecology Letters</i>, vol. 16, no. 4, Wiley-Blackwell, 2013, pp. 461–68, doi:<a href=\"https://doi.org/10.1111/ele.12068\">10.1111/ele.12068</a>.","chicago":"El Masri, Leila, Rebecca Schulte, Nadine Timmermeyer, Stefanie Thanisch, Lena Crummenerl, Gunther Jansen, Nico Michiels, and Hinrich Schulenburg. “Sex Differences in Host Defence Interfere with Parasite-Mediated Selection for Outcrossing during Host-Parasite Coevolution.” <i>Ecology Letters</i>. Wiley-Blackwell, 2013. <a href=\"https://doi.org/10.1111/ele.12068\">https://doi.org/10.1111/ele.12068</a>.","ieee":"L. El Masri <i>et al.</i>, “Sex differences in host defence interfere with parasite-mediated selection for outcrossing during host-parasite coevolution,” <i>Ecology Letters</i>, vol. 16, no. 4. Wiley-Blackwell, pp. 461–468, 2013.","ista":"El Masri L, Schulte R, Timmermeyer N, Thanisch S, Crummenerl L, Jansen G, Michiels N, Schulenburg H. 2013. Sex differences in host defence interfere with parasite-mediated selection for outcrossing during host-parasite coevolution. Ecology Letters. 16(4), 461–468.","ama":"El Masri L, Schulte R, Timmermeyer N, et al. Sex differences in host defence interfere with parasite-mediated selection for outcrossing during host-parasite coevolution. <i>Ecology Letters</i>. 2013;16(4):461-468. doi:<a href=\"https://doi.org/10.1111/ele.12068\">10.1111/ele.12068</a>","short":"L. El Masri, R. Schulte, N. Timmermeyer, S. Thanisch, L. Crummenerl, G. Jansen, N. Michiels, H. Schulenburg, Ecology Letters 16 (2013) 461–468."},"user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","day":"04","date_updated":"2022-08-25T14:51:57Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","short":"CC BY (4.0)","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"}},{"scopus_import":1,"publisher":"Springer","abstract":[{"lang":"eng","text":"Depth-Bounded Systems form an expressive class of well-structured transition systems. They can model a wide range of concurrent infinite-state systems including those with dynamic thread creation, dynamically changing communication topology, and complex shared heap structures. We present the first method to automatically prove fair termination of depth-bounded systems. Our method uses a numerical abstraction of the system, which we obtain by systematically augmenting an over-approximation of the system’s reachable states with a finite set of counters. This numerical abstraction can be analyzed with existing termination provers. What makes our approach unique is the way in which it exploits the well-structuredness of the analyzed system. We have implemented our work in a prototype tool and used it to automatically prove liveness properties of complex concurrent systems, including nonblocking algorithms such as Treiber’s stack and several distributed processes. Many of these examples are beyond the scope of termination analyses that are based on traditional counter abstractions."}],"date_published":"2013-03-01T00:00:00Z","type":"conference","author":[{"full_name":"Bansal, Kshitij","last_name":"Bansal","first_name":"Kshitij"},{"first_name":"Eric","full_name":"Koskinen, Eric","last_name":"Koskinen"},{"full_name":"Wies, Thomas","last_name":"Wies","id":"447BFB88-F248-11E8-B48F-1D18A9856A87","first_name":"Thomas"},{"full_name":"Zufferey, Damien","last_name":"Zufferey","orcid":"0000-0002-3197-8736","first_name":"Damien","id":"4397AC76-F248-11E8-B48F-1D18A9856A87"}],"related_material":{"record":[{"relation":"dissertation_contains","status":"public","id":"1405"}]},"oa":1,"department":[{"_id":"ToHe"}],"publication_status":"published","project":[{"call_identifier":"FP7","_id":"25EE3708-B435-11E9-9278-68D0E5697425","name":"Quantitative Reactive Modeling","grant_number":"267989"},{"name":"Rigorous Systems Engineering","_id":"25832EC2-B435-11E9-9278-68D0E5697425","grant_number":"S 11407_N23","call_identifier":"FWF"}],"main_file_link":[{"url":"http://arise.or.at/pubpdf/Structural_Counter_Abstraction.pdf","open_access":"1"}],"conference":{"location":"Rome, Italy","end_date":"2013-03-24","start_date":"2013-03-16","name":"TACAS: Tools and Algorithms for the Construction and Analysis of Systems"},"language":[{"iso":"eng"}],"series_title":"Lecture Notes in Computer Science","status":"public","date_created":"2018-12-11T11:59:54Z","page":"62 - 77","alternative_title":["LNCS"],"title":"Structural Counter Abstraction","citation":{"short":"K. Bansal, E. Koskinen, T. Wies, D. Zufferey, 7795 (2013) 62–77.","ista":"Bansal K, Koskinen E, Wies T, Zufferey D. 2013. Structural Counter Abstraction (eds. N. Piterman &#38; S. Smolka). 7795, 62–77.","chicago":"Bansal, Kshitij, Eric Koskinen, Thomas Wies, and Damien Zufferey. “Structural Counter Abstraction.” Edited by Nir Piterman and Scott Smolka. Lecture Notes in Computer Science. Springer, 2013. <a href=\"https://doi.org/10.1007/978-3-642-36742-7_5\">https://doi.org/10.1007/978-3-642-36742-7_5</a>.","ieee":"K. Bansal, E. Koskinen, T. Wies, and D. Zufferey, “Structural Counter Abstraction,” vol. 7795. Springer, pp. 62–77, 2013.","ama":"Bansal K, Koskinen E, Wies T, Zufferey D. Structural Counter Abstraction. Piterman N, Smolka S, eds. 2013;7795:62-77. doi:<a href=\"https://doi.org/10.1007/978-3-642-36742-7_5\">10.1007/978-3-642-36742-7_5</a>","mla":"Bansal, Kshitij, et al. <i>Structural Counter Abstraction</i>. Edited by Nir Piterman and Scott Smolka, vol. 7795, Springer, 2013, pp. 62–77, doi:<a href=\"https://doi.org/10.1007/978-3-642-36742-7_5\">10.1007/978-3-642-36742-7_5</a>.","apa":"Bansal, K., Koskinen, E., Wies, T., &#38; Zufferey, D. (2013). Structural Counter Abstraction. (N. Piterman &#38; S. Smolka, Eds.). Presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, Rome, Italy: Springer. <a href=\"https://doi.org/10.1007/978-3-642-36742-7_5\">https://doi.org/10.1007/978-3-642-36742-7_5</a>"},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","day":"01","date_updated":"2025-04-15T08:11:55Z","_id":"2847","publist_id":"3947","intvolume":"      7795","year":"2013","ec_funded":1,"month":"03","volume":7795,"editor":[{"last_name":"Piterman","full_name":"Piterman, Nir","first_name":"Nir"},{"last_name":"Smolka","full_name":"Smolka, Scott","first_name":"Scott"}],"doi":"10.1007/978-3-642-36742-7_5","quality_controlled":"1","oa_version":"Submitted Version"},{"language":[{"iso":"eng"}],"arxiv":1,"publication":"Journal of Statistical Mechanics Theory and Experiment","title":"The simplest maximum entropy model for collective behavior in a neural network","article_processing_charge":"No","date_created":"2018-12-11T11:59:55Z","status":"public","department":[{"_id":"GaTk"}],"publication_status":"published","oa":1,"author":[{"first_name":"Gasper","id":"3D494DCA-F248-11E8-B48F-1D18A9856A87","full_name":"Tkacik, Gasper","last_name":"Tkacik","orcid":"0000-0002-6699-1455"},{"first_name":"Olivier","full_name":"Marre, Olivier","last_name":"Marre"},{"last_name":"Mora","full_name":"Mora, Thierry","first_name":"Thierry"},{"first_name":"Dario","full_name":"Amodei, Dario","last_name":"Amodei"},{"last_name":"Berry","full_name":"Berry, Michael","first_name":"Michael"},{"first_name":"William","full_name":"Bialek, William","last_name":"Bialek"}],"abstract":[{"text":"Recent work emphasizes that the maximum entropy principle provides a bridge between statistical mechanics models for collective behavior in neural networks and experiments on networks of real neurons. Most of this work has focused on capturing the measured correlations among pairs of neurons. Here we suggest an alternative, constructing models that are consistent with the distribution of global network activity, i.e. the probability that K out of N cells in the network generate action potentials in the same small time bin. The inverse problem that we need to solve in constructing the model is analytically tractable, and provides a natural 'thermodynamics' for the network in the limit of large N. We analyze the responses of neurons in a small patch of the retina to naturalistic stimuli, and find that the implied thermodynamics is very close to an unusual critical point, in which the entropy (in proper units) is exactly equal to the energy. © 2013 IOP Publishing Ltd and SISSA Medialab srl.\r\n","lang":"eng"}],"type":"journal_article","date_published":"2013-03-12T00:00:00Z","scopus_import":"1","publisher":"IOP Publishing","main_file_link":[{"open_access":"1","url":"http://arxiv.org/abs/1207.6319"}],"article_number":"P03011","external_id":{"arxiv":["1207.6319"],"isi":["000316056900011"]},"volume":2013,"month":"03","acknowledgement":"his work was supported in part by NSF Grants IIS-0613435 and PHY-0957573, by NIH Grants R01 EY14196 and P50 GM071508, by the Fannie and John Hertz Foundation, by the Human Frontiers Science Program, by the Swartz Foundation, and by the WM Keck Foundation.\r\n","oa_version":"Preprint","quality_controlled":"1","doi":"10.1088/1742-5468/2013/03/P03011","issue":"3","isi":1,"date_updated":"2025-09-29T13:42:18Z","day":"12","citation":{"mla":"Tkačik, Gašper, et al. “The Simplest Maximum Entropy Model for Collective Behavior in a Neural Network.” <i>Journal of Statistical Mechanics Theory and Experiment</i>, vol. 2013, no. 3, P03011, IOP Publishing, 2013, doi:<a href=\"https://doi.org/10.1088/1742-5468/2013/03/P03011\">10.1088/1742-5468/2013/03/P03011</a>.","apa":"Tkačik, G., Marre, O., Mora, T., Amodei, D., Berry, M., &#38; Bialek, W. (2013). The simplest maximum entropy model for collective behavior in a neural network. <i>Journal of Statistical Mechanics Theory and Experiment</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/1742-5468/2013/03/P03011\">https://doi.org/10.1088/1742-5468/2013/03/P03011</a>","short":"G. Tkačik, O. Marre, T. Mora, D. Amodei, M. Berry, W. Bialek, Journal of Statistical Mechanics Theory and Experiment 2013 (2013).","ama":"Tkačik G, Marre O, Mora T, Amodei D, Berry M, Bialek W. The simplest maximum entropy model for collective behavior in a neural network. <i>Journal of Statistical Mechanics Theory and Experiment</i>. 2013;2013(3). doi:<a href=\"https://doi.org/10.1088/1742-5468/2013/03/P03011\">10.1088/1742-5468/2013/03/P03011</a>","ieee":"G. Tkačik, O. Marre, T. Mora, D. Amodei, M. Berry, and W. Bialek, “The simplest maximum entropy model for collective behavior in a neural network,” <i>Journal of Statistical Mechanics Theory and Experiment</i>, vol. 2013, no. 3. IOP Publishing, 2013.","chicago":"Tkačik, Gašper, Olivier Marre, Thierry Mora, Dario Amodei, Michael Berry, and William Bialek. “The Simplest Maximum Entropy Model for Collective Behavior in a Neural Network.” <i>Journal of Statistical Mechanics Theory and Experiment</i>. IOP Publishing, 2013. <a href=\"https://doi.org/10.1088/1742-5468/2013/03/P03011\">https://doi.org/10.1088/1742-5468/2013/03/P03011</a>.","ista":"Tkačik G, Marre O, Mora T, Amodei D, Berry M, Bialek W. 2013. The simplest maximum entropy model for collective behavior in a neural network. Journal of Statistical Mechanics Theory and Experiment. 2013(3), P03011."},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","year":"2013","article_type":"original","intvolume":"      2013","publist_id":"3942","_id":"2850"},{"isi":1,"date_updated":"2025-09-29T13:41:46Z","day":"12","citation":{"mla":"Berry, Michael, et al. “A Simple Method for Estimating the Entropy of Neural Activity.” <i>Journal of Statistical Mechanics Theory and Experiment</i>, vol. 2013, no. 3, P03015, IOP Publishing, 2013, doi:<a href=\"https://doi.org/10.1088/1742-5468/2013/03/P03015\">10.1088/1742-5468/2013/03/P03015</a>.","apa":"Berry, M., Tkačik, G., Dubuis, J., Marre, O., &#38; Da Silveira, R. (2013). A simple method for estimating the entropy of neural activity. <i>Journal of Statistical Mechanics Theory and Experiment</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/1742-5468/2013/03/P03015\">https://doi.org/10.1088/1742-5468/2013/03/P03015</a>","short":"M. Berry, G. Tkačik, J. Dubuis, O. Marre, R. Da Silveira, Journal of Statistical Mechanics Theory and Experiment 2013 (2013).","ieee":"M. Berry, G. Tkačik, J. Dubuis, O. Marre, and R. Da Silveira, “A simple method for estimating the entropy of neural activity,” <i>Journal of Statistical Mechanics Theory and Experiment</i>, vol. 2013, no. 3. IOP Publishing, 2013.","ama":"Berry M, Tkačik G, Dubuis J, Marre O, Da Silveira R. A simple method for estimating the entropy of neural activity. <i>Journal of Statistical Mechanics Theory and Experiment</i>. 2013;2013(3). doi:<a href=\"https://doi.org/10.1088/1742-5468/2013/03/P03015\">10.1088/1742-5468/2013/03/P03015</a>","chicago":"Berry, Michael, Gašper Tkačik, Julien Dubuis, Olivier Marre, and Ravá Da Silveira. “A Simple Method for Estimating the Entropy of Neural Activity.” <i>Journal of Statistical Mechanics Theory and Experiment</i>. IOP Publishing, 2013. <a href=\"https://doi.org/10.1088/1742-5468/2013/03/P03015\">https://doi.org/10.1088/1742-5468/2013/03/P03015</a>.","ista":"Berry M, Tkačik G, Dubuis J, Marre O, Da Silveira R. 2013. A simple method for estimating the entropy of neural activity. Journal of Statistical Mechanics Theory and Experiment. 2013(3), P03015."},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","year":"2013","_id":"2851","intvolume":"      2013","publist_id":"3941","month":"03","volume":2013,"doi":"10.1088/1742-5468/2013/03/P03015","oa_version":"None","quality_controlled":"1","issue":"3","author":[{"full_name":"Berry, Michael","last_name":"Berry","first_name":"Michael"},{"first_name":"Gasper","id":"3D494DCA-F248-11E8-B48F-1D18A9856A87","full_name":"Tkacik, Gasper","orcid":"0000-0002-6699-1455","last_name":"Tkacik"},{"last_name":"Dubuis","full_name":"Dubuis, Julien","first_name":"Julien"},{"first_name":"Olivier","full_name":"Marre, Olivier","last_name":"Marre"},{"first_name":"Ravá","last_name":"Da Silveira","full_name":"Da Silveira, Ravá"}],"department":[{"_id":"GaTk"}],"publication_status":"published","date_published":"2013-03-12T00:00:00Z","abstract":[{"lang":"eng","text":"The number of possible activity patterns in a population of neurons grows exponentially with the size of the population. Typical experiments explore only a tiny fraction of the large space of possible activity patterns in the case of populations with more than 10 or 20 neurons. It is thus impossible, in this undersampled regime, to estimate the probabilities with which most of the activity patterns occur. As a result, the corresponding entropy - which is a measure of the computational power of the neural population - cannot be estimated directly. We propose a simple scheme for estimating the entropy in the undersampled regime, which bounds its value from both below and above. The lower bound is the usual 'naive' entropy of the experimental frequencies. The upper bound results from a hybrid approximation of the entropy which makes use of the naive estimate, a maximum entropy fit, and a coverage adjustment. We apply our simple scheme to artificial data, in order to check their accuracy; we also compare its performance to those of several previously defined entropy estimators. We then apply it to actual measurements of neural activity in populations with up to 100 cells. Finally, we discuss the similarities and differences between the proposed simple estimation scheme and various earlier methods. © 2013 IOP Publishing Ltd and SISSA Medialab srl."}],"type":"journal_article","publisher":"IOP Publishing","scopus_import":"1","external_id":{"isi":["000316056900015"]},"article_number":"P03015","language":[{"iso":"eng"}],"title":"A simple method for estimating the entropy of neural activity","publication":"Journal of Statistical Mechanics Theory and Experiment","date_created":"2018-12-11T11:59:56Z","article_processing_charge":"No","status":"public"},{"volume":280,"month":"05","oa_version":"Submitted Version","quality_controlled":"1","doi":"10.1098/rspb.2012.3035","issue":"1759","isi":1,"date_updated":"2025-09-29T13:41:12Z","day":"22","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","citation":{"chicago":"Refardt, Dominik, Tobias Bergmiller, and Rolf Kümmerli. “Altruism Can Evolve When Relatedness Is Low: Evidence from Bacteria Committing Suicide upon Phage Infection.” <i>Proceedings of the Royal Society of London Series B Biological Sciences</i>. The Royal Society, 2013. <a href=\"https://doi.org/10.1098/rspb.2012.3035\">https://doi.org/10.1098/rspb.2012.3035</a>.","ista":"Refardt D, Bergmiller T, Kümmerli R. 2013. Altruism can evolve when relatedness is low: Evidence from bacteria committing suicide upon phage infection. Proceedings of the Royal Society of London Series B Biological Sciences. 280(1759).","ama":"Refardt D, Bergmiller T, Kümmerli R. Altruism can evolve when relatedness is low: Evidence from bacteria committing suicide upon phage infection. <i>Proceedings of the Royal Society of London Series B Biological Sciences</i>. 2013;280(1759). doi:<a href=\"https://doi.org/10.1098/rspb.2012.3035\">10.1098/rspb.2012.3035</a>","ieee":"D. Refardt, T. Bergmiller, and R. Kümmerli, “Altruism can evolve when relatedness is low: Evidence from bacteria committing suicide upon phage infection,” <i>Proceedings of the Royal Society of London Series B Biological Sciences</i>, vol. 280, no. 1759. The Royal Society, 2013.","short":"D. Refardt, T. Bergmiller, R. Kümmerli, Proceedings of the Royal Society of London Series B Biological Sciences 280 (2013).","apa":"Refardt, D., Bergmiller, T., &#38; Kümmerli, R. (2013). Altruism can evolve when relatedness is low: Evidence from bacteria committing suicide upon phage infection. <i>Proceedings of the Royal Society of London Series B Biological Sciences</i>. The Royal Society. <a href=\"https://doi.org/10.1098/rspb.2012.3035\">https://doi.org/10.1098/rspb.2012.3035</a>","mla":"Refardt, Dominik, et al. “Altruism Can Evolve When Relatedness Is Low: Evidence from Bacteria Committing Suicide upon Phage Infection.” <i>Proceedings of the Royal Society of London Series B Biological Sciences</i>, vol. 280, no. 1759, The Royal Society, 2013, doi:<a href=\"https://doi.org/10.1098/rspb.2012.3035\">10.1098/rspb.2012.3035</a>."},"article_type":"original","year":"2013","intvolume":"       280","publist_id":"3939","_id":"2853","corr_author":"1","language":[{"iso":"eng"}],"publication":"Proceedings of the Royal Society of London Series B Biological Sciences","title":"Altruism can evolve when relatedness is low: Evidence from bacteria committing suicide upon phage infection","date_created":"2018-12-11T11:59:56Z","article_processing_charge":"No","pmid":1,"status":"public","department":[{"_id":"CaGu"}],"publication_status":"published","publication_identifier":{"eissn":["1471-2954"]},"related_material":{"record":[{"status":"public","relation":"research_data","id":"9751"}]},"oa":1,"author":[{"last_name":"Refardt","full_name":"Refardt, Dominik","first_name":"Dominik"},{"full_name":"Bergmiller, Tobias","orcid":"0000-0001-5396-4346","last_name":"Bergmiller","first_name":"Tobias","id":"2C471CFA-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Kümmerli","full_name":"Kümmerli, Rolf","first_name":"Rolf"}],"type":"journal_article","date_published":"2013-05-22T00:00:00Z","abstract":[{"lang":"eng","text":"High relatedness among interacting individuals has generally been considered a precondition for the evolution of altruism. However, kin-selection theory also predicts the evolution of altruism when relatedness is low, as long as the cost of the altruistic act is minor compared with its benefit. Here, we demonstrate evidence for a low-cost altruistic act in bacteria. We investigated Escherichia coli responding to the attack of an obligately lytic phage by committing suicide in order to prevent parasite transmission to nearby relatives. We found that bacterial suicide provides large benefits to survivors at marginal costs to committers. The cost of suicide was low, because infected cells are moribund, rapidly dying upon phage infection, such that no more opportunity for reproduction remains. As a consequence of its marginal cost, host suicide was selectively favoured even when relatedness between committers and survivors approached zero. Altogether, our findings demonstrate that low-cost suicide can evolve with ease, represents an effective host-defence strategy, and seems to be widespread among microbes. Moreover, low-cost suicide might also occur in higher organisms as exemplified by infected social insect workers leaving the colony to die in isolation."}],"publisher":"The Royal Society","scopus_import":"1","main_file_link":[{"url":"http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3619501/","open_access":"1"}],"external_id":{"pmid":["23516238"],"isi":["000317482100005"]}},{"volume":79,"month":"08","pubrep_id":"388","acknowledgement":"This work was partially supported in part by the NSF grants CCR-0132780, CNS-0720884, CCR-0225610, by the Swiss National Science Foundation, ERC Start Grant Graph Games (Project No. 279307), FWF NFN Grant S11407-N23 (RiSE), and a Microsoft faculty fellows","quality_controlled":"1","oa_version":"Published Version","doi":"10.1016/j.jcss.2012.12.001","issue":"5","has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)","image":"/images/cc_by_nc_nd.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode"},"date_updated":"2025-09-29T13:40:38Z","day":"01","isi":1,"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","citation":{"short":"K. Chatterjee, L. De Alfaro, T.A. Henzinger, Journal of Computer and System Sciences 79 (2013) 640–657.","ama":"Chatterjee K, De Alfaro L, Henzinger TA. Strategy improvement for concurrent reachability and turn based stochastic safety games. <i>Journal of Computer and System Sciences</i>. 2013;79(5):640-657. doi:<a href=\"https://doi.org/10.1016/j.jcss.2012.12.001\">10.1016/j.jcss.2012.12.001</a>","ieee":"K. Chatterjee, L. De Alfaro, and T. A. Henzinger, “Strategy improvement for concurrent reachability and turn based stochastic safety games,” <i>Journal of Computer and System Sciences</i>, vol. 79, no. 5. Elsevier, pp. 640–657, 2013.","ista":"Chatterjee K, De Alfaro L, Henzinger TA. 2013. Strategy improvement for concurrent reachability and turn based stochastic safety games. Journal of Computer and System Sciences. 79(5), 640–657.","chicago":"Chatterjee, Krishnendu, Luca De Alfaro, and Thomas A Henzinger. “Strategy Improvement for Concurrent Reachability and Turn Based Stochastic Safety Games.” <i>Journal of Computer and System Sciences</i>. Elsevier, 2013. <a href=\"https://doi.org/10.1016/j.jcss.2012.12.001\">https://doi.org/10.1016/j.jcss.2012.12.001</a>.","mla":"Chatterjee, Krishnendu, et al. “Strategy Improvement for Concurrent Reachability and Turn Based Stochastic Safety Games.” <i>Journal of Computer and System Sciences</i>, vol. 79, no. 5, Elsevier, 2013, pp. 640–57, doi:<a href=\"https://doi.org/10.1016/j.jcss.2012.12.001\">10.1016/j.jcss.2012.12.001</a>.","apa":"Chatterjee, K., De Alfaro, L., &#38; Henzinger, T. A. (2013). Strategy improvement for concurrent reachability and turn based stochastic safety games. <i>Journal of Computer and System Sciences</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jcss.2012.12.001\">https://doi.org/10.1016/j.jcss.2012.12.001</a>"},"article_type":"original","year":"2013","ec_funded":1,"publist_id":"3938","intvolume":"        79","_id":"2854","language":[{"iso":"eng"}],"corr_author":"1","publication":"Journal of Computer and System Sciences","title":"Strategy improvement for concurrent reachability and turn based stochastic safety games","page":"640 - 657","status":"public","date_created":"2018-12-11T11:59:57Z","article_processing_charge":"No","oa":1,"file_date_updated":"2020-07-14T12:45:51Z","department":[{"_id":"KrCh"},{"_id":"ToHe"}],"publication_status":"published","author":[{"id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","first_name":"Krishnendu","full_name":"Chatterjee, Krishnendu","last_name":"Chatterjee","orcid":"0000-0002-4561-241X"},{"last_name":"De Alfaro","full_name":"De Alfaro, Luca","first_name":"Luca"},{"first_name":"Thomas A","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","last_name":"Henzinger","orcid":"0000−0002−2985−7724","full_name":"Henzinger, Thomas A"}],"publisher":"Elsevier","scopus_import":"1","type":"journal_article","abstract":[{"text":"We consider concurrent games played on graphs. At every round of a game, each player simultaneously and independently selects a move; the moves jointly determine the transition to a successor state. Two basic objectives are the safety objective to stay forever in a given set of states, and its dual, the reachability objective to reach a given set of states. First, we present a simple proof of the fact that in concurrent reachability games, for all ε&gt;0, memoryless ε-optimal strategies exist. A memoryless strategy is independent of the history of plays, and an ε-optimal strategy achieves the objective with probability within ε of the value of the game. In contrast to previous proofs of this fact, our proof is more elementary and more combinatorial. Second, we present a strategy-improvement (a.k.a. policy-iteration) algorithm for concurrent games with reachability objectives. Finally, we present a strategy-improvement algorithm for turn-based stochastic games (where each player selects moves in turns) with safety objectives. Our algorithms yield sequences of player-1 strategies which ensure probabilities of winning that converge monotonically (from below) to the value of the game. © 2012 Elsevier Inc.","lang":"eng"}],"date_published":"2013-08-01T00:00:00Z","ddc":["000"],"file":[{"creator":"system","date_updated":"2020-07-14T12:45:51Z","checksum":"6d3ee12cceb946a0abe69594b6a22409","content_type":"application/pdf","file_id":"5370","file_name":"IST-2015-388-v1+1_1-s2.0-S0022000012001778-main.pdf","access_level":"open_access","file_size":425488,"relation":"main_file","date_created":"2018-12-12T10:18:48Z"}],"external_id":{"isi":["000316837300011"]},"project":[{"_id":"2581B60A-B435-11E9-9278-68D0E5697425","name":"Quantitative Graph Games: Theory and Applications","grant_number":"279307","call_identifier":"FP7"},{"call_identifier":"FWF","grant_number":"S11407","_id":"25863FF4-B435-11E9-9278-68D0E5697425","name":"Game Theory"},{"name":"Microsoft Research Faculty Fellowship","_id":"2587B514-B435-11E9-9278-68D0E5697425"}]},{"date_published":"2013-03-28T00:00:00Z","type":"journal_article","abstract":[{"lang":"eng","text":"Genomic imprinting leads to preferred expression of either the maternal or paternal alleles of a subset of genes. Imprinting is essential for mammalian development, and its deregulation causes many diseases. However, the functional relevance of imprinting at the cellular level is poorly understood for most imprinted genes. We used mosaic analysis with double markers (MADM) in mice to create uniparental disomies (UPDs) and to visualize imprinting effects with single-cell resolution. Although chromosome 12 UPD did not produce detectable phenotypes, chromosome 7 UPD caused highly significant paternal growth dominance in the liver and lung, but not in the brain or heart. A single gene on chromosome 7, encoding the secreted insulin-like growth factor 2 (IGF2), accounts for most of the paternal dominance effect. Mosaic analyses implied additional imprinted loci on chromosome 7 acting cell autonomously to transmit the IGF2 signal. Our study reveals chromosome- and cell-type specificity of genomic imprinting effects."}],"publisher":"Cell Press","scopus_import":"1","ddc":["570"],"department":[{"_id":"SiHi"}],"publication_status":"published","oa":1,"file_date_updated":"2020-07-14T12:45:51Z","author":[{"last_name":"Hippenmeyer","orcid":"0000-0003-2279-1061","full_name":"Hippenmeyer, Simon","first_name":"Simon","id":"37B36620-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Randy","last_name":"Johnson","full_name":"Johnson, Randy"},{"first_name":"Liqun","full_name":"Luo, Liqun","last_name":"Luo"}],"file":[{"relation":"main_file","date_created":"2018-12-12T10:17:20Z","file_id":"5274","file_name":"IST-2016-405-v1+1_1-s2.0-S2211124713000612-main.pdf","access_level":"open_access","file_size":1907211,"checksum":"6e977b918e81384cd571ec5a9d812289","content_type":"application/pdf","creator":"system","date_updated":"2020-07-14T12:45:51Z"}],"external_id":{"isi":["000321896000036"]},"corr_author":"1","language":[{"iso":"eng"}],"page":"960 - 967","article_processing_charge":"No","date_created":"2018-12-11T11:59:57Z","status":"public","publication":"Cell Reports","title":"Mosaic analysis with double markers reveals cell type specific paternal growth dominance","citation":{"short":"S. Hippenmeyer, R. Johnson, L. Luo, Cell Reports 3 (2013) 960–967.","ista":"Hippenmeyer S, Johnson R, Luo L. 2013. Mosaic analysis with double markers reveals cell type specific paternal growth dominance. Cell Reports. 3(3), 960–967.","ieee":"S. Hippenmeyer, R. Johnson, and L. Luo, “Mosaic analysis with double markers reveals cell type specific paternal growth dominance,” <i>Cell Reports</i>, vol. 3, no. 3. Cell Press, pp. 960–967, 2013.","chicago":"Hippenmeyer, Simon, Randy Johnson, and Liqun Luo. “Mosaic Analysis with Double Markers Reveals Cell Type Specific Paternal Growth Dominance.” <i>Cell Reports</i>. Cell Press, 2013. <a href=\"https://doi.org/10.1016/j.celrep.2013.02.002\">https://doi.org/10.1016/j.celrep.2013.02.002</a>.","ama":"Hippenmeyer S, Johnson R, Luo L. Mosaic analysis with double markers reveals cell type specific paternal growth dominance. <i>Cell Reports</i>. 2013;3(3):960-967. doi:<a href=\"https://doi.org/10.1016/j.celrep.2013.02.002\">10.1016/j.celrep.2013.02.002</a>","mla":"Hippenmeyer, Simon, et al. “Mosaic Analysis with Double Markers Reveals Cell Type Specific Paternal Growth Dominance.” <i>Cell Reports</i>, vol. 3, no. 3, Cell Press, 2013, pp. 960–67, doi:<a href=\"https://doi.org/10.1016/j.celrep.2013.02.002\">10.1016/j.celrep.2013.02.002</a>.","apa":"Hippenmeyer, S., Johnson, R., &#38; Luo, L. (2013). Mosaic analysis with double markers reveals cell type specific paternal growth dominance. <i>Cell Reports</i>. Cell Press. <a href=\"https://doi.org/10.1016/j.celrep.2013.02.002\">https://doi.org/10.1016/j.celrep.2013.02.002</a>"},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","tmp":{"name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)","image":"/images/cc_by_nc_nd.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode"},"isi":1,"day":"28","date_updated":"2025-09-29T13:40:05Z","intvolume":"         3","publist_id":"3937","_id":"2855","year":"2013","pubrep_id":"405","volume":3,"month":"03","issue":"3","has_accepted_license":"1","oa_version":"Published Version","quality_controlled":"1","doi":"10.1016/j.celrep.2013.02.002"}]