[{"author":[{"first_name":"Zeta","full_name":"Avarikioti, Zeta","last_name":"Avarikioti"},{"first_name":"Mahsa","full_name":"Bastankhah, Mahsa","last_name":"Bastankhah"},{"last_name":"Maddah-Ali","full_name":"Maddah-Ali, Mohammad Ali","first_name":"Mohammad Ali"},{"orcid":"0000-0002-9139-1654","id":"3E04A7AA-F248-11E8-B48F-1D18A9856A87","last_name":"Pietrzak","first_name":"Krzysztof Z","full_name":"Pietrzak, Krzysztof Z"},{"last_name":"Svoboda","orcid":"0000-0002-1419-3267","id":"130759D2-D7DD-11E9-87D2-DE0DE6697425","first_name":"Jakub","full_name":"Svoboda, Jakub"},{"full_name":"Yeo, Michelle X","first_name":"Michelle X","id":"2D82B818-F248-11E8-B48F-1D18A9856A87","last_name":"Yeo","orcid":"0009-0001-3676-4809"}],"page":"207-223","date_created":"2025-04-20T22:01:28Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Submitted Version","article_processing_charge":"No","fulldoi":"https://doi.org/10.1007/978-3-031-82349-7_15","month":"04","quality_controlled":"1","publication":"Computer Security. ESORICS 2024 International Workshops","publication_status":"published","language":[{"iso":"eng"}],"conference":{"location":"Bydgoszcz, Poland","start_date":"2024-09-16","end_date":"2024-09-20","name":"ESORICS: European Symposium on Research in Computer Security"},"department":[{"_id":"KrPi"},{"_id":"KrCh"}],"day":"01","publisher":"Springer Nature","project":[{"call_identifier":"H2020","grant_number":"863818","name":"Formal Methods for Stochastic Models: Algorithms and Applications","_id":"0599E47C-7A3F-11EA-A408-12923DDC885E"}],"acknowledgement":"This work was supported in part by the ERC CoG 863818 (ForM-SMArt), Austrian Science Fund (FWF) 10.55776/COE12, and MOE-T2EP20122-0014 (Data-Driven Distributed Algorithms) grants.","scopus_import":"1","year":"2025","citation":{"chicago":"Avarikioti, Zeta, Mahsa Bastankhah, Mohammad Ali Maddah-Ali, Krzysztof Z Pietrzak, Jakub Svoboda, and Michelle X Yeo. “Route Discovery in Private Payment Channel Networks.” In Computer Security. ESORICS 2024 International Workshops, 15263:207–23. Springer Nature, 2025. https://doi.org/10.1007/978-3-031-82349-7_15.","mla":"Avarikioti, Zeta, et al. “Route Discovery in Private Payment Channel Networks.” Computer Security. ESORICS 2024 International Workshops, vol. 15263, Springer Nature, 2025, pp. 207–23, doi:10.1007/978-3-031-82349-7_15.","ama":"Avarikioti Z, Bastankhah M, Maddah-Ali MA, Pietrzak KZ, Svoboda J, Yeo MX. Route discovery in private payment channel networks. In: Computer Security. ESORICS 2024 International Workshops. Vol 15263. Springer Nature; 2025:207-223. doi:10.1007/978-3-031-82349-7_15","ieee":"Z. Avarikioti, M. Bastankhah, M. A. Maddah-Ali, K. Z. Pietrzak, J. Svoboda, and M. X. Yeo, “Route discovery in private payment channel networks,” in Computer Security. ESORICS 2024 International Workshops, Bydgoszcz, Poland, 2025, vol. 15263, pp. 207–223.","ista":"Avarikioti Z, Bastankhah M, Maddah-Ali MA, Pietrzak KZ, Svoboda J, Yeo MX. 2025. Route discovery in private payment channel networks. Computer Security. ESORICS 2024 International Workshops. ESORICS: European Symposium on Research in Computer Security, LNCS, vol. 15263, 207–223.","apa":"Avarikioti, Z., Bastankhah, M., Maddah-Ali, M. A., Pietrzak, K. Z., Svoboda, J., & Yeo, M. X. (2025). Route discovery in private payment channel networks. In Computer Security. ESORICS 2024 International Workshops (Vol. 15263, pp. 207–223). Bydgoszcz, Poland: Springer Nature. https://doi.org/10.1007/978-3-031-82349-7_15","short":"Z. Avarikioti, M. Bastankhah, M.A. Maddah-Ali, K.Z. Pietrzak, J. Svoboda, M.X. Yeo, in:, Computer Security. ESORICS 2024 International Workshops, Springer Nature, 2025, pp. 207–223."},"main_file_link":[{"url":"https://eprint.iacr.org/2021/1539","open_access":"1"}],"alternative_title":["LNCS"],"ec_funded":1,"intvolume":" 15263","volume":15263,"date_published":"2025-04-01T00:00:00Z","doi":"10.1007/978-3-031-82349-7_15","_id":"19600","date_updated":"2025-11-05T07:52:35Z","status":"public","type":"conference","abstract":[{"text":"In this work, we explore route discovery in private payment channel networks. We first determine what “ideal\" privacy for a routing protocol means in this setting. We observe that protocols achieving this strong privacy definition exist by leveraging Multi-Party Computation but they are inherently inefficient as they must involve the entire network. We then present protocols with weaker privacy guarantees but much better efficiency (involving only a small fraction of the nodes). The core idea is that both sender and receiver gossip a message which propagates through the network, and the moment any node in the network receives both messages, a path is found. In our first protocol the message is always sent to all neighbouring nodes with a delay proportional to the fees of that edge. In our second protocol the message is only sent to one neighbour chosen randomly with a probability proportional to its degree. We additionally propose a more realistic notion of privacy in order to measure the privacy leakage of our protocols in practice. Our realistic notion of privacy challenges an adversary that join the network with a fixed budget to create channels to guess the sender and receiver of a transaction upon receiving messages from our protocols. Simulations of our protocols on the Lightning network topology (for random transactions and uniform fees) show that 1) forming edges with high degree nodes is a more effective attack strategy for the adversary, 2) there is a tradeoff between the number of nodes involved in our protocols (privacy) and the optimality of the discovered path, and 3) our protocols involve a very small fraction of the network on average.","lang":"eng"}],"OA_place":"repository","OA_type":"green","oa":1,"title":"Route discovery in private payment channel networks","publication_identifier":{"isbn":["9783031823480"],"eissn":["1611-3349"],"issn":["0302-9743"]}},{"volume":11,"_id":"19601","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"doi":"10.1038/s41477-025-01975-1","date_published":"2025-04-11T00:00:00Z","status":"public","type":"journal_article","date_updated":"2025-12-30T07:28:49Z","abstract":[{"lang":"eng","text":"In land plants, the signalling molecule auxin profoundly controls growth and development, chiefly through a transcriptional response system. The auxin response is mediated by modulating the activity of DNA-binding auxin response factor (ARF) proteins. The concentrations and stoichiometry of the competing A- and B-class ARFs define cells’ capacity for auxin response. In the minimal auxin response system of the liverwort Marchantia polymorpha, both A- and B-ARFs are unstable, but the underlying mechanisms, developmental relevance and evolutionary history of this instability are unknown. Here we identify a minimal motif that is necessary for MpARF2 (B-class) degradation and show that it is critical for development and the auxin response. Through comparative analysis and motif swaps among all ARF classes in extant algae and land plants, we infer that the emergence of ARF instability probably occurred in the ancestor of the A- and B-ARF clades and, therefore, preceded or coincided with the origin of the auxin response system."}],"external_id":{"pmid":["40216983"]},"OA_place":"publisher","OA_type":"hybrid","file_date_updated":"2025-12-30T07:28:09Z","title":"ARF degradation defines a deeply conserved step in auxin response","publication_identifier":{"eissn":["2055-0278"]},"oa":1,"year":"2025","citation":{"ista":"De Roij M, Hernández García J, Das S, Borst JW, Weijers D. 2025. ARF degradation defines a deeply conserved step in auxin response. Nature Plants. 11, 717–724.","ieee":"M. De Roij, J. Hernández García, S. Das, J. W. Borst, and D. Weijers, “ARF degradation defines a deeply conserved step in auxin response,” Nature Plants, vol. 11. Springer Nature, pp. 717–724, 2025.","apa":"De Roij, M., Hernández García, J., Das, S., Borst, J. W., & Weijers, D. (2025). ARF degradation defines a deeply conserved step in auxin response. Nature Plants. Springer Nature. https://doi.org/10.1038/s41477-025-01975-1","short":"M. De Roij, J. Hernández García, S. Das, J.W. Borst, D. Weijers, Nature Plants 11 (2025) 717–724.","chicago":"De Roij, Martijn, Jorge Hernández García, Shubhajit Das, Jan Willem Borst, and Dolf Weijers. “ARF Degradation Defines a Deeply Conserved Step in Auxin Response.” Nature Plants. Springer Nature, 2025. https://doi.org/10.1038/s41477-025-01975-1.","mla":"De Roij, Martijn, et al. “ARF Degradation Defines a Deeply Conserved Step in Auxin Response.” Nature Plants, vol. 11, Springer Nature, 2025, pp. 717–24, doi:10.1038/s41477-025-01975-1.","ama":"De Roij M, Hernández García J, Das S, Borst JW, Weijers D. ARF degradation defines a deeply conserved step in auxin response. Nature Plants. 2025;11:717-724. doi:10.1038/s41477-025-01975-1"},"file":[{"creator":"dernst","file_size":7062474,"relation":"main_file","content_type":"application/pdf","date_created":"2025-12-30T07:28:09Z","access_level":"open_access","date_updated":"2025-12-30T07:28:09Z","file_id":"20882","file_name":"2025_NaturePlants_deRoij.pdf","checksum":"8225c1899bb2f39f9a1707cc0697a052","success":1}],"intvolume":" 11","publication":"Nature Plants","ddc":["580"],"language":[{"iso":"eng"}],"publication_status":"published","article_type":"letter_note","pmid":1,"publisher":"Springer Nature","department":[{"_id":"JiFr"}],"day":"11","acknowledgement":"We thank S. Woudenberg, S. Valk and J. Rienstra for help and advice, A. Kuhn for comments on the paper and M. Prigge and M. Estelle for helpful discussions. This work was supported by a grant from Netherlands Organization for Scientific Research (NWO; OCENW.M20.031 to J.W.B.), a Marie Skłodowska-Curie Individual Fellowship (H2020-MSCA-IF-2020 contract number to J.H.G.) and a research grant from the Human Frontiers Research Program (HFSP; grant RGP0015/2022 to D.W.).","scopus_import":"1","has_accepted_license":"1","author":[{"last_name":"De Roij","full_name":"De Roij, Martijn","first_name":"Martijn"},{"full_name":"Hernández García, Jorge","first_name":"Jorge","last_name":"Hernández García"},{"last_name":"Das","id":"b08969a4-f2a5-11ed-b6c4-ff0f10b7d0be","full_name":"Das, Shubhajit","first_name":"Shubhajit"},{"last_name":"Borst","first_name":"Jan Willem","full_name":"Borst, Jan Willem"},{"last_name":"Weijers","first_name":"Dolf","full_name":"Weijers, Dolf"}],"page":"717-724","license":"https://creativecommons.org/licenses/by/4.0/","date_created":"2025-04-20T22:01:28Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"Yes (in subscription journal)","oa_version":"Published Version","month":"04","fulldoi":"https://doi.org/10.1038/s41477-025-01975-1","quality_controlled":"1"},{"date_created":"2025-04-20T22:01:28Z","page":"2890-2906.e14","acknowledged_ssus":[{"_id":"Bio"},{"_id":"ScienComp"}],"corr_author":"1","has_accepted_license":"1","author":[{"full_name":"Walker, James","first_name":"James","last_name":"Walker"},{"last_name":"Zhang","first_name":"Jingyi","full_name":"Zhang, Jingyi"},{"last_name":"Liu","full_name":"Liu, Yalin","first_name":"Yalin"},{"first_name":"Shujuan","full_name":"Xu, Shujuan","last_name":"Xu","id":"9724dd9d-f591-11ee-bd51-e97ed0652286"},{"last_name":"Yu","orcid":"0000-0002-9919-7282","id":"318e643b-8b61-11ed-b69e-aafa103ec8dd","first_name":"Yiming","full_name":"Yu, Yiming"},{"full_name":"Vickers, Martin","first_name":"Martin","last_name":"Vickers"},{"full_name":"Ouyang, Weizhi","first_name":"Weizhi","id":"fec73395-8b60-11ed-b69e-927fda99c743","last_name":"Ouyang"},{"full_name":"Tálas, Judit","first_name":"Judit","last_name":"Tálas"},{"last_name":"Dolan","full_name":"Dolan, Liam","first_name":"Liam"},{"last_name":"Nakajima","full_name":"Nakajima, Keiji","first_name":"Keiji"},{"id":"e0164712-22ee-11ed-b12a-d80fcdf35958","last_name":"Feng","orcid":"0000-0002-4008-1234","first_name":"Xiaoqi","full_name":"Feng, Xiaoqi"}],"fulldoi":"https://doi.org/10.1016/j.cell.2025.03.014","quality_controlled":"1","month":"05","article_processing_charge":"Yes (via OA deal)","oa_version":"Published Version","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","language":[{"iso":"eng"}],"ddc":["570"],"article_type":"original","publication_status":"published","publication":"Cell","scopus_import":"1","acknowledgement":"We thank Sir Richard Roberts (NEB) for the kind gift of anti-4mC antibodies. We are also grateful to the JIC Small Molecule Mass Spectrometry (Lionel Hill) and Chemistry (Martin Rejzek) platforms as well as the High Resolution Metabolomics Laboratory (Manfred Beckmann, Aberystwyth University) for their assistance with LC-MS. Additionally, we acknowledge the assistance of the JIC Bioimaging Facility and ISTA Imaging and Optics Facility for microscopy. Finally, we appreciate the High Performance Computing resources provided by the ISTA Scientific Computing Facility and Norwich BioScience Institute Partnership Computing Infrastructure. This work was funded by a Sainsbury Charitable Foundation studentship (J.W.), a UKRI-BBSRC Doctoral Training Partnerships studentship (BBT0087171 to J.T.), a European Research Council Starting Grant (“SexMeth” 804981 to J.W., S.X., and X.F.), two Biotechnology and Biological Sciences Research Council (BBSRC) grants (BBS0096201 and BBP0135111 to J.Z., M.V., and X.F.), an EMBO Long Term Fellowship (Y.L.), an ISTA Bridge Fellowship (S.X.), and ISTA core funding (Y.Y. and X.F.).","isi":1,"project":[{"grant_number":"804981","call_identifier":"H2020","_id":"bdb51a6e-d553-11ed-ba76-c2025f3d5725","name":"Establishment, modulation and inheritance of sexual lineage specific DNA methylation in plants"}],"day":"29","department":[{"_id":"XiFe"}],"publisher":"Elsevier","pmid":1,"year":"2025","intvolume":" 188","ec_funded":1,"file":[{"success":1,"access_level":"open_access","date_created":"2025-12-29T13:40:32Z","date_updated":"2025-12-29T13:40:32Z","file_name":"2025_Cell_Walker.pdf","file_id":"20871","checksum":"0dcc2feb368dfe7c4890093366b2dacb","file_size":11622960,"relation":"main_file","content_type":"application/pdf","creator":"dernst"}],"citation":{"chicago":"Walker, James, Jingyi Zhang, Yalin Liu, Shujuan Xu, Yiming Yu, Martin Vickers, Weizhi Ouyang, et al. “Extensive N4 Cytosine Methylation Is Essential for Marchantia Sperm Function.” Cell. Elsevier, 2025. https://doi.org/10.1016/j.cell.2025.03.014.","mla":"Walker, James, et al. “Extensive N4 Cytosine Methylation Is Essential for Marchantia Sperm Function.” Cell, vol. 188, no. 11, Elsevier, 2025, p. 2890–2906.e14, doi:10.1016/j.cell.2025.03.014.","ama":"Walker J, Zhang J, Liu Y, et al. Extensive N4 cytosine methylation is essential for Marchantia sperm function. Cell. 2025;188(11):2890-2906.e14. doi:10.1016/j.cell.2025.03.014","ista":"Walker J, Zhang J, Liu Y, Xu S, Yu Y, Vickers M, Ouyang W, Tálas J, Dolan L, Nakajima K, Feng X. 2025. Extensive N4 cytosine methylation is essential for Marchantia sperm function. Cell. 188(11), 2890–2906.e14.","ieee":"J. Walker et al., “Extensive N4 cytosine methylation is essential for Marchantia sperm function,” Cell, vol. 188, no. 11. Elsevier, p. 2890–2906.e14, 2025.","apa":"Walker, J., Zhang, J., Liu, Y., Xu, S., Yu, Y., Vickers, M., … Feng, X. (2025). Extensive N4 cytosine methylation is essential for Marchantia sperm function. Cell. Elsevier. https://doi.org/10.1016/j.cell.2025.03.014","short":"J. Walker, J. Zhang, Y. Liu, S. Xu, Y. Yu, M. Vickers, W. Ouyang, J. Tálas, L. Dolan, K. Nakajima, X. Feng, Cell 188 (2025) 2890–2906.e14."},"PlanS_conform":"1","status":"public","related_material":{"link":[{"description":"News on ISTA website","url":"https://ista.ac.at/en/news/from-bacterial-immunity-to-plant-sex/","relation":"press_release"}]},"type":"journal_article","date_updated":"2026-04-28T13:36:51Z","_id":"19602","doi":"10.1016/j.cell.2025.03.014","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"date_published":"2025-05-29T00:00:00Z","issue":"11","volume":188,"file_date_updated":"2025-12-29T13:40:32Z","title":"Extensive N4 cytosine methylation is essential for Marchantia sperm function","publication_identifier":{"issn":["0092-8674"],"eissn":["1097-4172"]},"oa":1,"OA_type":"hybrid","OA_place":"publisher","abstract":[{"lang":"eng","text":"N4-methylcytosine (4mC) is an important DNA modification in prokaryotes, but its relevance and even its presence in eukaryotes have been mysterious. Here we show that spermatogenesis in the liverwort Marchantia polymorpha involves two waves of extensive DNA methylation reprogramming. First, 5-methylcytosine (5mC) expands from transposons to the entire genome. Notably, the second wave installs 4mC throughout genic regions, covering over 50% of CG sites in sperm. 4mC requires a methyltransferase (MpDN4MT1a) that is specifically expressed during late spermiogenesis. Deletion of MpDN4MT1a alters the sperm transcriptome, causes sperm swimming and fertility defects, and impairs post-fertilization development. Our results reveal extensive 4mC in a eukaryote, identify a family of eukaryotic methyltransferases, and elucidate the biological functions of 4mC in reproductive development, thereby expanding the repertoire of functional eukaryotic DNA modifications."}],"external_id":{"isi":["001504744800006"],"pmid":["40209706"]}},{"day":"01","publisher":"Springer Nature","department":[{"_id":"MaKw"}],"acknowledgement":"Kalina Petrova is supported by the Swiss National Science Foundation, grant no. CRSII5 173721, and also receives funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 101034413. Simon Weber is supported by the Swiss National Science Foundation under project no. 204320.\r\nOpen access funding provided by Swiss Federal Institute of Technology Zurich.","project":[{"name":"IST-BRIDGE: International postdoctoral program","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","call_identifier":"H2020","grant_number":"101034413"}],"isi":1,"scopus_import":"1","publication":"Algorithmica","ddc":["510"],"language":[{"iso":"eng"}],"publication_status":"published","article_type":"original","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"Yes (via OA deal)","oa_version":"Published Version","fulldoi":"https://doi.org/10.1007/s00453-025-01306-y","quality_controlled":"1","month":"07","has_accepted_license":"1","author":[{"last_name":"Lill","first_name":"Jonas","full_name":"Lill, Jonas"},{"last_name":"Petrova","id":"554ff4e4-f325-11ee-b0c4-a10dbd523381","full_name":"Petrova, Kalina H","first_name":"Kalina H"},{"last_name":"Weber","first_name":"Simon","full_name":"Weber, Simon"}],"date_created":"2025-04-20T22:01:28Z","page":"983-1007","abstract":[{"text":"MaxCut is a classical NP-complete problem and a crucial building block in many\r\ncombinatorial algorithms. The famousEdwards-Erdös bound states that any connected\r\ngraph on n vertices with m edges contains a cut of size at least m/2 + n−1/4 . Crowston,\r\nJones and Mnich [Algorithmica, 2015] showed that the MaxCut problem on simple\r\nconnected graphs admits an FPT algorithm, where the parameter k is the difference\r\nbetween the desired cut size c and the lower bound given by the Edwards-Erdös\r\nbound. This was later improved by Etscheid and Mnich [Algorithmica, 2017] to run\r\nin parameterized linear time, i.e., f (k) · O(m). We improve upon this result in two\r\nways: Firstly, we extend the algorithm to work also for multigraphs (alternatively,\r\ngraphs with positive integer weights). Secondly, we change the parameter; instead of\r\nthe difference to the Edwards-Erdös bound, we use the difference to the Poljak-Turzík\r\nbound. The Poljak-Turzík bound states that any weighted graph G has a cut of weight\r\nat least w(G)/2 + wMSF (G)/4 , where w(G) denotes the total weight of G, and wMSF (G)\r\ndenotes the weight of its minimum spanning forest. In connected simple graphs the\r\ntwo bounds are equivalent, but for multigraphs the Poljak-Turzík bound can be larger\r\nand thus yield a smaller parameter k. Our algorithm also runs in parameterized linear\r\ntime, i.e., f (k) · O(m + n).","lang":"eng"}],"external_id":{"isi":["001463103800001"]},"OA_place":"publisher","OA_type":"hybrid","publication_identifier":{"issn":["0178-4617"],"eissn":["1432-0541"]},"file_date_updated":"2026-01-05T13:45:57Z","title":"Linear-time MaxCut in multigraphs parameterized above the Poljak-Turzík bound","oa":1,"volume":87,"_id":"19603","doi":"10.1007/s00453-025-01306-y","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"date_published":"2025-07-01T00:00:00Z","status":"public","type":"journal_article","related_material":{"record":[{"status":"public","id":"18758","relation":"earlier_version"}]},"date_updated":"2026-01-05T13:46:08Z","citation":{"short":"J. Lill, K.H. Petrova, S. Weber, Algorithmica 87 (2025) 983–1007.","apa":"Lill, J., Petrova, K. H., & Weber, S. (2025). Linear-time MaxCut in multigraphs parameterized above the Poljak-Turzík bound. Algorithmica. Springer Nature. https://doi.org/10.1007/s00453-025-01306-y","ista":"Lill J, Petrova KH, Weber S. 2025. Linear-time MaxCut in multigraphs parameterized above the Poljak-Turzík bound. Algorithmica. 87, 983–1007.","ieee":"J. Lill, K. H. Petrova, and S. Weber, “Linear-time MaxCut in multigraphs parameterized above the Poljak-Turzík bound,” Algorithmica, vol. 87. Springer Nature, pp. 983–1007, 2025.","ama":"Lill J, Petrova KH, Weber S. Linear-time MaxCut in multigraphs parameterized above the Poljak-Turzík bound. Algorithmica. 2025;87:983-1007. doi:10.1007/s00453-025-01306-y","mla":"Lill, Jonas, et al. “Linear-Time MaxCut in Multigraphs Parameterized above the Poljak-Turzík Bound.” Algorithmica, vol. 87, Springer Nature, 2025, pp. 983–1007, doi:10.1007/s00453-025-01306-y.","chicago":"Lill, Jonas, Kalina H Petrova, and Simon Weber. “Linear-Time MaxCut in Multigraphs Parameterized above the Poljak-Turzík Bound.” Algorithmica. Springer Nature, 2025. https://doi.org/10.1007/s00453-025-01306-y."},"file":[{"access_level":"open_access","date_created":"2026-01-05T13:45:57Z","date_updated":"2026-01-05T13:45:57Z","file_id":"20957","file_name":"2025_Algorithmica_Lill.pdf","checksum":"eab3f1834b0ba347b05ae9897729c0ad","success":1,"creator":"dernst","file_size":448554,"relation":"main_file","content_type":"application/pdf"}],"intvolume":" 87","ec_funded":1,"year":"2025"},{"date_created":"2025-04-24T06:34:07Z","corr_author":"1","has_accepted_license":"1","author":[{"id":"221708e1-1ff6-11ee-9fa6-85146607433e","last_name":"Hawaldar","orcid":"0000-0002-1965-4309","full_name":"Hawaldar, Samarth","first_name":"Samarth"},{"full_name":"Khaire, Siddhi Satish","first_name":"Siddhi Satish","last_name":"Khaire"},{"first_name":"Per","full_name":"Delsing, Per","last_name":"Delsing"},{"last_name":"Suri","first_name":"Baladitya","full_name":"Suri, Baladitya"}],"month":"04","fulldoi":"https://doi.org/10.1103/physrevapplied.23.044042","quality_controlled":"1","article_processing_charge":"Yes (via OA deal)","oa_version":"Published Version","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","language":[{"iso":"eng"}],"ddc":["539"],"article_type":"original","publication_status":"published","publication":"Physical Review Applied","scopus_import":"1","acknowledgement":"The authors acknowledge the support of DST-INSPIRE Fellowship No. IF180339 and DST-SERB Core Research Grant No. CRG/2018/002129. S.H. acknowledges the support of the Kishore Vaigyanik Protsahan Yojana (KVPY). S.H. also acknowledges helpful discussions with Harsh Arora and Johannes Fink.","isi":1,"publisher":"American Physical Society","day":"18","department":[{"_id":"GradSch"},{"_id":"JoFi"}],"year":"2025","intvolume":" 23","file":[{"creator":"shawalda","content_type":"application/pdf","relation":"main_file","file_size":837219,"checksum":"582b2ed6afb654300cabf0e3add14ca8","file_id":"19620","file_name":"PhysRevApplied.23.044042.pdf","date_updated":"2025-04-24T06:40:22Z","access_level":"open_access","date_created":"2025-04-24T06:40:22Z","success":1}],"citation":{"short":"S. Hawaldar, S.S. Khaire, P. Delsing, B. Suri, Physical Review Applied 23 (2025).","apa":"Hawaldar, S., Khaire, S. S., Delsing, P., & Suri, B. (2025). On-demand single-microwave-photon source in a superconducting circuit with wideband frequency tunability. Physical Review Applied. American Physical Society. https://doi.org/10.1103/physrevapplied.23.044042","ieee":"S. Hawaldar, S. S. Khaire, P. Delsing, and B. Suri, “On-demand single-microwave-photon source in a superconducting circuit with wideband frequency tunability,” Physical Review Applied, vol. 23, no. 4. American Physical Society, 2025.","ista":"Hawaldar S, Khaire SS, Delsing P, Suri B. 2025. On-demand single-microwave-photon source in a superconducting circuit with wideband frequency tunability. Physical Review Applied. 23(4), 044042.","ama":"Hawaldar S, Khaire SS, Delsing P, Suri B. On-demand single-microwave-photon source in a superconducting circuit with wideband frequency tunability. Physical Review Applied. 2025;23(4). doi:10.1103/physrevapplied.23.044042","mla":"Hawaldar, Samarth, et al. “On-Demand Single-Microwave-Photon Source in a Superconducting Circuit with Wideband Frequency Tunability.” Physical Review Applied, vol. 23, no. 4, 044042, American Physical Society, 2025, doi:10.1103/physrevapplied.23.044042.","chicago":"Hawaldar, Samarth, Siddhi Satish Khaire, Per Delsing, and Baladitya Suri. “On-Demand Single-Microwave-Photon Source in a Superconducting Circuit with Wideband Frequency Tunability.” Physical Review Applied. American Physical Society, 2025. https://doi.org/10.1103/physrevapplied.23.044042."},"status":"public","type":"journal_article","date_updated":"2025-09-30T12:17:33Z","_id":"19617","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"doi":"10.1103/physrevapplied.23.044042","date_published":"2025-04-18T00:00:00Z","issue":"4","article_number":"044042","volume":23,"publication_identifier":{"issn":["2331-7019"]},"file_date_updated":"2025-04-24T06:40:22Z","title":"On-demand single-microwave-photon source in a superconducting circuit with wideband frequency tunability","oa":1,"OA_type":"hybrid","OA_place":"publisher","abstract":[{"lang":"eng","text":"In this article, we propose a method for generating single microwave photons in superconducting circuits. We theoretically show that pure single microwave photons can be generated on demand and tuned over a large frequency band by making use of Landau-Zener transitions under a rapid sweep of a control parameter. We devise a protocol that enables fast control of the frequency of the emitted photon over two octaves, without requiring extensive calibration. Additionally, we make theoretical estimates of the generation efficiency, tunability, purity, and linewidth of the photons emitted using this method for both charge- and flux-qubit-based architectures. We also provide estimates of the optimal device parameters required for these architectures to realize the device."}],"external_id":{"isi":["001490745300002"]}},{"arxiv":1,"citation":{"chicago":"Nessonov, Nikolay, and Nhok T Ngo. “Indecomposable Characters of Inductive Limits of Symmetric Groups.” Representation Theory. American Mathematical Society, 2025. https://doi.org/10.1090/ert/689.","mla":"Nessonov, Nikolay, and Nhok T. Ngo. “Indecomposable Characters of Inductive Limits of Symmetric Groups.” Representation Theory, vol. 29, no. 8, American Mathematical Society, 2025, pp. 256–88, doi:10.1090/ert/689.","ama":"Nessonov N, Ngo NT. Indecomposable characters of inductive limits of symmetric groups. Representation Theory. 2025;29(8):256-288. doi:10.1090/ert/689","apa":"Nessonov, N., & Ngo, N. T. (2025). Indecomposable characters of inductive limits of symmetric groups. Representation Theory. American Mathematical Society. https://doi.org/10.1090/ert/689","ieee":"N. Nessonov and N. T. Ngo, “Indecomposable characters of inductive limits of symmetric groups,” Representation Theory, vol. 29, no. 8. American Mathematical Society, pp. 256–288, 2025.","ista":"Nessonov N, Ngo NT. 2025. Indecomposable characters of inductive limits of symmetric groups. Representation Theory. 29(8), 256–288.","short":"N. Nessonov, N.T. Ngo, Representation Theory 29 (2025) 256–288."},"intvolume":" 29","file":[{"file_id":"19644","file_name":"2025_RepresentationTheory_Nessonov.pdf","checksum":"f6541ea1736a7413c6d24f14d64a4dda","date_created":"2025-05-05T06:57:49Z","access_level":"open_access","date_updated":"2025-05-05T06:57:49Z","success":1,"creator":"dernst","relation":"main_file","content_type":"application/pdf","file_size":424364}],"year":"2025","abstract":[{"lang":"eng","text":"In this paper we obtain a complete description of all indecomposable characters (central positive-definite functions) of inductive limits of the symmetric groups under block diagonal embedding. As a corollary we obtain the full classification of the isomorphism classes of these inductive limits."}],"external_id":{"arxiv":["2206.01964"]},"publication_identifier":{"issn":["1088-4165"]},"file_date_updated":"2025-05-05T06:57:49Z","title":"Indecomposable characters of inductive limits of symmetric groups","oa":1,"OA_place":"publisher","OA_type":"hybrid","issue":"8","volume":29,"status":"public","type":"journal_article","date_updated":"2025-05-05T06:59:07Z","_id":"19621","date_published":"2025-04-10T00:00:00Z","tmp":{"image":"/images/cc_by.png","name":"Creative Commons Attribution 3.0 Unported (CC BY 3.0)","short":"CC BY (3.0)","legal_code_url":"https://creativecommons.org/licenses/by/3.0/legalcode"},"doi":"10.1090/ert/689","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","fulldoi":"https://doi.org/10.1090/ert/689","month":"04","quality_controlled":"1","article_processing_charge":"Yes (in subscription journal)","oa_version":"Published Version","has_accepted_license":"1","author":[{"first_name":"Nikolay","full_name":"Nessonov, Nikolay","last_name":"Nessonov"},{"first_name":"Nhok T","full_name":"Ngo, Nhok T","last_name":"Ngo","id":"28e53c8c-896a-11ed-bdf8-f809043ce2f0"}],"license":"https://creativecommons.org/licenses/by/3.0/","date_created":"2025-04-24T08:48:05Z","page":"256-288","corr_author":"1","publisher":"American Mathematical Society","department":[{"_id":"GradSch"},{"_id":"TaHa"}],"day":"10","scopus_import":"1","acknowledgement":"The authors were partially supported by the “Long-term program of support of the Ukrainian research teams at the Polish Academy of Sciences carried out in collaboration with the U.S. National Academy of Sciences with the financial support of external partners”. The second author was also supported by the Austrian Science Fund (FWF) grant “Geometry of the tip of the global nilpotent cone” no. 10.55776/P35847","project":[{"_id":"34b2c9cb-11ca-11ed-8bc3-a50ba74ca4a3","name":"Geometry of the tip of the global nilpotent cone","grant_number":"P35847"}],"publication":"Representation Theory","ddc":["510"],"language":[{"iso":"eng"}],"publication_status":"published","article_type":"original"},{"user_id":"68b8ca59-c5b3-11ee-8790-cd641c68093d","article_processing_charge":"No","keyword":["quantum many-body scars","non-equilibrium physics","Rydberg atoms"],"oa_version":"Published Version","month":"04","fulldoi":"https://doi.org/10.15479/AT:ISTA:19623","contributor":[{"last_name":"Kerschbaumer","id":"ade85a9c-3200-11ee-973b-91c1eb240410","first_name":"Aron","contributor_type":"researcher"},{"last_name":"Ljubotina","contributor_type":"researcher","first_name":"Marko"},{"last_name":"Serbyn","orcid":"0000-0002-2399-5827","id":"47809E7E-F248-11E8-B48F-1D18A9856A87","first_name":"Maksym","contributor_type":"researcher"},{"first_name":"Jean-Yves Marc","contributor_type":"researcher","last_name":"Desaules","id":"6c292945-a610-11ed-9eec-c3be1ad62a80","orcid":"0000-0002-3749-6375"}],"has_accepted_license":"1","author":[{"orcid":"0000-0002-3749-6375","id":"6c292945-a610-11ed-9eec-c3be1ad62a80","last_name":"Desaules","first_name":"Jean-Yves Marc","full_name":"Desaules, Jean-Yves Marc"}],"corr_author":"1","date_created":"2025-04-24T19:58:46Z","license":"https://creativecommons.org/licenses/by-nc/4.0/","acknowledged_ssus":[{"_id":"ScienComp"}],"department":[{"_id":"MaSe"}],"publisher":"Institute of Science and Technology Austria","day":"24","acknowledgement":"The authors are grateful to Zlatko Papić, Dolev Bluvstein, Nishad Maskara, Marcello Dalmonte, Thomas Iadecola, and Johannes Feldmeier for insightful discussions. A. K., M. L., and M. S. acknowledge support by the European Research Council under the European Union’s Horizon 2020 research and innovation program (Grant Agreement No. 850899). J.-Y. D. acknowledges funding from the European Union’s Horizon 2020 research and innovation program under the Marie Skłodowska-Curie Grant Agreement No. 101034413.","project":[{"_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","name":"IST-BRIDGE: International postdoctoral program","grant_number":"101034413","call_identifier":"H2020"},{"name":"Non-Ergodic Quantum Matter: Universality, Dynamics and Control","_id":"23841C26-32DE-11EA-91FC-C7463DDC885E","call_identifier":"H2020","grant_number":"850899"}],"ddc":["530"],"citation":{"mla":"Desaules, Jean-Yves Marc. Research Data for “Quantum Many-Body Scars beyond the PXP Model in Rydberg Simulators.” Institute of Science and Technology Austria, 2025, doi:10.15479/AT:ISTA:19623.","ama":"Desaules J-YM. Research Data for “Quantum Many-Body Scars beyond the PXP Model in Rydberg Simulators.” 2025. doi:10.15479/AT:ISTA:19623","chicago":"Desaules, Jean-Yves Marc. “Research Data for ‘Quantum Many-Body Scars beyond the PXP Model in Rydberg Simulators.’” Institute of Science and Technology Austria, 2025. https://doi.org/10.15479/AT:ISTA:19623.","short":"J.-Y.M. Desaules, (2025).","ieee":"J.-Y. M. Desaules, “Research Data for ‘Quantum Many-Body Scars beyond the PXP Model in Rydberg Simulators.’” Institute of Science and Technology Austria, 2025.","ista":"Desaules J-YM. 2025. Research Data for ‘Quantum Many-Body Scars beyond the PXP Model in Rydberg Simulators’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:19623.","apa":"Desaules, J.-Y. M. (2025). Research Data for “Quantum Many-Body Scars beyond the PXP Model in Rydberg Simulators.” Institute of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:19623"},"file":[{"file_size":583478621,"relation":"main_file","content_type":"application/zip","creator":"jdesaule","success":1,"access_level":"open_access","date_created":"2025-05-05T07:14:17Z","date_updated":"2025-05-05T07:14:17Z","file_id":"19646","file_name":"Data+Code.zip","checksum":"d073314c4dc95d93feaadbff188ce4a1"},{"checksum":"d386a2364fb1147ef6dad30ad029c080","file_id":"19647","file_name":"readme.txt","date_updated":"2025-05-05T07:13:46Z","date_created":"2025-05-05T07:13:46Z","access_level":"open_access","success":1,"creator":"jdesaule","content_type":"text/plain","relation":"main_file","file_size":15856}],"ec_funded":1,"year":"2025","abstract":[{"text":"Persistent revivals recently observed in Rydberg atom simulators have challenged our understanding of thermalization and attracted much interest to the concept of quantum many-body scars (QMBSs). QMBSs are non-thermal highly excited eigenstates that coexist with typical eigenstates in the spectrum of many-body Hamiltonians, and have since been reported in multiple theoretical models, including the so-called PXP model, approximately realized by Rydberg simulators. At the same time, questions of how common QMBSs are and in what models they are physically realized remain open. In this Letter, we demonstrate that QMBSs exist in a broader family of models that includes and generalizes PXP to longer-range constraints and states with different periodicity. We show that in each model, multiple QMBS families can be found. Each of them relies on a different approximate 𝔰𝔲(2) algebra, leading to oscillatory dynamics in all cases. However, in contrast to the PXP model, their observation requires launching dynamics from weakly entangled initial states rather than from a product state. QMBSs reported here may be experimentally probed using Rydberg atom simulator in the regime of longer-range Rydberg blockades.","lang":"eng"}],"file_date_updated":"2025-05-05T07:14:17Z","title":"Research Data for \"Quantum Many-Body Scars beyond the PXP Model in Rydberg Simulators\"","oa":1,"_id":"19623","date_published":"2025-04-24T00:00:00Z","tmp":{"image":"/images/cc_by_nc.png","name":"Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)","short":"CC BY-NC (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc/4.0/legalcode"},"doi":"10.15479/AT:ISTA:19623","status":"public","type":"research_data","related_material":{"record":[{"relation":"used_in_publication","id":"19664","status":"public"}]},"date_updated":"2026-06-10T08:40:52Z"},{"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","fulldoi":"https://doi.org/10.1007/s00220-025-05285-7","quality_controlled":"1","month":"05","article_processing_charge":"Yes (via OA deal)","oa_version":"Published Version","has_accepted_license":"1","author":[{"last_name":"Kumar","full_name":"Kumar, R. Rahul","first_name":"R. Rahul"},{"id":"88644358-0A0E-11EA-8FA5-49A33DDC885E","orcid":"0000-0002-0519-4241","last_name":"Wirth","first_name":"Melchior","full_name":"Wirth, Melchior"}],"date_created":"2025-04-27T22:02:13Z","corr_author":"1","publisher":"Springer Nature","day":"01","department":[{"_id":"JaMa"}],"pmid":1,"scopus_import":"1","acknowledgement":"The authors want to thank the organizers of YMC*A 2023 in Leuven, where this collaboration was conceived. They are grateful to Dan Voiculescu for a valuable historical remark and to Zhiyuan Yang for raising the question if operator-valued weights give rise to Tomita correspondences. R.K. was funded by IIT Kanpur through the Institute Postdoctoral Fellowship. M. W. was funded by the Austrian Science Fund (FWF) under the Esprit Programme [ESP 156]. For the purpose of Open Access, the authors have applied a CC BY public copyright licence to any Author Accepted Manuscript (AAM) version arising from this submission.\r\nOpen Access funding enabled and organized by Projekt DEAL.","project":[{"grant_number":"ESP156_N","name":"Gradient flow techniques for quantum Markov semigroups","_id":"34c6ea2d-11ca-11ed-8bc3-c04f3c502833"}],"isi":1,"publication":"Communications in Mathematical Physics","language":[{"iso":"eng"}],"ddc":["510"],"article_type":"original","publication_status":"published","arxiv":1,"citation":{"chicago":"Kumar, R. Rahul, and Melchior Wirth. “Operator-Valued Twisted Araki–Woods Algebras.” Communications in Mathematical Physics. Springer Nature, 2025. https://doi.org/10.1007/s00220-025-05285-7.","mla":"Kumar, R. Rahul, and Melchior Wirth. “Operator-Valued Twisted Araki–Woods Algebras.” Communications in Mathematical Physics, vol. 406, no. 5, 110, Springer Nature, 2025, doi:10.1007/s00220-025-05285-7.","ama":"Kumar RR, Wirth M. Operator-valued twisted Araki–Woods algebras. Communications in Mathematical Physics. 2025;406(5). doi:10.1007/s00220-025-05285-7","apa":"Kumar, R. R., & Wirth, M. (2025). Operator-valued twisted Araki–Woods algebras. Communications in Mathematical Physics. Springer Nature. https://doi.org/10.1007/s00220-025-05285-7","ieee":"R. R. Kumar and M. Wirth, “Operator-valued twisted Araki–Woods algebras,” Communications in Mathematical Physics, vol. 406, no. 5. Springer Nature, 2025.","ista":"Kumar RR, Wirth M. 2025. Operator-valued twisted Araki–Woods algebras. Communications in Mathematical Physics. 406(5), 110.","short":"R.R. Kumar, M. Wirth, Communications in Mathematical Physics 406 (2025)."},"intvolume":" 406","file":[{"creator":"dernst","relation":"main_file","content_type":"application/pdf","file_size":650764,"file_id":"19650","file_name":"2025_CommMathPhysics_Kumar.pdf","checksum":"2948e8f567f20f5f837061d2c775534f","date_created":"2025-05-05T09:20:54Z","access_level":"open_access","date_updated":"2025-05-05T09:20:54Z","success":1}],"year":"2025","abstract":[{"lang":"eng","text":"We introduce operator-valued twisted Araki–Woods algebras. These are operator-valued versions of a class of second quantization algebras that includes q-Gaussian and q-Araki–Woods algebras and also generalize Shlyakhtenko’s von Neumann algebras generated by operator-valued semicircular variables. We develop a disintegration theory that reduces the isomorphism type of operator-valued twisted Araki–Woods algebras over type I factors to the scalar-valued case. Moreover, these algebras come with a natural weight, and we characterize its modular theory. We also give sufficient criteria that guarantee the factoriality of these algebras."}],"external_id":{"isi":["001464170400003"],"arxiv":["2406.06179"],"pmid":["40225194"]},"publication_identifier":{"eissn":["1432-0916"],"issn":["0010-3616"]},"title":"Operator-valued twisted Araki–Woods algebras","file_date_updated":"2025-05-05T09:20:54Z","oa":1,"OA_type":"hybrid","OA_place":"publisher","article_number":"110","issue":"5","volume":406,"type":"journal_article","status":"public","date_updated":"2025-09-30T12:19:22Z","_id":"19625","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"date_published":"2025-05-01T00:00:00Z","doi":"10.1007/s00220-025-05285-7"},{"publication":"Proceedings of the National Academy of Sciences","language":[{"iso":"eng"}],"ddc":["570"],"publication_status":"published","article_type":"original","pmid":1,"day":"15","publisher":"National Academy of Sciences","department":[{"_id":"CaGu"},{"_id":"Bio"},{"_id":"FyKo"},{"_id":"GaTk"}],"acknowledgement":"K.J. thanks B. Wu, I. Tomanek, K. Tomasek for detailed discussions on the manuscript, all other members from the Guet laboratory for valuable feedback, R. Chait, & Imaging and Optics Facility, Institute of Science and Technology Austria for helping with microscopy, Dr. Sudha Rao and Dr. Raja Mugasimangalam, Genotypic Technology India for allowing time off to address the revisions. K.J. acknowledges Institute of Science and Technology fellowship IC1006FELL02, R.H. was supported in part by Chan Zuckerberg Initiative and Donor Advised-Fund grant 2020-225401 (https://doi.org/10.37921/120055ratwvi), O.O.B. acknowledges Fonds Zur Förderung der Wissenschaftlichen Forschung (FWF) Grant ESP253-B, R.R. acknowledges FWF Grant 10.55776/ESP219, C.C.G. acknowledges FWF I5127-B.","isi":1,"project":[{"grant_number":"CZI01","name":"Tools for automation and feedback microscopy","_id":"c08e9ad1-5a5b-11eb-8a69-9d1cf3b07473"},{"grant_number":"E219","_id":"bd6f94d1-d553-11ed-ba76-ae9f07250f74","name":"Non-canonical antibiotic interactions"},{"grant_number":"I05127","_id":"34e076d6-11ca-11ed-8bc3-aec76c41a181","name":"Evolutionary analysis of gene regulation"}],"scopus_import":"1","has_accepted_license":"1","author":[{"id":"330F0278-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-3809-0449","last_name":"Jain","first_name":"Kirti","full_name":"Jain, Kirti"},{"orcid":"0000-0001-9843-3522","last_name":"Hauschild","id":"4E01D6B4-F248-11E8-B48F-1D18A9856A87","full_name":"Hauschild, Robert","first_name":"Robert"},{"full_name":"Bochkareva, Olga","first_name":"Olga","orcid":"0000-0003-1006-6639","last_name":"Bochkareva","id":"C4558D3C-6102-11E9-A62E-F418E6697425"},{"orcid":"0000-0001-9480-5261","last_name":"Römhild","id":"68E56E44-62B0-11EA-B963-444F3DDC885E","first_name":"Roderich","full_name":"Römhild, Roderich"},{"full_name":"Tkačik, Gašper","first_name":"Gašper","id":"3D494DCA-F248-11E8-B48F-1D18A9856A87","last_name":"Tkačik","orcid":"0000-0002-6699-1455"},{"first_name":"Calin C","full_name":"Guet, Calin C","orcid":"0000-0001-6220-2052","id":"47F8433E-F248-11E8-B48F-1D18A9856A87","last_name":"Guet"}],"corr_author":"1","date_created":"2025-04-27T22:02:13Z","acknowledged_ssus":[{"_id":"Bio"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"Yes (in subscription journal)","oa_version":"Published Version","fulldoi":"https://doi.org/10.1073/pnas.2413709122","month":"04","quality_controlled":"1","volume":122,"article_number":"e2413709122","issue":"15","_id":"19626","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"date_published":"2025-04-15T00:00:00Z","doi":"10.1073/pnas.2413709122","related_material":{"link":[{"description":"News on ISTA website","url":"https://ista.ac.at/en/news/clockwork-just-for-antibiotic-resistance/","relation":"press_release"}],"record":[{"relation":"research_data","id":"19294","status":"public"}]},"status":"public","type":"journal_article","date_updated":"2026-05-20T08:33:08Z","abstract":[{"lang":"eng","text":"Active regulation of gene expression, orchestrated by complex interactions of activators and repressors at promoters, controls the fate of organisms. In contrast, basal expression at uninduced promoters is considered to be a dynamically inert mode of nonfunctional “promoter leakiness,” merely a byproduct of transcriptional regulation. Here, we investigate the basal expression mode of the mar operon, the main regulator of intrinsic multiple antibiotic resistance in Escherichia coli, and link its dynamic properties to the noncanonical, yet highly conserved start codon of marR across Enterobacteriaceae. Real-time, single-cell measurements across tens of generations reveal that basal expression consists of rare stochastic gene expression pulses, which maximize variability in wildtype and, surprisingly, transiently accelerate cellular elongation rates. Competition experiments show that basal expression confers fitness advantages to wildtype across several transitions between exponential and stationary growth by shortening lag times. The dynamically rich basal expression of the mar operon has likely been evolutionarily maintained for its role in growth homeostasis of Enterobacteria within the gut environment, thereby allowing other ancillary gene regulatory roles to evolve, e.g., control of costly-to-induce multidrug efflux pumps. Understanding the complex selection forces governing genetic systems involved in intrinsic multidrug resistance is crucial for effective public health measures."}],"external_id":{"pmid":["40193613"],"isi":["001471235200001"]},"OA_place":"publisher","OA_type":"hybrid","title":"Pulsatile basal gene expression as a fitness determinant in bacteria","publication_identifier":{"issn":["0027-8424"],"eissn":["1091-6490"]},"file_date_updated":"2025-06-24T07:27:43Z","oa":1,"year":"2025","APC_amount":"5949 EUR","citation":{"chicago":"Jain, Kirti, Robert Hauschild, Olga Bochkareva, Roderich Römhild, Gašper Tkačik, and Calin C Guet. “Pulsatile Basal Gene Expression as a Fitness Determinant in Bacteria.” Proceedings of the National Academy of Sciences. National Academy of Sciences, 2025. https://doi.org/10.1073/pnas.2413709122.","mla":"Jain, Kirti, et al. “Pulsatile Basal Gene Expression as a Fitness Determinant in Bacteria.” Proceedings of the National Academy of Sciences, vol. 122, no. 15, e2413709122, National Academy of Sciences, 2025, doi:10.1073/pnas.2413709122.","ama":"Jain K, Hauschild R, Bochkareva O, Römhild R, Tkačik G, Guet CC. Pulsatile basal gene expression as a fitness determinant in bacteria. Proceedings of the National Academy of Sciences. 2025;122(15). doi:10.1073/pnas.2413709122","apa":"Jain, K., Hauschild, R., Bochkareva, O., Römhild, R., Tkačik, G., & Guet, C. C. (2025). Pulsatile basal gene expression as a fitness determinant in bacteria. Proceedings of the National Academy of Sciences. National Academy of Sciences. https://doi.org/10.1073/pnas.2413709122","ieee":"K. Jain, R. Hauschild, O. Bochkareva, R. Römhild, G. Tkačik, and C. C. 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Roos, R. Seiringer, Forum of Mathematics, Sigma 13 (2025).","ista":"Roos B, Seiringer R. 2025. Enhanced superconductivity at a corner for the linear BCS equation. Forum of Mathematics, Sigma. 13, e71.","ieee":"B. Roos and R. Seiringer, “Enhanced superconductivity at a corner for the linear BCS equation,” Forum of Mathematics, Sigma, vol. 13. Cambridge University Press, 2025.","apa":"Roos, B., & Seiringer, R. (2025). Enhanced superconductivity at a corner for the linear BCS equation. Forum of Mathematics, Sigma. Cambridge University Press. https://doi.org/10.1017/fms.2024.145","ama":"Roos B, Seiringer R. Enhanced superconductivity at a corner for the linear BCS equation. 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We prove that at weak coupling the critical temperature for a sample confined to a quadrant in two dimensions is strictly larger than the one for a half-space, which in turn is strictly larger than the one for R^2. Furthermore, we prove that the relative difference of the critical temperatures vanishes in the weak coupling limit.","lang":"eng"}],"external_id":{"isi":["001465985500001"],"arxiv":["2308.07115"]}},{"scopus_import":"1","acknowledgement":"This work was supported by the Guangdong Basic and Applied Basic Research Foundation (2023A1515110828) and the Generalitat de Catalunya (2021SGR01581). This research was supported by the Scientific Service Units (SSU) of ISTA Austria through resources provided by the Electron Microscopy Facility (EMF) and the Nanofabrication Facility (NFF).","isi":1,"department":[{"_id":"MaIb"}],"day":"16","publisher":"American Chemical Society","pmid":1,"language":[{"iso":"eng"}],"article_type":"original","publication_status":"published","publication":"ACS Nano","fulldoi":"https://doi.org/10.1021/acsnano.5c03074","quality_controlled":"1","month":"04","article_processing_charge":"No","oa_version":"None","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","date_created":"2025-04-27T22:02:14Z","page":"16096-16109","acknowledged_ssus":[{"_id":"EM-Fac"},{"_id":"NanoFab"}],"author":[{"full_name":"Li, Jing","first_name":"Jing","last_name":"Li"},{"full_name":"Zeng, Guifang","first_name":"Guifang","last_name":"Zeng"},{"full_name":"Horta, Sharona","first_name":"Sharona","id":"03a7e858-01b1-11ec-8b71-99ae6c4a05bc","last_name":"Horta"},{"last_name":"Martínez-Alanis","full_name":"Martínez-Alanis, Paulina R.","first_name":"Paulina R."},{"last_name":"Jacas Biendicho","full_name":"Jacas Biendicho, Jordi","first_name":"Jordi"},{"last_name":"Ibáñez","id":"43C61214-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5013-2843","full_name":"Ibáñez, Maria","first_name":"Maria"},{"full_name":"Xu, Bingang","first_name":"Bingang","last_name":"Xu"},{"full_name":"Ci, Lijie","first_name":"Lijie","last_name":"Ci"},{"last_name":"Cabot","full_name":"Cabot, Andreu","first_name":"Andreu"},{"last_name":"Sun","full_name":"Sun, Qing","first_name":"Qing"}],"title":"Crystallographic engineering in micron-sized SiOx anode material toward stable high-energy-density Lithium-Ion batteries","publication_identifier":{"issn":["1936-0851"],"eissn":["1936-086X"]},"OA_type":"closed access","abstract":[{"lang":"eng","text":"The SiOx anode exhibits a high specific capacity and commendable durability for lithium-ion batteries (LIBs). However, its practical application is hindered by significant volumetric fluctuations during lithiation/delithiation, alongside a metastable nature, which induces mechanical instability and irreversible lithium consumption, ultimately impairing long-term capacity retention in full-battery cell configurations. In this study, we present a phase-engineering approach designed to improve the structural stability of SiOx anodes for LIB applications. By incorporating lithium fluoride, amorphous SiOx undergoes partial transformation into a quartz-like phase, which enhances mechanical integrity and mitigates irreversible lithium loss. This modified anode demonstrates significantly improved stability and prolonged cycle lifespan. Through a combination of multiscale simulations and in situ characterizations, we elucidate the stabilization mechanisms conferred by the quartz phase, providing critical insights into the role of SiOx’s crystal structure in influencing degradation pathways. This work introduces an accessible and efficient method for controlling the crystallinity of SiOx, offering a practical solution to enhance the durability of high-energy-density LIBs."}],"external_id":{"isi":["001468606700001"],"pmid":["40237414"]},"status":"public","type":"journal_article","date_updated":"2025-09-30T12:19:51Z","_id":"19629","date_published":"2025-04-16T00:00:00Z","doi":"10.1021/acsnano.5c03074","issue":"16","volume":19,"intvolume":" 19","citation":{"apa":"Li, J., Zeng, G., Horta, S., Martínez-Alanis, P. R., Jacas Biendicho, J., Ibáñez, M., … Sun, Q. (2025). Crystallographic engineering in micron-sized SiOx anode material toward stable high-energy-density Lithium-Ion batteries. ACS Nano. American Chemical Society. https://doi.org/10.1021/acsnano.5c03074","ieee":"J. Li et al., “Crystallographic engineering in micron-sized SiOx anode material toward stable high-energy-density Lithium-Ion batteries,” ACS Nano, vol. 19, no. 16. American Chemical Society, pp. 16096–16109, 2025.","ista":"Li J, Zeng G, Horta S, Martínez-Alanis PR, Jacas Biendicho J, Ibáñez M, Xu B, Ci L, Cabot A, Sun Q. 2025. Crystallographic engineering in micron-sized SiOx anode material toward stable high-energy-density Lithium-Ion batteries. ACS Nano. 19(16), 16096–16109.","short":"J. Li, G. Zeng, S. Horta, P.R. Martínez-Alanis, J. Jacas Biendicho, M. Ibáñez, B. Xu, L. Ci, A. Cabot, Q. Sun, ACS Nano 19 (2025) 16096–16109.","chicago":"Li, Jing, Guifang Zeng, Sharona Horta, Paulina R. Martínez-Alanis, Jordi Jacas Biendicho, Maria Ibáñez, Bingang Xu, Lijie Ci, Andreu Cabot, and Qing Sun. “Crystallographic Engineering in Micron-Sized SiOx Anode Material toward Stable High-Energy-Density Lithium-Ion Batteries.” ACS Nano. American Chemical Society, 2025. https://doi.org/10.1021/acsnano.5c03074.","ama":"Li J, Zeng G, Horta S, et al. Crystallographic engineering in micron-sized SiOx anode material toward stable high-energy-density Lithium-Ion batteries. ACS Nano. 2025;19(16):16096-16109. doi:10.1021/acsnano.5c03074","mla":"Li, Jing, et al. “Crystallographic Engineering in Micron-Sized SiOx Anode Material toward Stable High-Energy-Density Lithium-Ion Batteries.” ACS Nano, vol. 19, no. 16, American Chemical Society, 2025, pp. 16096–109, doi:10.1021/acsnano.5c03074."},"year":"2025"},{"intvolume":" 59","file":[{"success":1,"checksum":"e2c21a3d7ae1438b2061eb0fc95e63b7","file_name":"2025_ExperimentalAstronomy_Rauer.pdf","file_id":"19652","date_updated":"2025-05-05T10:42:05Z","date_created":"2025-05-05T10:42:05Z","access_level":"open_access","content_type":"application/pdf","relation":"main_file","file_size":6305300,"creator":"dernst"}],"citation":{"short":"H. Rauer, C. Aerts, J. Cabrera, M. Deleuil, A. Erikson, L. Gizon, M. Goupil, A. Heras, T. Walloschek, J. Lorenzo-Alvarez, F. Marliani, C. Martin-Garcia, J.M. 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Valio, Á.L. Valverde Guijarro, V. Van Eylen, V. Van Grootel, T.A. Van Kempen, T. Van Reeth, I. Van Zelst, B. Vandenbussche, K. Vasiliou, V. Vasilyev, D. Vaz De Mascarenhas, A. Vazan, M. Vela Nunez, E.N. Velloso, R. Ventura, P. Ventura, J. Venturini, I. Vera Trallero, D. Veras, E. Verdugo, K. Verma, D. Vibert, T. Vicanek Martinez, K. Vida, A. Vigan, A. Villacorta, E. Villaver, M. Villaverde Aparicio, V. Viotto, E. Vorobyov, S. Vorontsov, F.W. Wagner, N. Walton, D. Walton, H. Wang, R. Waters, C. Watson, S. Wedemeyer, A. Weeks, J. Weingrill, A. Weiss, B. Wendler, R. West, K. Westerdorff, P.A. Westphal, P. Wheatley, T. White, A. Whittaker, K. Wickhusen, T. Wilson, J. Windsor, O. Winter, M.L. Winther, A. Winton, U. Witteck, V. Witzke, P. Woitke, D. Wolter, G. Wuchterl, M. Wyatt, D. Yang, J. Yu, R. Zanmar Sanchez, M.R. Zapatero Osorio, M. Zechmeister, Y. Zhou, C. Ziemke, K. Zwintz, T. Böhm, L.M. Dansac, Experimental Astronomy 59 (2025).","ista":"Rauer H et al. 2025. The PLATO mission. Experimental Astronomy. 59(3), 26.","ieee":"H. Rauer et al., “The PLATO mission,” Experimental Astronomy, vol. 59, no. 3. Springer Nature, 2025.","apa":"Rauer, H., Aerts, C., Cabrera, J., Deleuil, M., Erikson, A., Gizon, L., … Dansac, L. M. (2025). The PLATO mission. Experimental Astronomy. Springer Nature. https://doi.org/10.1007/s10686-025-09985-9","mla":"Rauer, Heike, et al. “The PLATO Mission.” Experimental Astronomy, vol. 59, no. 3, 26, Springer Nature, 2025, doi:10.1007/s10686-025-09985-9.","ama":"Rauer H, Aerts C, Cabrera J, et al. The PLATO mission. Experimental Astronomy. 2025;59(3). doi:10.1007/s10686-025-09985-9","chicago":"Rauer, Heike, Conny Aerts, Juan Cabrera, Magali Deleuil, Anders Erikson, Laurent Gizon, Mariejo Goupil, et al. “The PLATO Mission.” Experimental Astronomy. Springer Nature, 2025. https://doi.org/10.1007/s10686-025-09985-9."},"year":"2025","title":"The PLATO mission","publication_identifier":{"eissn":["1572-9508"],"issn":["0922-6435"]},"file_date_updated":"2025-05-05T10:42:05Z","oa":1,"OA_type":"hybrid","OA_place":"publisher","abstract":[{"text":"PLATO (PLAnetary Transits and Oscillations of stars) is ESA’s M3 mission designed to detect and characterise extrasolar planets and perform asteroseismic monitoring of a large number of stars. PLATO will detect small planets (down to <2R Earth) around bright stars (<11 mag), including terrestrial planets in the habitable zone of solar-like stars. With the complement of radial velocity observations from the ground, planets will be characterised for their radius, mass, and age with high accuracy (5%, 10%, 10% for an Earth-Sun combination respectively). PLATO will provide us with a large-scale catalogue of well-characterised small planets up to intermediate orbital periods, relevant for a meaningful comparison to planet formation theories and to better understand planet evolution. It will make possible comparative exoplanetology to place our Solar System planets in a broader context. In parallel, PLATO will study (host) stars using asteroseismology, allowing us to determine the stellar properties with high accuracy, substantially enhancing our knowledge of stellar structure and evolution. The payload instrument consists of 26 cameras with 12cm aperture each. For at least four years, the mission will perform high-precision photometric measurements. Here we review the science objectives, present PLATO‘s target samples and fields, provide an overview of expected core science performance as well as a description of the instrument and the mission profile towards the end of the serial production of the flight cameras. PLATO is scheduled for a launch date end 2026. This overview therefore provides a summary of the mission to the community in preparation of the upcoming operational phases.","lang":"eng"}],"external_id":{"isi":["001498306700001"]},"status":"public","type":"journal_article","date_updated":"2026-04-02T11:44:00Z","_id":"19637","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"date_published":"2025-04-21T00:00:00Z","doi":"10.1007/s10686-025-09985-9","article_number":"26","issue":"3","volume":59,"month":"04","fulldoi":"https://doi.org/10.1007/s10686-025-09985-9","quality_controlled":"1","article_processing_charge":"Yes (via OA deal)","oa_version":"Published Version","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","date_created":"2025-05-04T22:02:30Z","has_accepted_license":"1","author":[{"last_name":"Rauer","first_name":"Heike","full_name":"Rauer, Heike"},{"last_name":"Aerts","first_name":"Conny","full_name":"Aerts, Conny"},{"full_name":"Cabrera, Juan","first_name":"Juan","last_name":"Cabrera"},{"last_name":"Deleuil","first_name":"Magali","full_name":"Deleuil, Magali"},{"last_name":"Erikson","first_name":"Anders","full_name":"Erikson, Anders"},{"full_name":"Gizon, Laurent","first_name":"Laurent","last_name":"Gizon"},{"last_name":"Goupil","first_name":"Mariejo","full_name":"Goupil, Mariejo"},{"full_name":"Heras, Ana","first_name":"Ana","last_name":"Heras"},{"last_name":"Walloschek","first_name":"Thomas","full_name":"Walloschek, Thomas"},{"last_name":"Lorenzo-Alvarez","full_name":"Lorenzo-Alvarez, Jose","first_name":"Jose"},{"first_name":"Filippo","full_name":"Marliani, Filippo","last_name":"Marliani"},{"full_name":"Martin-Garcia, César","first_name":"César","last_name":"Martin-Garcia"},{"first_name":"J. Miguel","full_name":"Mas-Hesse, J. Miguel","last_name":"Mas-Hesse"},{"first_name":"Laurence","full_name":"O’Rourke, Laurence","last_name":"O’Rourke"},{"first_name":"Hugh","full_name":"Osborn, Hugh","last_name":"Osborn"},{"first_name":"Isabella","full_name":"Pagano, Isabella","last_name":"Pagano"},{"last_name":"Piotto","first_name":"Giampaolo","full_name":"Piotto, Giampaolo"},{"full_name":"Pollacco, Don","first_name":"Don","last_name":"Pollacco"},{"full_name":"Ragazzoni, Roberto","first_name":"Roberto","last_name":"Ragazzoni"},{"full_name":"Ramsay, Gavin","first_name":"Gavin","last_name":"Ramsay"},{"first_name":"Stéphane","full_name":"Udry, Stéphane","last_name":"Udry"},{"last_name":"Appourchaux","first_name":"Thierry","full_name":"Appourchaux, Thierry"},{"last_name":"Benz","full_name":"Benz, Willy","first_name":"Willy"},{"first_name":"Alexis","full_name":"Brandeker, Alexis","last_name":"Brandeker"},{"full_name":"Güdel, Manuel","first_name":"Manuel","last_name":"Güdel"},{"first_name":"Eduardo","full_name":"Janot-Pacheco, 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Rosa"},{"last_name":"Zechmeister","full_name":"Zechmeister, Mathias","first_name":"Mathias"},{"last_name":"Zhou","full_name":"Zhou, Yixiao","first_name":"Yixiao"},{"first_name":"Claas","full_name":"Ziemke, Claas","last_name":"Ziemke"},{"full_name":"Zwintz, Konstanze","first_name":"Konstanze","last_name":"Zwintz"},{"full_name":"Böhm, Torsten","first_name":"Torsten","last_name":"Böhm"},{"first_name":"Léo Michel","full_name":"Dansac, Léo Michel","last_name":"Dansac"}],"scopus_import":"1","acknowledgement":"Open Access funding enabled and organized by Projekt DEAL.","isi":1,"publisher":"Springer Nature","day":"21","department":[{"_id":"LiBu"}],"ddc":["520"],"language":[{"iso":"eng"}],"publication_status":"published","article_type":"original","publication":"Experimental Astronomy"},{"isi":1,"acknowledgement":"We thank the anonymous referee for a careful reading of our manuscript and for comments that helped improve this Letter. This work is supported by the Japan Society for the Promotion of Science (JSPS) KAKENHI grant No. 24KF0130. We acknowledge support from the National Natural Science Foundation of China (12073003, 12003003, 11721303, 11991052, 11950410493), and the China Manned Space Project (CMS-CSST-2021-A04 and CMS-CSST-2021-A06). L.C.H. is supported by the National Science Foundation of China (12233001), the National Key R&D Program of China (2022YFF0503401). Z.H. acknowledges support by US NSF grant AST-2006176 and by NASA grant 80NSSC22K0822. Some of the numerical calculation and analysis were performed with the Cray XC50 at the Center for Computational Astrophysics (CfCA) of the National Astronomical Observatory of Japan and with the High-performance Computing Platform of Peking University.","scopus_import":"1","day":"20","publisher":"IOP Publishing","department":[{"_id":"ZoHa"}],"publication_status":"published","article_type":"letter_note","ddc":["520"],"language":[{"iso":"eng"}],"publication":"The Astrophysical Journal Letters","oa_version":"Published Version","article_processing_charge":"Yes","month":"04","fulldoi":"https://doi.org/10.3847/2041-8213/adc680","quality_controlled":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2025-05-04T22:02:31Z","author":[{"full_name":"Hu, Haojie","first_name":"Haojie","last_name":"Hu"},{"last_name":"Inayoshi","first_name":"Kohei","full_name":"Inayoshi, Kohei"},{"id":"7c006e8c-cc0d-11ee-8322-cb904ef76f36","orcid":"0000-0003-3633-5403","last_name":"Haiman","full_name":"Haiman, Zoltán","first_name":"Zoltán"},{"last_name":"Ho","first_name":"Luis C.","full_name":"Ho, Luis C."},{"last_name":"Ohsuga","full_name":"Ohsuga, Ken","first_name":"Ken"}],"has_accepted_license":"1","OA_type":"gold","OA_place":"publisher","oa":1,"title":"The convergence of heavy and light seeds to overmassive black holes at cosmic dawn","file_date_updated":"2025-05-05T11:30:34Z","publication_identifier":{"issn":["2041-8205"],"eissn":["2041-8213"]},"external_id":{"isi":["001467616800001"],"arxiv":["2503.03870"]},"abstract":[{"lang":"eng","text":"The James Webb Space Telescope has revealed low-luminosity active galactic nuclei at redshifts of z ≳ 4–7, many of which host accreting massive black holes (BHs) with BH-to-galaxy mass (MBH/M⋆) ratios exceeding the local values by more than an order of magnitude. The origin of these overmassive BHs remains unclear but requires potential contributions from heavy seeds and/or episodes of super-Eddington accretion. We present a growth model coupled with dark matter halo assembly to explore the evolution of the MBH/M⋆ ratio under different seeding and feedback scenarios. Given the gas inflow rates in protogalaxies, BHs grow episodically at moderate super-Eddington rates, and the mass ratio increases early on, despite significant mass loss through feedback. Regardless of seeding mechanisms, the mass ratio converges to a universal value ∼0.1–0.3, set by the balance between gas feeding and star formation efficiency in the nucleus. This behavior defines an attractor in the MBH–M⋆ diagram, where overmassive BHs grow more slowly than their hosts, while undermassive seeds experience rapid growth before aligning with the attractor. We derive an analytical expression for the universal mass ratio, linking it to feedback strength and halo growth. The convergence of evolutionary tracks erases seeding information from the mass ratio by z ∼ 4–6. Detecting BHs with ∼105−6 M⊙ at higher redshifts that deviate from the convergence trend would provide key diagnostics of their birth conditions."}],"doi":"10.3847/2041-8213/adc680","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"date_published":"2025-04-20T00:00:00Z","_id":"19638","date_updated":"2026-02-16T12:44:04Z","status":"public","type":"journal_article","volume":983,"article_number":"L37","issue":"2","file":[{"creator":"dernst","file_size":3334014,"relation":"main_file","content_type":"application/pdf","date_created":"2025-05-05T11:30:34Z","access_level":"open_access","date_updated":"2025-05-05T11:30:34Z","file_id":"19655","file_name":"2025_AstrophysicalJourLetters_Hu.pdf","checksum":"1a4fbeeb12e9022873e86c72d230a5ec","success":1}],"DOAJ_listed":"1","intvolume":" 983","citation":{"short":"H. Hu, K. Inayoshi, Z. Haiman, L.C. Ho, K. Ohsuga, The Astrophysical Journal Letters 983 (2025).","apa":"Hu, H., Inayoshi, K., Haiman, Z., Ho, L. C., & Ohsuga, K. (2025). The convergence of heavy and light seeds to overmassive black holes at cosmic dawn. The Astrophysical Journal Letters. IOP Publishing. https://doi.org/10.3847/2041-8213/adc680","ieee":"H. Hu, K. Inayoshi, Z. Haiman, L. C. Ho, and K. Ohsuga, “The convergence of heavy and light seeds to overmassive black holes at cosmic dawn,” The Astrophysical Journal Letters, vol. 983, no. 2. IOP Publishing, 2025.","ista":"Hu H, Inayoshi K, Haiman Z, Ho LC, Ohsuga K. 2025. The convergence of heavy and light seeds to overmassive black holes at cosmic dawn. The Astrophysical Journal Letters. 983(2), L37.","mla":"Hu, Haojie, et al. “The Convergence of Heavy and Light Seeds to Overmassive Black Holes at Cosmic Dawn.” The Astrophysical Journal Letters, vol. 983, no. 2, L37, IOP Publishing, 2025, doi:10.3847/2041-8213/adc680.","ama":"Hu H, Inayoshi K, Haiman Z, Ho LC, Ohsuga K. The convergence of heavy and light seeds to overmassive black holes at cosmic dawn. The Astrophysical Journal Letters. 2025;983(2). doi:10.3847/2041-8213/adc680","chicago":"Hu, Haojie, Kohei Inayoshi, Zoltán Haiman, Luis C. Ho, and Ken Ohsuga. “The Convergence of Heavy and Light Seeds to Overmassive Black Holes at Cosmic Dawn.” The Astrophysical Journal Letters. IOP Publishing, 2025. https://doi.org/10.3847/2041-8213/adc680."},"arxiv":1,"year":"2025"},{"APC_amount":"3237,62 EUR","year":"2025","citation":{"ama":"Confavreux BJ, Agnes EJ, Zenke F, Sprekeler H, Vogels TP. Balancing complexity, performance and plausibility to meta learn plasticity rules in recurrent spiking networks. PLoS Computational Biology. 2025;21(4). doi:10.1371/journal.pcbi.1012910","mla":"Confavreux, Basile J., et al. “Balancing Complexity, Performance and Plausibility to Meta Learn Plasticity Rules in Recurrent Spiking Networks.” PLoS Computational Biology, vol. 21, no. 4, e1012910, Public Library of Science, 2025, doi:10.1371/journal.pcbi.1012910.","chicago":"Confavreux, Basile J, Everton J. Agnes, Friedemann Zenke, Henning Sprekeler, and Tim P Vogels. “Balancing Complexity, Performance and Plausibility to Meta Learn Plasticity Rules in Recurrent Spiking Networks.” PLoS Computational Biology. Public Library of Science, 2025. https://doi.org/10.1371/journal.pcbi.1012910.","short":"B.J. Confavreux, E.J. Agnes, F. Zenke, H. Sprekeler, T.P. Vogels, PLoS Computational Biology 21 (2025).","apa":"Confavreux, B. J., Agnes, E. J., Zenke, F., Sprekeler, H., & Vogels, T. P. (2025). Balancing complexity, performance and plausibility to meta learn plasticity rules in recurrent spiking networks. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1012910","ieee":"B. J. Confavreux, E. J. Agnes, F. Zenke, H. Sprekeler, and T. P. Vogels, “Balancing complexity, performance and plausibility to meta learn plasticity rules in recurrent spiking networks,” PLoS Computational Biology, vol. 21, no. 4. Public Library of Science, 2025.","ista":"Confavreux BJ, Agnes EJ, Zenke F, Sprekeler H, Vogels TP. 2025. Balancing complexity, performance and plausibility to meta learn plasticity rules in recurrent spiking networks. PLoS Computational Biology. 21(4), e1012910."},"PlanS_conform":"1","intvolume":" 21","ec_funded":1,"file":[{"content_type":"application/pdf","relation":"main_file","file_size":9771636,"creator":"dernst","success":1,"checksum":"6437a1aab52813ab7e310e3b4fb36e3b","file_id":"19654","file_name":"2025_PLoSCompBio_Confavreux.pdf","date_updated":"2025-05-05T11:17:49Z","access_level":"open_access","date_created":"2025-05-05T11:17:49Z"}],"DOAJ_listed":"1","issue":"4","article_number":"e1012910","volume":21,"status":"public","type":"journal_article","related_material":{"link":[{"relation":"software","url":"https://github.com/VogelsLab/SpikES"}]},"date_updated":"2026-05-06T13:17:52Z","_id":"19640","doi":"10.1371/journal.pcbi.1012910","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"date_published":"2025-04-24T00:00:00Z","abstract":[{"text":"Synaptic plasticity is a key player in the brain’s life-long learning abilities. However, due to experimental limitations, the mechanistic link between synaptic plasticity rules and the network-level computations they enable remain opaque. Here we use evolutionary strategies (ES) to meta learn local co-active plasticity rules in large recurrent spiking networks with excitatory (E) and inhibitory (I) neurons, using parameterizations of increasing complexity. We discover rules that robustly stabilize network dynamics for all four synapse types acting in isolation (E-to-E, E-to-I, I-to-E and I-to-I). More complex functions such as familiarity detection can also be included in the search constraints. However, our meta learning strategy begins to fail for co-active rules of increasing complexity, as it is challenging to devise loss functions that effectively constrain network dynamics to plausible solutions a priori. Moreover, in line with previous work, we can find multiple degenerate solutions with identical network behaviour. As a local optimization strategy, ES provides one solution at a time and makes exploration of this degeneracy cumbersome. Regardless, we can glean the interdependecies of various plasticity parameters by considering the covariance matrix learned alongside the optimal rule with ES. Our work provides a proof of principle for the success of machine-learning-guided discovery of plasticity rules in large spiking networks, and points at the necessity of more elaborate search strategies going forward.","lang":"eng"}],"external_id":{"isi":["001474257000002"],"pmid":["40273284 "]},"title":"Balancing complexity, performance and plausibility to meta learn plasticity rules in recurrent spiking networks","file_date_updated":"2025-05-05T11:17:49Z","publication_identifier":{"issn":["1553-734X"],"eissn":["1553-7358"]},"oa":1,"OA_type":"gold","OA_place":"publisher","has_accepted_license":"1","author":[{"full_name":"Confavreux, Basile J","first_name":"Basile J","id":"C7610134-B532-11EA-BD9F-F5753DDC885E","last_name":"Confavreux"},{"full_name":"Agnes, Everton J.","first_name":"Everton J.","last_name":"Agnes"},{"last_name":"Zenke","full_name":"Zenke, Friedemann","first_name":"Friedemann"},{"last_name":"Sprekeler","full_name":"Sprekeler, Henning","first_name":"Henning"},{"full_name":"Vogels, Tim P","first_name":"Tim P","last_name":"Vogels","id":"CB6FF8D2-008F-11EA-8E08-2637E6697425","orcid":"0000-0003-3295-6181"}],"date_created":"2025-05-04T22:02:31Z","corr_author":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","quality_controlled":"1","fulldoi":"https://doi.org/10.1371/journal.pcbi.1012910","month":"04","article_processing_charge":"Yes","oa_version":"Published Version","publication":"PLoS Computational Biology","ddc":["570"],"language":[{"iso":"eng"}],"publication_status":"published","article_type":"original","publisher":"Public Library of Science","day":"24","department":[{"_id":"TiVo"}],"pmid":1,"scopus_import":"1","acknowledgement":"We would like to thank Chaitanya Chintaluri, Nicoleta Condruz and Douglas Feitosa Tomé for insightful discussions. This project has received funding from the HORIZON EUROPE European Research Council (ERC) consolidator grant\r\n(SYNAPSEEK, awarded to TV), a Wellcome Trust Sir Henry Dale Research Fellowship (WT100000, awarded to TV), a Wellcome Trust Senior Research Fellowship (214316/Z/18/Z, awarded to TV), and a Sir Henry Wellcome\r\nFellowship (110124/Z/15/Z, awarded to FZ). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.","isi":1,"project":[{"grant_number":"819603","call_identifier":"H2020","_id":"0aacfa84-070f-11eb-9043-d7eb2c709234","name":"Learning the shape of synaptic plasticity rules for neuronal architectures and function through machine learning."},{"grant_number":"214316/Z/18/Z","_id":"c084a126-5a5b-11eb-8a69-d75314a70a87","name":"What’s in a memory? Spatiotemporal dynamics in strongly coupled recurrent neuronal networks."}]},{"publication":"Mycorrhiza","publication_status":"published","article_type":"original","language":[{"iso":"eng"}],"publisher":"Springer Nature","day":"01","department":[{"_id":"NiBa"}],"pmid":1,"scopus_import":"1","isi":1,"acknowledgement":"We thank Sergey Tsurikov for the help with stable isotope analysis. Dr. Jacob D. Wickham (IEE RAS) kindly improved the English of the manuscript. This work was supported by the Russian Science Foundation (project №. 22–14–00363).","author":[{"last_name":"Zuev","full_name":"Zuev, A. G.","first_name":"A. G."},{"last_name":"Alexandrova","first_name":"A. V.","full_name":"Alexandrova, A. V."},{"last_name":"Litvinskiy","full_name":"Litvinskiy, V. A.","first_name":"V. A."},{"full_name":"Pravdolyubova, Evgeniya","first_name":"Evgeniya","id":"0b30719b-13f0-11ed-ab2a-94498bc6a278","last_name":"Pravdolyubova"},{"first_name":"A. V.","full_name":"Tiunov, A. V.","last_name":"Tiunov"}],"date_created":"2025-05-04T22:02:32Z","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","month":"04","fulldoi":"https://doi.org/10.1007/s00572-025-01203-w","quality_controlled":"1","oa_version":"None","article_processing_charge":"No","article_number":"32","issue":"2","volume":35,"date_updated":"2025-09-30T12:24:12Z","type":"journal_article","status":"public","doi":"10.1007/s00572-025-01203-w","date_published":"2025-04-01T00:00:00Z","_id":"19641","external_id":{"pmid":["40232310"],"isi":["001467249900001"]},"abstract":[{"lang":"eng","text":"Mycorrhizal and saprotrophic macromycetes contribute strongly to the carbon and nitrogen cycles of forest ecosystems, often studied by tracing stable isotope composition of carbon and nitrogen. The phenomenon of the saprotrophic-mycorrhizal divide highlights the difference in the stable isotope composition of fruiting bodies of mycorrhizal and saprotrophic fungi. Much less is known about the isotopic composition of the mycelium, which plays an important role in the formation of the soil organic matter and fuels the fungal trophic channel in soil food webs. In this study, we assessed whether the saprotrophic-mycorrhizal divide in the natural δ13С and δ15N values can be traced throughout entire fungal organisms. This hypothesis was tested using 16 species of ectomycorrhizal and six species of saprotrophic basidiomycetous fungi. We showed that not only fruiting bodies, but also the mycelium of ectomycorrhizal and saprotrophic fungi differs in the δ13C and δ15N values. In both ectomycorrhizal and saprotrophic fungi, the δ13C and δ15N values increased from mycelium to hymenophores and correlated positively with the total N content in the corresponding tissues. The differences between ectomycorrhizal and saprotrophic mycelium can be used to reconstruct the fungal-driven belowground carbon and nitrogen allocation, and the contribution of saprotrophic and mycorrhizal fungi to soil food webs."}],"publication_identifier":{"eissn":["1432-1890"],"issn":["0940-6360"]},"title":"Saprotrophic-mycorrhizal divide in stable isotope composition throughout the whole fungus: From mycelium to hymenophore","OA_type":"closed access","year":"2025","citation":{"ama":"Zuev AG, Alexandrova AV, Litvinskiy VA, Pravdolyubova E, Tiunov AV. Saprotrophic-mycorrhizal divide in stable isotope composition throughout the whole fungus: From mycelium to hymenophore. Mycorrhiza. 2025;35(2). doi:10.1007/s00572-025-01203-w","mla":"Zuev, A. G., et al. “Saprotrophic-Mycorrhizal Divide in Stable Isotope Composition throughout the Whole Fungus: From Mycelium to Hymenophore.” Mycorrhiza, vol. 35, no. 2, 32, Springer Nature, 2025, doi:10.1007/s00572-025-01203-w.","chicago":"Zuev, A. G., A. V. Alexandrova, V. A. Litvinskiy, Evgeniya Pravdolyubova, and A. V. Tiunov. “Saprotrophic-Mycorrhizal Divide in Stable Isotope Composition throughout the Whole Fungus: From Mycelium to Hymenophore.” Mycorrhiza. Springer Nature, 2025. https://doi.org/10.1007/s00572-025-01203-w.","short":"A.G. Zuev, A.V. Alexandrova, V.A. Litvinskiy, E. Pravdolyubova, A.V. Tiunov, Mycorrhiza 35 (2025).","apa":"Zuev, A. G., Alexandrova, A. V., Litvinskiy, V. A., Pravdolyubova, E., & Tiunov, A. V. (2025). Saprotrophic-mycorrhizal divide in stable isotope composition throughout the whole fungus: From mycelium to hymenophore. Mycorrhiza. Springer Nature. https://doi.org/10.1007/s00572-025-01203-w","ieee":"A. G. Zuev, A. V. Alexandrova, V. A. Litvinskiy, E. Pravdolyubova, and A. V. Tiunov, “Saprotrophic-mycorrhizal divide in stable isotope composition throughout the whole fungus: From mycelium to hymenophore,” Mycorrhiza, vol. 35, no. 2. Springer Nature, 2025.","ista":"Zuev AG, Alexandrova AV, Litvinskiy VA, Pravdolyubova E, Tiunov AV. 2025. Saprotrophic-mycorrhizal divide in stable isotope composition throughout the whole fungus: From mycelium to hymenophore. Mycorrhiza. 35(2), 32."},"intvolume":" 35"},{"_id":"19642","doi":"10.4171/RMI/1523","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"date_published":"2025-01-23T00:00:00Z","type":"journal_article","status":"public","date_updated":"2025-09-30T12:23:41Z","volume":41,"issue":"3","OA_place":"publisher","OA_type":"gold","file_date_updated":"2025-05-05T11:38:34Z","title":"Criticality transition for positive powers of the discrete Laplacian on the half line","publication_identifier":{"eissn":["2235-0616"],"issn":["0213-2230"]},"oa":1,"abstract":[{"text":"We study the criticality and subcriticality of powers (−Δ) α with α>0 of the discrete Laplacian −Δ acting on ℓ 2 (N). We prove that these positive powers of the Laplacian are critical if and only if α≥3/2. We complement our analysis with Hardy-type inequalities for (−Δ) α in the subcritical regimes α∈(0,3/2). As an illustration of the critical case α≥3/2, we analyze asymptotic properties of discrete eigenvalues emerging by coupling (−Δ) α with a localized potential.","lang":"eng"}],"external_id":{"arxiv":["2307.09919"],"isi":["001476507600013"]},"year":"2025","file":[{"checksum":"90031b93459af54a6e63ddf2818c6f42","file_id":"19656","file_name":"2025_RevistaMat_Gerhat.pdf","date_updated":"2025-05-05T11:38:34Z","date_created":"2025-05-05T11:38:34Z","access_level":"open_access","success":1,"creator":"dernst","content_type":"application/pdf","relation":"main_file","file_size":555474}],"DOAJ_listed":"1","intvolume":" 41","citation":{"chicago":"Gerhát, Borbála M, David Krejčiřík, and František Štampach. “Criticality Transition for Positive Powers of the Discrete Laplacian on the Half Line.” Revista Matematica Iberoamericana. EMS Press, 2025. https://doi.org/10.4171/RMI/1523.","mla":"Gerhát, Borbála M., et al. “Criticality Transition for Positive Powers of the Discrete Laplacian on the Half Line.” Revista Matematica Iberoamericana, vol. 41, no. 3, EMS Press, 2025, pp. 1173–200, doi:10.4171/RMI/1523.","ama":"Gerhát BM, Krejčiřík D, Štampach F. Criticality transition for positive powers of the discrete Laplacian on the half line. Revista Matematica Iberoamericana. 2025;41(3):1173-1200. doi:10.4171/RMI/1523","ista":"Gerhát BM, Krejčiřík D, Štampach F. 2025. Criticality transition for positive powers of the discrete Laplacian on the half line. Revista Matematica Iberoamericana. 41(3), 1173–1200.","ieee":"B. M. Gerhát, D. Krejčiřík, and F. Štampach, “Criticality transition for positive powers of the discrete Laplacian on the half line,” Revista Matematica Iberoamericana, vol. 41, no. 3. EMS Press, pp. 1173–1200, 2025.","apa":"Gerhát, B. M., Krejčiřík, D., & Štampach, F. (2025). Criticality transition for positive powers of the discrete Laplacian on the half line. Revista Matematica Iberoamericana. EMS Press. https://doi.org/10.4171/RMI/1523","short":"B.M. Gerhát, D. Krejčiřík, F. Štampach, Revista Matematica Iberoamericana 41 (2025) 1173–1200."},"arxiv":1,"language":[{"iso":"eng"}],"ddc":["510"],"publication_status":"published","article_type":"original","publication":"Revista Matematica Iberoamericana","acknowledgement":"We are grateful to Petr Siegl for a helpful suggestion leading to Hardy weights with the expected optimal decay rate.\r\nThe authors acknowledge the support of the EXPRO grant no. 20-17749X of the Czech Science Foundation.\r\n","isi":1,"scopus_import":"1","department":[{"_id":"RoSe"}],"day":"23","publisher":"EMS Press","corr_author":"1","page":"1173-1200","date_created":"2025-05-04T22:02:32Z","has_accepted_license":"1","author":[{"full_name":"Gerhát, Borbála M","first_name":"Borbála M","id":"00ffceaa-f31d-11ee-93bd-f7e13e61af5e","last_name":"Gerhát"},{"first_name":"David","full_name":"Krejčiřík, David","last_name":"Krejčiřík"},{"last_name":"Štampach","first_name":"František","full_name":"Štampach, František"}],"article_processing_charge":"Yes","oa_version":"Published Version","quality_controlled":"1","fulldoi":"https://doi.org/10.4171/RMI/1523","month":"01","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345"},{"file":[{"file_size":7387217,"content_type":"application/zip","relation":"main_file","creator":"gtkacik","success":1,"date_updated":"2025-05-08T05:41:31Z","access_level":"open_access","date_created":"2025-05-08T05:41:31Z","checksum":"5c15966e4139f10281ab03575f753f82","file_id":"19659","file_name":"pre_tasep_export_data.zip"},{"checksum":"939a9341feee946a2399cab226fe69e8","file_id":"19678","file_name":"readme.txt","date_updated":"2025-05-12T07:36:23Z","date_created":"2025-05-12T07:36:23Z","access_level":"open_access","content_type":"text/plain","relation":"main_file","file_size":587,"creator":"gtkacik"}],"citation":{"ama":"Tkačik G. Token-driven totally asymmetric simple exclusion processes. 2025. doi:10.15479/AT:ISTA:19658","mla":"Tkačik, Gašper. Token-Driven Totally Asymmetric Simple Exclusion Processes. Institute of Science and Technology Austria, 2025, doi:10.15479/AT:ISTA:19658.","chicago":"Tkačik, Gašper. “Token-Driven Totally Asymmetric Simple Exclusion Processes.” Institute of Science and Technology Austria, 2025. https://doi.org/10.15479/AT:ISTA:19658.","short":"G. Tkačik, (2025).","ista":"Tkačik G. 2025. Token-driven totally asymmetric simple exclusion processes, Institute of Science and Technology Austria, 10.15479/AT:ISTA:19658.","ieee":"G. Tkačik, “Token-driven totally asymmetric simple exclusion processes.” Institute of Science and Technology Austria, 2025.","apa":"Tkačik, G. (2025). Token-driven totally asymmetric simple exclusion processes. Institute of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:19658"},"year":"2025","OA_type":"gold","OA_place":"publisher","file_date_updated":"2025-05-12T07:36:23Z","title":"Token-driven totally asymmetric simple exclusion processes","oa":1,"abstract":[{"lang":"eng","text":"We consider a family of totally asymmetric simple exclusion processes (TASEPs), consisting of particles on a lattice that require binding by a \"token\" in various physical configurations to advance over the lattice. Using a combination of theory and simulations, we address the following questions: (i) How token binding kinetics affects the current-density relation on the lattice; (ii) How this current-density relation depends on the scarcity of tokens; (iii) How tokens propagate the effects of the locally-imposed disorder (such as a slow site) over the entire lattice; (iv) How a shared pool of tokens couples concurrent TASEPs running on multiple lattices; (v) How our results translate to TASEPs with open boundaries that exchange particles with the reservoir. Since real particle motion (including in biological systems that inspired the standard TASEP model, e.g., protein synthesis or movement of molecular motors) is often catalyzed, regulated, actuated, or otherwise mediated, the token-driven TASEP dynamics analyzed in this paper should allow for a better understanding of real systems and enable a closer match between TASEP theory and experimental observations."}],"_id":"19658","date_published":"2025-05-08T00:00:00Z","tmp":{"short":"CC BY-SA (4.0)","name":"Creative Commons Attribution-ShareAlike 4.0 International Public License (CC BY-SA 4.0)","image":"/images/cc_by_sa.png","legal_code_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode"},"doi":"10.15479/AT:ISTA:19658","related_material":{"record":[{"id":"19785","status":"public","relation":"used_in_publication"}]},"status":"public","type":"research_data","date_updated":"2025-09-30T12:44:54Z","article_processing_charge":"No","oa_version":"Published Version","fulldoi":"https://doi.org/10.15479/AT:ISTA:19658","month":"05","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","corr_author":"1","date_created":"2025-05-08T05:43:38Z","license":"https://creativecommons.org/licenses/by-sa/4.0/","contributor":[{"contributor_type":"researcher","first_name":"Bor","last_name":"Kavcic","orcid":"0000-0001-6041-254X","id":"350F91D2-F248-11E8-B48F-1D18A9856A87"}],"has_accepted_license":"1","author":[{"full_name":"Tkačik, Gašper","first_name":"Gašper","id":"3D494DCA-F248-11E8-B48F-1D18A9856A87","last_name":"Tkačik","orcid":"0000-0002-6699-1455"}],"department":[{"_id":"GaTk"}],"day":"08","publisher":"Institute of Science and Technology Austria","ddc":["570"]},{"year":"2025","file":[{"creator":"dernst","file_size":886318,"content_type":"application/pdf","relation":"main_file","date_updated":"2025-05-12T07:27:28Z","date_created":"2025-05-12T07:27:28Z","access_level":"open_access","checksum":"3606ebd34d59d03f8c66a3a1794c3e4f","file_id":"19676","file_name":"2025_ArchiveRatioMechanics_Mitrouskas.pdf","success":1}],"intvolume":" 249","citation":{"mla":"Mitrouskas, David Johannes. “The Weakly Coupled Two-Dimensional Fermi Polaron.” Archive for Rational Mechanics and Analysis, vol. 249, no. 3, 30, Springer Nature, 2025, doi:10.1007/s00205-025-02098-9.","ama":"Mitrouskas DJ. The weakly coupled two-dimensional Fermi polaron. Archive for Rational Mechanics and Analysis. 2025;249(3). doi:10.1007/s00205-025-02098-9","chicago":"Mitrouskas, David Johannes. “The Weakly Coupled Two-Dimensional Fermi Polaron.” Archive for Rational Mechanics and Analysis. Springer Nature, 2025. https://doi.org/10.1007/s00205-025-02098-9.","short":"D.J. Mitrouskas, Archive for Rational Mechanics and Analysis 249 (2025).","apa":"Mitrouskas, D. J. (2025). The weakly coupled two-dimensional Fermi polaron. Archive for Rational Mechanics and Analysis. Springer Nature. https://doi.org/10.1007/s00205-025-02098-9","ieee":"D. J. Mitrouskas, “The weakly coupled two-dimensional Fermi polaron,” Archive for Rational Mechanics and Analysis, vol. 249, no. 3. Springer Nature, 2025.","ista":"Mitrouskas DJ. 2025. The weakly coupled two-dimensional Fermi polaron. Archive for Rational Mechanics and Analysis. 249(3), 30."},"date_published":"2025-06-01T00:00:00Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"doi":"10.1007/s00205-025-02098-9","_id":"19660","date_updated":"2025-09-30T12:25:19Z","type":"journal_article","status":"public","volume":249,"article_number":"30","issue":"3","OA_type":"hybrid","OA_place":"publisher","oa":1,"publication_identifier":{"eissn":["1432-0673"],"issn":["0003-9527"]},"file_date_updated":"2025-05-12T07:27:28Z","title":"The weakly coupled two-dimensional Fermi polaron","external_id":{"isi":["001482770500001"]},"abstract":[{"text":"We analyze the ground state energy of N fermions in a two-dimensional box interacting with an impurity particle via two-body point interactions. We show that for weak coupling, the ground state energy is asymptotically described by the polaron energy, as proposed by F. Chevy in the physics literature. The polaron energy is the solution of a nonlinear equation involving the Green’s function of the free Fermi gas and the binding energy of the two-body point interaction. We provide quantitative error estimates that are uniform in the thermodynamic limit.","lang":"eng"}],"corr_author":"1","date_created":"2025-05-11T22:02:37Z","author":[{"id":"cbddacee-2b11-11eb-a02e-a2e14d04e52d","last_name":"Mitrouskas","first_name":"David Johannes","full_name":"Mitrouskas, David Johannes"}],"has_accepted_license":"1","oa_version":"Published Version","article_processing_charge":"Yes (via OA deal)","fulldoi":"https://doi.org/10.1007/s00205-025-02098-9","quality_controlled":"1","month":"06","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","article_type":"original","publication_status":"published","ddc":["530"],"language":[{"iso":"eng"}],"publication":"Archive for Rational Mechanics and Analysis","isi":1,"acknowledgement":"The author would like to thank Ulrich Linden for introducing him to the Fermi polaron and for his valuable contributions in the early stages of this project. Additionally, the author is grateful to Krzysztof Myśliwy for helpful comments. Open access funding provided by Institute of Science and Technology (IST Austria).","scopus_import":"1","department":[{"_id":"RoSe"}],"day":"01","publisher":"Springer Nature"},{"year":"2025","intvolume":" 58","file":[{"file_size":551190,"relation":"main_file","content_type":"application/pdf","creator":"dernst","success":1,"date_created":"2025-05-12T07:13:07Z","access_level":"open_access","date_updated":"2025-05-12T07:13:07Z","file_name":"2025_JourPhysicsA_Cardenas.pdf","file_id":"19675","checksum":"a181e1c2d8df08eb683a355e81c5e85a"}],"arxiv":1,"citation":{"mla":"Cárdenas, Esteban, and David Johannes Mitrouskas. “The Renormalized Nelson Model in the Weak Coupling Limit.” Journal of Physics A: Mathematical and Theoretical, vol. 58, no. 17, 175201, IOP Publishing, 2025, doi:10.1088/1751-8121/adcdd9.","ama":"Cárdenas E, Mitrouskas DJ. The renormalized Nelson model in the weak coupling limit. Journal of Physics A: Mathematical and Theoretical. 2025;58(17). doi:10.1088/1751-8121/adcdd9","chicago":"Cárdenas, Esteban, and David Johannes Mitrouskas. “The Renormalized Nelson Model in the Weak Coupling Limit.” Journal of Physics A: Mathematical and Theoretical. IOP Publishing, 2025. https://doi.org/10.1088/1751-8121/adcdd9.","short":"E. Cárdenas, D.J. Mitrouskas, Journal of Physics A: Mathematical and Theoretical 58 (2025).","apa":"Cárdenas, E., & Mitrouskas, D. J. (2025). The renormalized Nelson model in the weak coupling limit. Journal of Physics A: Mathematical and Theoretical. IOP Publishing. https://doi.org/10.1088/1751-8121/adcdd9","ista":"Cárdenas E, Mitrouskas DJ. 2025. The renormalized Nelson model in the weak coupling limit. Journal of Physics A: Mathematical and Theoretical. 58(17), 175201.","ieee":"E. Cárdenas and D. J. Mitrouskas, “The renormalized Nelson model in the weak coupling limit,” Journal of Physics A: Mathematical and Theoretical, vol. 58, no. 17. IOP Publishing, 2025."},"date_updated":"2025-09-30T12:24:45Z","status":"public","type":"journal_article","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"date_published":"2025-04-28T00:00:00Z","doi":"10.1088/1751-8121/adcdd9","_id":"19661","issue":"17","article_number":"175201","volume":58,"oa":1,"publication_identifier":{"issn":["1751-8113"],"eissn":["1751-8121"]},"title":"The renormalized Nelson model in the weak coupling limit","file_date_updated":"2025-05-12T07:13:07Z","OA_type":"hybrid","OA_place":"publisher","external_id":{"isi":["001474094200001"],"arxiv":["2412.01670"]},"abstract":[{"text":"The Nelson model describes non-relativistic particles coupled to a relativistic Bose scalar field. In this article, we study the renormalized version of the Nelson model with massless bosons in Davies' weak coupling limit. Our main result states that the two-body Coulomb potential emerges as an effective pair interaction between the particles, which arises from the exchange of virtual excitations of the quantum field.","lang":"eng"}],"date_created":"2025-05-11T22:02:37Z","corr_author":"1","author":[{"last_name":"Cárdenas","first_name":"Esteban","full_name":"Cárdenas, Esteban"},{"full_name":"Mitrouskas, David Johannes","first_name":"David Johannes","id":"cbddacee-2b11-11eb-a02e-a2e14d04e52d","last_name":"Mitrouskas"}],"has_accepted_license":"1","fulldoi":"https://doi.org/10.1088/1751-8121/adcdd9","month":"04","quality_controlled":"1","oa_version":"Published Version","article_processing_charge":"Yes (in subscription journal)","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","article_type":"original","publication_status":"published","language":[{"iso":"eng"}],"ddc":["530"],"publication":"Journal of Physics A: Mathematical and Theoretical","scopus_import":"1","isi":1,"acknowledgement":"D M thanks Nataˇsa Pavlovi´c for the invitation to the University of Texas at Austin and for the\r\nhospitality offered by the department, where part of this work was performed. E C gratefully\r\nacknowledges support from NSF under Grant Nos DMS-2009549 and DMS-2052789 through\r\nNataˇsa Pavlovi´","department":[{"_id":"RoSe"}],"day":"28","publisher":"IOP Publishing"},{"year":"2025","citation":{"short":"A.M. Gnanaraj, J. Bao, H. Schmidt, Weather and Climate Dynamics 6 (2025) 489–503.","ista":"Gnanaraj AM, Bao J, Schmidt H. 2025. The impact of the rotation rate on an aquaplanet’s radiant energy budget: Insights from experiments varying the Coriolis parameter. Weather and Climate Dynamics. 6(2), 489–503.","ieee":"A. M. Gnanaraj, J. Bao, and H. Schmidt, “The impact of the rotation rate on an aquaplanet’s radiant energy budget: Insights from experiments varying the Coriolis parameter,” Weather and Climate Dynamics, vol. 6, no. 2. Copernicus Publications, pp. 489–503, 2025.","apa":"Gnanaraj, A. M., Bao, J., & Schmidt, H. (2025). The impact of the rotation rate on an aquaplanet’s radiant energy budget: Insights from experiments varying the Coriolis parameter. Weather and Climate Dynamics. Copernicus Publications. https://doi.org/10.5194/wcd-6-489-2025","mla":"Gnanaraj, Abisha Mary, et al. “The Impact of the Rotation Rate on an Aquaplanet’s Radiant Energy Budget: Insights from Experiments Varying the Coriolis Parameter.” Weather and Climate Dynamics, vol. 6, no. 2, Copernicus Publications, 2025, pp. 489–503, doi:10.5194/wcd-6-489-2025.","ama":"Gnanaraj AM, Bao J, Schmidt H. The impact of the rotation rate on an aquaplanet’s radiant energy budget: Insights from experiments varying the Coriolis parameter. Weather and Climate Dynamics. 2025;6(2):489-503. doi:10.5194/wcd-6-489-2025","chicago":"Gnanaraj, Abisha Mary, Jiawei Bao, and Hauke Schmidt. “The Impact of the Rotation Rate on an Aquaplanet’s Radiant Energy Budget: Insights from Experiments Varying the Coriolis Parameter.” Weather and Climate Dynamics. Copernicus Publications, 2025. https://doi.org/10.5194/wcd-6-489-2025."},"PlanS_conform":"1","intvolume":" 6","ec_funded":1,"file":[{"file_id":"19680","file_name":"2025_WeatherClimateDynam_Gnanaraj.pdf","checksum":"2ea68f7e51ee39ccb6886719a83a78ca","date_created":"2025-05-12T08:23:10Z","access_level":"open_access","date_updated":"2025-05-12T08:23:10Z","success":1,"creator":"dernst","relation":"main_file","content_type":"application/pdf","file_size":6500575}],"DOAJ_listed":"1","issue":"2","volume":6,"status":"public","type":"journal_article","date_updated":"2025-07-09T08:40:18Z","_id":"19662","date_published":"2025-04-25T00:00:00Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"doi":"10.5194/wcd-6-489-2025","abstract":[{"text":"We investigate the effect of changes in the Coriolis force caused by changes in the rotation rate on the top-of-atmosphere (TOA) radiant energy budget of an aquaplanet general circulation model with prescribed sea surface temperatures. We analyse the effective radiative forcing caused by changes from Earth-like rotation to values between 1/32 and 8 times the Earth's rotation rate. The forcing differs by about 60 W m−2 between the fastest and slowest rotation cases, with a monotonically increasing positive forcing for faster-than-Earth-like rotations and a non-monotonically increasing negative forcing for slower rotations. The largest contributions to the forcing are due to changes in, in this order, the shortwave cloud radiative effect (SWCRE) and the clear-sky outgoing longwave radiation (OLR). From the fastest to the slowest rotation, the Hadley cell expands and the troposphere becomes drier, increasing the OLR. This contributes to negative forcing at slower-than-Earth-like rotations and to positive forcing at faster-than-Earth-like rotations. The SWCRE is influenced by changes in the low-level cloudiness within the Hadley cell and the baroclinic regime. With the expansion of the Hadley cell, the area of enhanced tropospheric stability increases, resulting in more low-level clouds, a higher SWCRE, and increased negative forcing. The non-monotonicity results from an intermediate decrease in the SWCRE caused by the disappearance of baroclinic eddies as the Hadley cell reaches global extension. At rotations faster than Earth-like, the decrease in the SWCRE, mainly due to the weakening of baroclinic eddies and storm systems, leads to an increase in positive forcing. In summary, changes in the SWCRE, driven by different circulation responses at slower-than-Earth-like and faster-than-Earth-like rotations, strongly influence the TOA radiant energy budget. These effects, along with a substantial contribution from the clear-sky OLR, could impact the habitability of Earth-like rotating planets.","lang":"eng"}],"file_date_updated":"2025-05-12T08:23:10Z","publication_identifier":{"eissn":["2698-4016"]},"title":"The impact of the rotation rate on an aquaplanet's radiant energy budget: Insights from experiments varying the Coriolis parameter","oa":1,"OA_type":"gold","OA_place":"publisher","has_accepted_license":"1","author":[{"first_name":"Abisha Mary","full_name":"Gnanaraj, Abisha Mary","last_name":"Gnanaraj"},{"full_name":"Bao, Jiawei","first_name":"Jiawei","id":"bb9a7399-fefd-11ed-be3c-ae648fd1d160","last_name":"Bao"},{"first_name":"Hauke","full_name":"Schmidt, Hauke","last_name":"Schmidt"}],"date_created":"2025-05-11T22:02:38Z","page":"489-503","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","fulldoi":"https://doi.org/10.5194/wcd-6-489-2025","month":"04","quality_controlled":"1","article_processing_charge":"Yes (via OA deal)","oa_version":"Published Version","publication":"Weather and Climate Dynamics","language":[{"iso":"eng"}],"ddc":["550"],"publication_status":"published","article_type":"original","publisher":"Copernicus Publications","department":[{"_id":"CaMu"}],"day":"25","scopus_import":"1","acknowledgement":"We thank Bjorn Stevens for suggesting the study and for substantial ideas along the way. We also thank Sebastian Rast for helping with the model compilation. This work used resources of the German Climate Computing Center (DKRZ) under project ID mh0066 for our experiments and analysis. Jiawei Bao acknowledges the European Union's Horizon 2020 for funding.Jiawei Bao has been supported by the European Union's Horizon 2020 research and innovation programme under a Marie Skłodowska-Curie grant (grant agreement no. 101034413).\r\nThe article processing charges for this open-access publication were covered by the Max Planck Society.","project":[{"name":"IST-BRIDGE: International postdoctoral program","_id":"fc2ed2f7-9c52-11eb-aca3-c01059dda49c","call_identifier":"H2020","grant_number":"101034413"}]}]