[{"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_updated":"2023-05-08T11:00:59Z","page":"215-225","citation":{"ista":"Feng X, Zilberman D, Dickinson H. 2013. A conversation across generations: Soma-germ cell crosstalk in plants. Developmental Cell. 24(3), 215–225.","short":"X. Feng, D. Zilberman, H. Dickinson, Developmental Cell 24 (2013) 215–225.","ieee":"X. Feng, D. Zilberman, and H. Dickinson, “A conversation across generations: Soma-germ cell crosstalk in plants,” <i>Developmental Cell</i>, vol. 24, no. 3. Elsevier, pp. 215–225, 2013.","mla":"Feng, Xiaoqi, et al. “A Conversation across Generations: Soma-Germ Cell Crosstalk in Plants.” <i>Developmental Cell</i>, vol. 24, no. 3, Elsevier, 2013, pp. 215–25, doi:<a href=\"https://doi.org/10.1016/j.devcel.2013.01.014\">10.1016/j.devcel.2013.01.014</a>.","ama":"Feng X, Zilberman D, Dickinson H. A conversation across generations: Soma-germ cell crosstalk in plants. <i>Developmental Cell</i>. 2013;24(3):215-225. doi:<a href=\"https://doi.org/10.1016/j.devcel.2013.01.014\">10.1016/j.devcel.2013.01.014</a>","apa":"Feng, X., Zilberman, D., &#38; Dickinson, H. (2013). A conversation across generations: Soma-germ cell crosstalk in plants. <i>Developmental Cell</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.devcel.2013.01.014\">https://doi.org/10.1016/j.devcel.2013.01.014</a>","chicago":"Feng, Xiaoqi, Daniel Zilberman, and Hugh Dickinson. “A Conversation across Generations: Soma-Germ Cell Crosstalk in Plants.” <i>Developmental Cell</i>. Elsevier, 2013. <a href=\"https://doi.org/10.1016/j.devcel.2013.01.014\">https://doi.org/10.1016/j.devcel.2013.01.014</a>."},"article_type":"review","type":"journal_article","oa_version":"Published Version","extern":"1","abstract":[{"text":"Plants undergo alternation of generation in which reproductive cells develop in the plant body (\"sporophytic generation\") and then differentiate into a multicellular gamete-forming \"gametophytic generation.\" Different populations of helper cells assist in this transgenerational journey, with somatic tissues supporting early development and single nurse cells supporting gametogenesis. New data reveal a two-way relationship between early reproductive cells and their helpers involving complex epigenetic and signaling networks determining cell number and fate. Later, the egg cell plays a central role in specifying accessory cells, whereas in both gametophytes, companion cells contribute non-cell-autonomously to the epigenetic landscape of the gamete genomes.","lang":"eng"}],"_id":"9520","title":"A conversation across generations: Soma-germ cell crosstalk in plants","status":"public","author":[{"id":"e0164712-22ee-11ed-b12a-d80fcdf35958","first_name":"Xiaoqi","last_name":"Feng","full_name":"Feng, Xiaoqi","orcid":"0000-0002-4008-1234"},{"orcid":"0000-0002-0123-8649","full_name":"Zilberman, Daniel","last_name":"Zilberman","first_name":"Daniel","id":"6973db13-dd5f-11ea-814e-b3e5455e9ed1"},{"last_name":"Dickinson","first_name":"Hugh","full_name":"Dickinson, Hugh"}],"date_created":"2021-06-08T06:14:50Z","language":[{"iso":"eng"}],"publication_identifier":{"issn":["1534-5807"],"eissn":["1878-1551"]},"publication":"Developmental Cell","issue":"3","scopus_import":"1","fulldoi":"https://doi.org/10.1016/j.devcel.2013.01.014","main_file_link":[{"url":"https://doi.org/10.1016/j.devcel.2013.01.014","open_access":"1"}],"date_published":"2013-02-11T00:00:00Z","article_processing_charge":"No","quality_controlled":"1","pmid":1,"year":"2013","publication_status":"published","intvolume":"        24","volume":24,"doi":"10.1016/j.devcel.2013.01.014","external_id":{"pmid":["23410937"]},"month":"02","department":[{"_id":"DaZi"},{"_id":"XiFe"}],"publisher":"Elsevier","day":"11","oa":1},{"language":[{"iso":"eng"}],"publication":"The Journal of Chemical Physics","issue":"16","scopus_import":"1","publication_identifier":{"issn":["0021-9606"],"eissn":["1089-7690"]},"citation":{"mla":"Cheng, Bingqing, and Alfonso H. W. Ngan. “Thermally Induced Solid-Solid Structural Transition of Copper Nanoparticles through Direct Geometrical Conversion.” <i>The Journal of Chemical Physics</i>, vol. 138, no. 16, 164314, AIP Publishing, 2013, doi:<a href=\"https://doi.org/10.1063/1.4802025\">10.1063/1.4802025</a>.","ama":"Cheng B, Ngan AHW. Thermally induced solid-solid structural transition of copper nanoparticles through direct geometrical conversion. <i>The Journal of Chemical Physics</i>. 2013;138(16). doi:<a href=\"https://doi.org/10.1063/1.4802025\">10.1063/1.4802025</a>","ieee":"B. Cheng and A. H. W. Ngan, “Thermally induced solid-solid structural transition of copper nanoparticles through direct geometrical conversion,” <i>The Journal of Chemical Physics</i>, vol. 138, no. 16. AIP Publishing, 2013.","ista":"Cheng B, Ngan AHW. 2013. Thermally induced solid-solid structural transition of copper nanoparticles through direct geometrical conversion. The Journal of Chemical Physics. 138(16), 164314.","short":"B. Cheng, A.H.W. Ngan, The Journal of Chemical Physics 138 (2013).","chicago":"Cheng, Bingqing, and Alfonso H. W. Ngan. “Thermally Induced Solid-Solid Structural Transition of Copper Nanoparticles through Direct Geometrical Conversion.” <i>The Journal of Chemical Physics</i>. AIP Publishing, 2013. <a href=\"https://doi.org/10.1063/1.4802025\">https://doi.org/10.1063/1.4802025</a>.","apa":"Cheng, B., &#38; Ngan, A. H. W. (2013). Thermally induced solid-solid structural transition of copper nanoparticles through direct geometrical conversion. <i>The Journal of Chemical Physics</i>. AIP Publishing. <a href=\"https://doi.org/10.1063/1.4802025\">https://doi.org/10.1063/1.4802025</a>"},"user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","date_updated":"2021-08-09T12:35:34Z","_id":"9663","title":"Thermally induced solid-solid structural transition of copper nanoparticles through direct geometrical conversion","author":[{"id":"cbe3cda4-d82c-11eb-8dc7-8ff94289fcc9","last_name":"Cheng","first_name":"Bingqing","full_name":"Cheng, Bingqing","orcid":"0000-0002-3584-9632"},{"full_name":"Ngan, Alfonso H. W.","first_name":"Alfonso H. W.","last_name":"Ngan"}],"date_created":"2021-07-15T09:27:58Z","status":"public","article_type":"original","type":"journal_article","oa_version":"Submitted Version","abstract":[{"text":"Molecular dynamics simulations of small Cu nanoparticles using three different interatomic potentials at rising temperature indicate that small nanoparticles can undergo solid-solid structural transitions through a direct geometrical conversion route. The direct geometrical conversion can happen for cuboctahedral nanoparticles, which turn into an icosahedra shape: one diagonal of the square faces contracts, and the faces are folded along the diagonal to give rise to two equilateral triangles. The transition is a kinetic process that cannot be fully explained through an energetic point of view. It has low activation energy and fast reaction time in the simulations. The transition mechanism is via the transmission of shear waves initiated from the particle surface and does not involve dislocation activity.","lang":"eng"}],"extern":"1","article_number":"164314","volume":138,"doi":"10.1063/1.4802025","day":"28","oa":1,"external_id":{"pmid":["23635145"]},"month":"04","publisher":"AIP Publishing","date_published":"2013-04-28T00:00:00Z","article_processing_charge":"No","fulldoi":"https://doi.org/10.1063/1.4802025","main_file_link":[{"open_access":"1","url":"https://pubmed.ncbi.nlm.nih.gov/23635145/"}],"quality_controlled":"1","pmid":1,"year":"2013","publication_status":"published","intvolume":"       138"},{"date_published":"2013-08-01T00:00:00Z","article_processing_charge":"No","citation":{"mla":"Cheng, Bingqing, and Alfonso H. W. Ngan. “The Crystal Structures of Sintered Copper Nanoparticles: A Molecular Dynamics Study.” <i>International Journal of Plasticity</i>, vol. 47, Elsevier, 2013, pp. 65–79, doi:<a href=\"https://doi.org/10.1016/j.ijplas.2013.01.006\">10.1016/j.ijplas.2013.01.006</a>.","ama":"Cheng B, Ngan AHW. The crystal structures of sintered copper nanoparticles: A molecular dynamics study. <i>International Journal of Plasticity</i>. 2013;47:65-79. doi:<a href=\"https://doi.org/10.1016/j.ijplas.2013.01.006\">10.1016/j.ijplas.2013.01.006</a>","ieee":"B. Cheng and A. H. W. Ngan, “The crystal structures of sintered copper nanoparticles: A molecular dynamics study,” <i>International Journal of Plasticity</i>, vol. 47. Elsevier, pp. 65–79, 2013.","short":"B. Cheng, A.H.W. Ngan, International Journal of Plasticity 47 (2013) 65–79.","ista":"Cheng B, Ngan AHW. 2013. The crystal structures of sintered copper nanoparticles: A molecular dynamics study. International Journal of Plasticity. 47, 65–79.","chicago":"Cheng, Bingqing, and Alfonso H.W. Ngan. “The Crystal Structures of Sintered Copper Nanoparticles: A Molecular Dynamics Study.” <i>International Journal of Plasticity</i>. Elsevier, 2013. <a href=\"https://doi.org/10.1016/j.ijplas.2013.01.006\">https://doi.org/10.1016/j.ijplas.2013.01.006</a>.","apa":"Cheng, B., &#38; Ngan, A. H. W. (2013). The crystal structures of sintered copper nanoparticles: A molecular dynamics study. <i>International Journal of Plasticity</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.ijplas.2013.01.006\">https://doi.org/10.1016/j.ijplas.2013.01.006</a>"},"page":"65-79","fulldoi":"https://doi.org/10.1016/j.ijplas.2013.01.006","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","date_updated":"2023-02-23T14:04:30Z","_id":"9674","title":"The crystal structures of sintered copper nanoparticles: A molecular dynamics study","status":"public","date_created":"2021-07-15T14:27:44Z","author":[{"last_name":"Cheng","first_name":"Bingqing","id":"cbe3cda4-d82c-11eb-8dc7-8ff94289fcc9","orcid":"0000-0002-3584-9632","full_name":"Cheng, Bingqing"},{"last_name":"Ngan","first_name":"Alfonso H.W.","full_name":"Ngan, Alfonso H.W."}],"quality_controlled":"1","year":"2013","article_type":"original","oa_version":"None","publication_status":"published","type":"journal_article","intvolume":"        47","extern":"1","abstract":[{"lang":"eng","text":"The coalescence of nano-crystals during sintering is often found to result in interesting crystalline structures such as multi-fold twins, and yet the plasticity mechanism accompanying their formation is unclear. In this work, the sintering behavior of two unsupported copper nanoparticles initially at room temperature is investigated by molecular dynamics simulations under the constant-energy ensemble. The results reveal that once the two nanoparticles are brought into contact, they often go through drastic structural changes with the inter-particle grain boundary quickly eliminated, and single- and multi-fold twinning occurs frequently in the coalesced product. Whereas the formation of single twins is found to be via the more usual mechanism of emission of Shockley partials on {1 1 1} planes, the formation of fivefold twins, however, takes place via a novel dislocation-free mechanism involving a series of shear and rigid-body rotation processes caused by elastic waves with amplitudes not corresponding to any allowable Burgers vector in the fcc lattice. Such a lattice-wave, dislocation-free twinning mechanism has never been reported before."}],"language":[{"iso":"eng"}],"volume":47,"doi":"10.1016/j.ijplas.2013.01.006","publication":"International Journal of Plasticity","day":"01","scopus_import":"1","publication_identifier":{"issn":["0749-6419"]},"month":"08","publisher":"Elsevier"},{"publication_identifier":{"issn":["0927-0256"]},"month":"06","publisher":"Elsevier","scopus_import":"1","publication":"Computational Materials Science","day":"01","doi":"10.1016/j.commatsci.2013.03.014","language":[{"iso":"eng"}],"volume":74,"extern":"1","abstract":[{"text":"Despite its relevance to a range of technological applications including nanocrystalline material fabrication, the sintering mechanisms of nanoparticles have not been well understood. It has been recognized that extrapolation from understanding of macro-particle sintering is unreliable for the nano-particle size regime. In this work, the sintering behaviour of copper nanoparticles under periodic boundary conditions at different temperatures and pressures was investigated by Molecular Dynamics simulations. It was found that smaller particle sizes, higher temperature and higher external pressure facilitate densification. Through a comparison with a two-sphere model, the governing mechanisms for many nanoparticles sintered at low temperature (T⩽900K) were identified to be a variety of plasticity processes including dislocation, twinning and even amorphization at the contact neck regions, due to the presence of high stresses.","lang":"eng"}],"intvolume":"        74","article_type":"original","quality_controlled":"1","year":"2013","publication_status":"published","type":"journal_article","oa_version":"None","author":[{"id":"cbe3cda4-d82c-11eb-8dc7-8ff94289fcc9","last_name":"Cheng","first_name":"Bingqing","orcid":"0000-0002-3584-9632","full_name":"Cheng, Bingqing"},{"full_name":"Ngan, Alfonso H.W.","first_name":"Alfonso H.W.","last_name":"Ngan"}],"status":"public","date_created":"2021-07-16T06:46:38Z","_id":"9676","title":"The sintering and densification behaviour of many copper nanoparticles: A molecular dynamics study","fulldoi":"https://doi.org/10.1016/j.commatsci.2013.03.014","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","date_updated":"2023-02-23T14:04:35Z","citation":{"apa":"Cheng, B., &#38; Ngan, A. H. W. (2013). The sintering and densification behaviour of many copper nanoparticles: A molecular dynamics study. <i>Computational Materials Science</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.commatsci.2013.03.014\">https://doi.org/10.1016/j.commatsci.2013.03.014</a>","chicago":"Cheng, Bingqing, and Alfonso H.W. Ngan. “The Sintering and Densification Behaviour of Many Copper Nanoparticles: A Molecular Dynamics Study.” <i>Computational Materials Science</i>. Elsevier, 2013. <a href=\"https://doi.org/10.1016/j.commatsci.2013.03.014\">https://doi.org/10.1016/j.commatsci.2013.03.014</a>.","ieee":"B. Cheng and A. H. W. Ngan, “The sintering and densification behaviour of many copper nanoparticles: A molecular dynamics study,” <i>Computational Materials Science</i>, vol. 74. Elsevier, pp. 1–11, 2013.","short":"B. Cheng, A.H.W. Ngan, Computational Materials Science 74 (2013) 1–11.","ista":"Cheng B, Ngan AHW. 2013. The sintering and densification behaviour of many copper nanoparticles: A molecular dynamics study. Computational Materials Science. 74, 1–11.","ama":"Cheng B, Ngan AHW. The sintering and densification behaviour of many copper nanoparticles: A molecular dynamics study. <i>Computational Materials Science</i>. 2013;74:1-11. doi:<a href=\"https://doi.org/10.1016/j.commatsci.2013.03.014\">10.1016/j.commatsci.2013.03.014</a>","mla":"Cheng, Bingqing, and Alfonso H. W. Ngan. “The Sintering and Densification Behaviour of Many Copper Nanoparticles: A Molecular Dynamics Study.” <i>Computational Materials Science</i>, vol. 74, Elsevier, 2013, pp. 1–11, doi:<a href=\"https://doi.org/10.1016/j.commatsci.2013.03.014\">10.1016/j.commatsci.2013.03.014</a>."},"page":"1-11","article_processing_charge":"No","date_published":"2013-06-01T00:00:00Z"},{"doi":"10.1016/j.msea.2013.07.065","language":[{"iso":"eng"}],"volume":585,"month":"11","publication_identifier":{"issn":["0921-5093"]},"publisher":"Elsevier","scopus_import":"1","publication":"Materials Science and Engineering: A","day":"15","fulldoi":"https://doi.org/10.1016/j.msea.2013.07.065","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","date_updated":"2023-02-23T14:04:51Z","article_processing_charge":"No","citation":{"ama":"Cheng B, Ngan AHW. Crystal plasticity of Cu nanocrystals during collision. <i>Materials Science and Engineering: A</i>. 2013;585:326-334. doi:<a href=\"https://doi.org/10.1016/j.msea.2013.07.065\">10.1016/j.msea.2013.07.065</a>","mla":"Cheng, Bingqing, and Alfonso H. W. Ngan. “Crystal Plasticity of Cu Nanocrystals during Collision.” <i>Materials Science and Engineering: A</i>, vol. 585, Elsevier, 2013, pp. 326–34, doi:<a href=\"https://doi.org/10.1016/j.msea.2013.07.065\">10.1016/j.msea.2013.07.065</a>.","ieee":"B. Cheng and A. H. W. Ngan, “Crystal plasticity of Cu nanocrystals during collision,” <i>Materials Science and Engineering: A</i>, vol. 585. Elsevier, pp. 326–334, 2013.","ista":"Cheng B, Ngan AHW. 2013. Crystal plasticity of Cu nanocrystals during collision. Materials Science and Engineering: A. 585, 326–334.","short":"B. Cheng, A.H.W. Ngan, Materials Science and Engineering: A 585 (2013) 326–334.","chicago":"Cheng, Bingqing, and Alfonso H.W. Ngan. “Crystal Plasticity of Cu Nanocrystals during Collision.” <i>Materials Science and Engineering: A</i>. Elsevier, 2013. <a href=\"https://doi.org/10.1016/j.msea.2013.07.065\">https://doi.org/10.1016/j.msea.2013.07.065</a>.","apa":"Cheng, B., &#38; Ngan, A. H. W. (2013). Crystal plasticity of Cu nanocrystals during collision. <i>Materials Science and Engineering: A</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.msea.2013.07.065\">https://doi.org/10.1016/j.msea.2013.07.065</a>"},"page":"326-334","date_published":"2013-11-15T00:00:00Z","intvolume":"       585","abstract":[{"text":"In this work, we simulate the response of two Cu nanoparticles colliding at different approaching rates at room temperature by MD. For small nanospheres, the formation of single twins is favored at high approach rates, whereas larger nanospheres mainly deform by dislocation slip. For small nanocubes with large {100} flat surfaces, however, a dislocation-free direct geometrical conversion process that leads to five-fold twinning dominates except at highly retarded approaching rates. For larger nanocubes, single twin formation is the governing plasticity mechanism. The probability for plastic deformation by dislocation slip or twinning is attributed to the abundance of surface steps, which act as sites for dislocation nucleation.","lang":"eng"}],"extern":"1","article_type":"original","quality_controlled":"1","year":"2013","type":"journal_article","publication_status":"published","oa_version":"None","author":[{"full_name":"Cheng, Bingqing","orcid":"0000-0002-3584-9632","last_name":"Cheng","first_name":"Bingqing","id":"cbe3cda4-d82c-11eb-8dc7-8ff94289fcc9"},{"full_name":"Ngan, Alfonso H.W.","first_name":"Alfonso H.W.","last_name":"Ngan"}],"status":"public","date_created":"2021-07-19T09:04:36Z","_id":"9682","title":"Crystal plasticity of Cu nanocrystals during collision"},{"citation":{"ama":"Serbyn M, Abanin D. New Dirac points and multiple Landau level crossings in biased trilayer graphene. <i>Physical Review B - Condensed Matter and Materials Physics</i>. 2013;87(11). doi:<a href=\"https://doi.org/10.1103/PhysRevB.87.115422\">10.1103/PhysRevB.87.115422</a>","mla":"Serbyn, Maksym, and Dmitry Abanin. “New Dirac Points and Multiple Landau Level Crossings in Biased Trilayer Graphene.” <i>Physical Review B - Condensed Matter and Materials Physics</i>, vol. 87, no. 11, American Physical Society, 2013, doi:<a href=\"https://doi.org/10.1103/PhysRevB.87.115422\">10.1103/PhysRevB.87.115422</a>.","ieee":"M. Serbyn and D. Abanin, “New Dirac points and multiple Landau level crossings in biased trilayer graphene,” <i>Physical Review B - Condensed Matter and Materials Physics</i>, vol. 87, no. 11. American Physical Society, 2013.","short":"M. Serbyn, D. Abanin, Physical Review B - Condensed Matter and Materials Physics 87 (2013).","ista":"Serbyn M, Abanin D. 2013. New Dirac points and multiple Landau level crossings in biased trilayer graphene. Physical Review B - Condensed Matter and Materials Physics. 87(11).","chicago":"Serbyn, Maksym, and Dmitry Abanin. “New Dirac Points and Multiple Landau Level Crossings in Biased Trilayer Graphene.” <i>Physical Review B - Condensed Matter and Materials Physics</i>. American Physical Society, 2013. <a href=\"https://doi.org/10.1103/PhysRevB.87.115422\">https://doi.org/10.1103/PhysRevB.87.115422</a>.","apa":"Serbyn, M., &#38; Abanin, D. (2013). New Dirac points and multiple Landau level crossings in biased trilayer graphene. <i>Physical Review B - Condensed Matter and Materials Physics</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevB.87.115422\">https://doi.org/10.1103/PhysRevB.87.115422</a>"},"date_published":"2013-03-18T00:00:00Z","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1212.6251"}],"date_updated":"2021-01-12T08:22:20Z","fulldoi":"https://doi.org/10.1103/PhysRevB.87.115422","date_created":"2018-12-11T11:49:28Z","author":[{"full_name":"Maksym Serbyn","orcid":"0000-0002-2399-5827","id":"47809E7E-F248-11E8-B48F-1D18A9856A87","first_name":"Maksym","last_name":"Serbyn"},{"first_name":"Dmitry","last_name":"Abanin","full_name":"Abanin, Dmitry A"}],"status":"public","title":"New Dirac points and multiple Landau level crossings in biased trilayer graphene","_id":"970","abstract":[{"lang":"eng","text":"Recently a new high-mobility Dirac material, trilayer graphene, was realized experimentally. The band structure of ABA-stacked trilayer graphene consists of a monolayer-like and a bilayer-like pair of bands. Here we study electronic properties of ABA-stacked trilayer graphene biased by a perpendicular electric field. We find that the combination of the bias and trigonal warping gives rise to a set of new Dirac points: In each valley, seven species of Dirac fermions with small masses of order of a few meV emerge. The positions and masses of the emergent Dirac fermions are tunable by bias, and one group of Dirac fermions becomes massless at a certain bias value. Therefore, in contrast to bilayer graphene, the conductivity at the neutrality point is expected to show nonmonotonic behavior, becoming of the order of a few e2/h when some Dirac masses vanish. Further, we analyze the evolution of the Landau level spectrum as a function of bias. The emergence of new Dirac points in the band structure translates into new threefold-degenerate groups of Landau levels. This leads to an anomalous quantum Hall effect, in which some quantum Hall steps have a height of 3e2/h. At an intermediate bias, the degeneracies of all Landau levels get lifted, and in this regime all quantum Hall plateaus are spaced by e2/h. Finally, we show that the pattern of Landau level crossings is very sensitive to certain band structure parameters, and can therefore provide a useful tool for determining their precise values."}],"intvolume":"        87","extern":1,"type":"journal_article","publication_status":"published","year":"2013","quality_controlled":0,"doi":"10.1103/PhysRevB.87.115422","volume":87,"publist_id":"6428","oa":1,"issue":"11","publication":"Physical Review B - Condensed Matter and Materials Physics","day":"18","publisher":"American Physical Society","acknowledgement":"We thank Pablo Jarillo-Herrero, Leonardo Campos, and Thiti Taychatanapat for attracting our attention to the problem of biased trilayer graphene, and for many helpful discussions.","month":"03"},{"doi":"10.1103/PhysRevB.87.020501","volume":87,"publist_id":"6429","oa":1,"issue":"2","day":"02","publication":"Physical Review B - Condensed Matter and Materials Physics","publisher":"American Physical Society","month":"01","acknowledgement":"We are grateful to M. V. Feigel'man, A. Kamenev, T. M. Klapwijk, J. P. Pekola, V. V. Ryazanov, J. C. W. Song, and D. Y. Vodolazov for discussions.","citation":{"chicago":"Serbyn, Maksym, and Mikhail Skvortsov. “Onset of Superconductivity in a Voltage-Biased Normal-Superconducting-Normal Microbridge.” <i>Physical Review B - Condensed Matter and Materials Physics</i>. American Physical Society, 2013. <a href=\"https://doi.org/10.1103/PhysRevB.87.020501\">https://doi.org/10.1103/PhysRevB.87.020501</a>.","apa":"Serbyn, M., &#38; Skvortsov, M. (2013). Onset of superconductivity in a voltage-biased normal-superconducting-normal microbridge. <i>Physical Review B - Condensed Matter and Materials Physics</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevB.87.020501\">https://doi.org/10.1103/PhysRevB.87.020501</a>","ama":"Serbyn M, Skvortsov M. Onset of superconductivity in a voltage-biased normal-superconducting-normal microbridge. <i>Physical Review B - Condensed Matter and Materials Physics</i>. 2013;87(2). doi:<a href=\"https://doi.org/10.1103/PhysRevB.87.020501\">10.1103/PhysRevB.87.020501</a>","mla":"Serbyn, Maksym, and Mikhail Skvortsov. “Onset of Superconductivity in a Voltage-Biased Normal-Superconducting-Normal Microbridge.” <i>Physical Review B - Condensed Matter and Materials Physics</i>, vol. 87, no. 2, American Physical Society, 2013, doi:<a href=\"https://doi.org/10.1103/PhysRevB.87.020501\">10.1103/PhysRevB.87.020501</a>.","short":"M. Serbyn, M. Skvortsov, Physical Review B - Condensed Matter and Materials Physics 87 (2013).","ieee":"M. Serbyn and M. Skvortsov, “Onset of superconductivity in a voltage-biased normal-superconducting-normal microbridge,” <i>Physical Review B - Condensed Matter and Materials Physics</i>, vol. 87, no. 2. American Physical Society, 2013.","ista":"Serbyn M, Skvortsov M. 2013. Onset of superconductivity in a voltage-biased normal-superconducting-normal microbridge. Physical Review B - Condensed Matter and Materials Physics. 87(2)."},"date_published":"2013-01-02T00:00:00Z","main_file_link":[{"url":"https://arxiv.org/abs/1208.6004","open_access":"1"}],"date_updated":"2021-01-12T08:22:20Z","fulldoi":"https://doi.org/10.1103/PhysRevB.87.020501","status":"public","date_created":"2018-12-11T11:49:28Z","author":[{"first_name":"Maksym","last_name":"Serbyn","id":"47809E7E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-2399-5827","full_name":"Maksym Serbyn"},{"last_name":"Skvortsov","first_name":"Mikhail","full_name":"Skvortsov, Mikhail A"}],"title":"Onset of superconductivity in a voltage-biased normal-superconducting-normal microbridge","_id":"971","extern":1,"intvolume":"        87","abstract":[{"lang":"eng","text":"We study the stability of the normal state in a mesoscopic NSN junction biased by a constant voltage V with respect to the formation of the superconducting order. Using the linearized time-dependent Ginzburg-Landau equation, we obtain the temperature dependence of the instability line, V inst(T), where nucleation of superconductivity takes place. For sufficiently low biases, a stationary symmetric superconducting state emerges below the instability line. For higher biases, the normal phase is destroyed by the formation of a nonstationary bimodal state with two superconducting nuclei localized near the opposite terminals. The low-temperature and large-voltage behavior of the instability line is highly sensitive to the details of the inelastic relaxation mechanism in the wire. Therefore, experimental studies of Vinst(T) in NSN junctions may be used as an effective tool to access the parameters of the inelastic relaxation in the normal state."}],"publication_status":"published","type":"journal_article","year":"2013","quality_controlled":0},{"issue":"6153","publication":"Science","language":[{"iso":"eng"}],"publist_id":"6430","extern":"1","abstract":[{"lang":"eng","text":"In topological crystalline insulators (TCIs), topology and crystal symmetry intertwine to create surface states with distinct characteristics. The breaking of crystal symmetry in TCIs is predicted to impart mass to the massless Dirac fermions. Here, we report high-resolution scanning tunneling microscopy studies of a TCI, Pb1-xSnxSe that reveal the coexistence of zero-mass Dirac fermions protected by crystal symmetry with massive Dirac fermions consistent with crystal symmetry breaking. In addition, we show two distinct regimes of the Fermi surface topology separated by a Van-Hove singularity at the Lifshitz transition point. Our work paves the way for engineering the Dirac band gap and realizing interaction-driven topological quantum phenomena in TCIs."}],"oa_version":"Preprint","type":"journal_article","status":"public","author":[{"full_name":"Okada, Yoshinori","last_name":"Okada","first_name":"Yoshinori"},{"last_name":"Serbyn","first_name":"Maksym","id":"47809E7E-F248-11E8-B48F-1D18A9856A87","full_name":"Serbyn, Maksym","orcid":"0000-0002-2399-5827"},{"first_name":"Hsin","last_name":"Lin","full_name":"Lin, Hsin"},{"full_name":"Walkup, Daniel","last_name":"Walkup","first_name":"Daniel"},{"full_name":"Zhou, Wenwen","first_name":"Wenwen","last_name":"Zhou"},{"first_name":"Chetan","last_name":"Dhital","full_name":"Dhital, Chetan"},{"full_name":"Neupane, Madhab","last_name":"Neupane","first_name":"Madhab"},{"first_name":"Suyang","last_name":"Xu","full_name":"Xu, Suyang"},{"last_name":"Wang","first_name":"Yungjui","full_name":"Wang, Yungjui"},{"first_name":"Raman","last_name":"Sankar","full_name":"Sankar, Raman"},{"full_name":"Chou, Fangcheng","last_name":"Chou","first_name":"Fangcheng"},{"last_name":"Bansil","first_name":"Arun","full_name":"Bansil, Arun"},{"full_name":"Hasan, Md","first_name":"Md","last_name":"Hasan"},{"first_name":"Stephen","last_name":"Wilson","full_name":"Wilson, Stephen"},{"full_name":"Fu, Liang","first_name":"Liang","last_name":"Fu"},{"full_name":"Madhavan, Vidya","first_name":"Vidya","last_name":"Madhavan"}],"date_created":"2018-12-11T11:49:29Z","_id":"972","title":"Observation of dirac node formation and mass acquisition in a topological crystalline insulator","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_updated":"2021-01-12T08:22:20Z","citation":{"ista":"Okada Y, Serbyn M, Lin H, Walkup D, Zhou W, Dhital C, Neupane M, Xu S, Wang Y, Sankar R, Chou F, Bansil A, Hasan M, Wilson S, Fu L, Madhavan V. 2013. Observation of dirac node formation and mass acquisition in a topological crystalline insulator. Science. 341(6153), 1496–1499.","ieee":"Y. Okada <i>et al.</i>, “Observation of dirac node formation and mass acquisition in a topological crystalline insulator,” <i>Science</i>, vol. 341, no. 6153. American Association for the Advancement of Science, pp. 1496–1499, 2013.","short":"Y. Okada, M. Serbyn, H. Lin, D. Walkup, W. Zhou, C. Dhital, M. Neupane, S. Xu, Y. Wang, R. Sankar, F. Chou, A. Bansil, M. Hasan, S. Wilson, L. Fu, V. Madhavan, Science 341 (2013) 1496–1499.","mla":"Okada, Yoshinori, et al. “Observation of Dirac Node Formation and Mass Acquisition in a Topological Crystalline Insulator.” <i>Science</i>, vol. 341, no. 6153, American Association for the Advancement of Science, 2013, pp. 1496–99, doi:<a href=\"https://doi.org/10.1126/science.1239451\">10.1126/science.1239451</a>.","ama":"Okada Y, Serbyn M, Lin H, et al. Observation of dirac node formation and mass acquisition in a topological crystalline insulator. <i>Science</i>. 2013;341(6153):1496-1499. doi:<a href=\"https://doi.org/10.1126/science.1239451\">10.1126/science.1239451</a>","apa":"Okada, Y., Serbyn, M., Lin, H., Walkup, D., Zhou, W., Dhital, C., … Madhavan, V. (2013). Observation of dirac node formation and mass acquisition in a topological crystalline insulator. <i>Science</i>. American Association for the Advancement of Science. <a href=\"https://doi.org/10.1126/science.1239451\">https://doi.org/10.1126/science.1239451</a>","chicago":"Okada, Yoshinori, Maksym Serbyn, Hsin Lin, Daniel Walkup, Wenwen Zhou, Chetan Dhital, Madhab Neupane, et al. “Observation of Dirac Node Formation and Mass Acquisition in a Topological Crystalline Insulator.” <i>Science</i>. American Association for the Advancement of Science, 2013. <a href=\"https://doi.org/10.1126/science.1239451\">https://doi.org/10.1126/science.1239451</a>."},"page":"1496 - 1499","month":"01","publisher":"American Association for the Advancement of Science","external_id":{"arxiv":["1305.2823"]},"oa":1,"day":"01","doi":"10.1126/science.1239451","volume":341,"intvolume":"       341","quality_controlled":"1","year":"2013","publication_status":"published","arxiv":1,"main_file_link":[{"url":"https://arxiv.org/abs/1305.2823","open_access":"1"}],"fulldoi":"https://doi.org/10.1126/science.1239451","date_published":"2013-01-01T00:00:00Z"},{"date_published":"2013-09-17T00:00:00Z","citation":{"apa":"Serbyn, M., Papić, Z., &#38; Abanin, D. (2013). Local conservation laws and the structure of the many body localized states. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevLett.111.127201\">https://doi.org/10.1103/PhysRevLett.111.127201</a>","chicago":"Serbyn, Maksym, Zlatko Papić, and Dmitry Abanin. “Local Conservation Laws and the Structure of the Many Body Localized States.” <i>Physical Review Letters</i>. American Physical Society, 2013. <a href=\"https://doi.org/10.1103/PhysRevLett.111.127201\">https://doi.org/10.1103/PhysRevLett.111.127201</a>.","ieee":"M. Serbyn, Z. Papić, and D. Abanin, “Local conservation laws and the structure of the many body localized states,” <i>Physical Review Letters</i>, vol. 111, no. 12. American Physical Society, 2013.","short":"M. Serbyn, Z. Papić, D. Abanin, Physical Review Letters 111 (2013).","ista":"Serbyn M, Papić Z, Abanin D. 2013. Local conservation laws and the structure of the many body localized states. Physical Review Letters. 111(12).","ama":"Serbyn M, Papić Z, Abanin D. Local conservation laws and the structure of the many body localized states. <i>Physical Review Letters</i>. 2013;111(12). doi:<a href=\"https://doi.org/10.1103/PhysRevLett.111.127201\">10.1103/PhysRevLett.111.127201</a>","mla":"Serbyn, Maksym, et al. “Local Conservation Laws and the Structure of the Many Body Localized States.” <i>Physical Review Letters</i>, vol. 111, no. 12, American Physical Society, 2013, doi:<a href=\"https://doi.org/10.1103/PhysRevLett.111.127201\">10.1103/PhysRevLett.111.127201</a>."},"date_updated":"2021-01-12T08:22:21Z","fulldoi":"https://doi.org/10.1103/PhysRevLett.111.127201","main_file_link":[{"url":"https://arxiv.org/abs/1305.5554","open_access":"1"}],"title":"Local conservation laws and the structure of the many body localized states","_id":"973","date_created":"2018-12-11T11:49:29Z","status":"public","author":[{"id":"47809E7E-F248-11E8-B48F-1D18A9856A87","last_name":"Serbyn","first_name":"Maksym","full_name":"Maksym Serbyn","orcid":"0000-0002-2399-5827"},{"last_name":"Papić","first_name":"Zlatko","full_name":"Papić, Zlatko"},{"full_name":"Abanin, Dmitry A","last_name":"Abanin","first_name":"Dmitry"}],"publication_status":"published","type":"journal_article","year":"2013","quality_controlled":0,"extern":1,"intvolume":"       111","abstract":[{"text":"We construct a complete set of local integrals of motion that characterize the many-body localized (MBL) phase. Our approach relies on the assumption that local perturbations act locally on the eigenstates in the MBL phase, which is supported by numerical simulations of the random-field XXZ spin chain. We describe the structure of the eigenstates in the MBL phase and discuss the implications of local conservation laws for its nonequilibrium quantum dynamics. We argue that the many-body localization can be used to protect coherence in the system by suppressing relaxation between eigenstates with different local integrals of motion.","lang":"eng"}],"volume":111,"publist_id":"6424","doi":"10.1103/PhysRevLett.111.127201","publication":"Physical Review Letters","day":"17","oa":1,"issue":"12","publisher":"American Physical Society","month":"09","acknowledgement":"We thank J. Moore for useful discussions. Research at Perimeter Institute is supported by the Government of Canada through Industry Canada and by the Province of Ontario through the Ministry of Economic Development & Innovation. Z. P. was supported by DOE Grant No. DE-SC0002140. M. S. was supported by the National Science Foundation under Grant No. DMR-1104498. The simulations presented in this article were performed on computational resources supported by the High Performance Computing Center (PICSciE) at Princeton University."},{"external_id":{"arxiv":["1212.5179"]},"month":"07","publisher":"American Physical Society","day":"19","oa":1,"volume":88,"doi":"10.1103/PhysRevB.88.024419","quality_controlled":"1","year":"2013","publication_status":"published","intvolume":"        88","fulldoi":"https://doi.org/10.1103/PhysRevB.88.024419","arxiv":1,"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1212.5179"}],"date_published":"2013-07-19T00:00:00Z","publication":"Physical Review B - Condensed Matter and Materials Physics","issue":"2","language":[{"iso":"eng"}],"publist_id":"6425","type":"journal_article","oa_version":"Preprint","extern":"1","abstract":[{"lang":"eng","text":"We propose a possible realization of the overscreened Kondo impurity problem by a magnetic s=1/2 impurity embedded in a two-dimensional S=1 U(1) spin liquid with a Fermi surface. This problem contains an interesting interplay between non-Fermi-liquid behavior induced by a U(1) gauge field coupled to fermions and a non-Fermi-liquid fixed point in the overscreened Kondo problem. Using a large-N expansion together with an expansion in the dynamical exponent of the gauge field, we find that the coupling to the gauge field leads to weak but observable changes in the physical properties of the system at the overscreened Kondo fixed point. We discuss the extrapolation of this result to a physical case and argue that the realization of overscreened Kondo physics could lead to observations of effects due to gauge fields."}],"_id":"974","title":"Overscreened Kondo fixed point in S=1 spin liquid","date_created":"2018-12-11T11:49:29Z","status":"public","author":[{"id":"47809E7E-F248-11E8-B48F-1D18A9856A87","last_name":"Serbyn","first_name":"Maksym","orcid":"0000-0002-2399-5827","full_name":"Serbyn, Maksym"},{"full_name":"Senthil, Todadri","last_name":"Senthil","first_name":"Todadri"},{"full_name":"Lee, Patrick","first_name":"Patrick","last_name":"Lee"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_updated":"2021-01-12T08:22:21Z","citation":{"ama":"Serbyn M, Senthil T, Lee P. Overscreened Kondo fixed point in S=1 spin liquid. <i>Physical Review B - Condensed Matter and Materials Physics</i>. 2013;88(2). doi:<a href=\"https://doi.org/10.1103/PhysRevB.88.024419\">10.1103/PhysRevB.88.024419</a>","mla":"Serbyn, Maksym, et al. “Overscreened Kondo Fixed Point in S=1 Spin Liquid.” <i>Physical Review B - Condensed Matter and Materials Physics</i>, vol. 88, no. 2, American Physical Society, 2013, doi:<a href=\"https://doi.org/10.1103/PhysRevB.88.024419\">10.1103/PhysRevB.88.024419</a>.","ieee":"M. Serbyn, T. Senthil, and P. Lee, “Overscreened Kondo fixed point in S=1 spin liquid,” <i>Physical Review B - Condensed Matter and Materials Physics</i>, vol. 88, no. 2. American Physical Society, 2013.","ista":"Serbyn M, Senthil T, Lee P. 2013. Overscreened Kondo fixed point in S=1 spin liquid. Physical Review B - Condensed Matter and Materials Physics. 88(2).","short":"M. Serbyn, T. Senthil, P. Lee, Physical Review B - Condensed Matter and Materials Physics 88 (2013).","chicago":"Serbyn, Maksym, Todadri Senthil, and Patrick Lee. “Overscreened Kondo Fixed Point in S=1 Spin Liquid.” <i>Physical Review B - Condensed Matter and Materials Physics</i>. American Physical Society, 2013. <a href=\"https://doi.org/10.1103/PhysRevB.88.024419\">https://doi.org/10.1103/PhysRevB.88.024419</a>.","apa":"Serbyn, M., Senthil, T., &#38; Lee, P. (2013). Overscreened Kondo fixed point in S=1 spin liquid. <i>Physical Review B - Condensed Matter and Materials Physics</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevB.88.024419\">https://doi.org/10.1103/PhysRevB.88.024419</a>"}},{"author":[{"full_name":"Zagorsky, Benjamin","last_name":"Zagorsky","first_name":"Benjamin"},{"orcid":"0000-0002-0170-7353","full_name":"Reiter, Johannes","id":"4A918E98-F248-11E8-B48F-1D18A9856A87","last_name":"Reiter","first_name":"Johannes"},{"first_name":"Krishnendu","last_name":"Chatterjee","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","full_name":"Chatterjee, Krishnendu","orcid":"0000-0002-4561-241X"},{"full_name":"Nowak, Martin","last_name":"Nowak","first_name":"Martin"}],"date_created":"2021-07-28T15:45:07Z","status":"public","_id":"9749","title":"Forgiver triumphs in alternating prisoner's dilemma ","abstract":[{"lang":"eng","text":"Cooperative behavior, where one individual incurs a cost to help another, is a wide spread phenomenon. Here we study direct reciprocity in the context of the alternating Prisoner's Dilemma. We consider all strategies that can be implemented by one and two-state automata. We calculate the payoff matrix of all pairwise encounters in the presence of noise. We explore deterministic selection dynamics with and without mutation. Using different error rates and payoff values, we observe convergence to a small number of distinct equilibria. Two of them are uncooperative strict Nash equilibria representing always-defect (ALLD) and Grim. The third equilibrium is mixed and represents a cooperative alliance of several strategies, dominated by a strategy which we call Forgiver. Forgiver cooperates whenever the opponent has cooperated; it defects once when the opponent has defected, but subsequently Forgiver attempts to re-establish cooperation even if the opponent has defected again. Forgiver is not an evolutionarily stable strategy, but the alliance, which it rules, is asymptotically stable. For a wide range of parameter values the most commonly observed outcome is convergence to the mixed equilibrium, dominated by Forgiver. Our results show that although forgiving might incur a short-term loss it can lead to a long-term gain. Forgiveness facilitates stable cooperation in the presence of exploitation and noise."}],"year":"2013","type":"research_data_reference","oa_version":"Published Version","citation":{"apa":"Zagorsky, B., Reiter, J., Chatterjee, K., &#38; Nowak, M. (2013). Forgiver triumphs in alternating prisoner’s dilemma . Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pone.0080814.s001\">https://doi.org/10.1371/journal.pone.0080814.s001</a>","chicago":"Zagorsky, Benjamin, Johannes Reiter, Krishnendu Chatterjee, and Martin Nowak. “Forgiver Triumphs in Alternating Prisoner’s Dilemma .” Public Library of Science, 2013. <a href=\"https://doi.org/10.1371/journal.pone.0080814.s001\">https://doi.org/10.1371/journal.pone.0080814.s001</a>.","short":"B. Zagorsky, J. Reiter, K. Chatterjee, M. Nowak, (2013).","ista":"Zagorsky B, Reiter J, Chatterjee K, Nowak M. 2013. Forgiver triumphs in alternating prisoner’s dilemma , Public Library of Science, <a href=\"https://doi.org/10.1371/journal.pone.0080814.s001\">10.1371/journal.pone.0080814.s001</a>.","ieee":"B. Zagorsky, J. Reiter, K. Chatterjee, and M. Nowak, “Forgiver triumphs in alternating prisoner’s dilemma .” Public Library of Science, 2013.","mla":"Zagorsky, Benjamin, et al. <i>Forgiver Triumphs in Alternating Prisoner’s Dilemma </i>. Public Library of Science, 2013, doi:<a href=\"https://doi.org/10.1371/journal.pone.0080814.s001\">10.1371/journal.pone.0080814.s001</a>.","ama":"Zagorsky B, Reiter J, Chatterjee K, Nowak M. Forgiver triumphs in alternating prisoner’s dilemma . 2013. doi:<a href=\"https://doi.org/10.1371/journal.pone.0080814.s001\">10.1371/journal.pone.0080814.s001</a>"},"article_processing_charge":"No","date_published":"2013-12-12T00:00:00Z","related_material":{"record":[{"relation":"used_in_publication","id":"2247","status":"public"}]},"user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","fulldoi":"https://doi.org/10.1371/journal.pone.0080814.s001","date_updated":"2025-09-29T14:30:03Z","day":"12","department":[{"_id":"KrCh"}],"month":"12","publisher":"Public Library of Science","doi":"10.1371/journal.pone.0080814.s001"},{"publisher":"American Physical Society","month":"06","acknowledgement":"We would like to thank E. Altman and J. Moore for useful comments on the manuscript. This research was supported in part by Perimeter Institute for Theoretical Physics. Research at Perimeter Institute is supported by the Government of Canada through Industry Canada and by the Province of Ontario through the Ministry of Economic Development & Innovation. Z. P. was supported by DOE Grant No. DE-SC0002140. The simulations presented in this article were performed on computational resources supported by the High Performance Computing Center (PICSciE) at Princeton University.","publication":"Physical Review Letters","day":"28","oa":1,"issue":"26","volume":110,"publist_id":"6426","doi":"10.1103/PhysRevLett.110.260601","type":"journal_article","publication_status":"published","quality_controlled":0,"year":"2013","abstract":[{"lang":"eng","text":"Recent numerical work by Bardarson, Pollmann, and Moore revealed a slow, logarithmic in time, growth of the entanglement entropy for initial product states in a putative many-body localized phase. We show that this surprising phenomenon results from the dephasing due to exponentially small interaction-induced corrections to the eigenenergies of different states. For weak interactions, we find that the entanglement entropy grows as ξln (Vt/), where V is the interaction strength, and ξ is the single-particle localization length. The saturated value of the entanglement entropy at long times is determined by the participation ratios of the initial state over the eigenstates of the subsystem. Our work shows that the logarithmic entanglement growth is a universal phenomenon characteristic of the many-body localized phase in any number of spatial dimensions, and reveals a broad hierarchy of dephasing time scales present in such a phase."}],"extern":1,"intvolume":"       110","title":"Universal slow growth of entanglement in interacting strongly disordered systems","_id":"975","date_created":"2018-12-11T11:49:29Z","author":[{"id":"47809E7E-F248-11E8-B48F-1D18A9856A87","last_name":"Serbyn","first_name":"Maksym","full_name":"Maksym Serbyn","orcid":"0000-0002-2399-5827"},{"full_name":"Papić, Zlatko","last_name":"Papić","first_name":"Zlatko"},{"first_name":"Dmitry","last_name":"Abanin","full_name":"Abanin, Dmitry A"}],"status":"public","date_updated":"2021-01-12T08:22:22Z","fulldoi":"https://doi.org/10.1103/PhysRevLett.110.260601","main_file_link":[{"url":"https://arxiv.org/abs/1304.4605","open_access":"1"}],"date_published":"2013-06-28T00:00:00Z","citation":{"apa":"Serbyn, M., Papić, Z., &#38; Abanin, D. (2013). Universal slow growth of entanglement in interacting strongly disordered systems. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevLett.110.260601\">https://doi.org/10.1103/PhysRevLett.110.260601</a>","chicago":"Serbyn, Maksym, Zlatko Papić, and Dmitry Abanin. “Universal Slow Growth of Entanglement in Interacting Strongly Disordered Systems.” <i>Physical Review Letters</i>. American Physical Society, 2013. <a href=\"https://doi.org/10.1103/PhysRevLett.110.260601\">https://doi.org/10.1103/PhysRevLett.110.260601</a>.","ieee":"M. Serbyn, Z. Papić, and D. Abanin, “Universal slow growth of entanglement in interacting strongly disordered systems,” <i>Physical Review Letters</i>, vol. 110, no. 26. American Physical Society, 2013.","short":"M. Serbyn, Z. Papić, D. Abanin, Physical Review Letters 110 (2013).","ista":"Serbyn M, Papić Z, Abanin D. 2013. Universal slow growth of entanglement in interacting strongly disordered systems. Physical Review Letters. 110(26).","ama":"Serbyn M, Papić Z, Abanin D. Universal slow growth of entanglement in interacting strongly disordered systems. <i>Physical Review Letters</i>. 2013;110(26). doi:<a href=\"https://doi.org/10.1103/PhysRevLett.110.260601\">10.1103/PhysRevLett.110.260601</a>","mla":"Serbyn, Maksym, et al. “Universal Slow Growth of Entanglement in Interacting Strongly Disordered Systems.” <i>Physical Review Letters</i>, vol. 110, no. 26, American Physical Society, 2013, doi:<a href=\"https://doi.org/10.1103/PhysRevLett.110.260601\">10.1103/PhysRevLett.110.260601</a>."}},{"fulldoi":"https://doi.org/10.5061/dryad.b1q2n","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","date_updated":"2025-09-29T13:41:12Z","main_file_link":[{"url":"https://doi.org/10.5061/dryad.b1q2n","open_access":"1"}],"related_material":{"record":[{"id":"2853","relation":"used_in_publication","status":"public"}]},"date_published":"2013-03-21T00:00:00Z","article_processing_charge":"No","citation":{"chicago":"Refardt, Dominik, Tobias Bergmiller, and Rolf Kümmerli. “Data from: Altruism Can Evolve When Relatedness Is Low: Evidence from Bacteria Committing Suicide upon Phage Infection.” Dryad, 2013. <a href=\"https://doi.org/10.5061/dryad.b1q2n\">https://doi.org/10.5061/dryad.b1q2n</a>.","apa":"Refardt, D., Bergmiller, T., &#38; Kümmerli, R. (2013). Data from: Altruism can evolve when relatedness is low: evidence from bacteria committing suicide upon phage infection. Dryad. <a href=\"https://doi.org/10.5061/dryad.b1q2n\">https://doi.org/10.5061/dryad.b1q2n</a>","mla":"Refardt, Dominik, et al. <i>Data from: Altruism Can Evolve When Relatedness Is Low: Evidence from Bacteria Committing Suicide upon Phage Infection</i>. Dryad, 2013, doi:<a href=\"https://doi.org/10.5061/dryad.b1q2n\">10.5061/dryad.b1q2n</a>.","ama":"Refardt D, Bergmiller T, Kümmerli R. Data from: Altruism can evolve when relatedness is low: evidence from bacteria committing suicide upon phage infection. 2013. doi:<a href=\"https://doi.org/10.5061/dryad.b1q2n\">10.5061/dryad.b1q2n</a>","ieee":"D. Refardt, T. Bergmiller, and R. Kümmerli, “Data from: Altruism can evolve when relatedness is low: evidence from bacteria committing suicide upon phage infection.” Dryad, 2013.","ista":"Refardt D, Bergmiller T, Kümmerli R. 2013. Data from: Altruism can evolve when relatedness is low: evidence from bacteria committing suicide upon phage infection, Dryad, <a href=\"https://doi.org/10.5061/dryad.b1q2n\">10.5061/dryad.b1q2n</a>.","short":"D. Refardt, T. Bergmiller, R. Kümmerli, (2013)."},"year":"2013","type":"research_data_reference","oa_version":"Published Version","abstract":[{"text":"High relatedness among interacting individuals has generally been considered a precondition for the evolution of altruism. However, kin-selection theory also predicts the evolution of altruism when relatedness is low, as long as the cost of the altruistic act is minor compared to its benefit. Here, we demonstrate evidence for a low-cost altruistic act in bacteria. We investigated Escherichia coli responding to the attack of an obligately lytic phage by committing suicide in order to prevent parasite transmission to nearby relatives. We found that bacterial suicide provides large benefits to survivors at marginal costs to committers. The cost of suicide was low because infected cells are moribund, rapidly dying upon phage infection, such that no more opportunity for reproduction remains. As a consequence of its marginal cost, host suicide was selectively favoured even when relatedness between committers and survivors approached zero. Altogether, our findings demonstrate that low-cost suicide can evolve with ease, represents an effective host-defence strategy, and seems to be widespread among microbes. Moreover, low-cost suicide might also occur in higher organisms as exemplified by infected social insect workers leaving the colony to die in isolation.","lang":"eng"}],"_id":"9751","title":"Data from: Altruism can evolve when relatedness is low: evidence from bacteria committing suicide upon phage infection","date_created":"2021-07-30T08:08:09Z","author":[{"full_name":"Refardt, Dominik","first_name":"Dominik","last_name":"Refardt"},{"id":"2C471CFA-F248-11E8-B48F-1D18A9856A87","last_name":"Bergmiller","first_name":"Tobias","full_name":"Bergmiller, Tobias","orcid":"0000-0001-5396-4346"},{"first_name":"Rolf","last_name":"Kümmerli","full_name":"Kümmerli, Rolf"}],"status":"public","doi":"10.5061/dryad.b1q2n","month":"03","department":[{"_id":"CaGu"}],"publisher":"Dryad","day":"21","oa":1},{"doi":"10.5061/dryad.r3r60","day":"01","oa":1,"publisher":"Dryad","department":[{"_id":"NiBa"}],"month":"10","date_published":"2013-10-01T00:00:00Z","related_material":{"record":[{"status":"public","id":"2170","relation":"used_in_publication"}]},"citation":{"chicago":"Hearn, Jack, Graham Stone, Nicholas H Barton, Konrad Lohse, and Lynsey Bunnefeld. “Data from: Likelihood-Based Inference of Population History from Low Coverage de Novo Genome Assemblies.” Dryad, 2013. <a href=\"https://doi.org/10.5061/dryad.r3r60\">https://doi.org/10.5061/dryad.r3r60</a>.","apa":"Hearn, J., Stone, G., Barton, N. H., Lohse, K., &#38; Bunnefeld, L. (2013). Data from: Likelihood-based inference of population history from low coverage de novo genome assemblies. Dryad. <a href=\"https://doi.org/10.5061/dryad.r3r60\">https://doi.org/10.5061/dryad.r3r60</a>","mla":"Hearn, Jack, et al. <i>Data from: Likelihood-Based Inference of Population History from Low Coverage de Novo Genome Assemblies</i>. Dryad, 2013, doi:<a href=\"https://doi.org/10.5061/dryad.r3r60\">10.5061/dryad.r3r60</a>.","ama":"Hearn J, Stone G, Barton NH, Lohse K, Bunnefeld L. Data from: Likelihood-based inference of population history from low coverage de novo genome assemblies. 2013. doi:<a href=\"https://doi.org/10.5061/dryad.r3r60\">10.5061/dryad.r3r60</a>","short":"J. Hearn, G. Stone, N.H. Barton, K. Lohse, L. Bunnefeld, (2013).","ista":"Hearn J, Stone G, Barton NH, Lohse K, Bunnefeld L. 2013. Data from: Likelihood-based inference of population history from low coverage de novo genome assemblies, Dryad, <a href=\"https://doi.org/10.5061/dryad.r3r60\">10.5061/dryad.r3r60</a>.","ieee":"J. Hearn, G. Stone, N. H. Barton, K. Lohse, and L. Bunnefeld, “Data from: Likelihood-based inference of population history from low coverage de novo genome assemblies.” Dryad, 2013."},"article_processing_charge":"No","date_updated":"2025-09-29T11:38:51Z","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","fulldoi":"https://doi.org/10.5061/dryad.r3r60","main_file_link":[{"url":"https://doi.org/10.5061/dryad.r3r60","open_access":"1"}],"title":"Data from: Likelihood-based inference of population history from low coverage de novo genome assemblies","_id":"9754","author":[{"last_name":"Hearn","first_name":"Jack","full_name":"Hearn, Jack"},{"first_name":"Graham","last_name":"Stone","full_name":"Stone, Graham"},{"id":"4880FE40-F248-11E8-B48F-1D18A9856A87","first_name":"Nicholas H","last_name":"Barton","full_name":"Barton, Nicholas H","orcid":"0000-0002-8548-5240"},{"full_name":"Lohse, Konrad","first_name":"Konrad","last_name":"Lohse"},{"full_name":"Bunnefeld, Lynsey","last_name":"Bunnefeld","first_name":"Lynsey"}],"status":"public","date_created":"2021-07-30T08:31:22Z","oa_version":"Published Version","type":"research_data_reference","year":"2013","abstract":[{"text":"Short-read sequencing technologies have in principle made it feasible to draw detailed inferences about the recent history of any organism. In practice, however, this remains challenging due to the difficulty of genome assembly in most organisms and the lack of statistical methods powerful enough to discriminate among recent, non-equilibrium histories. We address both the assembly and inference challenges. We develop a bioinformatic pipeline for generating outgroup-rooted alignments of orthologous sequence blocks from de novo low-coverage short-read data for a small number of genomes, and show how such sequence blocks can be used to fit explicit models of population divergence and admixture in a likelihood framework. To illustrate our approach, we reconstruct the Pleistocene history of an oak-feeding insect (the oak gallwasp Biorhiza pallida) which, in common with many other taxa, was restricted during Pleistocene ice ages to a longitudinal series of southern refugia spanning theWestern Palaearctic. Our analysis of sequence blocks sampled from a single genome from each of three major glacial refugia reveals support for an unexpected history dominated by recent admixture. Despite the fact that 80% of the genome is affected by admixture during the last glacial cycle, we are able to infer the deeper divergence history of these populations. These inferences are robust to variation in block length, mutation model, and the sampling location of individual genomes within refugia. This combination of de novo assembly and numerical likelihood calculation provides a powerful framework for estimating recent population history that can be applied to any organism without the need for prior genetic resources.","lang":"eng"}]},{"publist_id":"6427","volume":87,"doi":"10.1103/PhysRevB.87.174424","publication":"Physical Review B - Condensed Matter and Materials Physics","day":"22","issue":"17","oa":1,"acknowledgement":"M. S. is grateful to X.-G. Wen, L. Levitov, M. Metlitski, K. Michaeli, K.-T. Chen, and A. Potter for many useful discussions. We acknowledge support by Grant No. NSF DMR 1104498. We acknowledge the hospitality of KITP, where final stages of this project were completed.","month":"05","publisher":"American Physical Society","date_published":"2013-05-22T00:00:00Z","citation":{"mla":"Serbyn, Maksym, and Patrick Lee. “Spinon-Phonon Interaction in Algebraic Spin Liquids.” <i>Physical Review B - Condensed Matter and Materials Physics</i>, vol. 87, no. 17, American Physical Society, 2013, doi:<a href=\"https://doi.org/10.1103/PhysRevB.87.174424\">10.1103/PhysRevB.87.174424</a>.","ama":"Serbyn M, Lee P. Spinon-phonon interaction in algebraic spin liquids. <i>Physical Review B - Condensed Matter and Materials Physics</i>. 2013;87(17). doi:<a href=\"https://doi.org/10.1103/PhysRevB.87.174424\">10.1103/PhysRevB.87.174424</a>","ieee":"M. Serbyn and P. Lee, “Spinon-phonon interaction in algebraic spin liquids,” <i>Physical Review B - Condensed Matter and Materials Physics</i>, vol. 87, no. 17. American Physical Society, 2013.","short":"M. Serbyn, P. Lee, Physical Review B - Condensed Matter and Materials Physics 87 (2013).","ista":"Serbyn M, Lee P. 2013. Spinon-phonon interaction in algebraic spin liquids. Physical Review B - Condensed Matter and Materials Physics. 87(17).","chicago":"Serbyn, Maksym, and Patrick Lee. “Spinon-Phonon Interaction in Algebraic Spin Liquids.” <i>Physical Review B - Condensed Matter and Materials Physics</i>. American Physical Society, 2013. <a href=\"https://doi.org/10.1103/PhysRevB.87.174424\">https://doi.org/10.1103/PhysRevB.87.174424</a>.","apa":"Serbyn, M., &#38; Lee, P. (2013). Spinon-phonon interaction in algebraic spin liquids. <i>Physical Review B - Condensed Matter and Materials Physics</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevB.87.174424\">https://doi.org/10.1103/PhysRevB.87.174424</a>"},"fulldoi":"https://doi.org/10.1103/PhysRevB.87.174424","date_updated":"2021-01-12T08:22:22Z","main_file_link":[{"url":"https://arxiv.org/abs/1303.0772","open_access":"1"}],"_id":"976","title":"Spinon-phonon interaction in algebraic spin liquids","status":"public","author":[{"id":"47809E7E-F248-11E8-B48F-1D18A9856A87","first_name":"Maksym","last_name":"Serbyn","full_name":"Maksym Serbyn","orcid":"0000-0002-2399-5827"},{"last_name":"Lee","first_name":"Patrick","full_name":"Lee, Patrick"}],"date_created":"2018-12-11T11:49:30Z","year":"2013","quality_controlled":0,"type":"journal_article","publication_status":"published","extern":1,"intvolume":"        87","abstract":[{"lang":"eng","text":"Motivated by a search for experimental probes to access the physics of fractionalized excitations called spinons in spin liquids, we study the interaction of spinons with lattice vibrations. We consider the case of algebraic spin liquid, when spinons have fermionic statistics and a Dirac-like dispersion. We establish the general procedure for deriving spinon-phonon interactions, which is based on symmetry considerations. The procedure is illustrated for four different algebraic spin liquids: π-flux and staggered-flux phases on a square lattice, π-flux phase on a kagome lattice, and zero-flux phase on a honeycomb lattice. Although the low-energy description is similar for all these phases, different underlying symmetry groups lead to a distinct form of spinon-phonon interaction Hamiltonian. The explicit form of the spinon-phonon interaction is used to estimate the attenuation of ultrasound in an algebraic spin liquid. The prospects of the sound attenuation as a probe of spinons are discussed."}]},{"abstract":[{"lang":"eng","text":"In order to guarantee that each method of a data structure updates the logical state exactly once, al-most all non-blocking implementations employ Compare-And-Swap (CAS) based synchronization. For FIFO  queue  implementations  this  translates  into  concurrent  enqueue  or  dequeue  methods competing among themselves to update the same variable, the tail or the head, respectively, leading to high contention and poor scalability. Recent non-blocking queue implementations try to alleviate high contentionby increasing the number of contention points, all the while using CAS-based synchronization. Furthermore, obtaining a wait-free implementation with competition is achieved by additional synchronization which leads to further degradation of performance.In this paper we formalize the notion of competitiveness of a synchronizing statement which can beused as a measure for the scalability of concurrent implementations.  We present a new queue implementation, the Speculative Pairing (SP) queue, which, as we show, decreases competitiveness by using Fetch-And-Increment (FAI) instead of CAS. We prove that the SP queue is linearizable and lock-free.We also show that replacing CAS with FAI leads to wait-freedom for dequeue methods without an adverse effect on performance.  In fact, our experiments suggest that the SP queue can perform and scale better than the state-of-the-art queue implementations."}],"publication_status":"published","type":"technical_report","oa_version":"Published Version","year":"2013","ddc":["000","005"],"date_created":"2019-05-13T14:13:27Z","author":[{"first_name":"Thomas A","last_name":"Henzinger","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","full_name":"Henzinger, Thomas A","orcid":"0000−0002−2985−7724"},{"full_name":"Payer, Hannes","first_name":"Hannes","last_name":"Payer"},{"full_name":"Sezgin, Ali","id":"4C7638DA-F248-11E8-B48F-1D18A9856A87","first_name":"Ali","last_name":"Sezgin"}],"status":"public","title":"Replacing competition with cooperation to achieve scalable lock-free FIFO queues ","_id":"6440","date_updated":"2020-07-14T23:06:19Z","fulldoi":"https://doi.org/10.15479/AT:IST-2013-124-v1-1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"mla":"Henzinger, Thomas A., et al. <i>Replacing Competition with Cooperation to Achieve Scalable Lock-Free FIFO Queues </i>. IST Austria, 2013, doi:<a href=\"https://doi.org/10.15479/AT:IST-2013-124-v1-1\">10.15479/AT:IST-2013-124-v1-1</a>.","ama":"Henzinger TA, Payer H, Sezgin A. <i>Replacing Competition with Cooperation to Achieve Scalable Lock-Free FIFO Queues </i>. IST Austria; 2013. doi:<a href=\"https://doi.org/10.15479/AT:IST-2013-124-v1-1\">10.15479/AT:IST-2013-124-v1-1</a>","ieee":"T. A. Henzinger, H. Payer, and A. Sezgin, <i>Replacing competition with cooperation to achieve scalable lock-free FIFO queues </i>. IST Austria, 2013.","short":"T.A. Henzinger, H. Payer, A. Sezgin, Replacing Competition with Cooperation to Achieve Scalable Lock-Free FIFO Queues , IST Austria, 2013.","ista":"Henzinger TA, Payer H, Sezgin A. 2013. Replacing competition with cooperation to achieve scalable lock-free FIFO queues , IST Austria, 23p.","chicago":"Henzinger, Thomas A, Hannes Payer, and Ali Sezgin. <i>Replacing Competition with Cooperation to Achieve Scalable Lock-Free FIFO Queues </i>. IST Austria, 2013. <a href=\"https://doi.org/10.15479/AT:IST-2013-124-v1-1\">https://doi.org/10.15479/AT:IST-2013-124-v1-1</a>.","apa":"Henzinger, T. A., Payer, H., &#38; Sezgin, A. (2013). <i>Replacing competition with cooperation to achieve scalable lock-free FIFO queues </i>. IST Austria. <a href=\"https://doi.org/10.15479/AT:IST-2013-124-v1-1\">https://doi.org/10.15479/AT:IST-2013-124-v1-1</a>"},"page":"23","has_accepted_license":"1","file_date_updated":"2020-07-14T12:47:30Z","alternative_title":["IST Austria Technical Report"],"date_published":"2013-06-13T00:00:00Z","publisher":"IST Austria","month":"06","publication_identifier":{"issn":["2664-1690"]},"department":[{"_id":"ToHe"}],"oa":1,"pubrep_id":"124","day":"13","doi":"10.15479/AT:IST-2013-124-v1-1","file":[{"file_size":549684,"date_updated":"2020-07-14T12:47:30Z","content_type":"application/pdf","file_name":"2013_TechRep_Henzinger.pdf","file_id":"6441","creator":"dernst","relation":"main_file","access_level":"open_access","checksum":"a219ba4eada6cd62befed52262ee15d4","date_created":"2019-05-13T14:11:39Z"}],"language":[{"iso":"eng"}]},{"doi":"10.5201/ipol.2013.53","file":[{"file_id":"6769","date_updated":"2020-07-14T12:47:40Z","content_type":"application/pdf","file_name":"2013_IPOL_Mondelli.pdf","file_size":4306158,"date_created":"2019-08-05T12:33:40Z","checksum":"83b7d429bc248c6c461229d3504fb139","access_level":"open_access","relation":"main_file","creator":"dernst"}],"volume":3,"publisher":"Image Processing On Line","month":"07","oa":1,"day":"11","fulldoi":"https://doi.org/10.5201/ipol.2013.53","has_accepted_license":"1","date_published":"2013-07-11T00:00:00Z","file_date_updated":"2020-07-14T12:47:40Z","intvolume":"         3","publication_status":"published","quality_controlled":"1","year":"2013","tmp":{"image":"/images/cc_by_nc_sa.png","name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)","short":"CC BY-NC-SA (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode"},"ddc":["510"],"language":[{"iso":"eng"}],"publication_identifier":{"issn":["2105-1232"]},"publication":"Image Processing On Line","date_updated":"2021-01-12T08:08:56Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"chicago":"Mondelli, Marco. “A Finite Difference Scheme for the Stack Filter Simulating the MCM.” <i>Image Processing On Line</i>. Image Processing On Line, 2013. <a href=\"https://doi.org/10.5201/ipol.2013.53\">https://doi.org/10.5201/ipol.2013.53</a>.","apa":"Mondelli, M. (2013). A finite difference scheme for the stack filter simulating the MCM. <i>Image Processing On Line</i>. Image Processing On Line. <a href=\"https://doi.org/10.5201/ipol.2013.53\">https://doi.org/10.5201/ipol.2013.53</a>","ama":"Mondelli M. A finite difference scheme for the stack filter simulating the MCM. <i>Image Processing On Line</i>. 2013;3:68-111. doi:<a href=\"https://doi.org/10.5201/ipol.2013.53\">10.5201/ipol.2013.53</a>","mla":"Mondelli, Marco. “A Finite Difference Scheme for the Stack Filter Simulating the MCM.” <i>Image Processing On Line</i>, vol. 3, Image Processing On Line, 2013, pp. 68–111, doi:<a href=\"https://doi.org/10.5201/ipol.2013.53\">10.5201/ipol.2013.53</a>.","ista":"Mondelli M. 2013. A finite difference scheme for the stack filter simulating the MCM. Image Processing On Line. 3, 68–111.","short":"M. Mondelli, Image Processing On Line 3 (2013) 68–111.","ieee":"M. Mondelli, “A finite difference scheme for the stack filter simulating the MCM,” <i>Image Processing On Line</i>, vol. 3. Image Processing On Line, pp. 68–111, 2013."},"page":"68-111","license":"https://creativecommons.org/licenses/by-nc-sa/4.0/","extern":"1","abstract":[{"lang":"eng","text":"The paper presents an algorithm that applies a stack filter simulating the Mean Curvature Motion equation via a finite difference scheme."}],"type":"journal_article","oa_version":"Published Version","article_type":"original","author":[{"orcid":"0000-0002-3242-7020","full_name":"Mondelli, Marco","id":"27EB676C-8706-11E9-9510-7717E6697425","last_name":"Mondelli","first_name":"Marco"}],"status":"public","date_created":"2019-08-05T12:30:38Z","title":"A finite difference scheme for the stack filter simulating the MCM","_id":"6768"},{"date_published":"2013-09-01T00:00:00Z","citation":{"chicago":"Ottakam Thotiyl, Muhammed M., Stefan Alexander Freunberger, Zhangquan Peng, Yuhui Chen, Zheng Liu, and Peter G. Bruce. “A Stable Cathode for the Aprotic Li–O2 Battery.” <i>Nature Materials</i>. Springer Nature, 2013. <a href=\"https://doi.org/10.1038/nmat3737\">https://doi.org/10.1038/nmat3737</a>.","apa":"Ottakam Thotiyl, M. M., Freunberger, S. A., Peng, Z., Chen, Y., Liu, Z., &#38; Bruce, P. G. (2013). A stable cathode for the aprotic Li–O2 battery. <i>Nature Materials</i>. Springer Nature. <a href=\"https://doi.org/10.1038/nmat3737\">https://doi.org/10.1038/nmat3737</a>","ama":"Ottakam Thotiyl MM, Freunberger SA, Peng Z, Chen Y, Liu Z, Bruce PG. A stable cathode for the aprotic Li–O2 battery. <i>Nature Materials</i>. 2013;12(11):1050-1056. doi:<a href=\"https://doi.org/10.1038/nmat3737\">10.1038/nmat3737</a>","mla":"Ottakam Thotiyl, Muhammed M., et al. “A Stable Cathode for the Aprotic Li–O2 Battery.” <i>Nature Materials</i>, vol. 12, no. 11, Springer Nature, 2013, pp. 1050–56, doi:<a href=\"https://doi.org/10.1038/nmat3737\">10.1038/nmat3737</a>.","ista":"Ottakam Thotiyl MM, Freunberger SA, Peng Z, Chen Y, Liu Z, Bruce PG. 2013. A stable cathode for the aprotic Li–O2 battery. Nature Materials. 12(11), 1050–1056.","short":"M.M. Ottakam Thotiyl, S.A. Freunberger, Z. Peng, Y. Chen, Z. Liu, P.G. Bruce, Nature Materials 12 (2013) 1050–1056.","ieee":"M. M. Ottakam Thotiyl, S. A. Freunberger, Z. Peng, Y. Chen, Z. Liu, and P. G. Bruce, “A stable cathode for the aprotic Li–O2 battery,” <i>Nature Materials</i>, vol. 12, no. 11. Springer Nature, pp. 1050–1056, 2013."},"article_processing_charge":"No","page":"1050-1056","date_updated":"2021-01-12T08:12:55Z","fulldoi":"https://doi.org/10.1038/nmat3737","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","title":"A stable cathode for the aprotic Li–O2 battery","_id":"7306","author":[{"full_name":"Ottakam Thotiyl, Muhammed M.","first_name":"Muhammed M.","last_name":"Ottakam Thotiyl"},{"first_name":"Stefan Alexander","last_name":"Freunberger","id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","orcid":"0000-0003-2902-5319","full_name":"Freunberger, Stefan Alexander"},{"last_name":"Peng","first_name":"Zhangquan","full_name":"Peng, Zhangquan"},{"full_name":"Chen, Yuhui","first_name":"Yuhui","last_name":"Chen"},{"first_name":"Zheng","last_name":"Liu","full_name":"Liu, Zheng"},{"full_name":"Bruce, Peter G.","first_name":"Peter G.","last_name":"Bruce"}],"date_created":"2020-01-15T12:18:29Z","status":"public","oa_version":"None","publication_status":"published","type":"journal_article","year":"2013","article_type":"original","quality_controlled":"1","intvolume":"        12","abstract":[{"lang":"eng","text":"Rechargeable lithium–air (O2) batteries are receiving intense interest because their high theoretical specific energy exceeds that of lithium-ion batteries. If the Li–O2 battery is ever to succeed, highly reversible formation/decomposition of Li2O2 must take place at the cathode on cycling. However, carbon, used ubiquitously as the basis of the cathode, decomposes during Li2O2 oxidation on charge and actively promotes electrolyte decomposition on cycling. Replacing carbon with a nanoporous gold cathode, when in contact with a dimethyl sulphoxide-based electrolyte, does seem to demonstrate better stability. However, nanoporous gold is not a suitable cathode; its high mass destroys the key advantage of Li–O2 over Li ion (specific energy), it is too expensive and too difficult to fabricate. Identifying a suitable cathode material for the Li–O2 cell is one of the greatest challenges at present. Here we show that a TiC-based cathode reduces greatly side reactions (arising from the electrolyte and electrode degradation) compared with carbon and exhibits better reversible formation/decomposition of Li2O2 even than nanoporous gold (>98% capacity retention after 100 cycles, compared with 95% for nanoporous gold); it is also four times lighter, of lower cost and easier to fabricate. The stability may originate from the presence of TiO2 (along with some TiOC) on the surface of TiC. In contrast to carbon or nanoporous gold, TiC seems to represent a more viable, stable, cathode for aprotic Li–O2 cells."}],"extern":"1","volume":12,"language":[{"iso":"eng"}],"doi":"10.1038/nmat3737","publication":"Nature Materials","day":"01","issue":"11","publisher":"Springer Nature","month":"09","publication_identifier":{"issn":["1476-1122","1476-4660"]}},{"page":"489-494","article_processing_charge":"No","citation":{"ama":"Chen Y, Freunberger SA, Peng Z, Fontaine O, Bruce PG. Charging a Li–O2 battery using a redox mediator. <i>Nature Chemistry</i>. 2013;5(6):489-494. doi:<a href=\"https://doi.org/10.1038/nchem.1646\">10.1038/nchem.1646</a>","mla":"Chen, Yuhui, et al. “Charging a Li–O2 Battery Using a Redox Mediator.” <i>Nature Chemistry</i>, vol. 5, no. 6, Springer Nature, 2013, pp. 489–94, doi:<a href=\"https://doi.org/10.1038/nchem.1646\">10.1038/nchem.1646</a>.","short":"Y. Chen, S.A. Freunberger, Z. Peng, O. Fontaine, P.G. Bruce, Nature Chemistry 5 (2013) 489–494.","ista":"Chen Y, Freunberger SA, Peng Z, Fontaine O, Bruce PG. 2013. Charging a Li–O2 battery using a redox mediator. Nature Chemistry. 5(6), 489–494.","ieee":"Y. Chen, S. A. Freunberger, Z. Peng, O. Fontaine, and P. G. Bruce, “Charging a Li–O2 battery using a redox mediator,” <i>Nature Chemistry</i>, vol. 5, no. 6. Springer Nature, pp. 489–494, 2013.","chicago":"Chen, Yuhui, Stefan Alexander Freunberger, Zhangquan Peng, Olivier Fontaine, and Peter G. Bruce. “Charging a Li–O2 Battery Using a Redox Mediator.” <i>Nature Chemistry</i>. Springer Nature, 2013. <a href=\"https://doi.org/10.1038/nchem.1646\">https://doi.org/10.1038/nchem.1646</a>.","apa":"Chen, Y., Freunberger, S. A., Peng, Z., Fontaine, O., &#38; Bruce, P. G. (2013). Charging a Li–O2 battery using a redox mediator. <i>Nature Chemistry</i>. Springer Nature. <a href=\"https://doi.org/10.1038/nchem.1646\">https://doi.org/10.1038/nchem.1646</a>"},"date_published":"2013-05-12T00:00:00Z","fulldoi":"https://doi.org/10.1038/nchem.1646","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_updated":"2021-01-12T08:12:56Z","status":"public","date_created":"2020-01-15T12:18:43Z","author":[{"full_name":"Chen, Yuhui","last_name":"Chen","first_name":"Yuhui"},{"last_name":"Freunberger","first_name":"Stefan Alexander","id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","full_name":"Freunberger, Stefan Alexander","orcid":"0000-0003-2902-5319"},{"last_name":"Peng","first_name":"Zhangquan","full_name":"Peng, Zhangquan"},{"full_name":"Fontaine, Olivier","first_name":"Olivier","last_name":"Fontaine"},{"full_name":"Bruce, Peter G.","first_name":"Peter G.","last_name":"Bruce"}],"_id":"7307","title":"Charging a Li–O2 battery using a redox mediator","abstract":[{"text":"The non-aqueous Li–air (O2) battery is receiving intense interest because its theoretical specific energy exceeds that of Li-ion batteries. Recharging the Li–O2 battery depends on oxidizing solid lithium peroxide (Li2O2), which is formed on discharge within the porous cathode. However, transporting charge between Li2O2 particles and the solid electrode surface is at best very difficult and leads to voltage polarization on charging, even at modest rates. This is a significant problem facing the non-aqueous Li–O2 battery. Here we show that incorporation of a redox mediator, tetrathiafulvalene (TTF), enables recharging at rates that are impossible for the cell in the absence of the mediator. On charging, TTF is oxidized to TTF+ at the cathode surface; TTF+ in turn oxidizes the solid Li2O2, which results in the regeneration of TTF. The mediator acts as an electron–hole transfer agent that permits efficient oxidation of solid Li2O2. The cell with the mediator demonstrated 100 charge/discharge cycles.","lang":"eng"}],"intvolume":"         5","extern":"1","quality_controlled":"1","year":"2013","article_type":"original","oa_version":"None","publication_status":"published","type":"journal_article","doi":"10.1038/nchem.1646","language":[{"iso":"eng"}],"volume":5,"issue":"6","publication":"Nature Chemistry","day":"12","month":"05","publication_identifier":{"issn":["1755-4330","1755-4349"]},"publisher":"Springer Nature"},{"article_processing_charge":"No","date_published":"2013-04-01T00:00:00Z","fulldoi":"https://doi.org/10.1007/s10703-012-0170-4","intvolume":"        42","publication_status":"published","year":"2013","quality_controlled":"1","isi":1,"doi":"10.1007/s10703-012-0170-4","volume":42,"day":"01","publisher":"Springer","month":"04","department":[{"_id":"KrCh"}],"external_id":{"isi":["000316677500002"]},"page":"142 - 174","citation":{"apa":"Chatterjee, K., De Alfaro, L., Faella, M., Majumdar, R., &#38; Raman, V. (2013). Code aware resource management. <i>Formal Methods in System Design</i>. Springer. <a href=\"https://doi.org/10.1007/s10703-012-0170-4\">https://doi.org/10.1007/s10703-012-0170-4</a>","chicago":"Chatterjee, Krishnendu, Luca De Alfaro, Marco Faella, Ritankar Majumdar, and Vishwanath Raman. “Code Aware Resource Management.” <i>Formal Methods in System Design</i>. Springer, 2013. <a href=\"https://doi.org/10.1007/s10703-012-0170-4\">https://doi.org/10.1007/s10703-012-0170-4</a>.","short":"K. Chatterjee, L. De Alfaro, M. Faella, R. Majumdar, V. Raman, Formal Methods in System Design 42 (2013) 142–174.","ieee":"K. Chatterjee, L. De Alfaro, M. Faella, R. Majumdar, and V. Raman, “Code aware resource management,” <i>Formal Methods in System Design</i>, vol. 42, no. 2. Springer, pp. 142–174, 2013.","ista":"Chatterjee K, De Alfaro L, Faella M, Majumdar R, Raman V. 2013. Code aware resource management. Formal Methods in System Design. 42(2), 142–174.","mla":"Chatterjee, Krishnendu, et al. “Code Aware Resource Management.” <i>Formal Methods in System Design</i>, vol. 42, no. 2, Springer, 2013, pp. 142–74, doi:<a href=\"https://doi.org/10.1007/s10703-012-0170-4\">10.1007/s10703-012-0170-4</a>.","ama":"Chatterjee K, De Alfaro L, Faella M, Majumdar R, Raman V. Code aware resource management. <i>Formal Methods in System Design</i>. 2013;42(2):142-174. doi:<a href=\"https://doi.org/10.1007/s10703-012-0170-4\">10.1007/s10703-012-0170-4</a>"},"date_updated":"2025-09-29T13:24:54Z","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","author":[{"id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","first_name":"Krishnendu","last_name":"Chatterjee","full_name":"Chatterjee, Krishnendu","orcid":"0000-0002-4561-241X"},{"full_name":"De Alfaro, Luca","last_name":"De Alfaro","first_name":"Luca"},{"last_name":"Faella","first_name":"Marco","full_name":"Faella, Marco"},{"first_name":"Ritankar","last_name":"Majumdar","full_name":"Majumdar, Ritankar"},{"full_name":"Raman, Vishwanath","first_name":"Vishwanath","last_name":"Raman"}],"status":"public","date_created":"2018-12-11T12:01:29Z","title":"Code aware resource management","_id":"3116","abstract":[{"text":"Multithreaded programs coordinate their interaction through synchronization primitives like mutexes and semaphores, which are managed by an OS-provided resource manager. We propose algorithms for the automatic construction of code-aware resource managers for multithreaded embedded applications. Such managers use knowledge about the structure and resource usage (mutex and semaphore usage) of the threads to guarantee deadlock freedom and progress while managing resources in an efficient way. Our algorithms compute managers as winning strategies in certain infinite games, and produce a compact code description of these strategies. We have implemented the algorithms in the tool Cynthesis. Given a multithreaded program in C, the tool produces C code implementing a code-aware resource manager. We show in experiments that Cynthesis produces compact resource managers within a few minutes on a set of embedded benchmarks with up to 6 threads. © 2012 Springer Science+Business Media, LLC.","lang":"eng"}],"type":"journal_article","oa_version":"None","language":[{"iso":"eng"}],"publist_id":"3583","scopus_import":"1","issue":"2","publication":"Formal Methods in System Design","acknowledgement":"This research was supported in part by the National Science Foundation CAREER award CCR-0132780, by the ONR grant N00014-02-1-0671, by the National Science Foundation grants CCR-0427202 and CCR-0234690, and by the ARP award TO.030.MM.D."}]