[{"language":[{"iso":"eng"}],"publisher":"IEEE","month":"11","author":[{"full_name":"Devir, Yohai S.","last_name":"Devir","first_name":"Yohai S."},{"first_name":"Guy","last_name":"Rosman","full_name":"Rosman, Guy"},{"last_name":"Bronstein","first_name":"Alexander","id":"58f3726e-7cba-11ef-ad8b-e6e8cb3904e6","full_name":"Bronstein, Alexander","orcid":"0000-0001-9699-8730"},{"full_name":"Bronstein, Michael M.","first_name":"Michael M.","last_name":"Bronstein"},{"first_name":"Ron","last_name":"Kimmel","full_name":"Kimmel, Ron"}],"publication":"12th International Conference on Computer Vision Workshops","abstract":[{"text":"Shape-from-X is a generic type of inverse problems in computer vision, in which a shape is reconstructed from some measurements. A specially challenging setting of this problem is the case in which the reconstructed shapes are non-rigid. In this paper, we propose a framework for intrinsic regularization of such problems. The assumption is that we have the geometric structure of a shape which is intrinsically (up to bending) similar to the one we would like to reconstruct. For that goal, we formulate a variation with respect to vertex coordinates of a triangulated mesh approximating the continuous shape. The numerical core of the proposed method is based on differentiating the fast marching update step for geodesic distance computation.","lang":"eng"}],"extern":"1","article_processing_charge":"No","quality_controlled":"1","conference":{"name":"ICCV: International Conference on Computer Vision","end_date":"2009-10-04","start_date":"2009-09-27","location":"Kyoto, Japan"},"date_published":"2009-11-01T00:00:00Z","citation":{"short":"Y.S. Devir, G. Rosman, A.M. Bronstein, M.M. Bronstein, R. Kimmel, in:, 12th International Conference on Computer Vision Workshops, IEEE, 2009.","ista":"Devir YS, Rosman G, Bronstein AM, Bronstein MM, Kimmel R. 2009. On reconstruction of non-rigid shapes with intrinsic regularization. 12th International Conference on Computer Vision Workshops. ICCV: International Conference on Computer Vision.","apa":"Devir, Y. S., Rosman, G., Bronstein, A. M., Bronstein, M. M., &#38; Kimmel, R. (2009). On reconstruction of non-rigid shapes with intrinsic regularization. In <i>12th International Conference on Computer Vision Workshops</i>. Kyoto, Japan: IEEE. <a href=\"https://doi.org/10.1109/iccvw.2009.5457688\">https://doi.org/10.1109/iccvw.2009.5457688</a>","mla":"Devir, Yohai S., et al. “On Reconstruction of Non-Rigid Shapes with Intrinsic Regularization.” <i>12th International Conference on Computer Vision Workshops</i>, IEEE, 2009, doi:<a href=\"https://doi.org/10.1109/iccvw.2009.5457688\">10.1109/iccvw.2009.5457688</a>.","ama":"Devir YS, Rosman G, Bronstein AM, Bronstein MM, Kimmel R. On reconstruction of non-rigid shapes with intrinsic regularization. In: <i>12th International Conference on Computer Vision Workshops</i>. IEEE; 2009. doi:<a href=\"https://doi.org/10.1109/iccvw.2009.5457688\">10.1109/iccvw.2009.5457688</a>","ieee":"Y. S. Devir, G. Rosman, A. M. Bronstein, M. M. Bronstein, and R. Kimmel, “On reconstruction of non-rigid shapes with intrinsic regularization,” in <i>12th International Conference on Computer Vision Workshops</i>, Kyoto, Japan, 2009.","chicago":"Devir, Yohai S., Guy Rosman, Alex M. Bronstein, Michael M. Bronstein, and Ron Kimmel. “On Reconstruction of Non-Rigid Shapes with Intrinsic Regularization.” In <i>12th International Conference on Computer Vision Workshops</i>. IEEE, 2009. <a href=\"https://doi.org/10.1109/iccvw.2009.5457688\">https://doi.org/10.1109/iccvw.2009.5457688</a>."},"_id":"18393","oa_version":"None","year":"2009","day":"01","type":"conference","publication_status":"published","status":"public","date_created":"2024-10-15T11:20:54Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","doi":"10.1109/iccvw.2009.5457688","scopus_import":"1","publication_identifier":{"isbn":["9781424444427"]},"date_updated":"2024-11-18T10:29:12Z","title":"On reconstruction of non-rigid shapes with intrinsic regularization"},{"publication":"IPSJ Transactions on Computer Vision and Applications","author":[{"id":"58f3726e-7cba-11ef-ad8b-e6e8cb3904e6","orcid":"0000-0001-9699-8730","full_name":"Bronstein, Alexander","last_name":"Bronstein","first_name":"Alexander"},{"first_name":"Michael M.","last_name":"Bronstein","full_name":"Bronstein, Michael M."},{"first_name":"Yair","last_name":"Carmon","full_name":"Carmon, Yair"},{"full_name":"Kimmel, Ron","last_name":"Kimmel","first_name":"Ron"}],"quality_controlled":"1","extern":"1","article_processing_charge":"No","abstract":[{"lang":"eng","text":"Partial matching of geometric structures is important in computer vision, pattern recognition and shape analysis applications. The problem consists of matching similar parts of shapes that may be dissimilar as a whole. Recently, it was proposed to consider partial similarity as a multi-criterion optimization problem trying to simultaneously maximize the similarity and the significance of the matching parts. A major challenge in that framework is providing a quantitative measure of the significance of a part of an object. Here, we define the significance of a part of a shape by its discriminative power with respect do a given shape database — that is, the uniqueness of the part. We define a point-wise significance density using a statistical weighting approach similar to the term frequency-inverse document frequency (tf-idf) weighting employed in search engines. The significance measure of a given part is obtained by integrating over this density. Numerical experiments show that the proposed approach produces intuitive significant parts, and demonstrate an improvement in the performance of partial matching between shapes. "}],"publisher":"Information Processing Society of Japan","language":[{"iso":"eng"}],"month":"03","intvolume":"         1","_id":"18438","oa_version":"Published Version","page":"105-114","citation":{"ama":"Bronstein AM, Bronstein MM, Carmon Y, Kimmel R. Partial similarity of shapes using a statistical significance measure. <i>IPSJ Transactions on Computer Vision and Applications</i>. 2009;1:105-114. doi:<a href=\"https://doi.org/10.2197/ipsjtcva.1.105\">10.2197/ipsjtcva.1.105</a>","ieee":"A. M. Bronstein, M. M. Bronstein, Y. Carmon, and R. Kimmel, “Partial similarity of shapes using a statistical significance measure,” <i>IPSJ Transactions on Computer Vision and Applications</i>, vol. 1. Information Processing Society of Japan, pp. 105–114, 2009.","chicago":"Bronstein, Alex M., Michael M. Bronstein, Yair Carmon, and Ron Kimmel. “Partial Similarity of Shapes Using a Statistical Significance Measure.” <i>IPSJ Transactions on Computer Vision and Applications</i>. Information Processing Society of Japan, 2009. <a href=\"https://doi.org/10.2197/ipsjtcva.1.105\">https://doi.org/10.2197/ipsjtcva.1.105</a>.","mla":"Bronstein, Alex M., et al. “Partial Similarity of Shapes Using a Statistical Significance Measure.” <i>IPSJ Transactions on Computer Vision and Applications</i>, vol. 1, Information Processing Society of Japan, 2009, pp. 105–14, doi:<a href=\"https://doi.org/10.2197/ipsjtcva.1.105\">10.2197/ipsjtcva.1.105</a>.","ista":"Bronstein AM, Bronstein MM, Carmon Y, Kimmel R. 2009. Partial similarity of shapes using a statistical significance measure. IPSJ Transactions on Computer Vision and Applications. 1, 105–114.","apa":"Bronstein, A. M., Bronstein, M. M., Carmon, Y., &#38; Kimmel, R. (2009). Partial similarity of shapes using a statistical significance measure. <i>IPSJ Transactions on Computer Vision and Applications</i>. Information Processing Society of Japan. <a href=\"https://doi.org/10.2197/ipsjtcva.1.105\">https://doi.org/10.2197/ipsjtcva.1.105</a>","short":"A.M. Bronstein, M.M. Bronstein, Y. Carmon, R. Kimmel, IPSJ Transactions on Computer Vision and Applications 1 (2009) 105–114."},"oa":1,"date_published":"2009-03-31T00:00:00Z","status":"public","main_file_link":[{"url":"https://doi.org/10.2197/ipsjtcva.1.105","open_access":"1"}],"user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","doi":"10.2197/ipsjtcva.1.105","date_created":"2024-10-15T11:20:55Z","volume":1,"year":"2009","publication_status":"published","type":"journal_article","day":"31","date_updated":"2024-12-18T16:01:54Z","title":"Partial similarity of shapes using a statistical significance measure","publication_identifier":{"eissn":["1882-6695"]},"scopus_import":"1"},{"citation":{"short":"Z. Haiman, in:, Astrophysics and Space Science Proceedings, Springer Nature, Dordrecht, 2009, pp. 385–418.","ista":"Haiman Z. 2009. Observing the first stars and black holes. Astrophysics and Space Science Proceedings. , Astrophysics and Space Science Proceedings, , 385–418.","apa":"Haiman, Z. (2009). Observing the first stars and black holes. In <i>Astrophysics and Space Science Proceedings</i> (pp. 385–418). Dordrecht: Springer Nature. <a href=\"https://doi.org/10.1007/978-1-4020-9457-6_15\">https://doi.org/10.1007/978-1-4020-9457-6_15</a>","mla":"Haiman, Zoltán. “Observing the First Stars and Black Holes.” <i>Astrophysics and Space Science Proceedings</i>, Springer Nature, 2009, pp. 385–418, doi:<a href=\"https://doi.org/10.1007/978-1-4020-9457-6_15\">10.1007/978-1-4020-9457-6_15</a>.","ieee":"Z. Haiman, “Observing the first stars and black holes,” in <i>Astrophysics and Space Science Proceedings</i>, 2009, pp. 385–418.","chicago":"Haiman, Zoltán. “Observing the First Stars and Black Holes.” In <i>Astrophysics and Space Science Proceedings</i>, 385–418. Dordrecht: Springer Nature, 2009. <a href=\"https://doi.org/10.1007/978-1-4020-9457-6_15\">https://doi.org/10.1007/978-1-4020-9457-6_15</a>.","ama":"Haiman Z. Observing the first stars and black holes. In: <i>Astrophysics and Space Science Proceedings</i>. Dordrecht: Springer Nature; 2009:385-418. doi:<a href=\"https://doi.org/10.1007/978-1-4020-9457-6_15\">10.1007/978-1-4020-9457-6_15</a>"},"date_published":"2009-01-01T00:00:00Z","month":"01","publisher":"Springer Nature","OA_place":"repository","language":[{"iso":"eng"}],"quality_controlled":"1","article_processing_charge":"No","publication":"Astrophysics and Space Science Proceedings","publication_identifier":{"eissn":["1570-6605"],"isbn":["9781402094569"],"eisbn":["9781402094576"],"issn":["1570-6591"]},"scopus_import":"1","title":"Observing the first stars and black holes","OA_type":"green","place":"Dordrecht","day":"01","type":"conference","arxiv":1,"main_file_link":[{"url":"https://arxiv.org/abs/0809.3926","open_access":"1"}],"doi":"10.1007/978-1-4020-9457-6_15","date_created":"2025-01-03T12:09:18Z","status":"public","oa":1,"page":"385-418","oa_version":"Preprint","_id":"18726","abstract":[{"text":"The high sensitivity of JWST will open a new window on the end of the cosmological dark ages. Small stellar clusters, with a stellar mass of several × 106 M⊙, and low-mass black holes (BHs), with a mass of several $× 105 M⊙ should be directly detectable out to redshift z = 10, and individual supernovae (SNe) and gamma ray burst GRB afterglows are bright enough to be visible beyond this redshift. Dense primordial gas, in the process of collapsing from large scales to form protogalaxies, may also be possible to image through diffuse recombination line emission, possibly even before stars or BHs are formed. In this article, I discuss the key physical processes that are expected to have determined the sizes of the first star–clusters and black holes, and the prospect of studying these objects by direct detections with JWST and with other instruments. The direct light emitted by the very first stellar clusters and intermediate-mass black holes at z > 10 will likely fall below JWST’s detection threshold. However, JWST could reveal a decline at the faint-end of the high-redshift luminosity function, and thereby shed light on radiative and other feedback effects that operate at these early epochs. JWST will also have the sensitivity to detect individual SNe from beyond z = 10. In a dedicated survey lasting for several weeks, thousands of SNe could be detected at z > 6, with a redshift distribution extending to the formation of the very first stars at z ≳ 15. Using these SNe as tracers may be the only method to map out the earliest stages of the cosmic star–formation history. Finally, we point out that studying the earliest objects at high redshift will also offer a new window on the primordial power spectrum, on ∼100 times smaller scales than probed by current large-scale structure data.","lang":"eng"}],"extern":"1","external_id":{"arxiv":["0809.3926"]},"author":[{"first_name":"Zoltán","last_name":"Haiman","full_name":"Haiman, Zoltán","orcid":"0000-0003-3633-5403","id":"7c006e8c-cc0d-11ee-8322-cb904ef76f36"}],"alternative_title":["Astrophysics and Space Science Proceedings"],"date_updated":"2025-01-03T12:14:49Z","publication_status":"published","year":"2009","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"},{"abstract":[{"text":"The high sensitivity of JWST will open a new window on the end of the cosmological dark ages. Small stellar clusters, with a stellar mass of several × 106 M⊙, and low-mass black holes (BHs), with a mass of several $× 105 M⊙ should be directly detectable out to redshift z = 10, and individual supernovae (SNe) and gamma ray burst GRB afterglows are bright enough to be visible beyond this redshift. Dense primordial gas, in the process of collapsing from large scales to form protogalaxies, may also be possible to image through diffuse recombination line emission, possibly even before stars or BHs are formed. In this article, I discuss the key physical processes that are expected to have determined the sizes of the first star–clusters and black holes, and the prospect of studying these objects by direct detections with JWST and with other instruments. The direct light emitted by the very first stellar clusters and intermediate-mass black holes at z > 10 will likely fall below JWST’s detection threshold. However, JWST could reveal a decline at the faint-end of the high-redshift luminosity function, and thereby shed light on radiative and other feedback effects that operate at these early epochs. JWST will also have the sensitivity to detect individual SNe from beyond z = 10. In a dedicated survey lasting for several weeks, thousands of SNe could be detected at z > 6, with a redshift distribution extending to the formation of the very first stars at z ≳ 15. Using these SNe as tracers may be the only method to map out the earliest stages of the cosmic star–formation history. Finally, we point out that studying the earliest objects at high redshift will also offer a new window on the primordial power spectrum, on ∼100 times smaller scales than probed by current large-scale structure data.","lang":"eng"}],"extern":"1","author":[{"last_name":"Haiman","first_name":"Zoltán","id":"7c006e8c-cc0d-11ee-8322-cb904ef76f36","orcid":"0000-0003-3633-5403","full_name":"Haiman, Zoltán"}],"external_id":{"arxiv":["0809.3926"]},"oa_version":"Preprint","_id":"18735","oa":1,"page":"385-418","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_status":"published","year":"2009","date_updated":"2025-01-07T12:52:13Z","alternative_title":["Astrophysics and Space Science Proceedings"],"article_processing_charge":"No","quality_controlled":"1","publication":"Astrophysics in the Next Decade","month":"02","language":[{"iso":"eng"}],"publisher":"Springer Nature","OA_place":"repository","date_published":"2009-02-11T00:00:00Z","citation":{"ista":"Haiman Z. 2009.Observing the First Stars and Black Holes. In: Astrophysics in the Next Decade. Astrophysics and Space Science Proceedings, , 385–418.","apa":"Haiman, Z. (2009). Observing the First Stars and Black Holes. In H. A. Thronson, M. Stiavelli, &#38; A. Tielens (Eds.), <i>Astrophysics in the Next Decade</i> (pp. 385–418). Springer Nature. <a href=\"https://doi.org/10.1007/978-1-4020-9457-6_15\">https://doi.org/10.1007/978-1-4020-9457-6_15</a>","short":"Z. Haiman, in:, H.A. Thronson, M. Stiavelli, A. Tielens (Eds.), Astrophysics in the Next Decade, Springer Nature, 2009, pp. 385–418.","ama":"Haiman Z. Observing the First Stars and Black Holes. In: Thronson HA, Stiavelli M, Tielens A, eds. <i>Astrophysics in the Next Decade</i>. Springer Nature; 2009:385-418. doi:<a href=\"https://doi.org/10.1007/978-1-4020-9457-6_15\">10.1007/978-1-4020-9457-6_15</a>","chicago":"Haiman, Zoltán. “Observing the First Stars and Black Holes.” In <i>Astrophysics in the Next Decade</i>, edited by Harley A. Thronson, Massimo Stiavelli, and Alexander Tielens, 385–418. Springer Nature, 2009. <a href=\"https://doi.org/10.1007/978-1-4020-9457-6_15\">https://doi.org/10.1007/978-1-4020-9457-6_15</a>.","ieee":"Z. Haiman, “Observing the First Stars and Black Holes,” in <i>Astrophysics in the Next Decade</i>, H. A. Thronson, M. Stiavelli, and A. Tielens, Eds. Springer Nature, 2009, pp. 385–418.","mla":"Haiman, Zoltán. “Observing the First Stars and Black Holes.” <i>Astrophysics in the Next Decade</i>, edited by Harley A. Thronson et al., Springer Nature, 2009, pp. 385–418, doi:<a href=\"https://doi.org/10.1007/978-1-4020-9457-6_15\">10.1007/978-1-4020-9457-6_15</a>."},"arxiv":1,"doi":"10.1007/978-1-4020-9457-6_15","date_created":"2025-01-03T12:29:16Z","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/0809.3926"}],"status":"public","day":"11","type":"book_chapter","OA_type":"green","title":"Observing the First Stars and Black Holes","scopus_import":"1","publication_identifier":{"eisbn":["9781402094576"],"eissn":["1570-6605"],"isbn":["9781402094569"],"issn":["1570-6591"]},"editor":[{"full_name":"Thronson, Harley A.","last_name":"Thronson","first_name":"Harley A."},{"first_name":"Massimo","last_name":"Stiavelli","full_name":"Stiavelli, Massimo"},{"full_name":"Tielens, Alexander","first_name":"Alexander","last_name":"Tielens"}]},{"status":"public","date_created":"2018-12-11T11:55:31Z","doi":"10.1534/genetics.108.098004","acknowledgement":"This work was funded by a Portuguese Foundation for Science and Technology scholarship to B.V., and B.C. was supported by the Royal Society","volume":181,"year":"2009","publication_status":"published","type":"journal_article","day":"01","date_updated":"2021-01-12T06:55:06Z","title":"Recombination rates may affect the ratio of X to autosomal noncoding polymorphism in African populations of Drosophila melanogaster","issue":"4","publist_id":"4971","publication":"Genetics","author":[{"first_name":"Beatriz","last_name":"Vicoso","full_name":"Beatriz Vicoso","orcid":"0000-0002-4579-8306","id":"49E1C5C6-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Charlesworth, Brian","last_name":"Charlesworth","first_name":"Brian"}],"quality_controlled":0,"extern":1,"publisher":"Genetics Society of America","month":"04","intvolume":"       181","_id":"2067","page":"1699 - 1701","citation":{"mla":"Vicoso, Beatriz, and Brian Charlesworth. “Recombination Rates May Affect the Ratio of X to Autosomal Noncoding Polymorphism in African Populations of Drosophila Melanogaster.” <i>Genetics</i>, vol. 181, no. 4, Genetics Society of America, 2009, pp. 1699–701, doi:<a href=\"https://doi.org/10.1534/genetics.108.098004\">10.1534/genetics.108.098004</a>.","ama":"Vicoso B, Charlesworth B. Recombination rates may affect the ratio of X to autosomal noncoding polymorphism in African populations of Drosophila melanogaster. <i>Genetics</i>. 2009;181(4):1699-1701. doi:<a href=\"https://doi.org/10.1534/genetics.108.098004\">10.1534/genetics.108.098004</a>","chicago":"Vicoso, Beatriz, and Brian Charlesworth. “Recombination Rates May Affect the Ratio of X to Autosomal Noncoding Polymorphism in African Populations of Drosophila Melanogaster.” <i>Genetics</i>. Genetics Society of America, 2009. <a href=\"https://doi.org/10.1534/genetics.108.098004\">https://doi.org/10.1534/genetics.108.098004</a>.","ieee":"B. Vicoso and B. Charlesworth, “Recombination rates may affect the ratio of X to autosomal noncoding polymorphism in African populations of Drosophila melanogaster,” <i>Genetics</i>, vol. 181, no. 4. Genetics Society of America, pp. 1699–1701, 2009.","short":"B. Vicoso, B. Charlesworth, Genetics 181 (2009) 1699–1701.","ista":"Vicoso B, Charlesworth B. 2009. Recombination rates may affect the ratio of X to autosomal noncoding polymorphism in African populations of Drosophila melanogaster. Genetics. 181(4), 1699–1701.","apa":"Vicoso, B., &#38; Charlesworth, B. (2009). Recombination rates may affect the ratio of X to autosomal noncoding polymorphism in African populations of Drosophila melanogaster. <i>Genetics</i>. Genetics Society of America. <a href=\"https://doi.org/10.1534/genetics.108.098004\">https://doi.org/10.1534/genetics.108.098004</a>"},"date_published":"2009-04-01T00:00:00Z"},{"citation":{"short":"B. Vicoso, B. Charlesworth, Journal of Molecular Evolution 68 (2009) 576–583.","apa":"Vicoso, B., &#38; Charlesworth, B. (2009). The deficit of male-biased genes on the D. melanogaster X chromosome is expression-dependent: A consequence of dosage compensation? <i>Journal of Molecular Evolution</i>. Springer. <a href=\"https://doi.org/10.1007/s00239-009-9235-4\">https://doi.org/10.1007/s00239-009-9235-4</a>","ista":"Vicoso B, Charlesworth B. 2009. The deficit of male-biased genes on the D. melanogaster X chromosome is expression-dependent: A consequence of dosage compensation? Journal of Molecular Evolution. 68(5), 576–583.","mla":"Vicoso, Beatriz, and Brian Charlesworth. “The Deficit of Male-Biased Genes on the D. Melanogaster X Chromosome Is Expression-Dependent: A Consequence of Dosage Compensation?” <i>Journal of Molecular Evolution</i>, vol. 68, no. 5, Springer, 2009, pp. 576–83, doi:<a href=\"https://doi.org/10.1007/s00239-009-9235-4\">10.1007/s00239-009-9235-4</a>.","ama":"Vicoso B, Charlesworth B. The deficit of male-biased genes on the D. melanogaster X chromosome is expression-dependent: A consequence of dosage compensation? <i>Journal of Molecular Evolution</i>. 2009;68(5):576-583. doi:<a href=\"https://doi.org/10.1007/s00239-009-9235-4\">10.1007/s00239-009-9235-4</a>","ieee":"B. Vicoso and B. Charlesworth, “The deficit of male-biased genes on the D. melanogaster X chromosome is expression-dependent: A consequence of dosage compensation?,” <i>Journal of Molecular Evolution</i>, vol. 68, no. 5. Springer, pp. 576–583, 2009.","chicago":"Vicoso, Beatriz, and Brian Charlesworth. “The Deficit of Male-Biased Genes on the D. Melanogaster X Chromosome Is Expression-Dependent: A Consequence of Dosage Compensation?” <i>Journal of Molecular Evolution</i>. Springer, 2009. <a href=\"https://doi.org/10.1007/s00239-009-9235-4\">https://doi.org/10.1007/s00239-009-9235-4</a>."},"date_published":"2009-05-01T00:00:00Z","page":"576 - 583","_id":"2068","intvolume":"        68","month":"05","publisher":"Springer","quality_controlled":0,"abstract":[{"lang":"eng","text":"In Drosophila, there is a consistent deficit of male-biased genes on the X chromosome. It has been suggested that male-biased genes may evolve from initially unbiased genes as a result of increased expression levels in males. If transcription rates are limited, a large increase in expression in the testis may be harder to achieve for single-copy X-linked genes than for autosomal genes, because they are already hypertranscribed due to dosage compensation. This hypothesis predicts that the larger the increase in expression required to make a male-biased gene, the lower the chance of this being achievable if it is located on the X chromosome. Consequently, highly expressed male-biased genes should be located on the X chromosome less often than lowly expressed male-biased genes. This pattern is observed in our analysis of publicly available data, where microarray data or EST data are used to detect male-biased genes in D. melanogaster and to measure their expression levels. This is consistent with the idea that limitations in transcription rates may prevent male-biased genes from accumulating on the X chromosome."}],"extern":1,"publication":"Journal of Molecular Evolution","author":[{"orcid":"0000-0002-4579-8306","full_name":"Beatriz Vicoso","id":"49E1C5C6-F248-11E8-B48F-1D18A9856A87","first_name":"Beatriz","last_name":"Vicoso"},{"full_name":"Charlesworth, Brian","first_name":"Brian","last_name":"Charlesworth"}],"publist_id":"4970","issue":"5","title":"The deficit of male-biased genes on the D. melanogaster X chromosome is expression-dependent: A consequence of dosage compensation?","date_updated":"2021-01-12T06:55:06Z","publication_status":"published","day":"01","type":"journal_article","acknowledgement":"This work was funded by a Portuguese Foundation for Science and Technology scholarship to B.V., and B.C. was supported by the Royal Society","year":"2009","volume":68,"doi":"10.1007/s00239-009-9235-4","date_created":"2018-12-11T11:55:31Z","status":"public"},{"date_created":"2018-12-11T11:55:32Z","doi":"10.1111/j.1558-5646.2009.00719.x","status":"public","day":"01","type":"journal_article","publication_status":"published","year":"2009","volume":63,"acknowledgement":"This work was funded by a Portuguese Foundation for Science and Technology scholarship to BV, and BC was supported by the Royal Society","title":"Effective population size and the faster-X effect: An extended model","issue":"9","date_updated":"2021-01-12T06:55:06Z","publist_id":"4968","extern":1,"abstract":[{"lang":"eng","text":"Current models of X-linked and autosomal evolutionary rates often assume that the effective population size of the X chromosome (NeX) is equal to three-quarters of the autosomal population size (NeA). However, polymorphism studies of Drosophila melanogaster and D. simulans suggest that there are often significant deviations from this value. We have computed fixation rates of beneficial and deleterious mutations at X-linked and autosomal sites when this occurs. We find that NeX/NeA is a crucial parameter for the rates of evolution of X-linked sites compared to autosomal sites. Faster-X evolution due to the fixation of beneficial mutations can occur under a much wider range of levels of dominance when NeX/N eA &gt; 3/4. We also examined various parameters that are known to influence the rates of evolution at X-linked and autosomal sites, such as different mutation rates in males and females and mutations that are sexually antagonistic, to determine which cases can lead to faster-X evolution. We show that, when the rate of nonsynonymous evolution is normalized by the rate of neutral evolution, a sex difference in mutation rate has no influence on the conditions for faster-X evolution."}],"quality_controlled":0,"author":[{"last_name":"Vicoso","first_name":"Beatriz","id":"49E1C5C6-F248-11E8-B48F-1D18A9856A87","full_name":"Beatriz Vicoso","orcid":"0000-0002-4579-8306"},{"full_name":"Charlesworth, Brian","first_name":"Brian","last_name":"Charlesworth"}],"publication":"Evolution","month":"09","publisher":"Wiley-Blackwell","intvolume":"        63","_id":"2069","date_published":"2009-09-01T00:00:00Z","citation":{"mla":"Vicoso, Beatriz, and Brian Charlesworth. “Effective Population Size and the Faster-X Effect: An Extended Model.” <i>Evolution</i>, vol. 63, no. 9, Wiley-Blackwell, 2009, pp. 2413–26, doi:<a href=\"https://doi.org/10.1111/j.1558-5646.2009.00719.x\">10.1111/j.1558-5646.2009.00719.x</a>.","ama":"Vicoso B, Charlesworth B. Effective population size and the faster-X effect: An extended model. <i>Evolution</i>. 2009;63(9):2413-2426. doi:<a href=\"https://doi.org/10.1111/j.1558-5646.2009.00719.x\">10.1111/j.1558-5646.2009.00719.x</a>","ieee":"B. Vicoso and B. Charlesworth, “Effective population size and the faster-X effect: An extended model,” <i>Evolution</i>, vol. 63, no. 9. Wiley-Blackwell, pp. 2413–2426, 2009.","chicago":"Vicoso, Beatriz, and Brian Charlesworth. “Effective Population Size and the Faster-X Effect: An Extended Model.” <i>Evolution</i>. Wiley-Blackwell, 2009. <a href=\"https://doi.org/10.1111/j.1558-5646.2009.00719.x\">https://doi.org/10.1111/j.1558-5646.2009.00719.x</a>.","short":"B. Vicoso, B. Charlesworth, Evolution 63 (2009) 2413–2426.","apa":"Vicoso, B., &#38; Charlesworth, B. (2009). Effective population size and the faster-X effect: An extended model. <i>Evolution</i>. Wiley-Blackwell. <a href=\"https://doi.org/10.1111/j.1558-5646.2009.00719.x\">https://doi.org/10.1111/j.1558-5646.2009.00719.x</a>","ista":"Vicoso B, Charlesworth B. 2009. Effective population size and the faster-X effect: An extended model. Evolution. 63(9), 2413–2426."},"page":"2413 - 2426"},{"publication_status":"published","day":"01","type":"journal_article","year":"2009","volume":17,"acknowledgement":"This research is funded by NIH Grant GM076007 and a Sloan Research Fellowship and a David and Lucile Packard Fellowship to D.B.","date_created":"2018-12-11T11:55:32Z","doi":"10.1007/s10577-009-9053-y","status":"public","publist_id":"4969","issue":"5","title":"Progress and prospects toward our understanding of the evolution of dosage compensation","date_updated":"2021-01-12T06:55:07Z","month":"07","publisher":"Springer","quality_controlled":0,"abstract":[{"text":"In many eukaryotic organisms, gender is determined by a pair of heteromorphic sex chromosomes. Degeneration of the non-recombining Y chromosome is a general facet of sex chromosome evolution. Selective pressure to restore expression levels of X-linked genes relative to autosomes accompanies Y-chromosome degeneration, thus driving the evolution of dosage compensation mechanisms. This review focuses on evolutionary aspects of dosage compensation, in light of recent advances in comparative and functional genomics that have substantially increased our understanding of the molecular mechanisms of dosage compensation and how it evolved. We review processes involved in sex chromosome evolution, and discuss the dynamic interaction between Y degeneration and the acquisition of dosage compensation. We compare mechanisms of dosage compensation and the origin of dosage compensation genes between different taxa and comment on sex chromosomes that apparently lack compensation mechanisms. Finally, we discuss how dosage compensation systems can also influence the evolution of well-established sex chromosomes.","lang":"eng"}],"extern":1,"publication":"Chromosome Research","author":[{"full_name":"Beatriz Vicoso","orcid":"0000-0002-4579-8306","id":"49E1C5C6-F248-11E8-B48F-1D18A9856A87","first_name":"Beatriz","last_name":"Vicoso"},{"first_name":"Doris","last_name":"Bachtrog","full_name":"Bachtrog, Doris"}],"citation":{"ista":"Vicoso B, Bachtrog D. 2009. Progress and prospects toward our understanding of the evolution of dosage compensation. Chromosome Research. 17(5), 585–602.","apa":"Vicoso, B., &#38; Bachtrog, D. (2009). Progress and prospects toward our understanding of the evolution of dosage compensation. <i>Chromosome Research</i>. Springer. <a href=\"https://doi.org/10.1007/s10577-009-9053-y\">https://doi.org/10.1007/s10577-009-9053-y</a>","short":"B. Vicoso, D. Bachtrog, Chromosome Research 17 (2009) 585–602.","ama":"Vicoso B, Bachtrog D. Progress and prospects toward our understanding of the evolution of dosage compensation. <i>Chromosome Research</i>. 2009;17(5):585-602. doi:<a href=\"https://doi.org/10.1007/s10577-009-9053-y\">10.1007/s10577-009-9053-y</a>","ieee":"B. Vicoso and D. Bachtrog, “Progress and prospects toward our understanding of the evolution of dosage compensation,” <i>Chromosome Research</i>, vol. 17, no. 5. Springer, pp. 585–602, 2009.","chicago":"Vicoso, Beatriz, and Doris Bachtrog. “Progress and Prospects toward Our Understanding of the Evolution of Dosage Compensation.” <i>Chromosome Research</i>. Springer, 2009. <a href=\"https://doi.org/10.1007/s10577-009-9053-y\">https://doi.org/10.1007/s10577-009-9053-y</a>.","mla":"Vicoso, Beatriz, and Doris Bachtrog. “Progress and Prospects toward Our Understanding of the Evolution of Dosage Compensation.” <i>Chromosome Research</i>, vol. 17, no. 5, Springer, 2009, pp. 585–602, doi:<a href=\"https://doi.org/10.1007/s10577-009-9053-y\">10.1007/s10577-009-9053-y</a>."},"date_published":"2009-07-01T00:00:00Z","page":"585 - 602","intvolume":"        17","_id":"2070"},{"intvolume":"        28","_id":"2094","conference":{"name":"ACM SIGGRAPH"},"date_published":"2009-07-27T00:00:00Z","citation":{"mla":"Bickel, Bernd, et al. <i>Capture and Modeling of Non-Linear Heterogeneous Soft Tissue</i>. Vol. 28, no. 3, ACM, 2009, doi:<a href=\"https://doi.org/10.1145/1576246.1531395 \">10.1145/1576246.1531395 </a>.","ama":"Bickel B, Bac̈Her M, Otaduy M, Matusik W, Pfister H, Groß M. Capture and modeling of non-linear heterogeneous soft tissue. In: Vol 28. ACM; 2009. doi:<a href=\"https://doi.org/10.1145/1576246.1531395 \">10.1145/1576246.1531395 </a>","ieee":"B. Bickel, M. Bac̈Her, M. Otaduy, W. Matusik, H. Pfister, and M. Groß, “Capture and modeling of non-linear heterogeneous soft tissue,” presented at the ACM SIGGRAPH, 2009, vol. 28, no. 3.","chicago":"Bickel, Bernd, Moritz Bac̈Her, Miguel Otaduy, Wojciech Matusik, Hanspeter Pfister, and Markus Groß. “Capture and Modeling of Non-Linear Heterogeneous Soft Tissue,” Vol. 28. ACM, 2009. <a href=\"https://doi.org/10.1145/1576246.1531395 \">https://doi.org/10.1145/1576246.1531395 </a>.","short":"B. Bickel, M. Bac̈Her, M. Otaduy, W. Matusik, H. Pfister, M. Groß, in:, ACM, 2009.","apa":"Bickel, B., Bac̈Her, M., Otaduy, M., Matusik, W., Pfister, H., &#38; Groß, M. (2009). Capture and modeling of non-linear heterogeneous soft tissue (Vol. 28). Presented at the ACM SIGGRAPH, ACM. <a href=\"https://doi.org/10.1145/1576246.1531395 \">https://doi.org/10.1145/1576246.1531395 </a>","ista":"Bickel B, Bac̈Her M, Otaduy M, Matusik W, Pfister H, Groß M. 2009. Capture and modeling of non-linear heterogeneous soft tissue. ACM SIGGRAPH vol. 28."},"author":[{"id":"49876194-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-6511-9385","full_name":"Bernd Bickel","last_name":"Bickel","first_name":"Bernd"},{"first_name":"Moritz","last_name":"Bac̈Her","full_name":"Bac̈her, Moritz"},{"full_name":"Otaduy, Miguel A","first_name":"Miguel","last_name":"Otaduy"},{"first_name":"Wojciech","last_name":"Matusik","full_name":"Matusik, Wojciech"},{"full_name":"Pfister, Hanspeter","last_name":"Pfister","first_name":"Hanspeter"},{"first_name":"Markus","last_name":"Groß","full_name":"Groß, Markus S"}],"abstract":[{"text":"This paper introduces a data-driven representation and modeling technique for simulating non-linear heterogeneous soft tissue. It simplifies the construction of convincing deformable models by avoiding complex selection and tuning of physical material parameters, yet retaining the richness of non-linear heterogeneous behavior. We acquire a set of example deformations of a real object, and represent each of them as a spatially varying stress-strain relationship in a finite-element model. We then model the material by non-linear interpolation of these stress-strain relationships in strain-space. Our method relies on a simple-to-build capture system and an efficient run-time simulation algorithm based on incremental loading, making it suitable for interactive computer graphics applications. We present the results of our approach for several non-linear materials and biological soft tissue, with accurate agreement of our model to the measured data. ","lang":"eng"}],"extern":1,"quality_controlled":0,"publisher":"ACM","month":"07","date_updated":"2019-04-26T07:22:08Z","issue":"3","title":"Capture and modeling of non-linear heterogeneous soft tissue","publist_id":"4940","status":"public","date_created":"2018-12-11T11:55:40Z","doi":"10.1145/1576246.1531395 ","volume":28,"year":"2009","acknowledgement":"This research was supported by the NCCR Co-Me grant of the Swiss National Science Foundation. Moritz Bacher was partially supported by the Initiative in Innovative Computing (IIC) and the School of Engineering and Applied Sciences (SEAS) at Harvard. ","day":"27","type":"conference","publication_status":"published"},{"extern":"1","abstract":[{"text":"The crystal structure of d(CACACG)·d(CGTGTG) was solved to a resolution of 2.05 Å in space group P21. The duplex assumes the left-handed Z-DNA structure. The presence of two A·T base pairs in the hexamer does not greatly affect the conformation. The most significant changes compared with the regular structure of Z-DNA are in the values of twist in the central portion of the helix. This variation, as well as others in the values of roll, inclination etc., follow the pattern observed previously in the structure of d(CGCACG)·d(CGTGCG).","lang":"eng"}],"author":[{"full_name":"Venkadesh, S.","first_name":"S.","last_name":"Venkadesh"},{"last_name":"Mandal","first_name":"Pradeep K","id":"6a3def15-d4b4-11ef-9fa9-a24c1f545ec3","full_name":"Mandal, Pradeep K","orcid":"0000-0001-5996-956X"},{"full_name":"Gautham, N.","last_name":"Gautham","first_name":"N."}],"oa_version":"None","_id":"21150","article_type":"original","page":"8-13","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_status":"published","volume":65,"year":"2009","date_updated":"2026-02-23T08:54:20Z","article_processing_charge":"No","quality_controlled":"1","publication":"Acta Crystallographica Section F Structural Biology Communications","month":"01","language":[{"iso":"eng"}],"publisher":"International Union of Crystallography","intvolume":"        65","date_published":"2009-01-01T00:00:00Z","citation":{"ama":"Venkadesh S, Mandal PK, Gautham N. The structure of d(CACACG)·d(CGTGTG). <i>Acta Crystallographica Section F Structural Biology Communications</i>. 2009;65(1):8-13. doi:<a href=\"https://doi.org/10.1107/s1744309108037706\">10.1107/s1744309108037706</a>","chicago":"Venkadesh, S., Pradeep K Mandal, and N. Gautham. “The Structure of d(CACACG)·d(CGTGTG).” <i>Acta Crystallographica Section F Structural Biology Communications</i>. International Union of Crystallography, 2009. <a href=\"https://doi.org/10.1107/s1744309108037706\">https://doi.org/10.1107/s1744309108037706</a>.","ieee":"S. Venkadesh, P. K. Mandal, and N. Gautham, “The structure of d(CACACG)·d(CGTGTG),” <i>Acta Crystallographica Section F Structural Biology Communications</i>, vol. 65, no. 1. International Union of Crystallography, pp. 8–13, 2009.","mla":"Venkadesh, S., et al. “The Structure of d(CACACG)·d(CGTGTG).” <i>Acta Crystallographica Section F Structural Biology Communications</i>, vol. 65, no. 1, International Union of Crystallography, 2009, pp. 8–13, doi:<a href=\"https://doi.org/10.1107/s1744309108037706\">10.1107/s1744309108037706</a>.","ista":"Venkadesh S, Mandal PK, Gautham N. 2009. The structure of d(CACACG)·d(CGTGTG). Acta Crystallographica Section F Structural Biology Communications. 65(1), 8–13.","apa":"Venkadesh, S., Mandal, P. K., &#38; Gautham, N. (2009). The structure of d(CACACG)·d(CGTGTG). <i>Acta Crystallographica Section F Structural Biology Communications</i>. International Union of Crystallography. <a href=\"https://doi.org/10.1107/s1744309108037706\">https://doi.org/10.1107/s1744309108037706</a>","short":"S. Venkadesh, P.K. Mandal, N. Gautham, Acta Crystallographica Section F Structural Biology Communications 65 (2009) 8–13."},"doi":"10.1107/s1744309108037706","date_created":"2026-02-06T12:06:24Z","status":"public","has_accepted_license":"1","type":"journal_article","day":"01","OA_type":"closed access","issue":"1","title":"The structure of d(CACACG)·d(CGTGTG)","publication_identifier":{"issn":["1744-3091"]}},{"intvolume":"       257","_id":"2119","page":"2410 - 2475","date_published":"2009-10-15T00:00:00Z","oa":1,"citation":{"ama":"Maas J, Van Neerven J. Boundedness of Riesz transforms for elliptic operators on abstract Wiener spaces. <i>Journal of Functional Analysis</i>. 2009;257(8):2410-2475. doi:<a href=\"https://doi.org/10.1016/j.jfa.2009.07.001\">10.1016/j.jfa.2009.07.001</a>","ieee":"J. Maas and J. Van Neerven, “Boundedness of Riesz transforms for elliptic operators on abstract Wiener spaces,” <i>Journal of Functional Analysis</i>, vol. 257, no. 8. Academic Press, pp. 2410–2475, 2009.","chicago":"Maas, Jan, and Jan Van Neerven. “Boundedness of Riesz Transforms for Elliptic Operators on Abstract Wiener Spaces.” <i>Journal of Functional Analysis</i>. Academic Press, 2009. <a href=\"https://doi.org/10.1016/j.jfa.2009.07.001\">https://doi.org/10.1016/j.jfa.2009.07.001</a>.","mla":"Maas, Jan, and Jan Van Neerven. “Boundedness of Riesz Transforms for Elliptic Operators on Abstract Wiener Spaces.” <i>Journal of Functional Analysis</i>, vol. 257, no. 8, Academic Press, 2009, pp. 2410–75, doi:<a href=\"https://doi.org/10.1016/j.jfa.2009.07.001\">10.1016/j.jfa.2009.07.001</a>.","apa":"Maas, J., &#38; Van Neerven, J. (2009). Boundedness of Riesz transforms for elliptic operators on abstract Wiener spaces. <i>Journal of Functional Analysis</i>. Academic Press. <a href=\"https://doi.org/10.1016/j.jfa.2009.07.001\">https://doi.org/10.1016/j.jfa.2009.07.001</a>","ista":"Maas J, Van Neerven J. 2009. Boundedness of Riesz transforms for elliptic operators on abstract Wiener spaces. Journal of Functional Analysis. 257(8), 2410–2475.","short":"J. Maas, J. Van Neerven, Journal of Functional Analysis 257 (2009) 2410–2475."},"author":[{"orcid":"0000-0002-0845-1338","full_name":"Jan Maas","id":"4C5696CE-F248-11E8-B48F-1D18A9856A87","first_name":"Jan","last_name":"Maas"},{"last_name":"Van Neerven","first_name":"Jan","full_name":"van Neerven, Jan M"}],"publication":"Journal of Functional Analysis","abstract":[{"lang":"eng","text":"Let (E, H, μ) be an abstract Wiener space and let DV : = V D, where D denotes the Malliavin derivative and V is a closed and densely defined operator from H into another Hilbert space under(H, {combining low line}). Given a bounded operator B on under(H, {combining low line}), coercive on the range over(R (V), -), we consider the operators A : = V* B V in H and under(A, {combining low line}) : = V V* B in under(H, {combining low line}), as well as the realisations of the operators L : = DV* B DV and under(L, {combining low line}) : = DV DV* B in Lp (E, μ) and Lp (E, μ ; under(H, {combining low line})) respectively, where 1 &lt; p &lt; ∞. Our main result asserts that the following four assertions are equivalent: (1)D (sqrt(L)) = D (DV) with {norm of matrix} sqrt(L) f {norm of matrix}p {minus tilde} {norm of matrix} DV f {norm of matrix}p for f ∈ D (sqrt(L));(2)under(L, {combining low line}) admits a bounded H∞-functional calculus on over(R (DV), -);(3)D (sqrt(A)) = D (V) with {norm of matrix} sqrt(A) h {norm of matrix} {minus tilde} {norm of matrix} V h {norm of matrix} for h ∈ D (sqrt(A));(4)under(A, {combining low line}) admits a bounded H∞-functional calculus on over(R (V), -). Moreover, if these conditions are satisfied, then D (L) = D (DV2) ∩ D (DA). The equivalence (1)-(4) is a non-symmetric generalisation of the classical Meyer inequalities of Malliavin calculus (where under(H, {combining low line}) = H, V = I, B = frac(1, 2) I). A one-sided version of (1)-(4), giving Lp-boundedness of the Riesz transform DV / sqrt(L) in terms of a square function estimate, is also obtained. As an application let -A generate an analytic C0-contraction semigroup on a Hilbert space H and let -L be the Lp-realisation of the generator of its second quantisation. Our results imply that two-sided bounds for the Riesz transform of L are equivalent with the Kato square root property for A. The boundedness of the Riesz transform is used to obtain an Lp-domain characterisation for the operator L."}],"extern":1,"quality_controlled":0,"publisher":"Academic Press","month":"10","date_updated":"2021-01-12T06:55:25Z","title":"Boundedness of Riesz transforms for elliptic operators on abstract Wiener spaces","issue":"8","publist_id":"4913","status":"public","main_file_link":[{"url":"http://arxiv.org/abs/0804.1432","open_access":"1"}],"doi":"10.1016/j.jfa.2009.07.001","date_created":"2018-12-11T11:55:49Z","volume":257,"year":"2009","day":"15","type":"journal_article","publication_status":"published"},{"publist_id":"4898","issue":"7","title":"Local atomic structure of niobates and titanates from X-ray absorption spectroscopic data","date_updated":"2021-01-12T06:55:31Z","publication_status":"published","type":"conference","day":"12","acknowledgement":"This study was supported by the Russian Founda*tion for Basic Research (project no. 07*02*00796a).","year":"2009","volume":51,"doi":"10.1134/S106378340907018X","date_created":"2018-12-11T11:55:55Z","status":"public","citation":{"mla":"Vedrinskiǐ, Rostislav, et al. <i>Local Atomic Structure of Niobates and Titanates from X-Ray Absorption Spectroscopic Data</i>. Vol. 51, no. 7, Springer, 2009, pp. 1394–98, doi:<a href=\"https://doi.org/10.1134/S106378340907018X\">10.1134/S106378340907018X</a>.","ieee":"R. Vedrinskiǐ <i>et al.</i>, “Local atomic structure of niobates and titanates from X-ray absorption spectroscopic data,” presented at the CoPoF: 18th All-Russia Conference on Physics of Ferroelectrics (VKS-XVIII), 2009, vol. 51, no. 7, pp. 1394–1398.","chicago":"Vedrinskiǐ, Rostislav, V. Kraǐzman, Mikhail Lemeshko, Elena Nazarenko, Alexander Novakovich, Larisa Reznichenko, Vladimir Fokin, and Victoria Shuvaeva. “Local Atomic Structure of Niobates and Titanates from X-Ray Absorption Spectroscopic Data,” 51:1394–98. Springer, 2009. <a href=\"https://doi.org/10.1134/S106378340907018X\">https://doi.org/10.1134/S106378340907018X</a>.","ama":"Vedrinskiǐ R, Kraǐzman V, Lemeshko M, et al. Local atomic structure of niobates and titanates from X-ray absorption spectroscopic data. In: Vol 51. Springer; 2009:1394-1398. doi:<a href=\"https://doi.org/10.1134/S106378340907018X\">10.1134/S106378340907018X</a>","short":"R. Vedrinskiǐ, V. Kraǐzman, M. Lemeshko, E. Nazarenko, A. Novakovich, L. Reznichenko, V. Fokin, V. Shuvaeva, in:, Springer, 2009, pp. 1394–1398.","ista":"Vedrinskiǐ R, Kraǐzman V, Lemeshko M, Nazarenko E, Novakovich A, Reznichenko L, Fokin V, Shuvaeva V. 2009. Local atomic structure of niobates and titanates from X-ray absorption spectroscopic data. CoPoF: 18th All-Russia Conference on Physics of Ferroelectrics (VKS-XVIII) vol. 51, 1394–1398.","apa":"Vedrinskiǐ, R., Kraǐzman, V., Lemeshko, M., Nazarenko, E., Novakovich, A., Reznichenko, L., … Shuvaeva, V. (2009). Local atomic structure of niobates and titanates from X-ray absorption spectroscopic data (Vol. 51, pp. 1394–1398). Presented at the CoPoF: 18th All-Russia Conference on Physics of Ferroelectrics (VKS-XVIII), Springer. <a href=\"https://doi.org/10.1134/S106378340907018X\">https://doi.org/10.1134/S106378340907018X</a>"},"date_published":"2009-07-12T00:00:00Z","page":"1394 - 1398","conference":{"name":"CoPoF: 18th All-Russia Conference on Physics of Ferroelectrics (VKS-XVIII)"},"intvolume":"        51","_id":"2136","month":"07","publisher":"Springer","quality_controlled":0,"extern":1,"abstract":[{"lang":"eng","text":"The local atomic structure of PbTiO3, BaTiO3, and KNbO3 perovskite-type crystals and K x Na1 − x NbO3 solid solutions in different phases is investigated using the angular dependence of the pre-edge structure of the Ti and Nb K X-ray absorption spectra and the EXAFS data. In noncubic phases, a considerable deviation of the local structure from the structure determined from diffraction data is observed only for the tetragonal phase of the BaTiO3 crystal. It is revealed that, in the cubic phase of niobates, the niobium atoms are characterized by significant displacements from the centrosymmetric positions along the threefold axes, so that they are close in the magnitude and the direction to the displacements in the low-temperatures rhombohedral phases."}],"author":[{"first_name":"Rostislav","last_name":"Vedrinskiǐ","full_name":"Vedrinskiǐ, Rostislav V"},{"full_name":"Kraǐzman, V. L","first_name":"V.","last_name":"Kraǐzman"},{"full_name":"Mikhail Lemeshko","orcid":"0000-0002-6990-7802","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","first_name":"Mikhail","last_name":"Lemeshko"},{"last_name":"Nazarenko","first_name":"Elena","full_name":"Nazarenko, Elena S"},{"full_name":"Novakovich, Alexander A","last_name":"Novakovich","first_name":"Alexander"},{"full_name":"Reznichenko, Larisa A","first_name":"Larisa","last_name":"Reznichenko"},{"last_name":"Fokin","first_name":"Vladimir","full_name":"Fokin, Vladimir N"},{"full_name":"Shuvaeva, Victoria A","last_name":"Shuvaeva","first_name":"Victoria"}]},{"publisher":"Global Science Press","month":"10","author":[{"first_name":"Mikhail","last_name":"Lemeshko","full_name":"Mikhail Lemeshko","orcid":"0000-0002-6990-7802","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Frierich","first_name":"Bretislav","full_name":"Frierich, Bretislav"}],"publication":"Journal of Atomic and Molecular Sciences","abstract":[{"lang":"eng","text":"Relying on the quantization rule of Raab and Friedrich [Phys. Rev. A (2009) in press], we derive simple and accurate formulae for the number of rotational states supported by a weakly bound vibrational level of a diatomic molecular ion. We also provide analytic estimates of the rotational constants of any such levels up to threshold for dissociation and obtain a criterion for determining whether a given weakly bound vibrational level is rotationless. The results depend solely on the long-range part of the molecular potential."}],"extern":1,"quality_controlled":0,"page":"41 - 47","date_published":"2009-10-10T00:00:00Z","oa":1,"citation":{"ieee":"M. Lemeshko and B. Frierich, “Rotational structure of weakly bound molecular ions,” <i>Journal of Atomic and Molecular Sciences</i>, vol. 1, no. 1. Global Science Press, pp. 41–47, 2009.","chicago":"Lemeshko, Mikhail, and Bretislav Frierich. “Rotational Structure of Weakly Bound Molecular Ions.” <i>Journal of Atomic and Molecular Sciences</i>. Global Science Press, 2009. <a href=\"https://doi.org/10.4208/jams.101009.110209a\">https://doi.org/10.4208/jams.101009.110209a</a>.","ama":"Lemeshko M, Frierich B. Rotational structure of weakly bound molecular ions. <i>Journal of Atomic and Molecular Sciences</i>. 2009;1(1):41-47. doi:<a href=\"https://doi.org/10.4208/jams.101009.110209a\">10.4208/jams.101009.110209a</a>","mla":"Lemeshko, Mikhail, and Bretislav Frierich. “Rotational Structure of Weakly Bound Molecular Ions.” <i>Journal of Atomic and Molecular Sciences</i>, vol. 1, no. 1, Global Science Press, 2009, pp. 41–47, doi:<a href=\"https://doi.org/10.4208/jams.101009.110209a\">10.4208/jams.101009.110209a</a>.","ista":"Lemeshko M, Frierich B. 2009. Rotational structure of weakly bound molecular ions. Journal of Atomic and Molecular Sciences. 1(1), 41–47.","apa":"Lemeshko, M., &#38; Frierich, B. (2009). Rotational structure of weakly bound molecular ions. <i>Journal of Atomic and Molecular Sciences</i>. Global Science Press. <a href=\"https://doi.org/10.4208/jams.101009.110209a\">https://doi.org/10.4208/jams.101009.110209a</a>","short":"M. Lemeshko, B. Frierich, Journal of Atomic and Molecular Sciences 1 (2009) 41–47."},"intvolume":"         1","_id":"2137","year":"2009","volume":1,"type":"journal_article","day":"10","publication_status":"published","status":"public","main_file_link":[{"url":"http://arxiv.org/abs/0910.5743","open_access":"1"}],"doi":"10.4208/jams.101009.110209a","date_created":"2018-12-11T11:55:55Z","publist_id":"4887","date_updated":"2021-01-12T06:55:32Z","title":"Rotational structure of weakly bound molecular ions","issue":"1"},{"publication":"Physical Review A - Atomic, Molecular, and Optical Physics","author":[{"last_name":"Lemeshko","first_name":"Mikhail","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6990-7802","full_name":"Mikhail Lemeshko"},{"first_name":"Břetislav","last_name":"Friedrich","full_name":"Friedrich, Břetislav"}],"quality_controlled":0,"abstract":[{"text":"We investigate the effects of a magnetic field on the dynamics of rotationally inelastic collisions of open-shell molecules (Σ2, Σ3, and Π2) with closed-shell atoms. Our treatment makes use of the Fraunhofer model of matter wave scattering and its recent extension to collisions in electric [M. Lemeshko and B. Friedrich, J. Chem. Phys. 129, 024301 (2008)] and radiative fields [M. Lemeshko and B. Friedrich, Int. J. Mass. Spec. 280, 19 (2009)]. A magnetic field aligns the molecule in the space-fixed frame and thereby alters the effective shape of the diffraction target. This significantly affects the differential and integral scattering cross sections. We exemplify our treatment by evaluating the magnetic-field-dependent scattering characteristics of the He-CaH (XΣ+2), He-O2 (XΣ–3), and He-OH (XΠΩ2) systems at thermal collision energies. Since the cross sections can be obtained for different orientations of the magnetic field with respect to the relative velocity vector, the model also offers predictions about the frontal-versus-lateral steric asymmetry of the collisions. The steric asymmetry is found to be almost negligible for the He-OH system, weak for the He-CaH collisions, and strong for the He-O2. While odd ΔM transitions dominate the He-OH [J=3/2,f→J′,e/f] integral cross sections in a magnetic field parallel to the relative velocity vector, even ΔM transitions prevail in the case of the He-CaH (X2Σ+) and He-O2 (XΣ−3) collision systems. For the latter system, the magnetic field opens inelastic channels that are closed in the absence of the field. These involve the transitions N=1,J=0→N′, J′ with J′=N′.","lang":"eng"}],"extern":1,"publisher":"American Physical Society","month":"01","intvolume":"        79","_id":"2149","citation":{"short":"M. Lemeshko, B. Friedrich, Physical Review A - Atomic, Molecular, and Optical Physics 79 (2009).","ista":"Lemeshko M, Friedrich B. 2009. Collisions of paramagnetic molecules in magnetic fields: An analytic model based on Fraunhofer diffraction of matter waves. Physical Review A - Atomic, Molecular, and Optical Physics. 79(1).","apa":"Lemeshko, M., &#38; Friedrich, B. (2009). Collisions of paramagnetic molecules in magnetic fields: An analytic model based on Fraunhofer diffraction of matter waves. <i>Physical Review A - Atomic, Molecular, and Optical Physics</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevA.79.012718\">https://doi.org/10.1103/PhysRevA.79.012718</a>","mla":"Lemeshko, Mikhail, and Břetislav Friedrich. “Collisions of Paramagnetic Molecules in Magnetic Fields: An Analytic Model Based on Fraunhofer Diffraction of Matter Waves.” <i>Physical Review A - Atomic, Molecular, and Optical Physics</i>, vol. 79, no. 1, American Physical Society, 2009, doi:<a href=\"https://doi.org/10.1103/PhysRevA.79.012718\">10.1103/PhysRevA.79.012718</a>.","chicago":"Lemeshko, Mikhail, and Břetislav Friedrich. “Collisions of Paramagnetic Molecules in Magnetic Fields: An Analytic Model Based on Fraunhofer Diffraction of Matter Waves.” <i>Physical Review A - Atomic, Molecular, and Optical Physics</i>. American Physical Society, 2009. <a href=\"https://doi.org/10.1103/PhysRevA.79.012718\">https://doi.org/10.1103/PhysRevA.79.012718</a>.","ieee":"M. Lemeshko and B. Friedrich, “Collisions of paramagnetic molecules in magnetic fields: An analytic model based on Fraunhofer diffraction of matter waves,” <i>Physical Review A - Atomic, Molecular, and Optical Physics</i>, vol. 79, no. 1. American Physical Society, 2009.","ama":"Lemeshko M, Friedrich B. Collisions of paramagnetic molecules in magnetic fields: An analytic model based on Fraunhofer diffraction of matter waves. <i>Physical Review A - Atomic, Molecular, and Optical Physics</i>. 2009;79(1). doi:<a href=\"https://doi.org/10.1103/PhysRevA.79.012718\">10.1103/PhysRevA.79.012718</a>"},"oa":1,"date_published":"2009-01-30T00:00:00Z","status":"public","date_created":"2018-12-11T11:55:59Z","doi":"10.1103/PhysRevA.79.012718","main_file_link":[{"url":"http://arxiv.org/abs/0809.3331","open_access":"1"}],"year":"2009","volume":79,"publication_status":"published","day":"30","type":"journal_article","date_updated":"2021-01-12T06:55:36Z","title":"Collisions of paramagnetic molecules in magnetic fields: An analytic model based on Fraunhofer diffraction of matter waves","issue":"1","publist_id":"4875"},{"_id":"2150","intvolume":"       280","citation":{"ista":"Lemeshko M, Friedrich B. 2009. The effect of a nonresonant radiative field on low-energy rotationally inelastic Na+ + N2 collisions. International Journal of Mass Spectrometry. 280(1–3), 19–25.","apa":"Lemeshko, M., &#38; Friedrich, B. (2009). The effect of a nonresonant radiative field on low-energy rotationally inelastic Na+ + N2 collisions. <i>International Journal of Mass Spectrometry</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.ijms.2008.06.010 \">https://doi.org/10.1016/j.ijms.2008.06.010 </a>","short":"M. Lemeshko, B. Friedrich, International Journal of Mass Spectrometry 280 (2009) 19–25.","ieee":"M. Lemeshko and B. Friedrich, “The effect of a nonresonant radiative field on low-energy rotationally inelastic Na+ + N2 collisions,” <i>International Journal of Mass Spectrometry</i>, vol. 280, no. 1–3. Elsevier, pp. 19–25, 2009.","chicago":"Lemeshko, Mikhail, and Břetislav Friedrich. “The Effect of a Nonresonant Radiative Field on Low-Energy Rotationally Inelastic Na+ + N2 Collisions.” <i>International Journal of Mass Spectrometry</i>. Elsevier, 2009. <a href=\"https://doi.org/10.1016/j.ijms.2008.06.010 \">https://doi.org/10.1016/j.ijms.2008.06.010 </a>.","ama":"Lemeshko M, Friedrich B. The effect of a nonresonant radiative field on low-energy rotationally inelastic Na+ + N2 collisions. <i>International Journal of Mass Spectrometry</i>. 2009;280(1-3):19-25. doi:<a href=\"https://doi.org/10.1016/j.ijms.2008.06.010 \">10.1016/j.ijms.2008.06.010 </a>","mla":"Lemeshko, Mikhail, and Břetislav Friedrich. “The Effect of a Nonresonant Radiative Field on Low-Energy Rotationally Inelastic Na+ + N2 Collisions.” <i>International Journal of Mass Spectrometry</i>, vol. 280, no. 1–3, Elsevier, 2009, pp. 19–25, doi:<a href=\"https://doi.org/10.1016/j.ijms.2008.06.010 \">10.1016/j.ijms.2008.06.010 </a>."},"oa":1,"date_published":"2009-02-01T00:00:00Z","page":"19 - 25","quality_controlled":0,"abstract":[{"lang":"eng","text":"We examine the effects of a linearly polarized nonresonant radiative field on the dynamics of rotationally inelastic Na+ + N2 collisions at eV collision energies. Our treatment is based on the Fraunhofer model of matter wave scattering and its recent extension to collisions in electric fields [M. Lemeshko, B. Friedrich, J. Chem. Phys. 129 (2008) 024301]. The nonresonant radiative field changes the effective shape of the target molecule by aligning it in the space-fixed frame. This markedly alters the differential and integral scattering cross-sections. As the cross-sections can be evaluated for a polarization of the radiative field collinear or perpendicular to the relative velocity vector, the model also offers predictions about steric asymmetry of the collisions."}],"extern":1,"publication":"International Journal of Mass Spectrometry","author":[{"first_name":"Mikhail","last_name":"Lemeshko","full_name":"Mikhail Lemeshko","orcid":"0000-0002-6990-7802","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Friedrich, Břetislav","last_name":"Friedrich","first_name":"Břetislav"}],"month":"02","publisher":"Elsevier","title":"The effect of a nonresonant radiative field on low-energy rotationally inelastic Na+ + N2 collisions","issue":"1-3","date_updated":"2021-01-12T06:55:37Z","publist_id":"4874","date_created":"2018-12-11T11:56:00Z","doi":"10.1016/j.ijms.2008.06.010 ","main_file_link":[{"open_access":"1","url":"http://arxiv.org/abs/0804.4845"}],"status":"public","publication_status":"published","day":"01","type":"journal_article","volume":280,"year":"2009"},{"language":[{"iso":"eng"}],"publisher":"Springer Nature","month":"06","publication":"Microsystem Technologies","article_processing_charge":"No","quality_controlled":"1","date_published":"2009-06-01T00:00:00Z","citation":{"ama":"Sahli M, Millot C, Roques-Carmes C, Khan Malek C. Experimental analysis and numerical modelling of the forming process of polypropylene replicas of micro-cavities using hot embossing. <i>Microsystem Technologies</i>. 2009;15(6):827-835. doi:<a href=\"https://doi.org/10.1007/s00542-009-0813-6\">10.1007/s00542-009-0813-6</a>","ieee":"M. Sahli, C. Millot, C. Roques-Carmes, and C. Khan Malek, “Experimental analysis and numerical modelling of the forming process of polypropylene replicas of micro-cavities using hot embossing,” <i>Microsystem Technologies</i>, vol. 15, no. 6. Springer Nature, pp. 827–835, 2009.","chicago":"Sahli, Mohamed, Christine Millot, Charles Roques-Carmes, and Chantal Khan Malek. “Experimental Analysis and Numerical Modelling of the Forming Process of Polypropylene Replicas of Micro-Cavities Using Hot Embossing.” <i>Microsystem Technologies</i>. Springer Nature, 2009. <a href=\"https://doi.org/10.1007/s00542-009-0813-6\">https://doi.org/10.1007/s00542-009-0813-6</a>.","mla":"Sahli, Mohamed, et al. “Experimental Analysis and Numerical Modelling of the Forming Process of Polypropylene Replicas of Micro-Cavities Using Hot Embossing.” <i>Microsystem Technologies</i>, vol. 15, no. 6, Springer Nature, 2009, pp. 827–35, doi:<a href=\"https://doi.org/10.1007/s00542-009-0813-6\">10.1007/s00542-009-0813-6</a>.","apa":"Sahli, M., Millot, C., Roques-Carmes, C., &#38; Khan Malek, C. (2009). Experimental analysis and numerical modelling of the forming process of polypropylene replicas of micro-cavities using hot embossing. <i>Microsystem Technologies</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00542-009-0813-6\">https://doi.org/10.1007/s00542-009-0813-6</a>","ista":"Sahli M, Millot C, Roques-Carmes C, Khan Malek C. 2009. Experimental analysis and numerical modelling of the forming process of polypropylene replicas of micro-cavities using hot embossing. Microsystem Technologies. 15(6), 827–835.","short":"M. Sahli, C. Millot, C. Roques-Carmes, C. Khan Malek, Microsystem Technologies 15 (2009) 827–835."},"intvolume":"        15","day":"01","type":"journal_article","status":"public","doi":"10.1007/s00542-009-0813-6","date_created":"2026-03-30T12:22:47Z","ddc":["530"],"scopus_import":"1","publication_identifier":{"eissn":["1432-1858"],"issn":["0946-7076"]},"OA_type":"closed access","title":"Experimental analysis and numerical modelling of the forming process of polypropylene replicas of micro-cavities using hot embossing","issue":"6","author":[{"full_name":"Sahli, Mohamed","first_name":"Mohamed","last_name":"Sahli"},{"full_name":"Millot, Christine","last_name":"Millot","first_name":"Christine"},{"id":"e2e68fc9-6505-11ef-a541-eb4e72cc3e82","full_name":"Roques-Carmes, Charles","last_name":"Roques-Carmes","first_name":"Charles"},{"full_name":"Khan Malek, Chantal","last_name":"Khan Malek","first_name":"Chantal"}],"extern":"1","abstract":[{"lang":"eng","text":"Numerical modelling of the deformation of a polymer using the finite elements method in axisymetrical mode was performed using the LsDyna® software to describe the filling of micro-cavities during the forming process of the material using the hot embossing. These simulations firstly allow verifying whether the chosen forming process conditions promote or not an optimized filling of the superficial cavities in order to achieve precise replicas which best reproduce the superficial topography of the mould. The simulations were carried out to evaluate the filling of the cavities taking into account the mechanical behaviour of the selected polymer into the model. Moreover, these models were developed to verify the effect of the distribution of the mould cavities on their filling. The influence of the mobility of non deformable rigid plates on the filling of the cavities represents an auxiliary variable. In the approach presented, the compression plates are assumed to be parallel and non deformable, whereas the polymer disk follows a rubbery behaviour around a temperature equal to 140°C. Globally the modelling results are satisfactory for they are rather close to the experimental observations conducted. In summary, the effect of the normal stress as also the distribution of micro-cavities at the mould surface seem to prevail in the case of the forming process by hot embossing."}],"article_type":"original","page":"827-835","_id":"21513","oa_version":"None","volume":15,"year":"2009","publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_updated":"2026-04-27T09:57:37Z"},{"date_updated":"2026-04-15T12:52:03Z","keyword":["Hot embossing","Micro-injection moulding","Micro-cavities replication","Polypropylene polymer","Scanning mechanical microscopy","Roughness parameters"],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":209,"year":"2009","publication_status":"published","_id":"21514","oa_version":"None","page":"5851-5861","article_type":"original","author":[{"first_name":"M.","last_name":"Sahli","full_name":"Sahli, M."},{"full_name":"Millot, C.","last_name":"Millot","first_name":"C."},{"first_name":"Charles","last_name":"Roques-Carmes","full_name":"Roques-Carmes, Charles","id":"e2e68fc9-6505-11ef-a541-eb4e72cc3e82"},{"full_name":"Khan Malek, C.","first_name":"C.","last_name":"Khan Malek"},{"first_name":"T.","last_name":"Barriere","full_name":"Barriere, T."},{"full_name":"Gelin, J.C.","first_name":"J.C.","last_name":"Gelin"}],"extern":"1","abstract":[{"lang":"eng","text":"This paper describes observations and metrological analyses made to compare the replication quality of polymeric replicas obtained by filling micro-cavities using both hot embossing and micro-injection moulding processes. The experiments are performed with polypropylene (PP) at a constant melt temperature and a constant mould temperature, whereas hot embossing tests are carried out with the same polymer at temperatures close to the softening one.\r\nThe results concerning the micro-cavities filling provide information on the reliability about the possibilities of replication topographical surface geometries. The data obtained by scanning mechanical microscopy (SMM) are used to determine the comparative filling ratio values."}],"OA_type":"closed access","title":"Quality assessment of polymer replication by hot embossing and micro-injection moulding processes using scanning mechanical microscopy","issue":"18-19","ddc":["530"],"scopus_import":"1","publication_identifier":{"eissn":["1873-4774"],"issn":["0924-0136"]},"status":"public","date_created":"2026-03-30T12:22:47Z","doi":"10.1016/j.jmatprotec.2009.06.011","type":"journal_article","day":"19","intvolume":"       209","date_published":"2009-09-19T00:00:00Z","citation":{"ama":"Sahli M, Millot C, Roques-Carmes C, Khan Malek C, Barriere T, Gelin JC. Quality assessment of polymer replication by hot embossing and micro-injection moulding processes using scanning mechanical microscopy. <i>Journal of Materials Processing Technology</i>. 2009;209(18-19):5851-5861. doi:<a href=\"https://doi.org/10.1016/j.jmatprotec.2009.06.011\">10.1016/j.jmatprotec.2009.06.011</a>","ieee":"M. Sahli, C. Millot, C. Roques-Carmes, C. Khan Malek, T. Barriere, and J. C. Gelin, “Quality assessment of polymer replication by hot embossing and micro-injection moulding processes using scanning mechanical microscopy,” <i>Journal of Materials Processing Technology</i>, vol. 209, no. 18–19. Elsevier, pp. 5851–5861, 2009.","chicago":"Sahli, M., C. Millot, Charles Roques-Carmes, C. Khan Malek, T. Barriere, and J.C. Gelin. “Quality Assessment of Polymer Replication by Hot Embossing and Micro-Injection Moulding Processes Using Scanning Mechanical Microscopy.” <i>Journal of Materials Processing Technology</i>. Elsevier, 2009. <a href=\"https://doi.org/10.1016/j.jmatprotec.2009.06.011\">https://doi.org/10.1016/j.jmatprotec.2009.06.011</a>.","mla":"Sahli, M., et al. “Quality Assessment of Polymer Replication by Hot Embossing and Micro-Injection Moulding Processes Using Scanning Mechanical Microscopy.” <i>Journal of Materials Processing Technology</i>, vol. 209, no. 18–19, Elsevier, 2009, pp. 5851–61, doi:<a href=\"https://doi.org/10.1016/j.jmatprotec.2009.06.011\">10.1016/j.jmatprotec.2009.06.011</a>.","apa":"Sahli, M., Millot, C., Roques-Carmes, C., Khan Malek, C., Barriere, T., &#38; Gelin, J. C. (2009). Quality assessment of polymer replication by hot embossing and micro-injection moulding processes using scanning mechanical microscopy. <i>Journal of Materials Processing Technology</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jmatprotec.2009.06.011\">https://doi.org/10.1016/j.jmatprotec.2009.06.011</a>","ista":"Sahli M, Millot C, Roques-Carmes C, Khan Malek C, Barriere T, Gelin JC. 2009. Quality assessment of polymer replication by hot embossing and micro-injection moulding processes using scanning mechanical microscopy. Journal of Materials Processing Technology. 209(18–19), 5851–5861.","short":"M. Sahli, C. Millot, C. Roques-Carmes, C. Khan Malek, T. Barriere, J.C. Gelin, Journal of Materials Processing Technology 209 (2009) 5851–5861."},"publication":"Journal of Materials Processing Technology","article_processing_charge":"No","quality_controlled":"1","language":[{"iso":"eng"}],"publisher":"Elsevier","month":"09"},{"intvolume":"        55","date_published":"2009-03-01T00:00:00Z","citation":{"mla":"Carenzo, Marco, et al. “Assessing the Transferability and Robustness of an Enhanced Temperature-Index Glacier-Melt Model.” <i>Journal of Glaciology</i>, vol. 55, no. 190, Cambridge University Press, 2009, pp. 258–74, doi:<a href=\"https://doi.org/10.3189/002214309788608804\">10.3189/002214309788608804</a>.","ieee":"M. Carenzo, F. Pellicciotti, S. Rimkus, and P. Burlando, “Assessing the transferability and robustness of an enhanced temperature-index glacier-melt model,” <i>Journal of Glaciology</i>, vol. 55, no. 190. Cambridge University Press, pp. 258–274, 2009.","chicago":"Carenzo, Marco, Francesca Pellicciotti, Stefan Rimkus, and Paolo Burlando. “Assessing the Transferability and Robustness of an Enhanced Temperature-Index Glacier-Melt Model.” <i>Journal of Glaciology</i>. Cambridge University Press, 2009. <a href=\"https://doi.org/10.3189/002214309788608804\">https://doi.org/10.3189/002214309788608804</a>.","ama":"Carenzo M, Pellicciotti F, Rimkus S, Burlando P. Assessing the transferability and robustness of an enhanced temperature-index glacier-melt model. <i>Journal of Glaciology</i>. 2009;55(190):258-274. doi:<a href=\"https://doi.org/10.3189/002214309788608804\">10.3189/002214309788608804</a>","short":"M. Carenzo, F. Pellicciotti, S. Rimkus, P. Burlando, Journal of Glaciology 55 (2009) 258–274.","apa":"Carenzo, M., Pellicciotti, F., Rimkus, S., &#38; Burlando, P. (2009). Assessing the transferability and robustness of an enhanced temperature-index glacier-melt model. <i>Journal of Glaciology</i>. Cambridge University Press. <a href=\"https://doi.org/10.3189/002214309788608804\">https://doi.org/10.3189/002214309788608804</a>","ista":"Carenzo M, Pellicciotti F, Rimkus S, Burlando P. 2009. Assessing the transferability and robustness of an enhanced temperature-index glacier-melt model. Journal of Glaciology. 55(190), 258–274."},"publication":"Journal of Glaciology","article_processing_charge":"No","quality_controlled":"1","language":[{"iso":"eng"}],"publisher":"Cambridge University Press","month":"03","title":"Assessing the transferability and robustness of an enhanced temperature-index glacier-melt model","issue":"190","scopus_import":"1","publication_identifier":{"eissn":["1727-5652"],"issn":["0022-1430"]},"status":"public","main_file_link":[{"open_access":"1","url":"https://doi.org/10.3189/002214309788608804"}],"date_created":"2023-02-20T08:18:34Z","doi":"10.3189/002214309788608804","day":"01","type":"journal_article","_id":"12654","oa_version":"Published Version","page":"258-274","article_type":"original","oa":1,"author":[{"full_name":"Carenzo, Marco","last_name":"Carenzo","first_name":"Marco"},{"last_name":"Pellicciotti","first_name":"Francesca","id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","full_name":"Pellicciotti, Francesca","orcid":"0000-0002-5554-8087"},{"first_name":"Stefan","last_name":"Rimkus","full_name":"Rimkus, Stefan"},{"first_name":"Paolo","last_name":"Burlando","full_name":"Burlando, Paolo"}],"extern":"1","abstract":[{"lang":"eng","text":"We investigate the transferability of an enhanced temperature-index melt model that was developed and tested on Haut Glacier d’Arolla, Switzerland, in the 2001 season. The model’s empirical parameters (temperature factor, TF, and shortwave radiation factor, SRF) are recalibrated for: (1) other locations on Haut Glacier d’Arolla; (2) subperiods of distinct meteorological conditions; (3) different years on Haut Glacier d’Arolla; and (4) other glaciers in different years. The model parameters are optimized against simulations of an energy-balance model validated against ablation observations. Results are compared with those obtained with the original parameters. The model works very well when applied to other sites, seasons and glaciers, with the exception of overcast conditions. Differences are due to underestimation of high melt rates. The parameter values are associated with the prevailing energy-balance conditions, showing that high SRF are obtained on clear-sky days, whereas higher TF are typical of locations where glacier winds prevail and turbulent fluxes are high. We also provide a range of parameters clearly associated with the site’s location and its meteorological characteristics that could help to assign parameter values to sites where few data are available."}],"date_updated":"2024-10-14T12:00:39Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":55,"year":"2009","publication_status":"published"},{"month":"01","language":[{"iso":"eng"}],"publisher":"International Glaciological Society","article_processing_charge":"No","quality_controlled":"1","publication":"Annals of Glaciology","date_published":"2009-01-01T00:00:00Z","citation":{"short":"F. Pellicciotti, M. Carenzo, J. Helbing, S. Rimkus, P. Burlando, Annals of Glaciology 50 (2009) 16–24.","ista":"Pellicciotti F, Carenzo M, Helbing J, Rimkus S, Burlando P. 2009. On the role of subsurface heat conduction in glacier energy-balance modelling. Annals of Glaciology. 50(50), 16–24.","apa":"Pellicciotti, F., Carenzo, M., Helbing, J., Rimkus, S., &#38; Burlando, P. (2009). On the role of subsurface heat conduction in glacier energy-balance modelling. <i>Annals of Glaciology</i>. International Glaciological Society. <a href=\"https://doi.org/10.3189/172756409787769555\">https://doi.org/10.3189/172756409787769555</a>","mla":"Pellicciotti, Francesca, et al. “On the Role of Subsurface Heat Conduction in Glacier Energy-Balance Modelling.” <i>Annals of Glaciology</i>, vol. 50, no. 50, International Glaciological Society, 2009, pp. 16–24, doi:<a href=\"https://doi.org/10.3189/172756409787769555\">10.3189/172756409787769555</a>.","ieee":"F. Pellicciotti, M. Carenzo, J. Helbing, S. Rimkus, and P. Burlando, “On the role of subsurface heat conduction in glacier energy-balance modelling,” <i>Annals of Glaciology</i>, vol. 50, no. 50. International Glaciological Society, pp. 16–24, 2009.","chicago":"Pellicciotti, Francesca, Marco Carenzo, Jakob Helbing, Stefan Rimkus, and Paolo Burlando. “On the Role of Subsurface Heat Conduction in Glacier Energy-Balance Modelling.” <i>Annals of Glaciology</i>. International Glaciological Society, 2009. <a href=\"https://doi.org/10.3189/172756409787769555\">https://doi.org/10.3189/172756409787769555</a>.","ama":"Pellicciotti F, Carenzo M, Helbing J, Rimkus S, Burlando P. On the role of subsurface heat conduction in glacier energy-balance modelling. <i>Annals of Glaciology</i>. 2009;50(50):16-24. doi:<a href=\"https://doi.org/10.3189/172756409787769555\">10.3189/172756409787769555</a>"},"intvolume":"        50","day":"01","type":"journal_article","main_file_link":[{"url":"https://doi.org/10.3189/172756409787769555","open_access":"1"}],"date_created":"2023-02-20T08:18:40Z","doi":"10.3189/172756409787769555","status":"public","scopus_import":"1","publication_identifier":{"eissn":["1727-5644"],"issn":["0260-3055"]},"title":"On the role of subsurface heat conduction in glacier energy-balance modelling","issue":"50","abstract":[{"lang":"eng","text":"We discuss the inclusion of the subsurface heat-conduction flux into the calculation of the energy balance and ablation at the glacier–atmosphere interface. Data from automatic weather stations are used to force an energy-balance model at several locations on alpine glaciers and at one site in the dry Andes of central Chile. The heat-conduction flux is computed using a two-layer scheme, assuming that 36% of the net shortwave radiation is absorbed by the surface layer and that the rest penetrates into the snowpack. We compare simulations conducted with and without subsurface heat flux. Results show that assuming a surface temperature of zero degrees leads to a larger overestimation of melt at the sites in the accumulation area (10.4–13.3%) than in the ablation area (0.5–2.8%), due to lower air temperatures and the presence of snow. The difference between simulations with and without heat conduction is also high at the beginning and end of the ablation season (up to 29% for the first 15 days of the season), when air temperatures are lower and snow covers the glacier surface, while they are of little importance during periods of sustained melt at all the locations investigated."}],"extern":"1","author":[{"orcid":"0000-0002-5554-8087","full_name":"Pellicciotti, Francesca","id":"b28f055a-81ea-11ed-b70c-a9fe7f7b0e70","first_name":"Francesca","last_name":"Pellicciotti"},{"full_name":"Carenzo, Marco","last_name":"Carenzo","first_name":"Marco"},{"last_name":"Helbing","first_name":"Jakob","full_name":"Helbing, Jakob"},{"full_name":"Rimkus, Stefan","first_name":"Stefan","last_name":"Rimkus"},{"full_name":"Burlando, Paolo","first_name":"Paolo","last_name":"Burlando"}],"oa":1,"article_type":"original","page":"16-24","oa_version":"Published Version","_id":"12655","publication_status":"published","volume":50,"year":"2009","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_updated":"2024-10-14T12:00:29Z"},{"publist_id":"5972","date_updated":"2021-01-12T06:49:44Z","issue":"1-2","title":"Synaptic organization of lobula plate tangential cells in Drosophila: Dα7 cholinergic receptors","volume":23,"year":"2009","publication_status":"published","type":"journal_article","day":"01","status":"public","date_created":"2018-12-11T11:51:15Z","doi":"10.1080/01677060802471684","page":"200 - 209","citation":{"apa":"Raghu, S., Jösch, M. A., Sigrist, S., Borst, A., &#38; Reiff, D. (2009). Synaptic organization of lobula plate tangential cells in Drosophila: Dα7 cholinergic receptors. <i>Journal of Neurogenetics</i>. Informa Healthcare. <a href=\"https://doi.org/10.1080/01677060802471684\">https://doi.org/10.1080/01677060802471684</a>","ista":"Raghu S, Jösch MA, Sigrist S, Borst A, Reiff D. 2009. Synaptic organization of lobula plate tangential cells in Drosophila: Dα7 cholinergic receptors. Journal of Neurogenetics. 23(1–2), 200–209.","short":"S. Raghu, M.A. Jösch, S. Sigrist, A. Borst, D. Reiff, Journal of Neurogenetics 23 (2009) 200–209.","chicago":"Raghu, Shamprasad, Maximilian A Jösch, Stephan Sigrist, Alexander Borst, and Dierk Reiff. “Synaptic Organization of Lobula Plate Tangential Cells in Drosophila: Dα7 Cholinergic Receptors.” <i>Journal of Neurogenetics</i>. Informa Healthcare, 2009. <a href=\"https://doi.org/10.1080/01677060802471684\">https://doi.org/10.1080/01677060802471684</a>.","ieee":"S. Raghu, M. A. Jösch, S. Sigrist, A. Borst, and D. Reiff, “Synaptic organization of lobula plate tangential cells in Drosophila: Dα7 cholinergic receptors,” <i>Journal of Neurogenetics</i>, vol. 23, no. 1–2. Informa Healthcare, pp. 200–209, 2009.","ama":"Raghu S, Jösch MA, Sigrist S, Borst A, Reiff D. Synaptic organization of lobula plate tangential cells in Drosophila: Dα7 cholinergic receptors. <i>Journal of Neurogenetics</i>. 2009;23(1-2):200-209. doi:<a href=\"https://doi.org/10.1080/01677060802471684\">10.1080/01677060802471684</a>","mla":"Raghu, Shamprasad, et al. “Synaptic Organization of Lobula Plate Tangential Cells in Drosophila: Dα7 Cholinergic Receptors.” <i>Journal of Neurogenetics</i>, vol. 23, no. 1–2, Informa Healthcare, 2009, pp. 200–09, doi:<a href=\"https://doi.org/10.1080/01677060802471684\">10.1080/01677060802471684</a>."},"date_published":"2009-03-01T00:00:00Z","_id":"1302","intvolume":"        23","publisher":"Informa Healthcare","month":"03","publication":"Journal of Neurogenetics","author":[{"full_name":"Raghu, Shamprasad V","last_name":"Raghu","first_name":"Shamprasad"},{"last_name":"Jösch","first_name":"Maximilian A","id":"2BD278E6-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-3937-1330","full_name":"Maximilian Jösch"},{"first_name":"Stephan","last_name":"Sigrist","full_name":"Sigrist, Stephan J"},{"last_name":"Borst","first_name":"Alexander","full_name":"Borst, Alexander"},{"full_name":"Reiff, Dierk F","last_name":"Reiff","first_name":"Dierk"}],"quality_controlled":0,"abstract":[{"lang":"eng","text":"The nervous system of seeing animals derives information about optic flow in two subsequent steps. First, local motion vectors are calculated from moving retinal images, and second, the spatial distribution of these vectors is analyzed on the dendrites of large downstream neurons. In dipteran flies, this second step relies on a set of motion-sensitive lobula plate tangential cells (LPTCs), which have been studied in great detail in large fly species. Yet, studies on neurons that convey information to LPTCs and neuroanatomical investigations that enable a mechanistic understanding of the underlying dendritic computations in LPTCs are rare. We investigated the subcellular distribution of nicotinic acetylcholine receptors (nAChRs) on two sets of LPTCs: vertical system (VS) and horizontal system (HS) cells in Drosophila melanogaster. In this paper, we describe that both cell types express Dα7-type nAChR subunits specifically on higher order dendritic branches, similar to the expression of gamma aminobutyric acid (GABA) receptors. These findings support a model in which directional selectivity of LPTCs is achieved by the dendritic integration of excitatory, cholinergic, and inhibitory GABA-ergic input from local motion detectors with opposite preferred direction. Nonetheless, whole-cell recordings in mutant flies without Dα7 nAChRs revealed that direction selectivity of VS and HS cells is largely retained. In addition, mutant LPTCs were responsive to acetylcholine and remaining nAChR receptors were labeled by α-bungarotoxin. These results in LPTCs with genetically manipulated excitatory input synapses suggest a robust cellular implementation of dendritic processing that warrants direction selectivity. The underlying mechanism that ensures appropriate nAChR-mediated synaptic currents and the functional implications of separate sets or heteromultimeric nAChRs can now be addressed in this system."}],"extern":1}]