---
OA_type: closed access
_id: '3536'
abstract:
- lang: eng
  text: 'Genetic engineering of the mouse brain allows investigators to address novel
    hypotheses in vivo. Because of the paucity of information on the network patterns
    of the mouse hippocampus, we investigated the electrical patterns in the behaving
    animal using multisite silicon probes and wire tetrodes. Theta (6-9 Hz) and gamma
    (40-100 Hz) oscillations were present during exploration and rapid eye movement
    sleep. Gamma power and theta power were comodulated and gamma power varied as
    a function of the theta cycle. Pyramidal cells and putative interneurons were
    phase-locked to theta oscillations. During immobility, consummatory behaviors
    and slow-wave sleep, sharp waves were present in cornu ammonis region CA1 of the
    hippocampus stratum radiatum associated with 140-200-Hz “ripples” in the pyramidal
    cell layer and population burst of CA1 neurons. In the hilus, large-amplitude
    “dentate spikes” occurred in association with increased discharge of hilar neurons.
    The amplitude of field patterns was larger in the mouse than in the rat, likely
    reflecting the higher neuron density in a smaller brain. We suggest that the main
    hippocampal network patterns are mediated by similar pathways and mechanisms in
    mouse and rat. '
article_processing_charge: No
article_type: original
author:
- first_name: György
  full_name: Buzsáki, György
  last_name: Buzsáki
- first_name: Derek
  full_name: Buhl, Derek
  last_name: Buhl
- first_name: Kenneth
  full_name: Harris, Kenneth
  last_name: Harris
- first_name: Jozsef L
  full_name: Csicsvari, Jozsef L
  id: 3FA14672-F248-11E8-B48F-1D18A9856A87
  last_name: Csicsvari
  orcid: 0000-0002-5193-4036
- first_name: Boldizsár
  full_name: Czéh, Boldizsár
  last_name: Czéh
- first_name: Alexei
  full_name: Morozov, Alexei
  last_name: Morozov
citation:
  ama: Buzsáki G, Buhl D, Harris K, Csicsvari JL, Czéh B, Morozov A. Hippocampal network
    patterns of activity in the mouse. <i>Neuroscience</i>. 2003;116(1):201-211. doi:<a
    href="https://doi.org/10.1016/S0306-4522(02)00669-3">10.1016/S0306-4522(02)00669-3</a>
  apa: Buzsáki, G., Buhl, D., Harris, K., Csicsvari, J. L., Czéh, B., &#38; Morozov,
    A. (2003). Hippocampal network patterns of activity in the mouse. <i>Neuroscience</i>.
    Elsevier. <a href="https://doi.org/10.1016/S0306-4522(02)00669-3">https://doi.org/10.1016/S0306-4522(02)00669-3</a>
  chicago: Buzsáki, György, Derek Buhl, Kenneth Harris, Jozsef L Csicsvari, Boldizsár
    Czéh, and Alexei Morozov. “Hippocampal Network Patterns of Activity in the Mouse.”
    <i>Neuroscience</i>. Elsevier, 2003. <a href="https://doi.org/10.1016/S0306-4522(02)00669-3">https://doi.org/10.1016/S0306-4522(02)00669-3</a>.
  ieee: G. Buzsáki, D. Buhl, K. Harris, J. L. Csicsvari, B. Czéh, and A. Morozov,
    “Hippocampal network patterns of activity in the mouse,” <i>Neuroscience</i>,
    vol. 116, no. 1. Elsevier, pp. 201–211, 2003.
  ista: Buzsáki G, Buhl D, Harris K, Csicsvari JL, Czéh B, Morozov A. 2003. Hippocampal
    network patterns of activity in the mouse. Neuroscience. 116(1), 201–211.
  mla: Buzsáki, György, et al. “Hippocampal Network Patterns of Activity in the Mouse.”
    <i>Neuroscience</i>, vol. 116, no. 1, Elsevier, 2003, pp. 201–11, doi:<a href="https://doi.org/10.1016/S0306-4522(02)00669-3">10.1016/S0306-4522(02)00669-3</a>.
  short: G. Buzsáki, D. Buhl, K. Harris, J.L. Csicsvari, B. Czéh, A. Morozov, Neuroscience
    116 (2003) 201–211.
date_created: 2018-12-11T12:03:50Z
date_published: 2003-01-15T00:00:00Z
date_updated: 2026-05-20T14:29:11Z
day: '15'
doi: 10.1016/S0306-4522(02)00669-3
extern: '1'
external_id:
  pmid:
  - '12535953'
intvolume: '       116'
issue: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 201 - 211
pmid: 1
publication: Neuroscience
publication_identifier:
  eissn:
  - 1873-7544
  issn:
  - ' 0306-4522'
publication_status: published
publisher: Elsevier
publist_id: '2849'
quality_controlled: '1'
status: public
title: Hippocampal network patterns of activity in the mouse
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 116
year: '2003'
...
---
OA_place: publisher
OA_type: free access
_id: '3556'
abstract:
- lang: eng
  text: We define the Morse-Smale complex of a Morse function over a 3-manifold as
    the overlay of the descending and as- cending manifolds of all critical points.
    In the generic case, its 3-dimensional cells are shaped like crystals and are
    sepa- rated by quadrangular faces. In this paper, we give a combi- natorial algorithm
    for constructing such complexes for piece- wise linear data.
article_processing_charge: No
author:
- first_name: Herbert
  full_name: Edelsbrunner, Herbert
  id: 3FB178DA-F248-11E8-B48F-1D18A9856A87
  last_name: Edelsbrunner
  orcid: 0000-0002-9823-6833
- first_name: John
  full_name: Harer, John
  last_name: Harer
- first_name: Vijay
  full_name: Natarajan, Vijay
  last_name: Natarajan
- first_name: Valerio
  full_name: Pascucci, Valerio
  last_name: Pascucci
citation:
  ama: 'Edelsbrunner H, Harer J, Natarajan V, Pascucci V. Morse-Smale complexes for
    piecewise linear 3-manifolds. In: <i>Proceedings of the Nineteenth Annual Symposium
    in Computional Geometry</i>. Association for Computing Machinery; 2003:361-370.
    doi:<a href="https://doi.org/10.1145/777792.777846">10.1145/777792.777846</a>'
  apa: 'Edelsbrunner, H., Harer, J., Natarajan, V., &#38; Pascucci, V. (2003). Morse-Smale
    complexes for piecewise linear 3-manifolds. In <i>Proceedings of the nineteenth
    annual symposium in Computional geometry</i> (pp. 361–370). San Diego, CA, United
    States: Association for Computing Machinery. <a href="https://doi.org/10.1145/777792.777846">https://doi.org/10.1145/777792.777846</a>'
  chicago: Edelsbrunner, Herbert, John Harer, Vijay Natarajan, and Valerio Pascucci.
    “Morse-Smale Complexes for Piecewise Linear 3-Manifolds.” In <i>Proceedings of
    the Nineteenth Annual Symposium in Computional Geometry</i>, 361–70. Association
    for Computing Machinery, 2003. <a href="https://doi.org/10.1145/777792.777846">https://doi.org/10.1145/777792.777846</a>.
  ieee: H. Edelsbrunner, J. Harer, V. Natarajan, and V. Pascucci, “Morse-Smale complexes
    for piecewise linear 3-manifolds,” in <i>Proceedings of the nineteenth annual
    symposium in Computional geometry</i>, San Diego, CA, United States, 2003, pp.
    361–370.
  ista: 'Edelsbrunner H, Harer J, Natarajan V, Pascucci V. 2003. Morse-Smale complexes
    for piecewise linear 3-manifolds. Proceedings of the nineteenth annual symposium
    in Computional geometry. SCG: Symposium on Computational Geometry, 361–370.'
  mla: Edelsbrunner, Herbert, et al. “Morse-Smale Complexes for Piecewise Linear 3-Manifolds.”
    <i>Proceedings of the Nineteenth Annual Symposium in Computional Geometry</i>,
    Association for Computing Machinery, 2003, pp. 361–70, doi:<a href="https://doi.org/10.1145/777792.777846">10.1145/777792.777846</a>.
  short: H. Edelsbrunner, J. Harer, V. Natarajan, V. Pascucci, in:, Proceedings of
    the Nineteenth Annual Symposium in Computional Geometry, Association for Computing
    Machinery, 2003, pp. 361–370.
conference:
  end_date: 2003-10-26
  location: San Diego, CA, United States
  name: 'SCG: Symposium on Computational Geometry'
  start_date: 2003-08-06
date_created: 2018-12-11T12:03:57Z
date_published: 2003-06-08T00:00:00Z
date_updated: 2026-05-20T14:15:30Z
day: '08'
doi: 10.1145/777792.777846
extern: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1145/777792.777846
month: '06'
oa: 1
oa_version: Accepted Version
page: 361 - 370
publication: Proceedings of the nineteenth annual symposium in Computional geometry
publication_identifier:
  isbn:
  - '9781581136630'
publication_status: published
publisher: Association for Computing Machinery
publist_id: '2829'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Morse-Smale complexes for piecewise linear 3-manifolds
type: conference
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2003'
...
---
OA_type: closed access
_id: '3543'
abstract:
- lang: eng
  text: Both neocortical and hippocampal networks organize the firing patterns of
    their neurons by prominent oscillations during sleep, but the functional role
    of these rhythms is not well understood. Here, we show a robust correlation of
    neuronal discharges between the somatosensory cortex and hippocampus on both slow
    and fine time scales in the mouse and rat. Neuronal bursts in deep cortical layers,
    associated with sleep spindles and delta waves/slow rhythm, effectively triggered
    hippocampal discharges related to fast (ripple) oscillations. We hypothesize that
    oscillation-mediated temporal links coordinate specific information transfer between
    neocortical and hippocampal cell assemblies. Such a neocortical-hippocampal interplay
    may be important for memory consolidation.
article_processing_charge: No
article_type: original
author:
- first_name: Anton
  full_name: Sirota, Anton
  last_name: Sirota
- first_name: Jozsef L
  full_name: Csicsvari, Jozsef L
  id: 3FA14672-F248-11E8-B48F-1D18A9856A87
  last_name: Csicsvari
  orcid: 0000-0002-5193-4036
- first_name: Derek
  full_name: Buhl, Derek
  last_name: Buhl
- first_name: György
  full_name: Buzsáki, György
  last_name: Buzsáki
citation:
  ama: Sirota A, Csicsvari JL, Buhl D, Buzsáki G. Communication between neocortex
    and hippocampus during sleep in rodents. <i>PNAS</i>. 2003;100(4):2065-2069. doi:<a
    href="https://doi.org/10.1073/pnas.0437938100">10.1073/pnas.0437938100</a>
  apa: Sirota, A., Csicsvari, J. L., Buhl, D., &#38; Buzsáki, G. (2003). Communication
    between neocortex and hippocampus during sleep in rodents. <i>PNAS</i>. National
    Academy of Sciences. <a href="https://doi.org/10.1073/pnas.0437938100">https://doi.org/10.1073/pnas.0437938100</a>
  chicago: Sirota, Anton, Jozsef L Csicsvari, Derek Buhl, and György Buzsáki. “Communication
    between Neocortex and Hippocampus during Sleep in Rodents.” <i>PNAS</i>. National
    Academy of Sciences, 2003. <a href="https://doi.org/10.1073/pnas.0437938100">https://doi.org/10.1073/pnas.0437938100</a>.
  ieee: A. Sirota, J. L. Csicsvari, D. Buhl, and G. Buzsáki, “Communication between
    neocortex and hippocampus during sleep in rodents,” <i>PNAS</i>, vol. 100, no.
    4. National Academy of Sciences, pp. 2065–2069, 2003.
  ista: Sirota A, Csicsvari JL, Buhl D, Buzsáki G. 2003. Communication between neocortex
    and hippocampus during sleep in rodents. PNAS. 100(4), 2065–2069.
  mla: Sirota, Anton, et al. “Communication between Neocortex and Hippocampus during
    Sleep in Rodents.” <i>PNAS</i>, vol. 100, no. 4, National Academy of Sciences,
    2003, pp. 2065–69, doi:<a href="https://doi.org/10.1073/pnas.0437938100">10.1073/pnas.0437938100</a>.
  short: A. Sirota, J.L. Csicsvari, D. Buhl, G. Buzsáki, PNAS 100 (2003) 2065–2069.
date_created: 2018-12-11T12:03:53Z
date_published: 2003-02-18T00:00:00Z
date_updated: 2026-05-20T14:20:24Z
day: '18'
doi: 10.1073/pnas.0437938100
extern: '1'
external_id:
  pmid:
  - '12576550'
intvolume: '       100'
issue: '4'
language:
- iso: eng
month: '02'
oa_version: None
page: 2065 - 2069
pmid: 1
publication: PNAS
publication_identifier:
  eissn:
  - 1091-6490
  issn:
  - 0027-8424
publication_status: published
publisher: National Academy of Sciences
publist_id: '2841'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Communication between neocortex and hippocampus during sleep in rodents
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 100
year: '2003'
...
---
OA_place: publisher
OA_type: free access
_id: '3528'
abstract:
- lang: eng
  text: Gamma frequency oscillations (30-100 Hz) have been suggested to underlie various
    cognitive and motor functions. Here, we examine the generation of gamma oscillation
    currents in the hippocampus, using two-dimensional, 96-site silicon probes. Two
    gamma generators were identified, one in the dentate gyrus and another in the
    CA3-CA1 regions. The coupling strength between the two oscillators varied during
    both theta and nontheta states. Both pyramidal cells and interneurons were phase-locked
    to gamma waves. Anatomical connectivity, rather than physical distance, determined
    the coupling strength of the oscillating neurons. CA3 pyramidal neurons discharged
    CA3 and CA1 interneurons at latencies indicative of monosynaptic connections.
    Intrahippocampal gamma oscillation emerges in the CA3 recurrent system, which
    entrains the CA1 region via its interneurons.
article_processing_charge: No
article_type: original
author:
- first_name: Jozsef L
  full_name: Csicsvari, Jozsef L
  id: 3FA14672-F248-11E8-B48F-1D18A9856A87
  last_name: Csicsvari
  orcid: 0000-0002-5193-4036
- first_name: Brian
  full_name: Jamieson, Brian
  last_name: Jamieson
- first_name: Kensall
  full_name: Wise, Kensall
  last_name: Wise
- first_name: György
  full_name: Buzsáki, György
  last_name: Buzsáki
citation:
  ama: Csicsvari JL, Jamieson B, Wise K, Buzsáki G. Mechanisms of gamma oscillations
    in the hippocampus of the behaving rat. <i>Neuron</i>. 2003;37(2):311-322. doi:<a
    href="https://doi.org/10.1016/S0896-6273(02)01169-8">10.1016/S0896-6273(02)01169-8</a>
  apa: Csicsvari, J. L., Jamieson, B., Wise, K., &#38; Buzsáki, G. (2003). Mechanisms
    of gamma oscillations in the hippocampus of the behaving rat. <i>Neuron</i>. Elsevier.
    <a href="https://doi.org/10.1016/S0896-6273(02)01169-8">https://doi.org/10.1016/S0896-6273(02)01169-8</a>
  chicago: Csicsvari, Jozsef L, Brian Jamieson, Kensall Wise, and György Buzsáki.
    “Mechanisms of Gamma Oscillations in the Hippocampus of the Behaving Rat.” <i>Neuron</i>.
    Elsevier, 2003. <a href="https://doi.org/10.1016/S0896-6273(02)01169-8">https://doi.org/10.1016/S0896-6273(02)01169-8</a>.
  ieee: J. L. Csicsvari, B. Jamieson, K. Wise, and G. Buzsáki, “Mechanisms of gamma
    oscillations in the hippocampus of the behaving rat,” <i>Neuron</i>, vol. 37,
    no. 2. Elsevier, pp. 311–322, 2003.
  ista: Csicsvari JL, Jamieson B, Wise K, Buzsáki G. 2003. Mechanisms of gamma oscillations
    in the hippocampus of the behaving rat. Neuron. 37(2), 311–322.
  mla: Csicsvari, Jozsef L., et al. “Mechanisms of Gamma Oscillations in the Hippocampus
    of the Behaving Rat.” <i>Neuron</i>, vol. 37, no. 2, Elsevier, 2003, pp. 311–22,
    doi:<a href="https://doi.org/10.1016/S0896-6273(02)01169-8">10.1016/S0896-6273(02)01169-8</a>.
  short: J.L. Csicsvari, B. Jamieson, K. Wise, G. Buzsáki, Neuron 37 (2003) 311–322.
date_created: 2018-12-11T12:03:48Z
date_published: 2003-01-01T00:00:00Z
date_updated: 2026-05-21T07:50:07Z
day: '01'
doi: 10.1016/S0896-6273(02)01169-8
extern: '1'
external_id:
  unknown:
  - '12546825'
intvolume: '        37'
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1016/S0896-6273(02)01169-8
month: '01'
oa: 1
oa_version: Published Version
page: 311 - 322
publication: Neuron
publication_identifier:
  eissn:
  - 1097-4199
  issn:
  - 0896-6273
publication_status: published
publisher: Elsevier
publist_id: '2857'
quality_controlled: '1'
status: public
title: Mechanisms of gamma oscillations in the hippocampus of the behaving rat
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 37
year: '2003'
...
---
OA_type: closed access
_id: '3458'
article_processing_charge: No
author:
- first_name: Peter M
  full_name: Jonas, Peter M
  id: 353C1B58-F248-11E8-B48F-1D18A9856A87
  last_name: Jonas
  orcid: 0000-0001-5001-4804
- first_name: Klaus
  full_name: Unsicker, Klaus
  last_name: Unsicker
citation:
  ama: 'Jonas PM, Unsicker K. Molekulare und zelluläre Grundlagen des Nervensystems.
    In: Schmidt R, ed. <i>Lehrbuch Vorklinik</i>. Vol B. Deutscher Ärzteverlag; 2003:3-26.'
  apa: Jonas, P. M., &#38; Unsicker, K. (2003). Molekulare und zelluläre Grundlagen
    des Nervensystems. In R. Schmidt (Ed.), <i>Lehrbuch Vorklinik</i> (Vol. B, pp.
    3–26). Deutscher Ärzteverlag.
  chicago: Jonas, Peter M, and Klaus Unsicker. “Molekulare und zelluläre Grundlagen
    des Nervensystems.” In <i>Lehrbuch Vorklinik</i>, edited by R. Schmidt, B:3–26.
    Deutscher Ärzteverlag, 2003.
  ieee: P. M. Jonas and K. Unsicker, “Molekulare und zelluläre Grundlagen des Nervensystems,”
    in <i>Lehrbuch Vorklinik</i>, vol. B, R. Schmidt, Ed. Deutscher Ärzteverlag, 2003,
    pp. 3–26.
  ista: 'Jonas PM, Unsicker K. 2003.Molekulare und zelluläre Grundlagen des Nervensystems.
    In: Lehrbuch Vorklinik. vol. B, 3–26.'
  mla: Jonas, Peter M., and Klaus Unsicker. “Molekulare und zelluläre Grundlagen des
    Nervensystems.” <i>Lehrbuch Vorklinik</i>, edited by R. Schmidt, vol. B, Deutscher
    Ärzteverlag, 2003, pp. 3–26.
  short: P.M. Jonas, K. Unsicker, in:, R. Schmidt (Ed.), Lehrbuch Vorklinik, Deutscher
    Ärzteverlag, 2003, pp. 3–26.
date_created: 2018-12-11T12:03:26Z
date_published: 2003-04-01T00:00:00Z
date_updated: 2026-05-21T08:48:31Z
day: '01'
editor:
- first_name: R.
  full_name: Schmidt, R.
  last_name: Schmidt
extern: '1'
language:
- iso: ger
month: '04'
oa_version: None
page: 3 - 26
publication: Lehrbuch Vorklinik
publication_identifier:
  isbn:
  - '9783769104431'
publication_status: published
publisher: Deutscher Ärzteverlag
publist_id: '2929'
status: public
title: Molekulare und zelluläre Grundlagen des Nervensystems
type: book_chapter
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: B
year: '2003'
...
---
OA_type: closed access
_id: '3425'
abstract:
- lang: eng
  text: 'Recent observations of the polarization of the light emitted by supernova
    explo-sions indicate that there are large deviations from spherical symmetry in
    the very heart of these explosions. Asymmetries may well play a key role in the
    explosion mechanism. So far there is no convincing theoretical explanation for
    these observations. In this work the impact of angular momentum on the core collapse
    which is possibly the origin of large asymmetries is studied. We introduce a new
    approach to the supernova problem: a three dimensional test particle based simulation.
    The infall phase of the collapse of a typical iron core is investigated using
    numerical calculations. Our main focus is the impact of angular momentum. Significant
    deviations from spherical symmetry are found for rapidly rotating supernova cores.'
alternative_title:
- Nato Science Series II
article_processing_charge: No
author:
- first_name: Mark Tobias
  full_name: Bollenbach, Mark Tobias
  id: 3E6DB97A-F248-11E8-B48F-1D18A9856A87
  last_name: Bollenbach
  orcid: 0000-0003-4398-476X
- first_name: T.
  full_name: Strother, T.
  last_name: Strother
- first_name: Wolfgang
  full_name: Bauer, Wolfgang
  last_name: Bauer
citation:
  ama: 'Bollenbach MT, Strother T, Bauer W. 3D supernova collapse calculations. In:
    Vol 166. Springer Nature; 2003:277-288. doi:<a href="https://doi.org/10.1007/978-1-4020-2705-5_21">10.1007/978-1-4020-2705-5_21</a>'
  apa: Bollenbach, M. T., Strother, T., &#38; Bauer, W. (2003). 3D supernova collapse
    calculations (Vol. 166, pp. 277–288). Presented at the NATO ASI on Structure and
    Dynamics of Elementary Matter, Springer Nature. <a href="https://doi.org/10.1007/978-1-4020-2705-5_21">https://doi.org/10.1007/978-1-4020-2705-5_21</a>
  chicago: Bollenbach, Mark Tobias, T. Strother, and Wolfgang Bauer. “3D Supernova
    Collapse Calculations,” 166:277–88. Springer Nature, 2003. <a href="https://doi.org/10.1007/978-1-4020-2705-5_21">https://doi.org/10.1007/978-1-4020-2705-5_21</a>.
  ieee: M. T. Bollenbach, T. Strother, and W. Bauer, “3D supernova collapse calculations,”
    presented at the NATO ASI on Structure and Dynamics of Elementary Matter, 2003,
    vol. 166, pp. 277–288.
  ista: Bollenbach MT, Strother T, Bauer W. 2003. 3D supernova collapse calculations.
    NATO ASI on Structure and Dynamics of Elementary Matter, Nato Science Series II,
    vol. 166, 277–288.
  mla: Bollenbach, Mark Tobias, et al. <i>3D Supernova Collapse Calculations</i>.
    Vol. 166, Springer Nature, 2003, pp. 277–88, doi:<a href="https://doi.org/10.1007/978-1-4020-2705-5_21">10.1007/978-1-4020-2705-5_21</a>.
  short: M.T. Bollenbach, T. Strother, W. Bauer, in:, Springer Nature, 2003, pp. 277–288.
conference:
  name: NATO ASI on Structure and Dynamics of Elementary Matter
date_created: 2018-12-11T12:03:16Z
date_published: 2003-01-01T00:00:00Z
date_updated: 2026-05-21T11:46:24Z
day: '01'
doi: 10.1007/978-1-4020-2705-5_21
extern: '1'
intvolume: '       166'
language:
- iso: eng
month: '01'
oa_version: None
page: 277 - 288
publication_identifier:
  eisbn:
  - '9781402027055'
  isbn:
  - '9781402024467'
publication_status: published
publisher: Springer Nature
publist_id: '2976'
quality_controlled: '1'
status: public
title: 3D supernova collapse calculations
type: conference
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 166
year: '2003'
...
---
OA_place: repository
OA_type: hybrid
_id: '3210'
abstract:
- lang: eng
  text: 'Luby and Rackoff showed how to construct a (super-)pseudo-random permutation
    {0,1}2n→ {0,1}2n from some number r of pseudo-random functions {0,1}n → {0,1}n.
    Their construction, motivated by DES, consists of a cascade of r Feistel permutations.
    A Feistel permutation 1for a pseudo-random function f is defined as (L, R) → (R,L
    ⊕ f (R)), where L and R are the left and right part of the input and ⊕ denotes
    bitwise XOR or, in this paper, any other group operation on {0,1}n. The only non-trivial
    step of the security proof consists of proving that the cascade of r Feistel permutations
    with independent uniform random functions {0,1}n → {0,1}n, denoted Ψ2nr is indistinguishable
    from a uniform random permutation {0,1}2n → {0,1}2n by any computationally unbounded
    adaptive distinguisher making at most O(2cn) combined chosen plaintext/ciphertext
    queries for any c &lt; α, where a is a security parameter. Luby and Rackoff proved
    α = 1/2 for r = 4. A natural problem, proposed by Pieprzyk is to improve on α
    for larger r. The best known result, α = 3/4 for r = 6, is due to Patarin. In
    this paper we prove a = 1 -O(1/r), i.e., the trivial upper bound α = 1 can be
    approached. The proof uses some new techniques that can be of independent interest. '
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Ueli
  full_name: Maurer, Ueli
  last_name: Maurer
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
citation:
  ama: 'Maurer U, Pietrzak KZ. The security of many round Luby Rackoff pseudo random
    permutations. In: Vol 2656. Springer Nature; 2003:544-561. doi:<a href="https://doi.org/10.1007/3-540-39200-9_34">10.1007/3-540-39200-9_34</a>'
  apa: 'Maurer, U., &#38; Pietrzak, K. Z. (2003). The security of many round Luby
    Rackoff pseudo random permutations (Vol. 2656, pp. 544–561). Presented at the
    EUROCRYPT: Theory and Applications of Cryptographic Techniques, Warschau, Polen:
    Springer Nature. <a href="https://doi.org/10.1007/3-540-39200-9_34">https://doi.org/10.1007/3-540-39200-9_34</a>'
  chicago: Maurer, Ueli, and Krzysztof Z Pietrzak. “The Security of Many Round Luby
    Rackoff Pseudo Random Permutations,” 2656:544–61. Springer Nature, 2003. <a href="https://doi.org/10.1007/3-540-39200-9_34">https://doi.org/10.1007/3-540-39200-9_34</a>.
  ieee: 'U. Maurer and K. Z. Pietrzak, “The security of many round Luby Rackoff pseudo
    random permutations,” presented at the EUROCRYPT: Theory and Applications of Cryptographic
    Techniques, Warschau, Polen, 2003, vol. 2656, pp. 544–561.'
  ista: 'Maurer U, Pietrzak KZ. 2003. The security of many round Luby Rackoff pseudo
    random permutations. EUROCRYPT: Theory and Applications of Cryptographic Techniques,
    LNCS, vol. 2656, 544–561.'
  mla: Maurer, Ueli, and Krzysztof Z. Pietrzak. <i>The Security of Many Round Luby
    Rackoff Pseudo Random Permutations</i>. Vol. 2656, Springer Nature, 2003, pp.
    544–61, doi:<a href="https://doi.org/10.1007/3-540-39200-9_34">10.1007/3-540-39200-9_34</a>.
  short: U. Maurer, K.Z. Pietrzak, in:, Springer Nature, 2003, pp. 544–561.
conference:
  end_date: 2003-05-08
  location: Warschau, Polen
  name: 'EUROCRYPT: Theory and Applications of Cryptographic Techniques'
  start_date: 2003-05-04
date_created: 2018-12-11T12:02:02Z
date_published: 2003-06-04T00:00:00Z
date_updated: 2026-05-21T12:04:42Z
day: '04'
doi: 10.1007/3-540-39200-9_34
extern: '1'
intvolume: '      2656'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://crypto-test.ethz.ch/publications/files/MauPie03.pdf
month: '06'
oa: 1
oa_version: Preprint
page: 544 - 561
publication_identifier:
  isbn:
  - '9783540140399'
  - '9783540392002'
publication_status: published
publisher: Springer Nature
publist_id: '3473'
quality_controlled: '1'
status: public
title: The security of many round Luby Rackoff pseudo random permutations
type: conference
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 2656
year: '2003'
...
---
OA_place: publisher
OA_type: free access
_id: '3209'
abstract:
- lang: eng
  text: We show that the fixed alphabet shortest common supersequence (SCS) and the
    fixed alphabet longest common subsequence (LCS) problems parameterized in the
    number of strings are W[1]-hard. Unless W[1]=FPT, this rules out the existence
    of algorithms with time complexity of O(f(k)nα) for those problems. Here n is
    the size of the problem instance, α is constant, k is the number of strings and
    f is any function of k. The fixed alphabet version of the LCS problem is of particular
    interest considering the importance of sequence comparison (e.g. multiple sequence
    alignment) in the fixed length alphabet world of DNA and protein sequences.
article_processing_charge: No
article_type: original
author:
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
citation:
  ama: Pietrzak KZ. On the parameterized complexity of the fixed alphabet shortest
    common supersequence and longest common subsequence problems. <i>Journal of Computer
    and System Sciences</i>. 2003;67(4):757-771. doi:<a href="https://doi.org/10.1016/S0022-0000(03)00078-3">10.1016/S0022-0000(03)00078-3</a>
  apa: Pietrzak, K. Z. (2003). On the parameterized complexity of the fixed alphabet
    shortest common supersequence and longest common subsequence problems. <i>Journal
    of Computer and System Sciences</i>. Elsevier. <a href="https://doi.org/10.1016/S0022-0000(03)00078-3">https://doi.org/10.1016/S0022-0000(03)00078-3</a>
  chicago: Pietrzak, Krzysztof Z. “On the Parameterized Complexity of the Fixed Alphabet
    Shortest Common Supersequence and Longest Common Subsequence Problems.” <i>Journal
    of Computer and System Sciences</i>. Elsevier, 2003. <a href="https://doi.org/10.1016/S0022-0000(03)00078-3">https://doi.org/10.1016/S0022-0000(03)00078-3</a>.
  ieee: K. Z. Pietrzak, “On the parameterized complexity of the fixed alphabet shortest
    common supersequence and longest common subsequence problems,” <i>Journal of Computer
    and System Sciences</i>, vol. 67, no. 4. Elsevier, pp. 757–771, 2003.
  ista: Pietrzak KZ. 2003. On the parameterized complexity of the fixed alphabet shortest
    common supersequence and longest common subsequence problems. Journal of Computer
    and System Sciences. 67(4), 757–771.
  mla: Pietrzak, Krzysztof Z. “On the Parameterized Complexity of the Fixed Alphabet
    Shortest Common Supersequence and Longest Common Subsequence Problems.” <i>Journal
    of Computer and System Sciences</i>, vol. 67, no. 4, Elsevier, 2003, pp. 757–71,
    doi:<a href="https://doi.org/10.1016/S0022-0000(03)00078-3">10.1016/S0022-0000(03)00078-3</a>.
  short: K.Z. Pietrzak, Journal of Computer and System Sciences 67 (2003) 757–771.
date_created: 2018-12-11T12:02:01Z
date_published: 2003-12-01T00:00:00Z
date_updated: 2026-05-21T11:50:33Z
day: '01'
doi: 10.1016/S0022-0000(03)00078-3
extern: '1'
intvolume: '        67'
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1016/S0022-0000(03)00078-3
month: '12'
oa: 1
oa_version: Accepted Version
page: 757 - 771
publication: Journal of Computer and System Sciences
publication_status: published
publisher: Elsevier
publist_id: '3472'
quality_controlled: '1'
status: public
title: On the parameterized complexity of the fixed alphabet shortest common supersequence
  and longest common subsequence problems
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 67
year: '2003'
...
---
OA_place: repository
OA_type: green
_id: '3171'
abstract:
- lang: eng
  text: 'Reconstructing a 3-D scene from more than one camera is a classical problem
    in computer vision. One of the major sources of difficulty is the fact that not
    all scene elements are visible from all cameras. In the last few years, two promising
    approaches have been developed 11,12 that formulate the scene reconstruction problem
    in terms of energy minimization, and minimize the energy using graph cuts. These
    energy minimization approaches treat the input images symmetrically, handle visibility
    constraints correctly, and allow spatial smoothness to be enforced. However, these
    algorithm propose different problem formulations, and handle a limited class of
    smoothness terms. One algorithm 11 uses a problem formulation that is restricted
    to two-camera stereo, and imposes smoothness between a pair of cameras. The other
    algorithm 12 can handle an arbitrary number of cameras, but imposes smoothness
    only with respect to a single camera. In this paper we give a more general energy
    minimization formulation for the problem, which allows a larger class of spatial
    smoothness constraints. We show that our formulation includes both of the previous
    approaches as special cases, as well as permitting new energy functions. Experimental
    results on real data with ground truth are also included. '
alternative_title:
- Energy Minimization Methods in Computer Vision and Pattern Recognition
article_processing_charge: No
author:
- first_name: Vladimir
  full_name: Kolmogorov, Vladimir
  id: 3D50B0BA-F248-11E8-B48F-1D18A9856A87
  last_name: Kolmogorov
- first_name: Ramin
  full_name: Zabih, Ramin
  last_name: Zabih
- first_name: Steven
  full_name: Gortler, Steven
  last_name: Gortler
citation:
  ama: 'Kolmogorov V, Zabih R, Gortler S. Generalized multi camera scene reconstruction
    using graph cuts. In: <i>4th International Workshop</i>. Vol 2683. Springer Nature;
    2003:501-516. doi:<a href="https://doi.org/10.1007/978-3-540-45063-4_32">10.1007/978-3-540-45063-4_32</a>'
  apa: 'Kolmogorov, V., Zabih, R., &#38; Gortler, S. (2003). Generalized multi camera
    scene reconstruction using graph cuts. In <i>4th International Workshop</i> (Vol.
    2683, pp. 501–516). Lisbon, Portugal: Springer Nature. <a href="https://doi.org/10.1007/978-3-540-45063-4_32">https://doi.org/10.1007/978-3-540-45063-4_32</a>'
  chicago: Kolmogorov, Vladimir, Ramin Zabih, and Steven Gortler. “Generalized Multi
    Camera Scene Reconstruction Using Graph Cuts.” In <i>4th International Workshop</i>,
    2683:501–16. Springer Nature, 2003. <a href="https://doi.org/10.1007/978-3-540-45063-4_32">https://doi.org/10.1007/978-3-540-45063-4_32</a>.
  ieee: V. Kolmogorov, R. Zabih, and S. Gortler, “Generalized multi camera scene reconstruction
    using graph cuts,” in <i>4th International Workshop</i>, Lisbon, Portugal, 2003,
    vol. 2683, pp. 501–516.
  ista: 'Kolmogorov V, Zabih R, Gortler S. 2003. Generalized multi camera scene reconstruction
    using graph cuts. 4th International Workshop. EMMCVPR: Energy Minimization Methods
    in Computer Vision and Pattern Recognition, Energy Minimization Methods in Computer
    Vision and Pattern Recognition, vol. 2683, 501–516.'
  mla: Kolmogorov, Vladimir, et al. “Generalized Multi Camera Scene Reconstruction
    Using Graph Cuts.” <i>4th International Workshop</i>, vol. 2683, Springer Nature,
    2003, pp. 501–16, doi:<a href="https://doi.org/10.1007/978-3-540-45063-4_32">10.1007/978-3-540-45063-4_32</a>.
  short: V. Kolmogorov, R. Zabih, S. Gortler, in:, 4th International Workshop, Springer
    Nature, 2003, pp. 501–516.
conference:
  end_date: 2003-07-09
  location: Lisbon, Portugal
  name: 'EMMCVPR: Energy Minimization Methods in Computer Vision and Pattern Recognition'
  start_date: 2003-07-07
date_created: 2018-12-11T12:01:48Z
date_published: 2003-06-26T00:00:00Z
date_updated: 2026-05-21T13:04:17Z
day: '26'
doi: 10.1007/978-3-540-45063-4_32
extern: '1'
intvolume: '      2683'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.cs.cornell.edu/~rdz/Papers/KZG-EMMCVPR03.pdf
month: '06'
oa: 1
oa_version: Preprint
page: 501 - 516
publication: 4th International Workshop
publication_identifier:
  eisbn:
  - '9783540450634'
  isbn:
  - '9783540404989'
publication_status: published
publisher: Springer Nature
publist_id: '3512'
quality_controlled: '1'
status: public
title: Generalized multi camera scene reconstruction using graph cuts
type: conference
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 2683
year: '2003'
...
---
OA_type: closed access
_id: '3150'
abstract:
- lang: eng
  text: Tripartite G-protein-coupled receptors (GPCRs) represent one of the largest
    groups of signal transducers, transmitting signals from hormones, neuropeptides,
    odorants, food and light. Ligand-bound receptors catalyse GDP/GTP exchange on
    the G-protein α-subunit (Gα), leading to α-GTP separation from the βγ subunits
    and pathway activation. Activating mutations in the receptors or G proteins underlie
    many human diseases, including some cancers, dwarfism and premature puberty. Regulators
    of G-protein signalling (RGS proteins) are known to modulate the level and duration
    of ligand-induced signalling by accelerating the intrinsic GTPase activity of
    the Gα subunit, and thus reformation of the inactive GDP-bound Gα. Here we find
    that even in the absence of receptor, mutation of the RGS family member Sst2 (refs
    6-9) permits spontaneous activation of the G-protein-coupled mating pathway in
    Saccharomyces cerevisiae at levels normally seen only in the presence of ligand.
    Our work demonstrates the occurence of spontaneous tripartite G-protein signalling
    in vivo and identifies a requirement for RGS proteins in preventing such receptor-independent
    activation.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Daria E
  full_name: Siekhaus, Daria E
  id: 3D224B9E-F248-11E8-B48F-1D18A9856A87
  last_name: Siekhaus
  orcid: 0000-0001-8323-8353
- first_name: David
  full_name: Drubin, David
  last_name: Drubin
citation:
  ama: Siekhaus DE, Drubin D. Spontaneous receptor-independent heterotrimeric G-protein
    signalling in an RGS mutant. <i>Nature Cell Biology</i>. 2003;5(3):231-235. doi:<a
    href="https://doi.org/10.1038/ncb941">10.1038/ncb941</a>
  apa: Siekhaus, D. E., &#38; Drubin, D. (2003). Spontaneous receptor-independent
    heterotrimeric G-protein signalling in an RGS mutant. <i>Nature Cell Biology</i>.
    Springer Nature. <a href="https://doi.org/10.1038/ncb941">https://doi.org/10.1038/ncb941</a>
  chicago: Siekhaus, Daria E, and David Drubin. “Spontaneous Receptor-Independent
    Heterotrimeric G-Protein Signalling in an RGS Mutant.” <i>Nature Cell Biology</i>.
    Springer Nature, 2003. <a href="https://doi.org/10.1038/ncb941">https://doi.org/10.1038/ncb941</a>.
  ieee: D. E. Siekhaus and D. Drubin, “Spontaneous receptor-independent heterotrimeric
    G-protein signalling in an RGS mutant,” <i>Nature Cell Biology</i>, vol. 5, no.
    3. Springer Nature, pp. 231–235, 2003.
  ista: Siekhaus DE, Drubin D. 2003. Spontaneous receptor-independent heterotrimeric
    G-protein signalling in an RGS mutant. Nature Cell Biology. 5(3), 231–235.
  mla: Siekhaus, Daria E., and David Drubin. “Spontaneous Receptor-Independent Heterotrimeric
    G-Protein Signalling in an RGS Mutant.” <i>Nature Cell Biology</i>, vol. 5, no.
    3, Springer Nature, 2003, pp. 231–35, doi:<a href="https://doi.org/10.1038/ncb941">10.1038/ncb941</a>.
  short: D.E. Siekhaus, D. Drubin, Nature Cell Biology 5 (2003) 231–235.
date_created: 2018-12-11T12:01:41Z
date_published: 2003-03-01T00:00:00Z
date_updated: 2026-05-21T13:51:51Z
day: '01'
doi: 10.1038/ncb941
extern: '1'
external_id:
  pmid:
  - '12598904 '
intvolume: '         5'
issue: '3'
language:
- iso: eng
month: '03'
oa_version: None
page: 231 - 235
pmid: 1
publication: Nature Cell Biology
publication_identifier:
  eissn:
  - 1476-4679
  issn:
  - 1465-7392
publication_status: published
publisher: Springer Nature
publist_id: '3544'
quality_controlled: '1'
status: public
title: Spontaneous receptor-independent heterotrimeric G-protein signalling in an
  RGS mutant
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 5
year: '2003'
...
---
OA_type: closed access
_id: '3151'
abstract:
- lang: eng
  text: Biosynthesis of most peptide hormones and neuropeptides requires proteolytic
    excision of the active peptide from inactive proprotein precursors, an activity
    carried out by subtilisin-like proprotein convertases (SPCs) in constitutive or
    regulated secretory pathways. The Drosophila amontillado (amon) gene encodes a
    homolog of the mammalian PC2 protein, an SPC that functions in the regulated secretory
    pathway in neuroendocrine tissues. We have identified amon mutants by isolating
    ethylmethanesulfonate (EMS)-induced lethal and visible mutations that define two
    complementation groups in the amon interval at 97D1 of the third chromosome. DNA
    sequencing identified the amon complementation group and the DNA sequence change
    for each of the nine amon alleles isolated. amon mutants display partial embryonic
    lethality, are defective in larval growth, and arrest during the first to second
    instar larval molt. Mutant larvae can be rescued by heat-shock-induced expression
    of the amon protein. Rescued larvae arrest at the subsequent larval molt, suggesting
    that amon is also required for the second to third instar larval molt. Our data
    indicate that the amon proprotein convertase is required during embryogenesis
    and larval development in Drosophila and support the hypothesis that AMON acts
    to proteolytically process peptide hormones that regulate hatching, larval growth,
    and larval ecdysis.
article_processing_charge: No
article_type: original
author:
- first_name: Lowell
  full_name: Rayburn, Lowell
  last_name: Rayburn
- first_name: Holly
  full_name: Gooding, Holly
  last_name: Gooding
- first_name: Semil
  full_name: Choksi, Semil
  last_name: Choksi
- first_name: Dhea
  full_name: Maloney, Dhea
  last_name: Maloney
- first_name: Ambrose
  full_name: Kidd, Ambrose
  last_name: Kidd
- first_name: Daria E
  full_name: Siekhaus, Daria E
  id: 3D224B9E-F248-11E8-B48F-1D18A9856A87
  last_name: Siekhaus
  orcid: 0000-0001-8323-8353
- first_name: Michael
  full_name: Bender, Michael
  last_name: Bender
citation:
  ama: Rayburn L, Gooding H, Choksi S, et al. Amontillado, the Drosophila homolog
    of the prohormone processing protease PC2, is required during embryogenesis and
    early larval development. <i>Genetics</i>. 2003;163(1):227-237. doi:<a href="https://doi.org/10.1093/genetics/163.1.227">10.1093/genetics/163.1.227</a>
  apa: Rayburn, L., Gooding, H., Choksi, S., Maloney, D., Kidd, A., Siekhaus, D. E.,
    &#38; Bender, M. (2003). Amontillado, the Drosophila homolog of the prohormone
    processing protease PC2, is required during embryogenesis and early larval development.
    <i>Genetics</i>. Oxford Academic. <a href="https://doi.org/10.1093/genetics/163.1.227">https://doi.org/10.1093/genetics/163.1.227</a>
  chicago: Rayburn, Lowell, Holly Gooding, Semil Choksi, Dhea Maloney, Ambrose Kidd,
    Daria E Siekhaus, and Michael Bender. “Amontillado, the Drosophila Homolog of
    the Prohormone Processing Protease PC2, Is Required during Embryogenesis and Early
    Larval Development.” <i>Genetics</i>. Oxford Academic, 2003. <a href="https://doi.org/10.1093/genetics/163.1.227">https://doi.org/10.1093/genetics/163.1.227</a>.
  ieee: L. Rayburn <i>et al.</i>, “Amontillado, the Drosophila homolog of the prohormone
    processing protease PC2, is required during embryogenesis and early larval development,”
    <i>Genetics</i>, vol. 163, no. 1. Oxford Academic, pp. 227–237, 2003.
  ista: Rayburn L, Gooding H, Choksi S, Maloney D, Kidd A, Siekhaus DE, Bender M.
    2003. Amontillado, the Drosophila homolog of the prohormone processing protease
    PC2, is required during embryogenesis and early larval development. Genetics.
    163(1), 227–237.
  mla: Rayburn, Lowell, et al. “Amontillado, the Drosophila Homolog of the Prohormone
    Processing Protease PC2, Is Required during Embryogenesis and Early Larval Development.”
    <i>Genetics</i>, vol. 163, no. 1, Oxford Academic, 2003, pp. 227–37, doi:<a href="https://doi.org/10.1093/genetics/163.1.227">10.1093/genetics/163.1.227</a>.
  short: L. Rayburn, H. Gooding, S. Choksi, D. Maloney, A. Kidd, D.E. Siekhaus, M.
    Bender, Genetics 163 (2003) 227–237.
date_created: 2018-12-11T12:01:41Z
date_published: 2003-01-01T00:00:00Z
date_updated: 2026-05-22T08:38:04Z
day: '01'
doi: 10.1093/genetics/163.1.227
extern: '1'
external_id:
  pmid:
  - '12586710'
intvolume: '       163'
issue: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 227 - 237
pmid: 1
publication: Genetics
publication_identifier:
  eissn:
  - 1943-2631
  issn:
  - 0016-6731
publication_status: published
publisher: Oxford Academic
publist_id: '3545'
quality_controlled: '1'
status: public
title: Amontillado, the Drosophila homolog of the prohormone processing protease PC2,
  is required during embryogenesis and early larval development
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 163
year: '2003'
...
---
OA_place: publisher
OA_type: free access
_id: '2996'
abstract:
- lang: eng
  text: "Plants, compared to animals, exhibit an amazing adaptability and plasticity
    in their development. This is largely dependent on the ability of plants to form
    new organs, such as lateral roots, leaves, and flowers during postembryonic development.
    Organ primordia develop from founder cell populations into organs by coordinated
    cell division and differentiation. Here, we show that organ formation in Arabidopsis
    involves dynamic gradients of the signaling molecule auxin with maxima at the
    primordia tips. These gradients are mediated by cellular efflux requiring asymmetrically
    localized PIN proteins, which represent a functionally redundant network for auxin
    distribution in both aerial and underground organs. PIN1 polar localization undergoes
    a dynamic rearrangement, which correlates with establishment of auxin gradients
    and primordium development. Our results suggest that PIN-dependent, local auxin
    gradients represent a common module for formation of all plant organs, regardless
    of their mature morphology or developmental origin.\r\n"
article_processing_charge: No
article_type: original
author:
- first_name: Eva
  full_name: Benková, Eva
  id: 38F4F166-F248-11E8-B48F-1D18A9856A87
  last_name: Benková
  orcid: 0000-0002-8510-9739
- first_name: Marta
  full_name: Michniewicz, Marta
  last_name: Michniewicz
- first_name: Michael
  full_name: Sauer, Michael
  last_name: Sauer
- first_name: Thomas
  full_name: Teichmann, Thomas
  last_name: Teichmann
- first_name: Daniela
  full_name: Seifertová, Daniela
  last_name: Seifertová
- first_name: Gerd
  full_name: Jürgens, Gerd
  last_name: Jürgens
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Benková E, Michniewicz M, Sauer M, et al. Local, efflux-dependent auxin gradients
    as a common module for plant organ formation. <i>Cell</i>. 2003;115(5):591-602.
    doi:<a href="https://doi.org/10.1016/S0092-8674(03)00924-3">10.1016/S0092-8674(03)00924-3</a>
  apa: Benková, E., Michniewicz, M., Sauer, M., Teichmann, T., Seifertová, D., Jürgens,
    G., &#38; Friml, J. (2003). Local, efflux-dependent auxin gradients as a common
    module for plant organ formation. <i>Cell</i>. Cell Press. <a href="https://doi.org/10.1016/S0092-8674(03)00924-3">https://doi.org/10.1016/S0092-8674(03)00924-3</a>
  chicago: Benková, Eva, Marta Michniewicz, Michael Sauer, Thomas Teichmann, Daniela
    Seifertová, Gerd Jürgens, and Jiří Friml. “Local, Efflux-Dependent Auxin Gradients
    as a Common Module for Plant Organ Formation.” <i>Cell</i>. Cell Press, 2003.
    <a href="https://doi.org/10.1016/S0092-8674(03)00924-3">https://doi.org/10.1016/S0092-8674(03)00924-3</a>.
  ieee: E. Benková <i>et al.</i>, “Local, efflux-dependent auxin gradients as a common
    module for plant organ formation,” <i>Cell</i>, vol. 115, no. 5. Cell Press, pp.
    591–602, 2003.
  ista: Benková E, Michniewicz M, Sauer M, Teichmann T, Seifertová D, Jürgens G, Friml
    J. 2003. Local, efflux-dependent auxin gradients as a common module for plant
    organ formation. Cell. 115(5), 591–602.
  mla: Benková, Eva, et al. “Local, Efflux-Dependent Auxin Gradients as a Common Module
    for Plant Organ Formation.” <i>Cell</i>, vol. 115, no. 5, Cell Press, 2003, pp.
    591–602, doi:<a href="https://doi.org/10.1016/S0092-8674(03)00924-3">10.1016/S0092-8674(03)00924-3</a>.
  short: E. Benková, M. Michniewicz, M. Sauer, T. Teichmann, D. Seifertová, G. Jürgens,
    J. Friml, Cell 115 (2003) 591–602.
date_created: 2018-12-11T12:00:46Z
date_published: 2003-11-26T00:00:00Z
date_updated: 2026-05-22T08:47:43Z
day: '26'
doi: 10.1016/S0092-8674(03)00924-3
extern: '1'
external_id:
  pmid:
  - '14651850'
intvolume: '       115'
issue: '5'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1016/S0092-8674(03)00924-3
month: '11'
oa: 1
oa_version: Published Version
page: 591 - 602
pmid: 1
publication: Cell
publication_identifier:
  eissn:
  - 1097-4172
  issn:
  - 0092-8674
publication_status: published
publisher: Cell Press
publist_id: '3706'
quality_controlled: '1'
status: public
title: Local, efflux-dependent auxin gradients as a common module for plant organ
  formation
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 115
year: '2003'
...
---
OA_type: closed access
_id: '2992'
abstract:
- lang: eng
  text: Plants have many polarized cell types, but relatively little is known about
    the mechanisms that establish polarity. The orc mutant was identified originally
    by defects in root patterning, and positional cloning revealed that the affected
    gene encodes STEROL METHYLTRANSFERASE1, which is required for the appropriate
    synthesis and composition of major membrane sterols. smt1orc mutants displayed
    several conspicuous cell polarity defects. Columella root cap cells revealed perturbed
    polar positioning of different organelles, and in the smt1orc root epidermis,
    polar initiation of root hairs was more randomized. Polar auxin transport and
    expression of the auxin reporter DR5-β-glucuronidase were aberrant in smt1orc.
    Patterning defects in smt1orc resembled those observed in mutants of the PIN gene
    family of putative auxin efflux transporters. Consistently, the membrane localization
    of the PIN1 and PIN3 proteins was disturbed in smt1orc, whereas polar positioning
    of the influx carrier AUX1 appeared normal. Our results suggest that balanced
    sterol composition is a major requirement for cell polarity and auxin efflux in
    Arabidopsis.
article_processing_charge: No
article_type: original
author:
- first_name: Viola
  full_name: Willemsen, Viola
  last_name: Willemsen
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Markus
  full_name: Grebe, Markus
  last_name: Grebe
- first_name: Albert
  full_name: Van Den Toorn, Albert
  last_name: Van Den Toorn
- first_name: Klaus
  full_name: Palme, Klaus
  last_name: Palme
- first_name: Ben
  full_name: Scheres, Ben
  last_name: Scheres
citation:
  ama: Willemsen V, Friml J, Grebe M, Van Den Toorn A, Palme K, Scheres B. Cell polarity
    and PIN protein positioning in Arabidopsis require STEROL METHYLTRANSFERASE1 function.
    <i>Plant Cell</i>. 2003;15(3):612-625. doi:<a href="https://doi.org/10.1105/tpc.008433">10.1105/tpc.008433</a>
  apa: Willemsen, V., Friml, J., Grebe, M., Van Den Toorn, A., Palme, K., &#38; Scheres,
    B. (2003). Cell polarity and PIN protein positioning in Arabidopsis require STEROL
    METHYLTRANSFERASE1 function. <i>Plant Cell</i>. American Society of Plant Biologists.
    <a href="https://doi.org/10.1105/tpc.008433">https://doi.org/10.1105/tpc.008433</a>
  chicago: Willemsen, Viola, Jiří Friml, Markus Grebe, Albert Van Den Toorn, Klaus
    Palme, and Ben Scheres. “Cell Polarity and PIN Protein Positioning in Arabidopsis
    Require STEROL METHYLTRANSFERASE1 Function.” <i>Plant Cell</i>. American Society
    of Plant Biologists, 2003. <a href="https://doi.org/10.1105/tpc.008433">https://doi.org/10.1105/tpc.008433</a>.
  ieee: V. Willemsen, J. Friml, M. Grebe, A. Van Den Toorn, K. Palme, and B. Scheres,
    “Cell polarity and PIN protein positioning in Arabidopsis require STEROL METHYLTRANSFERASE1
    function,” <i>Plant Cell</i>, vol. 15, no. 3. American Society of Plant Biologists,
    pp. 612–625, 2003.
  ista: Willemsen V, Friml J, Grebe M, Van Den Toorn A, Palme K, Scheres B. 2003.
    Cell polarity and PIN protein positioning in Arabidopsis require STEROL METHYLTRANSFERASE1
    function. Plant Cell. 15(3), 612–625.
  mla: Willemsen, Viola, et al. “Cell Polarity and PIN Protein Positioning in Arabidopsis
    Require STEROL METHYLTRANSFERASE1 Function.” <i>Plant Cell</i>, vol. 15, no. 3,
    American Society of Plant Biologists, 2003, pp. 612–25, doi:<a href="https://doi.org/10.1105/tpc.008433">10.1105/tpc.008433</a>.
  short: V. Willemsen, J. Friml, M. Grebe, A. Van Den Toorn, K. Palme, B. Scheres,
    Plant Cell 15 (2003) 612–625.
date_created: 2018-12-11T12:00:44Z
date_published: 2003-03-01T00:00:00Z
date_updated: 2026-05-22T09:04:01Z
day: '01'
doi: 10.1105/tpc.008433
extern: '1'
external_id:
  pmid:
  - '12615936'
intvolume: '        15'
issue: '3'
language:
- iso: eng
month: '03'
oa_version: None
page: 612 - 625
pmid: 1
publication: Plant Cell
publication_identifier:
  eissn:
  - 1532-298X
  issn:
  - 1040-4651
publication_status: published
publisher: American Society of Plant Biologists
publist_id: '3710'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Cell polarity and PIN protein positioning in Arabidopsis require STEROL METHYLTRANSFERASE1
  function
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 15
year: '2003'
...
---
OA_type: closed access
_id: '2994'
abstract:
- lang: eng
  text: The regular arrangement of leaves around a plant's stem, called phyllotaxis,
    has for centuries attracted the attention of philosophers, mathematicians and
    natural scientists; however, to date, studies of phyllotaxis have been largely
    theoretical. Leaves and flowers are formed from the shoot apical meristem, triggered
    by the plant hormone auxin. Auxin is transported through plant tissues by specific
    cellular influx and efflux carrier proteins. Here we show that proteins involved
    in auxin transport regulate phyllotaxis. Our data indicate that auxin is transported
    upwards into the meristem through the epidermis and the outermost meristem cell
    layer. Existing leaf primordia act as sinks, redistributing auxin and creating
    its heterogeneous distribution in the meristem. Auxin accumulation occurs only
    at certain minimal distances from existing primordia, defining the position of
    future primordia. This model for phyllotaxis accounts for its reiterative nature,
    as well as its regularity and stability.
article_processing_charge: No
article_type: original
author:
- first_name: Didier
  full_name: Reinhardt, Didier
  last_name: Reinhardt
- first_name: Eva
  full_name: Pesce, Eva
  last_name: Pesce
- first_name: Pia
  full_name: Stieger, Pia
  last_name: Stieger
- first_name: Therese
  full_name: Mandel, Therese
  last_name: Mandel
- first_name: Kurt
  full_name: Baltensperger, Kurt
  last_name: Baltensperger
- first_name: Malcolm
  full_name: Bennett, Malcolm
  last_name: Bennett
- first_name: Jan
  full_name: Traas, Jan
  last_name: Traas
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Cris
  full_name: Kuhlemeier, Cris
  last_name: Kuhlemeier
citation:
  ama: Reinhardt D, Pesce E, Stieger P, et al. Regulation of phyllotaxis by polar
    auxin transport. <i>Nature</i>. 2003;426:255-260. doi:<a href="https://doi.org/10.1038/nature02081">10.1038/nature02081</a>
  apa: Reinhardt, D., Pesce, E., Stieger, P., Mandel, T., Baltensperger, K., Bennett,
    M., … Kuhlemeier, C. (2003). Regulation of phyllotaxis by polar auxin transport.
    <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/nature02081">https://doi.org/10.1038/nature02081</a>
  chicago: Reinhardt, Didier, Eva Pesce, Pia Stieger, Therese Mandel, Kurt Baltensperger,
    Malcolm Bennett, Jan Traas, Jiří Friml, and Cris Kuhlemeier. “Regulation of Phyllotaxis
    by Polar Auxin Transport.” <i>Nature</i>. Springer Nature, 2003. <a href="https://doi.org/10.1038/nature02081">https://doi.org/10.1038/nature02081</a>.
  ieee: D. Reinhardt <i>et al.</i>, “Regulation of phyllotaxis by polar auxin transport,”
    <i>Nature</i>, vol. 426. Springer Nature, pp. 255–260, 2003.
  ista: Reinhardt D, Pesce E, Stieger P, Mandel T, Baltensperger K, Bennett M, Traas
    J, Friml J, Kuhlemeier C. 2003. Regulation of phyllotaxis by polar auxin transport.
    Nature. 426, 255–260.
  mla: Reinhardt, Didier, et al. “Regulation of Phyllotaxis by Polar Auxin Transport.”
    <i>Nature</i>, vol. 426, Springer Nature, 2003, pp. 255–60, doi:<a href="https://doi.org/10.1038/nature02081">10.1038/nature02081</a>.
  short: D. Reinhardt, E. Pesce, P. Stieger, T. Mandel, K. Baltensperger, M. Bennett,
    J. Traas, J. Friml, C. Kuhlemeier, Nature 426 (2003) 255–260.
date_created: 2018-12-11T12:00:45Z
date_published: 2003-11-20T00:00:00Z
date_updated: 2026-05-22T08:55:25Z
day: '20'
doi: 10.1038/nature02081
extern: '1'
external_id:
  pmid:
  - '14628043'
intvolume: '       426'
language:
- iso: eng
month: '11'
oa_version: None
page: 255 - 260
pmid: 1
publication: Nature
publication_identifier:
  eissn:
  - 1476-4687
  issn:
  - 0028-0836
publication_status: published
publisher: Springer Nature
publist_id: '3707'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Regulation of phyllotaxis by polar auxin transport
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 426
year: '2003'
...
---
OA_type: closed access
_id: '2993'
abstract:
- lang: eng
  text: Plant biology is currently experiencing a growing demand for easy and reliable
    mRNA and protein localisation techniques. Here, we present novel whole mount in
    situ hybridisation and immunolocalisation protocols, suitable to localise mRNAs
    and proteins in Arabidopsis seedlings. We demonstrate that these methods can be
    used in different organs of Arabidopsis seedlings as well as in other plant species.
    In order to achieve better reproducibility and higher throughput, we modified
    these protocols for automation to be performed by a liquid handling robot. In
    addition, we show that other procedures such as reporter enzyme assays and tissue
    clearing can be similarly automated. We present examples of application of our
    protocols including mRNA localisation and proteins and epitope tag (co)localisations
    which demonstrate that these methods provide reliable and versatile tools for
    expression, localisation and anatomical studies in plants.
article_processing_charge: No
article_type: original
author:
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Eva
  full_name: Benková, Eva
  id: 38F4F166-F248-11E8-B48F-1D18A9856A87
  last_name: Benková
  orcid: 0000-0002-8510-9739
- first_name: Ulrike
  full_name: Mayer, Ulrike
  last_name: Mayer
- first_name: Klaus
  full_name: Palme, Klaus
  last_name: Palme
- first_name: Gerhard
  full_name: Muster, Gerhard
  last_name: Muster
citation:
  ama: Friml J, Benková E, Mayer U, Palme K, Muster G. Automated whole mount localisation
    techniques for plant seedlings. <i>Plant Journal</i>. 2003;34(1):115-124. doi:<a
    href="https://doi.org/10.1046/j.1365-313X.2003.01705.x">10.1046/j.1365-313X.2003.01705.x</a>
  apa: Friml, J., Benková, E., Mayer, U., Palme, K., &#38; Muster, G. (2003). Automated
    whole mount localisation techniques for plant seedlings. <i>Plant Journal</i>.
    Wiley. <a href="https://doi.org/10.1046/j.1365-313X.2003.01705.x">https://doi.org/10.1046/j.1365-313X.2003.01705.x</a>
  chicago: Friml, Jiří, Eva Benková, Ulrike Mayer, Klaus Palme, and Gerhard Muster.
    “Automated Whole Mount Localisation Techniques for Plant Seedlings.” <i>Plant
    Journal</i>. Wiley, 2003. <a href="https://doi.org/10.1046/j.1365-313X.2003.01705.x">https://doi.org/10.1046/j.1365-313X.2003.01705.x</a>.
  ieee: J. Friml, E. Benková, U. Mayer, K. Palme, and G. Muster, “Automated whole
    mount localisation techniques for plant seedlings,” <i>Plant Journal</i>, vol.
    34, no. 1. Wiley, pp. 115–124, 2003.
  ista: Friml J, Benková E, Mayer U, Palme K, Muster G. 2003. Automated whole mount
    localisation techniques for plant seedlings. Plant Journal. 34(1), 115–124.
  mla: Friml, Jiří, et al. “Automated Whole Mount Localisation Techniques for Plant
    Seedlings.” <i>Plant Journal</i>, vol. 34, no. 1, Wiley, 2003, pp. 115–24, doi:<a
    href="https://doi.org/10.1046/j.1365-313X.2003.01705.x">10.1046/j.1365-313X.2003.01705.x</a>.
  short: J. Friml, E. Benková, U. Mayer, K. Palme, G. Muster, Plant Journal 34 (2003)
    115–124.
date_created: 2018-12-11T12:00:44Z
date_published: 2003-04-01T00:00:00Z
date_updated: 2026-05-22T09:01:28Z
day: '01'
doi: 10.1046/j.1365-313X.2003.01705.x
extern: '1'
external_id:
  pmid:
  - '12662314'
intvolume: '        34'
issue: '1'
language:
- iso: eng
month: '04'
oa_version: None
page: 115 - 124
pmid: 1
publication: Plant Journal
publication_identifier:
  eissn:
  - 1365-313X
  issn:
  - 0960-7412
publication_status: published
publisher: Wiley
publist_id: '3709'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Automated whole mount localisation techniques for plant seedlings
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 34
year: '2003'
...
---
_id: '2995'
abstract:
- lang: eng
  text: "Axis formation occurs in plants, as in animals, during early embryogenesis.
    However, the underlying mechanism is not known. Here we show that the first manifestation
    of the apical-basal axis in plants, the asymmetric division of the zygote, produces
    a basal cell that transports and an apical cell that responds to the signalling
    molecule auxin. This apical-basal auxin activity gradient triggers the specification
    of apical embryo structures and is actively maintained by a novel component of
    auxin efflux, PIN7, which is located apically in the basal cell. Later, the developmentally
    regulated reversal of PIN7 and onset of PIN1 polar localization reorganize the
    auxin gradient for specification of the basal root pole. An analysis of pin quadruple
    mutants identifies PIN-dependent transport as an essential part of the mechanism
    for embryo axis formation. Our results indicate how the establishment of cell
    polarity, polar auxin efflux and local auxin response result in apical-basal axis
    formation of the embryo, and thus determine the axiality of the adult plant.\r\n"
article_processing_charge: No
author:
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Anne
  full_name: Vieten, Anne
  last_name: Vieten
- first_name: Michael
  full_name: Sauer, Michael
  last_name: Sauer
- first_name: Dolf
  full_name: Weijers, Dolf
  last_name: Weijers
- first_name: Heinz
  full_name: Schwarz, Heinz
  last_name: Schwarz
- first_name: Thorsten
  full_name: Hamann, Thorsten
  last_name: Hamann
- first_name: Remko
  full_name: Offringa, Remko
  last_name: Offringa
- first_name: Gerd
  full_name: Jürgens, Gerd
  last_name: Jürgens
citation:
  ama: Friml J, Vieten A, Sauer M, et al. Efflux dependent auxin gradients establish
    the apical basal axis of Arabidopsis. <i>Nature</i>. 2003;426:147-153. doi:<a
    href="https://doi.org/10.1038/nature02085">10.1038/nature02085</a>
  apa: Friml, J., Vieten, A., Sauer, M., Weijers, D., Schwarz, H., Hamann, T., … Jürgens,
    G. (2003). Efflux dependent auxin gradients establish the apical basal axis of
    Arabidopsis. <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/nature02085">https://doi.org/10.1038/nature02085</a>
  chicago: Friml, Jiří, Anne Vieten, Michael Sauer, Dolf Weijers, Heinz Schwarz, Thorsten
    Hamann, Remko Offringa, and Gerd Jürgens. “Efflux Dependent Auxin Gradients Establish
    the Apical Basal Axis of Arabidopsis.” <i>Nature</i>. Springer Nature, 2003. <a
    href="https://doi.org/10.1038/nature02085">https://doi.org/10.1038/nature02085</a>.
  ieee: J. Friml <i>et al.</i>, “Efflux dependent auxin gradients establish the apical
    basal axis of Arabidopsis,” <i>Nature</i>, vol. 426. Springer Nature, pp. 147–153,
    2003.
  ista: Friml J, Vieten A, Sauer M, Weijers D, Schwarz H, Hamann T, Offringa R, Jürgens
    G. 2003. Efflux dependent auxin gradients establish the apical basal axis of Arabidopsis.
    Nature. 426, 147–153.
  mla: Friml, Jiří, et al. “Efflux Dependent Auxin Gradients Establish the Apical
    Basal Axis of Arabidopsis.” <i>Nature</i>, vol. 426, Springer Nature, 2003, pp.
    147–53, doi:<a href="https://doi.org/10.1038/nature02085">10.1038/nature02085</a>.
  short: J. Friml, A. Vieten, M. Sauer, D. Weijers, H. Schwarz, T. Hamann, R. Offringa,
    G. Jürgens, Nature 426 (2003) 147–153.
date_created: 2018-12-11T12:00:45Z
date_published: 2003-11-13T00:00:00Z
date_updated: 2026-05-22T08:58:10Z
day: '13'
doi: 10.1038/nature02085
extern: '1'
external_id:
  pmid:
  - '14614497 '
intvolume: '       426'
language:
- iso: eng
month: '11'
oa_version: None
page: 147 - 153
pmid: 1
publication: Nature
publication_identifier:
  eissn:
  - 1476-4687
  issn:
  - 0028-0836
publication_status: published
publisher: Springer Nature
publist_id: '3708'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Efflux dependent auxin gradients establish the apical basal axis of Arabidopsis
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 426
year: '2003'
...
---
OA_type: closed access
_id: '3139'
article_processing_charge: No
author:
- first_name: Hsiao
  full_name: Chen, Hsiao
  last_name: Chen
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Silvia
  full_name: Arber, Silvia
  last_name: Arber
- first_name: Eric
  full_name: Frank, Eric
  last_name: Frank
citation:
  ama: Chen H, Hippenmeyer S, Arber S, Frank E. Development of the monosynaptic stretch
    reflex circuit. <i>Current Opinion in Neurobiology</i>. 2003;13(1):96-102. doi:<a
    href="https://doi.org/10.1016/S0959-4388(03)00006-0">10.1016/S0959-4388(03)00006-0</a>
  apa: Chen, H., Hippenmeyer, S., Arber, S., &#38; Frank, E. (2003). Development of
    the monosynaptic stretch reflex circuit. <i>Current Opinion in Neurobiology</i>.
    Elsevier. <a href="https://doi.org/10.1016/S0959-4388(03)00006-0">https://doi.org/10.1016/S0959-4388(03)00006-0</a>
  chicago: Chen, Hsiao, Simon Hippenmeyer, Silvia Arber, and Eric Frank. “Development
    of the Monosynaptic Stretch Reflex Circuit.” <i>Current Opinion in Neurobiology</i>.
    Elsevier, 2003. <a href="https://doi.org/10.1016/S0959-4388(03)00006-0">https://doi.org/10.1016/S0959-4388(03)00006-0</a>.
  ieee: H. Chen, S. Hippenmeyer, S. Arber, and E. Frank, “Development of the monosynaptic
    stretch reflex circuit,” <i>Current Opinion in Neurobiology</i>, vol. 13, no.
    1. Elsevier, pp. 96–102, 2003.
  ista: Chen H, Hippenmeyer S, Arber S, Frank E. 2003. Development of the monosynaptic
    stretch reflex circuit. Current Opinion in Neurobiology. 13(1), 96–102.
  mla: Chen, Hsiao, et al. “Development of the Monosynaptic Stretch Reflex Circuit.”
    <i>Current Opinion in Neurobiology</i>, vol. 13, no. 1, Elsevier, 2003, pp. 96–102,
    doi:<a href="https://doi.org/10.1016/S0959-4388(03)00006-0">10.1016/S0959-4388(03)00006-0</a>.
  short: H. Chen, S. Hippenmeyer, S. Arber, E. Frank, Current Opinion in Neurobiology
    13 (2003) 96–102.
date_created: 2018-12-11T12:01:37Z
date_published: 2003-02-01T00:00:00Z
date_updated: 2026-05-22T08:40:52Z
day: '01'
doi: 10.1016/S0959-4388(03)00006-0
extern: '1'
external_id:
  pmid:
  - '12593987'
intvolume: '        13'
issue: '1'
language:
- iso: eng
month: '02'
oa_version: None
page: 96 - 102
pmid: 1
publication: Current Opinion in Neurobiology
publication_identifier:
  eissn:
  - 1873-6882
  issn:
  - 0959-4388
publication_status: published
publisher: Elsevier
publist_id: '3557'
status: public
title: Development of the monosynaptic stretch reflex circuit
type: review
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 13
year: '2003'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '2633'
abstract:
- lang: eng
  text: The modulation of calcium channels by metabotropic glutamate receptors (mGluRs)
    is a key event in the fine-tuning of neurotransmitter release. Here we report
    that, in cerebrocortical nerve terminals of adult rats, the inhibition of glutamate
    release is mediated by mGluR7. In this preparation, the major component of glutamate
    release is supported by P/Q-type Ca2+ channels (72.7%). However, mGluR7 selectively
    reduced the release component that is associated with N-type Ca2+ channels (29.9%).
    Inhibition of P/Q channels by mGluR7 is not masked by the higher efficiency of
    these channels in driving glutamate release when compared with N-type channels.
    Thus, activation of mGluR7 failed to reduce the release associated with P/Q channels
    when the extracellular calcium concentration, ([Ca2+]o), was reduced from 1.3
    to 0.5 mM. Through Ca2+ imaging, we show that Ca2+ channels are distributed in
    a heterogeneous manner in individual nerve terminals. Indeed, in this preparation,
    nerve terminals were observed that contain N-type (31.1%; conotoxin GVIA-sensitive)
    or P/Q-type (64.3%; agatoxin IVA-sensitive) channels or that were insensitive
    to these two toxins (4.6%). Interestingly, the great majority of the responses
    to L-AP4 (95.4%) were observed in nerve terminals containing N-type channels.
    This specific co-localization of mGluR7 and N-type Ca2+-channels could explain
    the failure of the receptor to inhibit the P/Q channel-associated release component
    and also reveal the existence of specific targeting mechanisms to localize the
    two proteins in the same nerve terminal subset.
article_processing_charge: No
article_type: original
author:
- first_name: Carmelo
  full_name: Millán, Carmelo
  last_name: Millán
- first_name: Enrique
  full_name: Castro, Enrique
  last_name: Castro
- first_name: Magdalena
  full_name: Torres, Magdalena
  last_name: Torres
- first_name: Ryuichi
  full_name: Shigemoto, Ryuichi
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: José
  full_name: Sánchez Prieto, José
  last_name: Sánchez Prieto
citation:
  ama: Millán C, Castro E, Torres M, Shigemoto R, Sánchez Prieto J. Co-expression
    of metabotropic glutamate receptor 7 and N-type Ca2+ channels in single cerebrocortical
    nerve terminals of adult rats. <i>Journal of Biological Chemistry</i>. 2003;278(26):23955-23962.
    doi:<a href="https://doi.org/10.1074/jbc.M211471200">10.1074/jbc.M211471200</a>
  apa: Millán, C., Castro, E., Torres, M., Shigemoto, R., &#38; Sánchez Prieto, J.
    (2003). Co-expression of metabotropic glutamate receptor 7 and N-type Ca2+ channels
    in single cerebrocortical nerve terminals of adult rats. <i>Journal of Biological
    Chemistry</i>. Elsevier. <a href="https://doi.org/10.1074/jbc.M211471200">https://doi.org/10.1074/jbc.M211471200</a>
  chicago: Millán, Carmelo, Enrique Castro, Magdalena Torres, Ryuichi Shigemoto, and
    José Sánchez Prieto. “Co-Expression of Metabotropic Glutamate Receptor 7 and N-Type
    Ca2+ Channels in Single Cerebrocortical Nerve Terminals of Adult Rats.” <i>Journal
    of Biological Chemistry</i>. Elsevier, 2003. <a href="https://doi.org/10.1074/jbc.M211471200">https://doi.org/10.1074/jbc.M211471200</a>.
  ieee: C. Millán, E. Castro, M. Torres, R. Shigemoto, and J. Sánchez Prieto, “Co-expression
    of metabotropic glutamate receptor 7 and N-type Ca2+ channels in single cerebrocortical
    nerve terminals of adult rats,” <i>Journal of Biological Chemistry</i>, vol. 278,
    no. 26. Elsevier, pp. 23955–23962, 2003.
  ista: Millán C, Castro E, Torres M, Shigemoto R, Sánchez Prieto J. 2003. Co-expression
    of metabotropic glutamate receptor 7 and N-type Ca2+ channels in single cerebrocortical
    nerve terminals of adult rats. Journal of Biological Chemistry. 278(26), 23955–23962.
  mla: Millán, Carmelo, et al. “Co-Expression of Metabotropic Glutamate Receptor 7
    and N-Type Ca2+ Channels in Single Cerebrocortical Nerve Terminals of Adult Rats.”
    <i>Journal of Biological Chemistry</i>, vol. 278, no. 26, Elsevier, 2003, pp.
    23955–62, doi:<a href="https://doi.org/10.1074/jbc.M211471200">10.1074/jbc.M211471200</a>.
  short: C. Millán, E. Castro, M. Torres, R. Shigemoto, J. Sánchez Prieto, Journal
    of Biological Chemistry 278 (2003) 23955–23962.
date_created: 2018-12-11T11:58:47Z
date_published: 2003-07-27T00:00:00Z
date_updated: 2026-05-22T10:29:51Z
day: '27'
doi: 10.1074/jbc.M211471200
extern: '1'
external_id:
  pmid:
  - '12692128 '
intvolume: '       278'
issue: '26'
language:
- iso: eng
license: https://creativecommons.org/licenses/by/4.0/
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1074/jbc.M211471200
month: '07'
oa: 1
oa_version: Published Version
page: 23955 - 23962
pmid: 1
publication: Journal of Biological Chemistry
publication_identifier:
  eissn:
  - 1083-351X
  issn:
  - 0021-9258
publication_status: published
publisher: Elsevier
publist_id: '4265'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Co-expression of metabotropic glutamate receptor 7 and N-type Ca2+ channels
  in single cerebrocortical nerve terminals of adult rats
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 278
year: '2003'
...
---
OA_type: closed access
_id: '2635'
abstract:
- lang: eng
  text: Metabotropic GABAB receptors mediate slow inhibitory effects presynaptically
    and postsynaptically. Using preembedding immunohistochemical methods combined
    with quantitative analysis of GABAB receptor subunit immunoreactivity, this study
    provides a detailed description of the cellular and subcellular localization of
    GABAB1a/b and GABA B2 in the rat hippocampus. At the light microscopic level,
    an overlapping distribution of GABAB1a/b and GABAB2 was revealed in the dendritic
    layers of the hippocampus. In addition, expression of the GABAB1a/b subunit was
    found in somata of CA1 pyramidal cells and of a subset of GABAergic interneurons.
    At the electron microscopic level, immunoreactivity for both subunits was observed
    on presynaptic and, more abundantly, on postsynaptic elements. Presynaptically,
    subunits were mainly detected in the extrasynaptic membrane and occasionally over
    the presynaptic membrane specialization of putative glutamatergic and, to a lesser
    extent, GABAergic axon terminals. Postsynaptically, the majority of GABAB receptor
    subunits were localized to the extrasynaptic plasma membrane of spines and dendritic
    shafts of principal cells and shafts of interneuron dendrites. Quantitative analysis
    revealed enrichment of GABAB1a/b around putative glutamatergic synapses on spines
    and an even distribution on dendritic shafts of pyramidal cells contacted by GABAergic
    boutons. The association of GABAB receptors with glutamatergic synapses at both
    presynaptic and postsynaptic sides indicates their intimate involvement in the
    modulation of glutamatergic neurotransmission. The dominant extrasynaptic localization
    of GABAB receptor subunits suggests that their activation is dependent on spillover
    of GABA requiring simultaneous activity of populations of GABAergic cells as it
    occurs during population oscillations or epileptic seizures.
article_processing_charge: No
article_type: original
author:
- first_name: Ákos
  full_name: Kulik, Ákos
  last_name: Kulik
- first_name: Imre
  full_name: Vida, Imre
  last_name: Vida
- first_name: Rafael
  full_name: Luján, Rafael
  last_name: Luján
- first_name: Carola
  full_name: Haas, Carola
  last_name: Haas
- first_name: Guillermina
  full_name: López Bendito, Guillermina
  last_name: López Bendito
- first_name: Ryuichi
  full_name: Shigemoto, Ryuichi
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Michael
  full_name: Frotscher, Michael
  last_name: Frotscher
citation:
  ama: Kulik Á, Vida I, Luján R, et al. Subcellular Localization of Metabotropic GABAB
    Receptor Subunits GABAB1a/b and GABAB2 in the Rat Hippocampus. <i>Journal of Neuroscience</i>.
    2003;23(35):11026-11035. doi:<a href="https://doi.org/10.1523/JNEUROSCI.23-35-11026.2003">10.1523/JNEUROSCI.23-35-11026.2003</a>
  apa: Kulik, Á., Vida, I., Luján, R., Haas, C., López Bendito, G., Shigemoto, R.,
    &#38; Frotscher, M. (2003). Subcellular Localization of Metabotropic GABAB Receptor
    Subunits GABAB1a/b and GABAB2 in the Rat Hippocampus. <i>Journal of Neuroscience</i>.
    Society for Neuroscience. <a href="https://doi.org/10.1523/JNEUROSCI.23-35-11026.2003">https://doi.org/10.1523/JNEUROSCI.23-35-11026.2003</a>
  chicago: Kulik, Ákos, Imre Vida, Rafael Luján, Carola Haas, Guillermina López Bendito,
    Ryuichi Shigemoto, and Michael Frotscher. “Subcellular Localization of Metabotropic
    GABAB Receptor Subunits GABAB1a/b and GABAB2 in the Rat Hippocampus.” <i>Journal
    of Neuroscience</i>. Society for Neuroscience, 2003. <a href="https://doi.org/10.1523/JNEUROSCI.23-35-11026.2003">https://doi.org/10.1523/JNEUROSCI.23-35-11026.2003</a>.
  ieee: Á. Kulik <i>et al.</i>, “Subcellular Localization of Metabotropic GABAB Receptor
    Subunits GABAB1a/b and GABAB2 in the Rat Hippocampus,” <i>Journal of Neuroscience</i>,
    vol. 23, no. 35. Society for Neuroscience, pp. 11026–11035, 2003.
  ista: Kulik Á, Vida I, Luján R, Haas C, López Bendito G, Shigemoto R, Frotscher
    M. 2003. Subcellular Localization of Metabotropic GABAB Receptor Subunits GABAB1a/b
    and GABAB2 in the Rat Hippocampus. Journal of Neuroscience. 23(35), 11026–11035.
  mla: Kulik, Ákos, et al. “Subcellular Localization of Metabotropic GABAB Receptor
    Subunits GABAB1a/b and GABAB2 in the Rat Hippocampus.” <i>Journal of Neuroscience</i>,
    vol. 23, no. 35, Society for Neuroscience, 2003, pp. 11026–35, doi:<a href="https://doi.org/10.1523/JNEUROSCI.23-35-11026.2003">10.1523/JNEUROSCI.23-35-11026.2003</a>.
  short: Á. Kulik, I. Vida, R. Luján, C. Haas, G. López Bendito, R. Shigemoto, M.
    Frotscher, Journal of Neuroscience 23 (2003) 11026–11035.
date_created: 2018-12-11T11:58:47Z
date_published: 2003-12-03T00:00:00Z
date_updated: 2026-05-22T09:50:16Z
day: '03'
doi: 10.1523/JNEUROSCI.23-35-11026.2003
extern: '1'
external_id:
  pmid:
  - '14657159'
intvolume: '        23'
issue: '35'
language:
- iso: eng
month: '12'
oa_version: None
page: 11026 - 11035
pmid: 1
publication: Journal of Neuroscience
publication_identifier:
  eissn:
  - 1529-2401
  issn:
  - 0270-6474
publication_status: published
publisher: Society for Neuroscience
publist_id: '4263'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Subcellular Localization of Metabotropic GABAB Receptor Subunits GABAB1a/b
  and GABAB2 in the Rat Hippocampus
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 23
year: '2003'
...
---
OA_type: closed access
_id: '2632'
abstract:
- lang: eng
  text: In many brain regions, hyperpolarization-activated cationic currents (Ih)
    are involved in the generation of rhythmic activities, but the role of Ih in olfactory
    oscillations remains unclear. Knowledge of the cellular and subcellular distributions
    of hyperpolarization-activated and cyclic nucleotide-gated channel (HCN) subunits
    is necessary for understanding the role of Ih in olfactory network activities.
    Using light microscopic immunocytochemistry, we demonstrate strong HCN1 labelling
    of the glomerular layer and moderate staining of granule cell, internal and external
    plexiform layers of the rat main olfactory bulb. In the glomerular layer, among
    many unlabelled neurons, two distinct subpopulations of juxtaglomerular cells
    are labelled. Approximately 10% of the juxtaglomerular cells strongly express
    HCN1. These small diameter cells are immunoreactive for GABA and comprise a subpopulation
    of periglomerular cells. An additional subset of juxtaglomerular cells (≈ 1%)
    expresses low levels of HCN1. They are large in diameter, GABA immunonegative
    but immunopositive for vesicular glutamate transporter 2, characterizing them
    as external tufted cells. Quantitative immunogold localization revealed that the
    somatic plasma membranes of periglomerular cells contain approximately four times
    more HCN1 labelling than those of external tufted cells. Unlike in cortical pyramidal
    cells, immunogold density for HCN1 does not significantly differ in somatic and
    dendritic plasma membranes of external tufted cells, indicating that post-synaptic
    potentials arriving at proximal and distal dendrites are modulated by the same
    density of I h. Our results demonstrate a cell type-dependent expression of HCN1
    in the olfactory bulb and predict a differential contribution of distinct juxtaglomerular
    cell types to network oscillations.
article_processing_charge: No
article_type: original
author:
- first_name: Noémi
  full_name: Holderith, Noémi
  last_name: Holderith
- first_name: Ryuichi
  full_name: Shigemoto, Ryuichi
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Zoltán
  full_name: Nusser, Zoltán
  last_name: Nusser
citation:
  ama: Holderith N, Shigemoto R, Nusser Z. Cell type-dependent expression of HCN1
    in the main olfactory bulb. <i>European Journal of Neuroscience</i>. 2003;18(2):344-354.
    doi:<a href="https://doi.org/10.1046/j.1460-9568.2003.02756.x">10.1046/j.1460-9568.2003.02756.x</a>
  apa: Holderith, N., Shigemoto, R., &#38; Nusser, Z. (2003). Cell type-dependent
    expression of HCN1 in the main olfactory bulb. <i>European Journal of Neuroscience</i>.
    Wiley-Blackwell. <a href="https://doi.org/10.1046/j.1460-9568.2003.02756.x">https://doi.org/10.1046/j.1460-9568.2003.02756.x</a>
  chicago: Holderith, Noémi, Ryuichi Shigemoto, and Zoltán Nusser. “Cell Type-Dependent
    Expression of HCN1 in the Main Olfactory Bulb.” <i>European Journal of Neuroscience</i>.
    Wiley-Blackwell, 2003. <a href="https://doi.org/10.1046/j.1460-9568.2003.02756.x">https://doi.org/10.1046/j.1460-9568.2003.02756.x</a>.
  ieee: N. Holderith, R. Shigemoto, and Z. Nusser, “Cell type-dependent expression
    of HCN1 in the main olfactory bulb,” <i>European Journal of Neuroscience</i>,
    vol. 18, no. 2. Wiley-Blackwell, pp. 344–354, 2003.
  ista: Holderith N, Shigemoto R, Nusser Z. 2003. Cell type-dependent expression of
    HCN1 in the main olfactory bulb. European Journal of Neuroscience. 18(2), 344–354.
  mla: Holderith, Noémi, et al. “Cell Type-Dependent Expression of HCN1 in the Main
    Olfactory Bulb.” <i>European Journal of Neuroscience</i>, vol. 18, no. 2, Wiley-Blackwell,
    2003, pp. 344–54, doi:<a href="https://doi.org/10.1046/j.1460-9568.2003.02756.x">10.1046/j.1460-9568.2003.02756.x</a>.
  short: N. Holderith, R. Shigemoto, Z. Nusser, European Journal of Neuroscience 18
    (2003) 344–354.
date_created: 2018-12-11T11:58:47Z
date_published: 2003-07-01T00:00:00Z
date_updated: 2026-05-22T10:45:14Z
day: '01'
doi: 10.1046/j.1460-9568.2003.02756.x
extern: '1'
external_id:
  pmid:
  - '12887416'
intvolume: '        18'
issue: '2'
language:
- iso: eng
month: '07'
oa_version: None
page: 344 - 354
pmid: 1
publication: European Journal of Neuroscience
publication_identifier:
  eissn:
  - 1460-9568
  issn:
  - 0953-816X
publication_status: published
publisher: Wiley-Blackwell
publist_id: '4266'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Cell type-dependent expression of HCN1 in the main olfactory bulb
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 18
year: '2003'
...
