---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '17240'
abstract:
- lang: eng
  text: We prove an upper bound on the energy density of the dilute spin-\(\frac {1}{2}\)
    Fermi gas capturing the leading correction to the kinetic energy\(8\pi a\rho _\uparrow\rho
    _\downarrow\) with an error of size smaller than\(a\rho^{2}(a^ 3\rho)^{1/3-\varepsilon}\)
    for any\(\varepsilon> 0\), where a denotes the scattering length of the interaction.
    The result is valid for a large class of interactions including interactions with
    a hard core. A central ingredient in the proof is a rigorous version of a fermionic
    cluster expansion adapted from the formal expansion of Gaudin et al. (Nucl Phys
    A 176(2):237–260, 1971. https://doi.org/10.1016/0375-9474(71)90267-3).
acknowledgement: "Open access funding provided by Institute of Science and Technology
  (IST Austria).\r\nWe thank Alessandro Giuliani and Robert Seiringer for helpful
  discussions and Robert Seiringer for his comments on the manuscript. Financial support
  by the Austrian Science Fund (FWF) through Grant https://doi.org/10.55776/I6427
  (as part of the SFB/TRR 352) is gratefully acknowledged."
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Asbjørn Bækgaard
  full_name: Lauritsen, Asbjørn Bækgaard
  id: e1a2682f-dc8d-11ea-abe3-81da9ac728f1
  last_name: Lauritsen
  orcid: 0000-0003-4476-2288
citation:
  ama: Lauritsen AB. Almost optimal upper bound for the ground state energy of a dilute
    Fermi gas via cluster expansion. <i>Annales Henri Poincare</i>. 2025;26:203-243.
    doi:<a href="https://doi.org/10.1007/s00023-024-01450-1">10.1007/s00023-024-01450-1</a>
  apa: Lauritsen, A. B. (2025). Almost optimal upper bound for the ground state energy
    of a dilute Fermi gas via cluster expansion. <i>Annales Henri Poincare</i>. Springer
    Nature. <a href="https://doi.org/10.1007/s00023-024-01450-1">https://doi.org/10.1007/s00023-024-01450-1</a>
  chicago: Lauritsen, Asbjørn Bækgaard. “Almost Optimal Upper Bound for the Ground
    State Energy of a Dilute Fermi Gas via Cluster Expansion.” <i>Annales Henri Poincare</i>.
    Springer Nature, 2025. <a href="https://doi.org/10.1007/s00023-024-01450-1">https://doi.org/10.1007/s00023-024-01450-1</a>.
  ieee: A. B. Lauritsen, “Almost optimal upper bound for the ground state energy of
    a dilute Fermi gas via cluster expansion,” <i>Annales Henri Poincare</i>, vol.
    26. Springer Nature, pp. 203–243, 2025.
  ista: Lauritsen AB. 2025. Almost optimal upper bound for the ground state energy
    of a dilute Fermi gas via cluster expansion. Annales Henri Poincare. 26, 203–243.
  mla: Lauritsen, Asbjørn Bækgaard. “Almost Optimal Upper Bound for the Ground State
    Energy of a Dilute Fermi Gas via Cluster Expansion.” <i>Annales Henri Poincare</i>,
    vol. 26, Springer Nature, 2025, pp. 203–43, doi:<a href="https://doi.org/10.1007/s00023-024-01450-1">10.1007/s00023-024-01450-1</a>.
  short: A.B. Lauritsen, Annales Henri Poincare 26 (2025) 203–243.
corr_author: '1'
date_created: 2024-07-14T22:01:12Z
date_published: 2025-01-01T00:00:00Z
date_updated: 2026-04-07T13:01:40Z
day: '01'
ddc:
- '510'
department:
- _id: RoSe
doi: 10.1007/s00023-024-01450-1
external_id:
  isi:
  - '001261197700002'
  pmid:
  - '39926012'
file:
- access_level: open_access
  checksum: 01b6572f55f721e97498522c85072ed2
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  creator: dernst
  date_created: 2025-08-05T11:42:27Z
  date_updated: 2025-08-05T11:42:27Z
  file_id: '20125'
  file_name: 2025_AnnalesHenriPoincare_Lauritsen.pdf
  file_size: 797241
  relation: main_file
  success: 1
file_date_updated: 2025-08-05T11:42:27Z
has_accepted_license: '1'
intvolume: '        26'
isi: 1
language:
- iso: eng
license: https://creativecommons.org/licenses/by/4.0/
month: '01'
oa: 1
oa_version: Published Version
page: 203-243
pmid: 1
project:
- _id: bda63fe5-d553-11ed-ba76-a16e3d2f256b
  grant_number: I06427
  name: Mathematical Challenges in BCS Theory of Superconductivity
publication: Annales Henri Poincare
publication_identifier:
  issn:
  - 1424-0637
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  record:
  - id: '18135'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Almost optimal upper bound for the ground state energy of a dilute Fermi gas
  via cluster expansion
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 26
year: '2025'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '17293'
abstract:
- lang: eng
  text: Voltage-gated CaV2.1 (P/Q-type) Ca2+ channels play a crucial role in regulating
    neurotransmitter release, thus contributing to synaptic plasticity and to processes
    such as learning and memory. Despite their recognized importance in neural function,
    there is limited information on their potential involvement in neurodegenerative
    conditions such as Alzheimer's disease (AD). Here, we aimed to explore the impact
    of AD pathology on the density and nanoscale compartmentalization of CaV2.1 channels
    in the hippocampus in association with GABAB receptors. Histoblotting experiments
    showed that the density of CaV2.1 channel was significantly reduced in the hippocampus
    of APP/PS1 mice in a laminar-dependent manner. CaV2.1 channel was enriched in
    the active zone of the axon terminals and was present at a very low density over
    the surface of dendritic tree of the CA1 pyramidal cells, as shown by quantitative
    SDS-digested freeze-fracture replica labelling (SDS-FRL). In APP/PS1 mice, the
    density of CaV2.1 channel in the active zone was significantly reduced in the
    strata radiatum and lacunosum-moleculare, while it remained unaltered in the stratum
    oriens. The decline in Cav2.1 channel density was found to be associated with
    a corresponding impairment in the GABAergic synaptic function, as evidenced by
    electrophysiological experiments carried out in the hippocampus of APP/PS1 mice.
    Remarkably, double SDS-FRL showed a co-clustering of CaV2.1 channel and GABAB1
    receptor in nanodomains (~40–50 nm) in wild type mice, while in APP/PS1 mice this
    nanoarchitecture was absent. Together, these findings suggest that the AD pathology-induced
    reduction in CaV2.1 channel density and CaV2.1-GABAB1 de-clustering may play a
    role in the synaptic transmission alterations shown in the AD hippocampus. Therefore,
    uncovering these layer-dependent changes in P/Q calcium currents associated with
    AD pathology can benefit the development of future strategies for AD management.
acknowledgement: "Funding sources were Spanish Ministerio de Economía y Competitividad,
  Junta de Comunidades de Castilla-La Mancha (Spain), Life Science Innovation Center
  at University of Fukui and German Research Foundation.\r\nGrants RTI2018-095812-B-I00
  and PID2021-125875OB-I00 funded by MCIN/AEI/10.13039/501100011033 and by “ERDF A
  way of making Europe” to Rafael Luján. This study was also supported by a grant
  from Junta de Comunidades de Castilla-La Mancha (SBPLY/17/180501/000229 and SBPLY/21/180501/000064)
  and Universidad de Castilla-La Mancha (2023-GRIN-34187) to Rafael Luján, and Life
  Science Innovation Center (Research and Education Program for Life Science) at University
  of Fukui and JSPS KAKENHI Grant Numbers 16H04662, 17K19446, 18H05120 to Yugo Fukazawa
  and Margarita Salas fellowship from Ministerio de Universidades and Universidad
  de Castilla-La Mancha to Alejandro Martín-Belmonte. German Research Foundation (DFG
  FOR 2143) and BIOSS-2 to Akos Kulik."
article_number: e13279
article_processing_charge: Yes
article_type: original
author:
- first_name: Alejandro
  full_name: Martín‐Belmonte, Alejandro
  last_name: Martín‐Belmonte
- first_name: Carolina
  full_name: Aguado, Carolina
  last_name: Aguado
- first_name: Rocío
  full_name: Alfaro‐Ruiz, Rocío
  last_name: Alfaro‐Ruiz
- first_name: Akos
  full_name: Kulik, Akos
  last_name: Kulik
- first_name: Luis
  full_name: de la Ossa, Luis
  last_name: de la Ossa
- first_name: Ana Esther
  full_name: Moreno‐Martínez, Ana Esther
  last_name: Moreno‐Martínez
- first_name: Samuel
  full_name: Alberquilla, Samuel
  last_name: Alberquilla
- first_name: Lucía
  full_name: García‐Carracedo, Lucía
  last_name: García‐Carracedo
- first_name: Miriam
  full_name: Fernández, Miriam
  last_name: Fernández
- first_name: Ana
  full_name: Fajardo‐Serrano, Ana
  last_name: Fajardo‐Serrano
- first_name: Ester
  full_name: Aso, Ester
  last_name: Aso
- first_name: Ryuichi
  full_name: Shigemoto, Ryuichi
  id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
  last_name: Shigemoto
  orcid: 0000-0001-8761-9444
- first_name: Eduardo D.
  full_name: Martín, Eduardo D.
  last_name: Martín
- first_name: Yugo
  full_name: Fukazawa, Yugo
  last_name: Fukazawa
- first_name: Francisco
  full_name: Ciruela, Francisco
  last_name: Ciruela
- first_name: Rafael
  full_name: Luján, Rafael
  last_name: Luján
citation:
  ama: 'Martín‐Belmonte A, Aguado C, Alfaro‐Ruiz R, et al. Nanoarchitecture of CaV&#62;2.1
    channels and GABAB receptors in the mouse hippocampus: Impact of APP/PS1 pathology.
    <i>Brain Pathology</i>. 2025;35(2). doi:<a href="https://doi.org/10.1111/bpa.13279">10.1111/bpa.13279</a>'
  apa: 'Martín‐Belmonte, A., Aguado, C., Alfaro‐Ruiz, R., Kulik, A., de la Ossa, L.,
    Moreno‐Martínez, A. E., … Luján, R. (2025). Nanoarchitecture of CaV&#62;2.1 channels
    and GABAB receptors in the mouse hippocampus: Impact of APP/PS1 pathology. <i>Brain
    Pathology</i>. Wiley. <a href="https://doi.org/10.1111/bpa.13279">https://doi.org/10.1111/bpa.13279</a>'
  chicago: 'Martín‐Belmonte, Alejandro, Carolina Aguado, Rocío Alfaro‐Ruiz, Akos Kulik,
    Luis de la Ossa, Ana Esther Moreno‐Martínez, Samuel Alberquilla, et al. “Nanoarchitecture
    of CaV&#62;2.1 Channels and GABAB Receptors in the Mouse Hippocampus: Impact of
    APP/PS1 Pathology.” <i>Brain Pathology</i>. Wiley, 2025. <a href="https://doi.org/10.1111/bpa.13279">https://doi.org/10.1111/bpa.13279</a>.'
  ieee: 'A. Martín‐Belmonte <i>et al.</i>, “Nanoarchitecture of CaV&#62;2.1 channels
    and GABAB receptors in the mouse hippocampus: Impact of APP/PS1 pathology,” <i>Brain
    Pathology</i>, vol. 35, no. 2. Wiley, 2025.'
  ista: 'Martín‐Belmonte A, Aguado C, Alfaro‐Ruiz R, Kulik A, de la Ossa L, Moreno‐Martínez
    AE, Alberquilla S, García‐Carracedo L, Fernández M, Fajardo‐Serrano A, Aso E,
    Shigemoto R, Martín ED, Fukazawa Y, Ciruela F, Luján R. 2025. Nanoarchitecture
    of CaV&#62;2.1 channels and GABAB receptors in the mouse hippocampus: Impact of
    APP/PS1 pathology. Brain Pathology. 35(2), e13279.'
  mla: 'Martín‐Belmonte, Alejandro, et al. “Nanoarchitecture of CaV&#62;2.1 Channels
    and GABAB Receptors in the Mouse Hippocampus: Impact of APP/PS1 Pathology.” <i>Brain
    Pathology</i>, vol. 35, no. 2, e13279, Wiley, 2025, doi:<a href="https://doi.org/10.1111/bpa.13279">10.1111/bpa.13279</a>.'
  short: A. Martín‐Belmonte, C. Aguado, R. Alfaro‐Ruiz, A. Kulik, L. de la Ossa, A.E.
    Moreno‐Martínez, S. Alberquilla, L. García‐Carracedo, M. Fernández, A. Fajardo‐Serrano,
    E. Aso, R. Shigemoto, E.D. Martín, Y. Fukazawa, F. Ciruela, R. Luján, Brain Pathology
    35 (2025).
date_created: 2024-07-22T07:48:20Z
date_published: 2025-03-01T00:00:00Z
date_updated: 2025-05-19T13:58:12Z
day: '01'
ddc:
- '570'
department:
- _id: RySh
doi: 10.1111/bpa.13279
external_id:
  isi:
  - '001250034200001'
  pmid:
  - '38887180'
file:
- access_level: open_access
  checksum: 75a172800ab2e949abb66fba97cf70f0
  content_type: application/pdf
  creator: dernst
  date_created: 2025-04-16T09:56:08Z
  date_updated: 2025-04-16T09:56:08Z
  file_id: '19582'
  file_name: 2025_BrainPathology_MartinBelmonte.pdf
  file_size: 8767863
  relation: main_file
  success: 1
file_date_updated: 2025-04-16T09:56:08Z
has_accepted_license: '1'
intvolume: '        35'
isi: 1
issue: '2'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc-nd/4.0/
month: '03'
oa: 1
oa_version: Published Version
pmid: 1
publication: Brain Pathology
publication_identifier:
  eissn:
  - 1750-3639
  issn:
  - 1015-6305
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Nanoarchitecture of CaV>2.1 channels and GABAB receptors in the mouse hippocampus:
  Impact of APP/PS1 pathology'
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 35
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '17459'
abstract:
- lang: eng
  text: Atopic dermatitis (AD) is the most common chronic inflammatory skin disease
    worldwide. AD is a highly complex disease with different subtypes. Many elements
    of AD pathophysiology have been described, but if/how they interact with each
    other or which mechanisms are important in which patients is still unclear. Langerhans
    cells (LCs) are antigen-presenting cells (APCs) in the epidermis. Depending on
    the context, they can act either pro- or anti-inflammatory. Many different studies
    have investigated LCs in the context of AD and found them to be connected to all
    major mechanisms of AD pathophysiology. As APCs, LCs recruit other immune cells
    and shape the immune response, especially adaptive immunity via polarization of
    T cells. As sentinel cells, LCs are primary sensors of the skin microbiome and
    are important for the decision of immunity versus tolerance. LCs are also involved
    with the integrity of the skin barrier by influencing tight junctions. Finally,
    LCs are important cells in the neuro-immune crosstalk in the skin. In this review,
    we provide an overview about the many different roles of LCs in AD. Understanding
    LCs might bring us closer to a more complete understanding of this highly complex
    disease. Potentially, modulating LCs might offer new options for targeted therapies
    for AD patients.
acknowledgement: This work was supported by the CK-CARE of the KühneFoundation, Switzerland;
  the China Scholarship Counciland Shanghai Biocelline Enterprise Co. Ltd, China.
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Yi
  full_name: Pan, Yi
  last_name: Pan
- first_name: Mathias
  full_name: Hochgerner, Mathias
  last_name: Hochgerner
- first_name: Malgorzata Anna
  full_name: Cichon, Malgorzata Anna
  id: d63197a3-c188-11ed-9387-8d33a3f13871
  last_name: Cichon
- first_name: Theresa
  full_name: Benezeder, Theresa
  last_name: Benezeder
- first_name: Thomas
  full_name: Bieber, Thomas
  last_name: Bieber
- first_name: Peter
  full_name: Wolf, Peter
  last_name: Wolf
citation:
  ama: 'Pan Y, Hochgerner M, Cichon MA, Benezeder T, Bieber T, Wolf P. Langerhans
    cells: Central players in the pathophysiology of atopic dermatitis. <i>Journal
    of the European Academy of Dermatology and Venereology</i>. 2025;39(2):278-289.
    doi:<a href="https://doi.org/10.1111/jdv.20291">10.1111/jdv.20291</a>'
  apa: 'Pan, Y., Hochgerner, M., Cichon, M. A., Benezeder, T., Bieber, T., &#38; Wolf,
    P. (2025). Langerhans cells: Central players in the pathophysiology of atopic
    dermatitis. <i>Journal of the European Academy of Dermatology and Venereology</i>.
    Wiley. <a href="https://doi.org/10.1111/jdv.20291">https://doi.org/10.1111/jdv.20291</a>'
  chicago: 'Pan, Yi, Mathias Hochgerner, Malgorzata Anna Cichon, Theresa Benezeder,
    Thomas Bieber, and Peter Wolf. “Langerhans Cells: Central Players in the Pathophysiology
    of Atopic Dermatitis.” <i>Journal of the European Academy of Dermatology and Venereology</i>.
    Wiley, 2025. <a href="https://doi.org/10.1111/jdv.20291">https://doi.org/10.1111/jdv.20291</a>.'
  ieee: 'Y. Pan, M. Hochgerner, M. A. Cichon, T. Benezeder, T. Bieber, and P. Wolf,
    “Langerhans cells: Central players in the pathophysiology of atopic dermatitis,”
    <i>Journal of the European Academy of Dermatology and Venereology</i>, vol. 39,
    no. 2. Wiley, pp. 278–289, 2025.'
  ista: 'Pan Y, Hochgerner M, Cichon MA, Benezeder T, Bieber T, Wolf P. 2025. Langerhans
    cells: Central players in the pathophysiology of atopic dermatitis. Journal of
    the European Academy of Dermatology and Venereology. 39(2), 278–289.'
  mla: 'Pan, Yi, et al. “Langerhans Cells: Central Players in the Pathophysiology
    of Atopic Dermatitis.” <i>Journal of the European Academy of Dermatology and Venereology</i>,
    vol. 39, no. 2, Wiley, 2025, pp. 278–89, doi:<a href="https://doi.org/10.1111/jdv.20291">10.1111/jdv.20291</a>.'
  short: Y. Pan, M. Hochgerner, M.A. Cichon, T. Benezeder, T. Bieber, P. Wolf, Journal
    of the European Academy of Dermatology and Venereology 39 (2025) 278–289.
date_created: 2024-08-25T22:01:07Z
date_published: 2025-02-01T00:00:00Z
date_updated: 2025-05-19T13:58:50Z
day: '01'
ddc:
- '570'
department:
- _id: MiSi
doi: 10.1111/jdv.20291
external_id:
  isi:
  - '001292894900001'
  pmid:
  - '39157943'
file:
- access_level: open_access
  checksum: 12555ddb3490daf10b8d44e334e7312e
  content_type: application/pdf
  creator: dernst
  date_created: 2025-04-16T09:59:37Z
  date_updated: 2025-04-16T09:59:37Z
  file_id: '19583'
  file_name: 2025_JEADV_Pan.pdf
  file_size: 457698
  relation: main_file
  success: 1
file_date_updated: 2025-04-16T09:59:37Z
has_accepted_license: '1'
intvolume: '        39'
isi: 1
issue: '2'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: 278-289
pmid: 1
publication: Journal of the European Academy of Dermatology and Venereology
publication_identifier:
  eissn:
  - 1468-3083
  issn:
  - 0926-9959
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Langerhans cells: Central players in the pathophysiology of atopic dermatitis'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 39
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '17468'
abstract:
- lang: eng
  text: Oxygen redox chemistry is central to life1 and many human-made technologies,
    such as in energy storage2,3,4. The large energy gain from oxygen redox reactions
    is often connected with the occurrence of harmful reactive oxygen species3,5,6.
    Key species are superoxide and the highly reactive singlet oxygen3,4,5,6,7, which
    may evolve from superoxide. However, the factors determining the formation of
    singlet oxygen, rather than the relatively unreactive triplet oxygen, are unknown.
    Here we report that the release of triplet or singlet oxygen is governed by individual
    Marcus normal and inverted region behaviour. We found that as the driving force
    for the reaction increases, the initially dominant evolution of triplet oxygen
    slows down, and singlet oxygen evolution becomes predominant with higher maximum
    kinetics. This behaviour also applies to the widely observed superoxide disproportionation,
    in which one superoxide is oxidized by another, in both non-aqueous and aqueous
    systems, with Lewis and Brønsted acidity controlling the driving forces. Singlet
    oxygen yields governed by these conditions are relevant, for example, in batteries
    or cellular organelles in which superoxide forms. Our findings suggest ways to
    understand and control spin states and kinetics in oxygen redox chemistry, with
    implications for fields, including life sciences, pure chemistry and energy storage.
acknowledged_ssus:
- _id: Bio
- _id: LifeSc
- _id: M-Shop
- _id: ScienComp
acknowledgement: S.A.F. thanks the Institute of Science and Technology Austria (ISTA)
  for the support. The Scientific Service Units of ISTA supported this research through
  resources provided by the Imaging and Optics Facility, the Lab Support Facility,
  the Miba Machine Shop and Scientific Computing. This research was partly funded
  by the Austrian Science Fund (FWF) (10.55776/P37169 and 10.55776/COE5). For open
  access purposes, the author has applied for a CC BY public copyright licence to
  any author-accepted manuscript version arising from this submission. R.H. acknowledges
  funding through CZI grant DAF2020-225401 (10.37921/120055ratwvi) from the Chan Zuckerberg
  Initiative DAF, an advised fund of Silicon Valley Community Foundation (10.13039/100014989).
  H.T.K.N. acknowledges funding by the European Commission Erasmus Mundus Joint Masters
  programme. We thank M. Sixt and M. Chinon for the discussions about O-redox in life
  and R. Jethwa for proofreading. Open access funding was provided by ISTA.
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Soumyadip
  full_name: Mondal, Soumyadip
  id: d25d21ef-dc8d-11ea-abe3-ec4576307f48
  last_name: Mondal
- first_name: Huyen T.K.
  full_name: Nguyen, Huyen T.K.
  last_name: Nguyen
- first_name: Robert
  full_name: Hauschild, Robert
  id: 4E01D6B4-F248-11E8-B48F-1D18A9856A87
  last_name: Hauschild
  orcid: 0000-0001-9843-3522
- first_name: Stefan Alexander
  full_name: Freunberger, Stefan Alexander
  id: A8CA28E6-CE23-11E9-AD2D-EC27E6697425
  last_name: Freunberger
  orcid: 0000-0003-2902-5319
citation:
  ama: Mondal S, Nguyen HTK, Hauschild R, Freunberger SA. Marcus kinetics control
    singlet and triplet oxygen evolving from superoxide. <i>Nature</i>. 2025;646(8085):601–605.
    doi:<a href="https://doi.org/10.1038/s41586-025-09587-7">10.1038/s41586-025-09587-7</a>
  apa: Mondal, S., Nguyen, H. T. K., Hauschild, R., &#38; Freunberger, S. A. (2025).
    Marcus kinetics control singlet and triplet oxygen evolving from superoxide. <i>Nature</i>.
    Springer Nature. <a href="https://doi.org/10.1038/s41586-025-09587-7">https://doi.org/10.1038/s41586-025-09587-7</a>
  chicago: Mondal, Soumyadip, Huyen T.K. Nguyen, Robert Hauschild, and Stefan Alexander
    Freunberger. “Marcus Kinetics Control Singlet and Triplet Oxygen Evolving from
    Superoxide.” <i>Nature</i>. Springer Nature, 2025. <a href="https://doi.org/10.1038/s41586-025-09587-7">https://doi.org/10.1038/s41586-025-09587-7</a>.
  ieee: S. Mondal, H. T. K. Nguyen, R. Hauschild, and S. A. Freunberger, “Marcus kinetics
    control singlet and triplet oxygen evolving from superoxide,” <i>Nature</i>, vol.
    646, no. 8085. Springer Nature, pp. 601–605, 2025.
  ista: Mondal S, Nguyen HTK, Hauschild R, Freunberger SA. 2025. Marcus kinetics control
    singlet and triplet oxygen evolving from superoxide. Nature. 646(8085), 601–605.
  mla: Mondal, Soumyadip, et al. “Marcus Kinetics Control Singlet and Triplet Oxygen
    Evolving from Superoxide.” <i>Nature</i>, vol. 646, no. 8085, Springer Nature,
    2025, pp. 601–605, doi:<a href="https://doi.org/10.1038/s41586-025-09587-7">10.1038/s41586-025-09587-7</a>.
  short: S. Mondal, H.T.K. Nguyen, R. Hauschild, S.A. Freunberger, Nature 646 (2025)
    601–605.
corr_author: '1'
date_created: 2024-08-29T10:40:23Z
date_published: 2025-10-16T00:00:00Z
date_updated: 2026-04-28T13:18:33Z
day: '16'
ddc:
- '540'
department:
- _id: StFr
- _id: Bio
doi: 10.1038/s41586-025-09587-7
external_id:
  isi:
  - '001586378900001'
  pmid:
  - '41044415'
file:
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issue: '8085'
language:
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month: '10'
oa: 1
oa_version: Published Version
page: 601–605
pmid: 1
project:
- _id: 8df062be-16d5-11f0-9cad-f559b6612c7e
  grant_number: P37169
  name: Singlet oxygen in non-aqueous oxygen redox chemistry
- _id: c08e9ad1-5a5b-11eb-8a69-9d1cf3b07473
  grant_number: CZI01
  name: Tools for automation and feedback microscopy
publication: Nature
publication_identifier:
  eissn:
  - 1476-4687
  issn:
  - 0028-0836
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA website
    relation: press_release
    url: https://ista.ac.at/en/news/taming-the-bad-oxygen/
scopus_import: '1'
status: public
title: Marcus kinetics control singlet and triplet oxygen evolving from superoxide
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 646
year: '2025'
...
---
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OA_place: publisher
OA_type: hybrid
_id: '17884'
abstract:
- lang: eng
  text: Human T cell leukemia virus type 1 (HTLV-1) immature particles differ in morphology
    from other retroviruses, suggesting a distinct way of assembly. Here we report
    the results of cryo-electron tomography studies of HTLV-1 virus-like particles
    assembled in vitro, as well as derived from cells. This work shows that HTLV-1
    uses a distinct mechanism of Gag–Gag interactions to form the immature viral lattice.
    Analysis of high-resolution structural information from immature capsid (CA) tubular
    arrays reveals that the primary stabilizing component in HTLV-1 is the N-terminal
    domain of CA. Mutagenesis analysis supports this observation. This distinguishes
    HTLV-1 from other retroviruses, in which the stabilization is provided primarily
    by the C-terminal domain of CA. These results provide structural details of the
    quaternary arrangement of Gag for an immature deltaretrovirus and this helps explain
    why HTLV-1 particles are morphologically distinct.
acknowledged_ssus:
- _id: ScienComp
- _id: LifeSc
- _id: EM-Fac
acknowledgement: This work was funded by the Institute of Science and Technology Austria
  (ISTA) and the Austrian Science Fund (grant P31445 to F.K.M.S.). Access to high-resolution
  cryo-ET data acquisition at European Molecular Biology Laboratory (EMBL) Heidelberg
  was supported through the EMBL cryo-EM platform. We thank V.-V. Hodirnau at ISTA
  and W. Hagen and F. Weis at EMBL Heidelberg for support in cryo-ET data acquisition.
  This research was also supported by the scientific service units of ISTA through
  resources provided by Scientific Computing, the Life Science Facility, and the EM
  Facility. L.M.M. was supported by National Institutes of Health grants R01 GM151775
  and R21 DE032878 and by the University of Minnesota Masonic Cancer Center. D.P.
  was supported by the DOC doctoral fellowship program of the Austrian Academy of
  Sciences. R.A.D was supported by the National Institute of Allergy and Infectious
  Diseases (grant R01AI147890). The funders had no role in study design, data collection
  and analysis, decision to publish or preparation of the manuscript. Specifically,
  we also want to thank A. Schlögl for computational support and J. Hansen and V.
  Vogt for critical comments on the manuscript. We also thank the other members of
  the Schur lab for helpful discussions and experimental advice.
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Martin
  full_name: Obr, Martin
  id: 4741CA5A-F248-11E8-B48F-1D18A9856A87
  last_name: Obr
  orcid: 0000-0003-1756-6564
- first_name: Mathias
  full_name: Percipalle, Mathias
  id: 4986e21c-eb97-11eb-a6c2-a4ef0b629971
  last_name: Percipalle
- first_name: Darya
  full_name: Chernikova, Darya
  id: 7dbaf460-fa9e-11eb-b0ca-bc7c7ff21ad0
  last_name: Chernikova
- first_name: Huixin
  full_name: Yang, Huixin
  last_name: Yang
- first_name: Andreas
  full_name: Thader, Andreas
  id: 3A18A7B8-F248-11E8-B48F-1D18A9856A87
  last_name: Thader
- first_name: Gergely
  full_name: Pinke, Gergely
  id: 4D5303E6-F248-11E8-B48F-1D18A9856A87
  last_name: Pinke
- first_name: Dario J
  full_name: Porley, Dario J
  id: 2FD6EA6C-F248-11E8-B48F-1D18A9856A87
  last_name: Porley
- first_name: Louis M.
  full_name: Mansky, Louis M.
  last_name: Mansky
- first_name: Robert A.
  full_name: Dick, Robert A.
  last_name: Dick
- first_name: Florian KM
  full_name: Schur, Florian KM
  id: 48AD8942-F248-11E8-B48F-1D18A9856A87
  last_name: Schur
  orcid: 0000-0003-4790-8078
citation:
  ama: Obr M, Percipalle M, Chernikova D, et al. Distinct stabilization of the human
    T cell leukemia virus type 1 immature Gag lattice. <i>Nature Structural &#38;
    Molecular Biology</i>. 2025;32:268-276. doi:<a href="https://doi.org/10.1038/s41594-024-01390-8">10.1038/s41594-024-01390-8</a>
  apa: Obr, M., Percipalle, M., Chernikova, D., Yang, H., Thader, A., Pinke, G., …
    Schur, F. K. (2025). Distinct stabilization of the human T cell leukemia virus
    type 1 immature Gag lattice. <i>Nature Structural &#38; Molecular Biology</i>.
    Springer Nature. <a href="https://doi.org/10.1038/s41594-024-01390-8">https://doi.org/10.1038/s41594-024-01390-8</a>
  chicago: Obr, Martin, Mathias Percipalle, Darya Chernikova, Huixin Yang, Andreas
    Thader, Gergely Pinke, Darío Porley Esteves, Louis M. Mansky, Robert A. Dick,
    and Florian KM Schur. “Distinct Stabilization of the Human T Cell Leukemia Virus
    Type 1 Immature Gag Lattice.” <i>Nature Structural &#38; Molecular Biology</i>.
    Springer Nature, 2025. <a href="https://doi.org/10.1038/s41594-024-01390-8">https://doi.org/10.1038/s41594-024-01390-8</a>.
  ieee: M. Obr <i>et al.</i>, “Distinct stabilization of the human T cell leukemia
    virus type 1 immature Gag lattice,” <i>Nature Structural &#38; Molecular Biology</i>,
    vol. 32. Springer Nature, pp. 268–276, 2025.
  ista: Obr M, Percipalle M, Chernikova D, Yang H, Thader A, Pinke G, Porley Esteves
    D, Mansky LM, Dick RA, Schur FK. 2025. Distinct stabilization of the human T cell
    leukemia virus type 1 immature Gag lattice. Nature Structural &#38; Molecular
    Biology. 32, 268–276.
  mla: Obr, Martin, et al. “Distinct Stabilization of the Human T Cell Leukemia Virus
    Type 1 Immature Gag Lattice.” <i>Nature Structural &#38; Molecular Biology</i>,
    vol. 32, Springer Nature, 2025, pp. 268–76, doi:<a href="https://doi.org/10.1038/s41594-024-01390-8">10.1038/s41594-024-01390-8</a>.
  short: M. Obr, M. Percipalle, D. Chernikova, H. Yang, A. Thader, G. Pinke, D. Porley
    Esteves, L.M. Mansky, R.A. Dick, F.K. Schur, Nature Structural &#38; Molecular
    Biology 32 (2025) 268–276.
corr_author: '1'
date_created: 2024-09-08T10:29:06Z
date_published: 2025-02-01T00:00:00Z
date_updated: 2026-03-16T12:55:18Z
day: '01'
ddc:
- '570'
department:
- _id: FlSc
- _id: LeSa
doi: 10.1038/s41594-024-01390-8
external_id:
  isi:
  - '001306564000001'
  oaworkid:
  - W4402316284
  pmid:
  - '39242978'
file:
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  checksum: c641ad94afb28917b20425db676fc3ee
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language:
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month: '02'
oa: 1
oa_version: Published Version
oaworkid: 1
page: 268-276
pmid: 1
project:
- _id: 26736D6A-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P31445
  name: Structural conservation and diversity in retroviral capsid
- _id: 9B9C98E0-BA93-11EA-9121-9846C619BF3A
  grant_number: '25762'
  name: Structural characterization of spumavirus capsid assemblies to understand
    conserved Ortervirales assembly mechanisms
publication: Nature Structural & Molecular Biology
publication_identifier:
  eissn:
  - 1545-9985
  issn:
  - 1545-9993
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Distinct stabilization of the human T cell leukemia virus type 1 immature Gag
  lattice
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 32
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '18074'
abstract:
- lang: eng
  text: The Aharonov–Casher theorem is a result on the number of the so-called zero
    modes of a system described by the magnetic Pauli operator in R2. In this paper
    we address the same question for the Dirac operator on a flat two-dimensional
    manifold with boundary and Atiyah–Patodi–Singer boundary condition. More concretely
    we are interested in the plane and a disc with a finite number of circular holes
    cut out. We consider a smooth compactly supported magnetic field on the manifold
    and an arbitrary magnetic field inside the holes.
acknowledgement: "First and foremost I am grateful to Jan Philip Solovej for fruitful
  meetings during (and after) my PhD programme, when this work was done. Further I
  would like to thank Joshua Hunt, Anna Sisak, Jakub Löwit, Błażej Ruba, Volodymir
  Riabov, Lukas Schimmer and Georgios Koutentakis for valuable discussions. Many thanks
  belong to Rafael Benguria for hosting my visit, during which some of the work has
  been done. I am also grateful to Marina Prokhorova who first initiated the discussion
  of this project topic and to Annemarie Luger for her valuable comments during my
  PhD defence and in particular pointing out the qualitative difference in our two
  main results. I would like to acknowledge support for research on this paper from
  VILLUM FONDEN through the QMATH Centre of Excellence grant. nr. 10059. This project
  also received funding from the European Union’s Horizon 2020 research and innovation
  programme under the Marie Skłodowska-Curie grant agreement No 101034413. I am grateful
  to the two reviewers for reading carefully my manuscript and pointing out several
  issues contributing thus significantly to the readability and clarity of this paper.\r\nOpen
  access funding provided by Institute of Science and Technology (IST Austria)."
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Marie
  full_name: Fialova, Marie
  id: e9c9844d-9e21-11ec-b482-f96fc09f7c4d
  last_name: Fialova
citation:
  ama: Fialova M. Aharonov–Casher theorems for Dirac operators on manifolds with boundary
    and APS boundary condition. <i>Annales Henri Poincare</i>. 2025;26:2859-2900.
    doi:<a href="https://doi.org/10.1007/s00023-024-01482-7">10.1007/s00023-024-01482-7</a>
  apa: Fialova, M. (2025). Aharonov–Casher theorems for Dirac operators on manifolds
    with boundary and APS boundary condition. <i>Annales Henri Poincare</i>. Springer
    Nature. <a href="https://doi.org/10.1007/s00023-024-01482-7">https://doi.org/10.1007/s00023-024-01482-7</a>
  chicago: Fialova, Marie. “Aharonov–Casher Theorems for Dirac Operators on Manifolds
    with Boundary and APS Boundary Condition.” <i>Annales Henri Poincare</i>. Springer
    Nature, 2025. <a href="https://doi.org/10.1007/s00023-024-01482-7">https://doi.org/10.1007/s00023-024-01482-7</a>.
  ieee: M. Fialova, “Aharonov–Casher theorems for Dirac operators on manifolds with
    boundary and APS boundary condition,” <i>Annales Henri Poincare</i>, vol. 26.
    Springer Nature, pp. 2859–2900, 2025.
  ista: Fialova M. 2025. Aharonov–Casher theorems for Dirac operators on manifolds
    with boundary and APS boundary condition. Annales Henri Poincare. 26, 2859–2900.
  mla: Fialova, Marie. “Aharonov–Casher Theorems for Dirac Operators on Manifolds
    with Boundary and APS Boundary Condition.” <i>Annales Henri Poincare</i>, vol.
    26, Springer Nature, 2025, pp. 2859–900, doi:<a href="https://doi.org/10.1007/s00023-024-01482-7">10.1007/s00023-024-01482-7</a>.
  short: M. Fialova, Annales Henri Poincare 26 (2025) 2859–2900.
corr_author: '1'
date_created: 2024-09-15T22:01:42Z
date_published: 2025-08-01T00:00:00Z
date_updated: 2025-09-30T10:22:14Z
day: '01'
ddc:
- '510'
department:
- _id: RoSe
doi: 10.1007/s00023-024-01482-7
ec_funded: 1
external_id:
  arxiv:
  - '2304.13373'
  isi:
  - '001304370000001'
file:
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  checksum: d8d2d6dbce293c9ee6eaa9262e597147
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  creator: dernst
  date_created: 2025-08-05T11:24:25Z
  date_updated: 2025-08-05T11:24:25Z
  file_id: '20124'
  file_name: 2025_AnnalesHenriPoincare_Fialova.pdf
  file_size: 728124
  relation: main_file
  success: 1
file_date_updated: 2025-08-05T11:24:25Z
has_accepted_license: '1'
intvolume: '        26'
isi: 1
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: 2859-2900
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: Annales Henri Poincare
publication_identifier:
  issn:
  - 1424-0637
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Aharonov–Casher theorems for Dirac operators on manifolds with boundary and
  APS boundary condition
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 26
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18154'
abstract:
- lang: eng
  text: 'In 1976, Deligne and Lusztig realized the representation theory of finite
    groups of Lie type inside étale cohomology of certain algebraic varieties. Recently,
    a p-adic version of this theory started to emerge: there are p-adic Deligne–Lusztig
    spaces, whose cohomology encodes representation theoretic information for p-adic
    groups – for instance, it partially realizes the local Langlands correspondence
    with characteristic zero coefficients. However, the parallel case of coefficients
    of positive characteristic  ℓ≠p has not been inspected so far. The purpose of
    this article is to initiate such an inspection. In particular, we relate cohomology
    of certain p-adic Deligne–Lusztig spaces to Vignéras''s modular local Langlands
    correspondence for GLn.'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Jakub
  full_name: Löwit, Jakub
  id: e3b80ae2-eb8e-11eb-b029-9aef4a9108a0
  last_name: Löwit
citation:
  ama: Löwit J. On modulo ℓ cohomology of p-adic Deligne–Lusztig varieties for GLn.
    <i>Journal of Algebra</i>. 2025;663(2):81-118. doi:<a href="https://doi.org/10.1016/j.jalgebra.2024.08.033">10.1016/j.jalgebra.2024.08.033</a>
  apa: Löwit, J. (2025). On modulo ℓ cohomology of p-adic Deligne–Lusztig varieties
    for GLn. <i>Journal of Algebra</i>. Elsevier. <a href="https://doi.org/10.1016/j.jalgebra.2024.08.033">https://doi.org/10.1016/j.jalgebra.2024.08.033</a>
  chicago: Löwit, Jakub. “On modulo ℓ Cohomology of P-Adic Deligne–Lusztig Varieties
    for GLn.” <i>Journal of Algebra</i>. Elsevier, 2025. <a href="https://doi.org/10.1016/j.jalgebra.2024.08.033">https://doi.org/10.1016/j.jalgebra.2024.08.033</a>.
  ieee: J. Löwit, “On modulo ℓ cohomology of p-adic Deligne–Lusztig varieties for
    GLn,” <i>Journal of Algebra</i>, vol. 663, no. 2. Elsevier, pp. 81–118, 2025.
  ista: Löwit J. 2025. On modulo ℓ cohomology of p-adic Deligne–Lusztig varieties
    for GLn. Journal of Algebra. 663(2), 81–118.
  mla: Löwit, Jakub. “On modulo ℓ Cohomology of P-Adic Deligne–Lusztig Varieties for
    GLn.” <i>Journal of Algebra</i>, vol. 663, no. 2, Elsevier, 2025, pp. 81–118,
    doi:<a href="https://doi.org/10.1016/j.jalgebra.2024.08.033">10.1016/j.jalgebra.2024.08.033</a>.
  short: J. Löwit, Journal of Algebra 663 (2025) 81–118.
corr_author: '1'
date_created: 2024-09-29T22:01:37Z
date_published: 2025-02-01T00:00:00Z
date_updated: 2025-02-27T12:32:40Z
day: '01'
ddc:
- '510'
department:
- _id: TaHa
doi: 10.1016/j.jalgebra.2024.08.033
external_id:
  arxiv:
  - '2404.11176'
  isi:
  - '001325207800001'
file:
- access_level: open_access
  checksum: eb240e93c178e48429ad918c9058f1fe
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  creator: dernst
  date_created: 2025-01-13T08:57:57Z
  date_updated: 2025-01-13T08:57:57Z
  file_id: '18830'
  file_name: 2024_JourAlgebra_Loewit.pdf
  file_size: 731175
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file_date_updated: 2025-01-13T08:57:57Z
has_accepted_license: '1'
intvolume: '       663'
isi: 1
issue: '2'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: 81-118
publication: Journal of Algebra
publication_identifier:
  eissn:
  - 1090-266X
  issn:
  - 0021-8693
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: On modulo ℓ cohomology of p-adic Deligne–Lusztig varieties for GLn
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 663
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18157'
abstract:
- lang: eng
  text: "Interest in sliding block puzzles dates back to the 15-puzzle, seemingly
    invented by Noyes Chapman in 1874 (see [23] for an account of the fascinating
    history of the puzzle). The game consists of fifteen movable square blocks numbered
    \r\n and arranged within a \r\n square box, leaving one empty space (see Figure
    1). The task at hand is to start from a given configuration of the numbered blocks
    and reach the desired target configuration, where the only allowed move is to
    slide a numbered block into an adjacent empty space. This task seemed to be unpredictably
    either very easy to accomplish, or completely impossible, and the puzzle turned
    into a worldwide sensation in the spring of 1880. A particularly challenging instance,
    known as the 13-15-14 puzzle, consisted of initial and target configurations that
    differed by a single swap (historically this swap involved the blocks labeled
    14 and 15). The craze of this puzzle was such that it consistently made newspaper
    headlines in 1880, with an article in the New York Times lamenting that it was
    “threatening our free institutions” [23, p. 9]. Various prizes were offered for
    anyone who could solve this challenge, beginning with a $25 set of teeth and culminating
    with Sam Loyd’s famous $1,000 cash prize."
acknowledgement: Open access funding provided by Copenhagen University.
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Florestan R
  full_name: Brunck, Florestan R
  id: 6ab6e556-f394-11eb-9cf6-9dfb78f00d8d
  last_name: Brunck
- first_name: Matthew Alan
  full_name: Kwan, Matthew Alan
  id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3
  last_name: Kwan
  orcid: 0000-0002-4003-7567
citation:
  ama: 'Brunck FR, Kwan MA. Books, Hallways, and social butterflies: A note on sliding
    block puzzles. <i>Mathematical Intelligencer</i>. 2025;47:52-65. doi:<a href="https://doi.org/10.1007/s00283-024-10358-x">10.1007/s00283-024-10358-x</a>'
  apa: 'Brunck, F. R., &#38; Kwan, M. A. (2025). Books, Hallways, and social butterflies:
    A note on sliding block puzzles. <i>Mathematical Intelligencer</i>. Springer Nature.
    <a href="https://doi.org/10.1007/s00283-024-10358-x">https://doi.org/10.1007/s00283-024-10358-x</a>'
  chicago: 'Brunck, Florestan R, and Matthew Alan Kwan. “Books, Hallways, and Social
    Butterflies: A Note on Sliding Block Puzzles.” <i>Mathematical Intelligencer</i>.
    Springer Nature, 2025. <a href="https://doi.org/10.1007/s00283-024-10358-x">https://doi.org/10.1007/s00283-024-10358-x</a>.'
  ieee: 'F. R. Brunck and M. A. Kwan, “Books, Hallways, and social butterflies: A
    note on sliding block puzzles,” <i>Mathematical Intelligencer</i>, vol. 47. Springer
    Nature, pp. 52–65, 2025.'
  ista: 'Brunck FR, Kwan MA. 2025. Books, Hallways, and social butterflies: A note
    on sliding block puzzles. Mathematical Intelligencer. 47, 52–65.'
  mla: 'Brunck, Florestan R., and Matthew Alan Kwan. “Books, Hallways, and Social
    Butterflies: A Note on Sliding Block Puzzles.” <i>Mathematical Intelligencer</i>,
    vol. 47, Springer Nature, 2025, pp. 52–65, doi:<a href="https://doi.org/10.1007/s00283-024-10358-x">10.1007/s00283-024-10358-x</a>.'
  short: F.R. Brunck, M.A. Kwan, Mathematical Intelligencer 47 (2025) 52–65.
date_created: 2024-09-29T22:01:38Z
date_published: 2025-03-01T00:00:00Z
date_updated: 2025-05-19T14:00:09Z
day: '01'
ddc:
- '510'
department:
- _id: UlWa
- _id: MaKw
doi: 10.1007/s00283-024-10358-x
external_id:
  arxiv:
  - '2303.09459'
  isi:
  - '001318056000001'
file:
- access_level: open_access
  checksum: c932ebe45c460d4a73f5b2dcca643db1
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  date_updated: 2025-04-08T11:17:45Z
  file_id: '19530'
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  file_size: 1760643
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file_date_updated: 2025-04-08T11:17:45Z
has_accepted_license: '1'
intvolume: '        47'
isi: 1
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
page: 52-65
publication: Mathematical Intelligencer
publication_identifier:
  issn:
  - 0343-6993
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Books, Hallways, and social butterflies: A note on sliding block puzzles'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 47
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18169'
abstract:
- lang: eng
  text: "As the complexity and criticality of software increase every year, so does
    the importance of runtime monitoring. Third-party and best-effort monitoring are
    especially valuable, yet under-explored areas of runtime monitoring. In this context,
    third-party monitoring means monitoring with a limited knowledge of the monitored
    software (as it has been developed by a third party). Best-effort monitoring keeps
    pace with the monitored software at the cost of possibly imprecise verdicts when
    keeping up with the monitored software would not be feasible. Most existing monitoring
    frameworks do not support the combination of third-party and best-effort monitoring
    because they either require the full access to the monitored code or the ability
    to process all observable events, or both.\r\nWe present a middleware framework,
    Vamos, for the runtime monitoring of software. Vamos is explicitly designed to
    support third-party and best-effort scenarios. The design goals of Vamos are (i)
    efficiency (tracing events with low overhead), (ii) flexibility (the ability to
    monitor a variety of different event channels, and to connect to a wide range
    of monitors), and (iii) ease-of-use. To achieve its goals, Vamos combines aspects
    of event broker and event recognition systems with aspects of stream processing
    systems.\r\nWe implemented a prototype toolchain for Vamos and conducted a set
    of experiments demonstrating the usability of the scheme. The results indicate
    that Vamos enables writing useful yet efficient monitors, and simplifies key aspects
    of setting up a monitoring system from scratch."
acknowledgement: This work was supported in part by the ERC-2020-AdG 101020093. The
  authors would like to thank the STTT reviewers for their valuable feedback and suggestions.
article_number: '103212'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Marek
  full_name: Chalupa, Marek
  id: 87e34708-d6c6-11ec-9f5b-9391e7be2463
  last_name: Chalupa
- first_name: Fabian
  full_name: Mühlböck, Fabian
  id: 6395C5F6-89DF-11E9-9C97-6BDFE5697425
  last_name: Mühlböck
  orcid: 0000-0003-1548-0177
- first_name: Stefanie
  full_name: Muroya Lei, Stefanie
  id: a376de31-8972-11ed-ae7b-d0251c13c8ff
  last_name: Muroya Lei
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000-0002-2985-7724
citation:
  ama: 'Chalupa M, Mühlböck F, Muroya Lei S, Henzinger TA. VAMOS: Middleware for best-effort
    third-party monitoring. <i>Science of Computer Programming</i>. 2025;240(2). doi:<a
    href="https://doi.org/10.1016/j.scico.2024.103212">10.1016/j.scico.2024.103212</a>'
  apa: 'Chalupa, M., Mühlböck, F., Muroya Lei, S., &#38; Henzinger, T. A. (2025).
    VAMOS: Middleware for best-effort third-party monitoring. <i>Science of Computer
    Programming</i>. Elsevier. <a href="https://doi.org/10.1016/j.scico.2024.103212">https://doi.org/10.1016/j.scico.2024.103212</a>'
  chicago: 'Chalupa, Marek, Fabian Mühlböck, Stefanie Muroya Lei, and Thomas A Henzinger.
    “VAMOS: Middleware for Best-Effort Third-Party Monitoring.” <i>Science of Computer
    Programming</i>. Elsevier, 2025. <a href="https://doi.org/10.1016/j.scico.2024.103212">https://doi.org/10.1016/j.scico.2024.103212</a>.'
  ieee: 'M. Chalupa, F. Mühlböck, S. Muroya Lei, and T. A. Henzinger, “VAMOS: Middleware
    for best-effort third-party monitoring,” <i>Science of Computer Programming</i>,
    vol. 240, no. 2. Elsevier, 2025.'
  ista: 'Chalupa M, Mühlböck F, Muroya Lei S, Henzinger TA. 2025. VAMOS: Middleware
    for best-effort third-party monitoring. Science of Computer Programming. 240(2),
    103212.'
  mla: 'Chalupa, Marek, et al. “VAMOS: Middleware for Best-Effort Third-Party Monitoring.”
    <i>Science of Computer Programming</i>, vol. 240, no. 2, 103212, Elsevier, 2025,
    doi:<a href="https://doi.org/10.1016/j.scico.2024.103212">10.1016/j.scico.2024.103212</a>.'
  short: M. Chalupa, F. Mühlböck, S. Muroya Lei, T.A. Henzinger, Science of Computer
    Programming 240 (2025).
corr_author: '1'
date_created: 2024-10-06T22:01:10Z
date_published: 2025-02-01T00:00:00Z
date_updated: 2025-09-09T12:25:29Z
day: '01'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.1016/j.scico.2024.103212
ec_funded: 1
external_id:
  isi:
  - '001327852600001'
file:
- access_level: open_access
  checksum: cd93c0c356e479ffccfbe8499b6ba8e2
  content_type: application/pdf
  creator: dernst
  date_created: 2025-01-13T09:02:47Z
  date_updated: 2025-01-13T09:02:47Z
  file_id: '18831'
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  file_size: 1173677
  relation: main_file
  success: 1
file_date_updated: 2025-01-13T09:02:47Z
has_accepted_license: '1'
intvolume: '       240'
isi: 1
issue: '2'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
  call_identifier: H2020
  grant_number: '101020093'
  name: Vigilant Algorithmic Monitoring of Software
publication: Science of Computer Programming
publication_identifier:
  issn:
  - 0167-6423
publication_status: published
publisher: Elsevier
quality_controlled: '1'
related_material:
  record:
  - id: '12856'
    relation: earlier_version
    status: public
scopus_import: '1'
status: public
title: 'VAMOS: Middleware for best-effort third-party monitoring'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 240
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18170'
abstract:
- lang: eng
  text: 'This study presents a graphene field-effect transistor (gFET) biosensor with
    dual detection capabilities for SARS-CoV-2: one RNA detection assay to confirm
    viral positivity and the other for nucleocapsid (N-)protein detection as a proxy
    for infectiousness of the patient. This technology can be rapidly adapted to emerging
    infectious diseases, making an essential tool to contain future pandemics. To
    detect viral RNA, the highly conserved E-gene of the virus was targeted, allowing
    for the determination of SARS-CoV-2 presence or absence using nasopharyngeal swab
    samples. For N-protein detection, specific antibodies were used. Tested on 213
    clinical nasopharyngeal samples, the gFET biosensor showed good correlation with
    RT-PCR cycle threshold values, proving its high sensitivity in detecting SARS-CoV-2
    RNA. Specificity was confirmed using 21 pre-pandemic samples positive for other
    respiratory viruses. The gFET biosensor had a limit of detection (LOD) for N-protein
    of 0.9 pM, establishing a foundation for the development of a sensitive tool for
    monitoring active viral infection. Results of gFET based N-protein detection corresponded
    to the results of virus culture in all 16 available clinical samples and thus
    it also proved its capability to serve as a proxy for infectivity. Overall, these
    findings support the potential of the gFET biosensor as a point-of-care device
    for rapid diagnosis of SARS-CoV-2 infection and indirect assessment of infectiousness
    in patients, providing additional information for clinical and public health decision-making.'
acknowledgement: 'This research was funded in whole by the Austrian Science Fund (FWF)
  [P 35103-B, Grant-DOI: 10.55776/P35103]. For open access purposes, the author has
  applied a CC BY public copyright license to any author-accepted manuscript version
  arising from this submission. We would like to thank Olfert Landt for advice on
  ssDNA probe design; Rui Qiang Chen, Jennifer Stock, and Christine Wukotitsch for
  their excellent support with ONT sequencing; Christoph Köppl and Andreas Fischer
  for excellent support in recombinant N protein expression and purification; and
  the whole team at the division of clinical virology for their support with standard
  diagnostics.'
article_number: '116807'
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Anna Nele
  full_name: Herdina, Anna Nele
  last_name: Herdina
- first_name: Anil
  full_name: Bozdogan, Anil
  last_name: Bozdogan
- first_name: Patrik
  full_name: Aspermair, Patrik
  last_name: Aspermair
- first_name: Jakub
  full_name: Dostalek, Jakub
  last_name: Dostalek
- first_name: Miriam
  full_name: Klausberger, Miriam
  last_name: Klausberger
- first_name: Nico
  full_name: Lingg, Nico
  last_name: Lingg
- first_name: Monika
  full_name: Cserjan-Puschmann, Monika
  last_name: Cserjan-Puschmann
- first_name: Patricia Pereira
  full_name: Aguilar, Patricia Pereira
  last_name: Aguilar
- first_name: Simone
  full_name: Auer, Simone
  last_name: Auer
- first_name: Halil
  full_name: Demirtas, Halil
  last_name: Demirtas
- first_name: Jakob
  full_name: Andersson, Jakob
  id: 3a5f4167-9bd9-11ed-bd12-a1446d38776f
  last_name: Andersson
- first_name: Felix
  full_name: Lötsch, Felix
  last_name: Lötsch
- first_name: Barbara
  full_name: Holzer, Barbara
  last_name: Holzer
- first_name: Adi
  full_name: Steinrigl, Adi
  last_name: Steinrigl
- first_name: Florian
  full_name: Thalhammer, Florian
  last_name: Thalhammer
- first_name: Julia
  full_name: Schellnegger, Julia
  last_name: Schellnegger
- first_name: Monika
  full_name: Breuer, Monika
  last_name: Breuer
- first_name: Wolfgang
  full_name: Knoll, Wolfgang
  last_name: Knoll
- first_name: Robert
  full_name: Strassl, Robert
  last_name: Strassl
citation:
  ama: 'Herdina AN, Bozdogan A, Aspermair P, et al. Bridging basic science and applied
    diagnostics: Comprehensive viral diagnostics enabled by graphene-based electronic
    biosensor technology advancements. <i>Biosensors and Bioelectronics</i>. 2025;267.
    doi:<a href="https://doi.org/10.1016/j.bios.2024.116807">10.1016/j.bios.2024.116807</a>'
  apa: 'Herdina, A. N., Bozdogan, A., Aspermair, P., Dostalek, J., Klausberger, M.,
    Lingg, N., … Strassl, R. (2025). Bridging basic science and applied diagnostics:
    Comprehensive viral diagnostics enabled by graphene-based electronic biosensor
    technology advancements. <i>Biosensors and Bioelectronics</i>. Elsevier. <a href="https://doi.org/10.1016/j.bios.2024.116807">https://doi.org/10.1016/j.bios.2024.116807</a>'
  chicago: 'Herdina, Anna Nele, Anil Bozdogan, Patrik Aspermair, Jakub Dostalek, Miriam
    Klausberger, Nico Lingg, Monika Cserjan-Puschmann, et al. “Bridging Basic Science
    and Applied Diagnostics: Comprehensive Viral Diagnostics Enabled by Graphene-Based
    Electronic Biosensor Technology Advancements.” <i>Biosensors and Bioelectronics</i>.
    Elsevier, 2025. <a href="https://doi.org/10.1016/j.bios.2024.116807">https://doi.org/10.1016/j.bios.2024.116807</a>.'
  ieee: 'A. N. Herdina <i>et al.</i>, “Bridging basic science and applied diagnostics:
    Comprehensive viral diagnostics enabled by graphene-based electronic biosensor
    technology advancements,” <i>Biosensors and Bioelectronics</i>, vol. 267. Elsevier,
    2025.'
  ista: 'Herdina AN, Bozdogan A, Aspermair P, Dostalek J, Klausberger M, Lingg N,
    Cserjan-Puschmann M, Aguilar PP, Auer S, Demirtas H, Andersson J, Lötsch F, Holzer
    B, Steinrigl A, Thalhammer F, Schellnegger J, Breuer M, Knoll W, Strassl R. 2025.
    Bridging basic science and applied diagnostics: Comprehensive viral diagnostics
    enabled by graphene-based electronic biosensor technology advancements. Biosensors
    and Bioelectronics. 267, 116807.'
  mla: 'Herdina, Anna Nele, et al. “Bridging Basic Science and Applied Diagnostics:
    Comprehensive Viral Diagnostics Enabled by Graphene-Based Electronic Biosensor
    Technology Advancements.” <i>Biosensors and Bioelectronics</i>, vol. 267, 116807,
    Elsevier, 2025, doi:<a href="https://doi.org/10.1016/j.bios.2024.116807">10.1016/j.bios.2024.116807</a>.'
  short: A.N. Herdina, A. Bozdogan, P. Aspermair, J. Dostalek, M. Klausberger, N.
    Lingg, M. Cserjan-Puschmann, P.P. Aguilar, S. Auer, H. Demirtas, J. Andersson,
    F. Lötsch, B. Holzer, A. Steinrigl, F. Thalhammer, J. Schellnegger, M. Breuer,
    W. Knoll, R. Strassl, Biosensors and Bioelectronics 267 (2025).
date_created: 2024-10-06T22:01:11Z
date_published: 2025-01-01T00:00:00Z
date_updated: 2025-02-27T12:34:07Z
day: '01'
ddc:
- '570'
department:
- _id: LeSa
doi: 10.1016/j.bios.2024.116807
external_id:
  isi:
  - '001328413700001'
  pmid:
  - '39341071'
file:
- access_level: open_access
  checksum: 208ac27dab27af792d198fcb74af8756
  content_type: application/pdf
  creator: dernst
  date_created: 2025-01-13T11:14:32Z
  date_updated: 2025-01-13T11:14:32Z
  file_id: '18843'
  file_name: 2025_BiosensorsBioelectronics_Herdina.pdf
  file_size: 4135372
  relation: main_file
  success: 1
file_date_updated: 2025-01-13T11:14:32Z
has_accepted_license: '1'
intvolume: '       267'
isi: 1
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
pmid: 1
publication: Biosensors and Bioelectronics
publication_identifier:
  eissn:
  - 1873-4235
  issn:
  - 0956-5663
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Bridging basic science and applied diagnostics: Comprehensive viral diagnostics
  enabled by graphene-based electronic biosensor technology advancements'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 267
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '22021'
abstract:
- lang: eng
  text: "We establish global well-posedness for both the defocusing and\r\nfocusing
    complex-valued modified Korteweg–de Vries equations on the real line\r\nin modulation
    spaces Ms,2p (R), for all 1 \x14 p < 1 and 0 \x14 s < 3/2 − 1/p. We\r\nwill also
    show that such solutions admit global-in-time bounds in these spaces\r\nand that
    equicontinuous sets of initial data lead to equicontinuous ensembles\r\nof orbits.
    Indeed, such information forms a crucial part of our well-posedness\r\nargument."
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Saikatul
  full_name: Haque, Saikatul
  last_name: Haque
- first_name: Rowan
  full_name: Killip, Rowan
  last_name: Killip
- first_name: Monica
  full_name: Visan, Monica
  id: 056daca0-b8d1-11f0-964f-f91054abf8ca
  last_name: Visan
- first_name: Yunfeng
  full_name: Zhang, Yunfeng
  last_name: Zhang
citation:
  ama: Haque S, Killip R, Vişan M, Zhang Y.  Global well-posedness and equicontinuity
    for modified Korteweg–de Vries equations in modulation spaces. <i>Pure and Applied
    Analysis</i>. 2025;7(3):615-637. doi:<a href="https://doi.org/10.2140/paa.2025.7.615">10.2140/paa.2025.7.615</a>
  apa: Haque, S., Killip, R., Vişan, M., &#38; Zhang, Y. (2025).  Global well-posedness
    and equicontinuity for modified Korteweg–de Vries equations in modulation spaces.
    <i>Pure and Applied Analysis</i>. Mathematical Sciences Publishers. <a href="https://doi.org/10.2140/paa.2025.7.615">https://doi.org/10.2140/paa.2025.7.615</a>
  chicago: Haque, Saikatul, Rowan Killip, Monica Vişan, and Yunfeng Zhang. “ Global
    Well-Posedness and Equicontinuity for Modified Korteweg–de Vries Equations in
    Modulation Spaces.” <i>Pure and Applied Analysis</i>. Mathematical Sciences Publishers,
    2025. <a href="https://doi.org/10.2140/paa.2025.7.615">https://doi.org/10.2140/paa.2025.7.615</a>.
  ieee: S. Haque, R. Killip, M. Vişan, and Y. Zhang, “ Global well-posedness and equicontinuity
    for modified Korteweg–de Vries equations in modulation spaces,” <i>Pure and Applied
    Analysis</i>, vol. 7, no. 3. Mathematical Sciences Publishers, pp. 615–637, 2025.
  ista: Haque S, Killip R, Vişan M, Zhang Y. 2025.  Global well-posedness and equicontinuity
    for modified Korteweg–de Vries equations in modulation spaces. Pure and Applied
    Analysis. 7(3), 615–637.
  mla: Haque, Saikatul, et al. “ Global Well-Posedness and Equicontinuity for Modified
    Korteweg–de Vries Equations in Modulation Spaces.” <i>Pure and Applied Analysis</i>,
    vol. 7, no. 3, Mathematical Sciences Publishers, 2025, pp. 615–37, doi:<a href="https://doi.org/10.2140/paa.2025.7.615">10.2140/paa.2025.7.615</a>.
  short: S. Haque, R. Killip, M. Vişan, Y. Zhang, Pure and Applied Analysis 7 (2025)
    615–637.
das_tickbox: '1'
date_created: 2026-06-19T07:30:23Z
date_published: 2025-06-18T00:00:00Z
date_updated: 2026-06-24T13:22:40Z
day: '18'
doi: 10.2140/paa.2025.7.615
extern: '1'
external_id:
  arxiv:
  - '2411.05300'
intvolume: '         7'
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2411.05300
mathsc:
- 35Q53
- 35Q55
- 37K10
month: '06'
oa: 1
oa_version: Preprint
page: 615-637
publication: Pure and Applied Analysis
publication_identifier:
  eissn:
  - 2578-5885
  issn:
  - 2578-5893
publication_status: published
publisher: Mathematical Sciences Publishers
quality_controlled: '1'
scopus_import: '1'
status: public
title: ' Global well-posedness and equicontinuity for modified Korteweg–de Vries equations
  in modulation spaces'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 7
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '22027'
abstract:
- lang: eng
  text: We demonstrate that in three space dimensions, the scattering behaviour of
    semilinear wave equations with quintic-type nonlinearities uniquely determines
    the nonlinearity. The nonlinearity is permitted to depend on both space and time.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Nicholas
  full_name: Hu, Nicholas
  last_name: Hu
- first_name: Rowan
  full_name: Killip, Rowan
  last_name: Killip
- first_name: Monica
  full_name: Visan, Monica
  id: 056daca0-b8d1-11f0-964f-f91054abf8ca
  last_name: Visan
citation:
  ama: Hu N, Killip R, Vişan M. Deconvolutional determination of the nonlinearity
    in a semilinear wave equation. <i>Pure and Applied Analysis</i>. 2025;7(1):1-17.
    doi:<a href="https://doi.org/10.2140/paa.2025.7.1">10.2140/paa.2025.7.1</a>
  apa: Hu, N., Killip, R., &#38; Vişan, M. (2025). Deconvolutional determination of
    the nonlinearity in a semilinear wave equation. <i>Pure and Applied Analysis</i>.
    Mathematical Sciences Publishers. <a href="https://doi.org/10.2140/paa.2025.7.1">https://doi.org/10.2140/paa.2025.7.1</a>
  chicago: Hu, Nicholas, Rowan Killip, and Monica Vişan. “Deconvolutional Determination
    of the Nonlinearity in a Semilinear Wave Equation.” <i>Pure and Applied Analysis</i>.
    Mathematical Sciences Publishers, 2025. <a href="https://doi.org/10.2140/paa.2025.7.1">https://doi.org/10.2140/paa.2025.7.1</a>.
  ieee: N. Hu, R. Killip, and M. Vişan, “Deconvolutional determination of the nonlinearity
    in a semilinear wave equation,” <i>Pure and Applied Analysis</i>, vol. 7, no.
    1. Mathematical Sciences Publishers, pp. 1–17, 2025.
  ista: Hu N, Killip R, Vişan M. 2025. Deconvolutional determination of the nonlinearity
    in a semilinear wave equation. Pure and Applied Analysis. 7(1), 1–17.
  mla: Hu, Nicholas, et al. “Deconvolutional Determination of the Nonlinearity in
    a Semilinear Wave Equation.” <i>Pure and Applied Analysis</i>, vol. 7, no. 1,
    Mathematical Sciences Publishers, 2025, pp. 1–17, doi:<a href="https://doi.org/10.2140/paa.2025.7.1">10.2140/paa.2025.7.1</a>.
  short: N. Hu, R. Killip, M. Vişan, Pure and Applied Analysis 7 (2025) 1–17.
date_created: 2026-06-19T07:36:00Z
date_published: 2025-01-22T00:00:00Z
date_updated: 2026-06-24T13:24:38Z
day: '22'
doi: 10.2140/paa.2025.7.1
extern: '1'
external_id:
  arxiv:
  - '2307.00829'
intvolume: '         7'
issue: '1'
keyword:
- dispersive equations
- nonlinear wave equation
- semilinear wave equation
- scattering
- inverse scattering
- deconvolution
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2307.00829
mathsc:
- 35L70
- 35P25
- 35R30
month: '01'
oa: 1
oa_version: Preprint
page: 1-17
publication: Pure and Applied Analysis
publication_identifier:
  eissn:
  - 2578-5885
  issn:
  - 2578-5893
publication_status: published
publisher: Mathematical Sciences Publishers
quality_controlled: '1'
scopus_import: '1'
status: public
title: Deconvolutional determination of the nonlinearity in a semilinear wave equation
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 7
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '22044'
abstract:
- lang: eng
  text: We prove that the small-data scattering map uniquely determines the nonlinearity
    for a wide class of gauge-invariant, intercritical nonlinear Schrödinger equations.
    We use the Born approximation to reduce the analysis to a deconvolution problem
    involving the distribution function for linear Schrödinger solutions. We then
    solve this deconvolution problem using the Beurling–Lax Theorem.
article_number: '015021'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Rowan
  full_name: Killip, Rowan
  last_name: Killip
- first_name: Jason
  full_name: Murphy, Jason
  last_name: Murphy
- first_name: Monica
  full_name: Visan, Monica
  id: 056daca0-b8d1-11f0-964f-f91054abf8ca
  last_name: Visan
citation:
  ama: Killip R, Murphy J, Vişan M. Determination of Schrödinger nonlinearities from
    the scattering map. <i>Nonlinearity</i>. 2025;38(1). doi:<a href="https://doi.org/10.1088/1361-6544/ada1bf">10.1088/1361-6544/ada1bf</a>
  apa: Killip, R., Murphy, J., &#38; Vişan, M. (2025). Determination of Schrödinger
    nonlinearities from the scattering map. <i>Nonlinearity</i>. IOP Publishing. <a
    href="https://doi.org/10.1088/1361-6544/ada1bf">https://doi.org/10.1088/1361-6544/ada1bf</a>
  chicago: Killip, Rowan, Jason Murphy, and Monica Vişan. “Determination of Schrödinger
    Nonlinearities from the Scattering Map.” <i>Nonlinearity</i>. IOP Publishing,
    2025. <a href="https://doi.org/10.1088/1361-6544/ada1bf">https://doi.org/10.1088/1361-6544/ada1bf</a>.
  ieee: R. Killip, J. Murphy, and M. Vişan, “Determination of Schrödinger nonlinearities
    from the scattering map,” <i>Nonlinearity</i>, vol. 38, no. 1. IOP Publishing,
    2025.
  ista: Killip R, Murphy J, Vişan M. 2025. Determination of Schrödinger nonlinearities
    from the scattering map. Nonlinearity. 38(1), 015021.
  mla: Killip, Rowan, et al. “Determination of Schrödinger Nonlinearities from the
    Scattering Map.” <i>Nonlinearity</i>, vol. 38, no. 1, 015021, IOP Publishing,
    2025, doi:<a href="https://doi.org/10.1088/1361-6544/ada1bf">10.1088/1361-6544/ada1bf</a>.
  short: R. Killip, J. Murphy, M. Vişan, Nonlinearity 38 (2025).
das_tickbox: '1'
date_created: 2026-06-19T07:47:06Z
date_published: 2025-01-01T00:00:00Z
date_updated: 2026-06-25T07:46:14Z
day: '01'
doi: 10.1088/1361-6544/ada1bf
extern: '1'
external_id:
  arxiv:
  - '2402.03218'
intvolume: '        38'
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2402.03218
month: '01'
oa: 1
oa_version: Preprint
publication: Nonlinearity
publication_identifier:
  eissn:
  - 1361-6544
  issn:
  - 0951-7715
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Determination of Schrödinger nonlinearities from the scattering map
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 38
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '22069'
abstract:
- lang: eng
  text: "For slowly-varying initial data, solutions to the Ablowitz–Ladik system have
    been proven to converge to solutions of the cubic Schrödinger equation. In this
    paper we show that in the continuum limit, solutions to the Ablowitz–Ladik system
    with H^1 initial data may also converge to solutions of the modified Korteweg–de
    Vries equation. To exhibit this new limiting behavior, it suffices that the initial
    data is supported near the inflection points of the dispersion relation associated
    with the Ablowitz–Ladik system.\r\n\r\nOur arguments employ harmonic analysis
    tools, Strichartz estimates, and the conservation of mass and energy. Correspondingly,
    they are applicable beyond the completely integrable models of greatest interest
    to us."
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Rowan
  full_name: Killip, Rowan
  last_name: Killip
- first_name: Zhimeng
  full_name: Ouyang, Zhimeng
  last_name: Ouyang
- first_name: Monica
  full_name: Visan, Monica
  id: 056daca0-b8d1-11f0-964f-f91054abf8ca
  last_name: Visan
- first_name: Lei
  full_name: Wu, Lei
  last_name: Wu
citation:
  ama: Killip R, Ouyang Z, Vişan M, Wu L. The modified Korteweg–de Vries limit of
    the Ablowitz–Ladik system. <i>Discrete and Continuous Dynamical Systems</i>. 2025;45(3):821-846.
    doi:<a href="https://doi.org/10.3934/dcds.2024114">10.3934/dcds.2024114</a>
  apa: Killip, R., Ouyang, Z., Vişan, M., &#38; Wu, L. (2025). The modified Korteweg–de
    Vries limit of the Ablowitz–Ladik system. <i>Discrete and Continuous Dynamical
    Systems</i>. American Institute of Mathematical Sciences. <a href="https://doi.org/10.3934/dcds.2024114">https://doi.org/10.3934/dcds.2024114</a>
  chicago: Killip, Rowan, Zhimeng Ouyang, Monica Vişan, and Lei Wu. “The Modified
    Korteweg–de Vries Limit of the Ablowitz–Ladik System.” <i>Discrete and Continuous
    Dynamical Systems</i>. American Institute of Mathematical Sciences, 2025. <a href="https://doi.org/10.3934/dcds.2024114">https://doi.org/10.3934/dcds.2024114</a>.
  ieee: R. Killip, Z. Ouyang, M. Vişan, and L. Wu, “The modified Korteweg–de Vries
    limit of the Ablowitz–Ladik system,” <i>Discrete and Continuous Dynamical Systems</i>,
    vol. 45, no. 3. American Institute of Mathematical Sciences, pp. 821–846, 2025.
  ista: Killip R, Ouyang Z, Vişan M, Wu L. 2025. The modified Korteweg–de Vries limit
    of the Ablowitz–Ladik system. Discrete and Continuous Dynamical Systems. 45(3),
    821–846.
  mla: Killip, Rowan, et al. “The Modified Korteweg–de Vries Limit of the Ablowitz–Ladik
    System.” <i>Discrete and Continuous Dynamical Systems</i>, vol. 45, no. 3, American
    Institute of Mathematical Sciences, 2025, pp. 821–46, doi:<a href="https://doi.org/10.3934/dcds.2024114">10.3934/dcds.2024114</a>.
  short: R. Killip, Z. Ouyang, M. Vişan, L. Wu, Discrete and Continuous Dynamical
    Systems 45 (2025) 821–846.
das_tickbox: '1'
date_created: 2026-06-19T08:20:28Z
date_published: 2025-03-01T00:00:00Z
date_updated: 2026-06-30T07:34:20Z
day: '01'
ddc:
- '500'
doi: 10.3934/dcds.2024114
extern: '1'
external_id:
  arxiv:
  - '2404.02366'
intvolume: '        45'
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2404.02366
mathsc:
- 37J70
- 37K10
- 37K60
- 35Q53
- 35Q55
month: '03'
oa: 1
oa_version: Preprint
page: 821-846
publication: Discrete and Continuous Dynamical Systems
publication_identifier:
  eissn:
  - 1553-5231
  issn:
  - 1078-0947
publication_status: published
publisher: American Institute of Mathematical Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: The modified Korteweg–de Vries limit of the Ablowitz–Ladik system
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 45
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '22083'
abstract:
- lang: eng
  text: We prove global well-posedness for the cubic nonlinear Schrödinger equation
    with nonlinearity concentrated on a homogeneous Poisson process.
article_number: '095020'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Benjamin
  full_name: Harrop-Griffiths, Benjamin
  last_name: Harrop-Griffiths
- first_name: Rowan
  full_name: Killip, Rowan
  last_name: Killip
- first_name: Monica
  full_name: Visan, Monica
  id: 056daca0-b8d1-11f0-964f-f91054abf8ca
  last_name: Visan
citation:
  ama: Harrop-Griffiths B, Killip R, Vişan M. The nonlinear Schrödinger equation with
    sprinkled nonlinearity. <i>Nonlinearity</i>. 2025;38(9). doi:<a href="https://doi.org/10.1088/1361-6544/ae022e">10.1088/1361-6544/ae022e</a>
  apa: Harrop-Griffiths, B., Killip, R., &#38; Vişan, M. (2025). The nonlinear Schrödinger
    equation with sprinkled nonlinearity. <i>Nonlinearity</i>. IOP Publishing. <a
    href="https://doi.org/10.1088/1361-6544/ae022e">https://doi.org/10.1088/1361-6544/ae022e</a>
  chicago: Harrop-Griffiths, Benjamin, Rowan Killip, and Monica Vişan. “The Nonlinear
    Schrödinger Equation with Sprinkled Nonlinearity.” <i>Nonlinearity</i>. IOP Publishing,
    2025. <a href="https://doi.org/10.1088/1361-6544/ae022e">https://doi.org/10.1088/1361-6544/ae022e</a>.
  ieee: B. Harrop-Griffiths, R. Killip, and M. Vişan, “The nonlinear Schrödinger equation
    with sprinkled nonlinearity,” <i>Nonlinearity</i>, vol. 38, no. 9. IOP Publishing,
    2025.
  ista: Harrop-Griffiths B, Killip R, Vişan M. 2025. The nonlinear Schrödinger equation
    with sprinkled nonlinearity. Nonlinearity. 38(9), 095020.
  mla: Harrop-Griffiths, Benjamin, et al. “The Nonlinear Schrödinger Equation with
    Sprinkled Nonlinearity.” <i>Nonlinearity</i>, vol. 38, no. 9, 095020, IOP Publishing,
    2025, doi:<a href="https://doi.org/10.1088/1361-6544/ae022e">10.1088/1361-6544/ae022e</a>.
  short: B. Harrop-Griffiths, R. Killip, M. Vişan, Nonlinearity 38 (2025).
das_tickbox: '1'
date_created: 2026-06-19T08:27:54Z
date_published: 2025-09-15T00:00:00Z
date_updated: 2026-07-01T07:17:44Z
day: '15'
doi: 10.1088/1361-6544/ae022e
extern: '1'
external_id:
  arxiv:
  - '2405.01246'
intvolume: '        38'
issue: '9'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2405.01246
month: '09'
oa: 1
oa_version: Preprint
publication: Nonlinearity
publication_identifier:
  eissn:
  - 1361-6544
  issn:
  - 0951-7715
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: The nonlinear Schrödinger equation with sprinkled nonlinearity
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 38
year: '2025'
...
---
OA_place: publisher
OA_type: gold
_id: '22120'
article_number: EGU25-17446
article_processing_charge: No
author:
- first_name: José M
  full_name: Muñoz Hermosilla, José M
  id: e1037a6d-646e-11ef-b402-e0ed9ab0901e
  last_name: Muñoz Hermosilla
  orcid: 0000-0002-1990-8508
- first_name: Evan
  full_name: Miles, Evan
  last_name: Miles
- first_name: Michael
  full_name: McCarthy, Michael
  id: 22a2674a-61ce-11ee-94b5-d18813baf16f
  last_name: McCarthy
- first_name: Florian
  full_name: Hardmeier, Florian
  last_name: Hardmeier
- first_name: Juan Vicente
  full_name: Melo Velasco, Juan Vicente
  id: 2611dec0-b9c6-11ed-9bea-a81c2b17a549
  last_name: Melo Velasco
- first_name: Guillaume
  full_name: Jouvet, Guillaume
  last_name: Jouvet
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
  orcid: 0000-0002-5554-8087
citation:
  ama: 'Muñoz Hermosilla JM, Miles E, McCarthy M, et al. Towards reconstructing debris
    supply to reproduce the historic changes in debris extent at a Swiss glacier.
    In: <i>EGU General Assembly 2025</i>. European Geosciences Union; 2025. doi:<a
    href="https://doi.org/10.5194/egusphere-egu25-17446">10.5194/egusphere-egu25-17446</a>'
  apa: 'Muñoz Hermosilla, J. M., Miles, E., McCarthy, M., Hardmeier, F., Melo Velasco,
    J. V., Jouvet, G., &#38; Pellicciotti, F. (2025). Towards reconstructing debris
    supply to reproduce the historic changes in debris extent at a Swiss glacier.
    In <i>EGU General Assembly 2025</i>. Vienna, Austria &#38; Virtual: European Geosciences
    Union. <a href="https://doi.org/10.5194/egusphere-egu25-17446">https://doi.org/10.5194/egusphere-egu25-17446</a>'
  chicago: Muñoz Hermosilla, José M, Evan Miles, Michael McCarthy, Florian Hardmeier,
    Juan Vicente Melo Velasco, Guillaume Jouvet, and Francesca Pellicciotti. “Towards
    Reconstructing Debris Supply to Reproduce the Historic Changes in Debris Extent
    at a Swiss Glacier.” In <i>EGU General Assembly 2025</i>. European Geosciences
    Union, 2025. <a href="https://doi.org/10.5194/egusphere-egu25-17446">https://doi.org/10.5194/egusphere-egu25-17446</a>.
  ieee: J. M. Muñoz Hermosilla <i>et al.</i>, “Towards reconstructing debris supply
    to reproduce the historic changes in debris extent at a Swiss glacier,” in <i>EGU
    General Assembly 2025</i>, Vienna, Austria &#38; Virtual, 2025.
  ista: Muñoz Hermosilla JM, Miles E, McCarthy M, Hardmeier F, Melo Velasco JV, Jouvet
    G, Pellicciotti F. 2025. Towards reconstructing debris supply to reproduce the
    historic changes in debris extent at a Swiss glacier. EGU General Assembly 2025.
    EGU General Assembly, EGU25-17446.
  mla: Muñoz Hermosilla, José M., et al. “Towards Reconstructing Debris Supply to
    Reproduce the Historic Changes in Debris Extent at a Swiss Glacier.” <i>EGU General
    Assembly 2025</i>, EGU25-17446, European Geosciences Union, 2025, doi:<a href="https://doi.org/10.5194/egusphere-egu25-17446">10.5194/egusphere-egu25-17446</a>.
  short: J.M. Muñoz Hermosilla, E. Miles, M. McCarthy, F. Hardmeier, J.V. Melo Velasco,
    G. Jouvet, F. Pellicciotti, in:, EGU General Assembly 2025, European Geosciences
    Union, 2025.
conference:
  end_date: 2025-05-02
  location: Vienna, Austria & Virtual
  name: EGU General Assembly
  start_date: 2025-04-27
date_created: 2026-06-22T12:17:47Z
date_published: 2025-05-14T00:00:00Z
date_updated: 2026-07-02T06:41:43Z
day: '14'
ddc:
- '550'
department:
- _id: FrPe
- _id: GradSch
doi: 10.5194/egusphere-egu25-17446
has_accepted_license: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5194/egusphere-egu25-17446
month: '05'
oa: 1
oa_version: Published Version
publication: EGU General Assembly 2025
publication_status: published
publisher: European Geosciences Union
status: public
title: Towards reconstructing debris supply to reproduce the historic changes in debris
  extent at a Swiss glacier
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference_abstract
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: diamond
PlanS_conform: '1'
_id: '21263'
abstract:
- lang: eng
  text: Two landmark results in combinatorial random matrix theory, due to Komlós
    and Costello–Tao–Vu, show that discrete random matrices and symmetric discrete
    random matrices are typically nonsingular. In particular, in the language of graph
    theory, when p is a fixed constant, the biadjacency matrix of a random Erdős–Rényi
    bipartite graph G(n,n,p) and the adjacency matrix of an Erdős–Rényi random graph
    G(n,p) are both nonsingular with high probability. However, very sparse random
    graphs (i.e., where p is allowed to decay rapidly with n) are typically singular,
    due to the presence of “local” dependencies such as isolated vertices and pairs
    of degree-1 vertices with the same neighbour. In this paper, we give a combinatorial
    description of the rank of a sparse random graph G(n,n,c/n) or G(n,c/n) in terms
    of such local dependencies, for all constants c=e (and we present some evidence
    that the situation is very different for c=e). This gives an essentially complete
    answer to a question raised by Vu (2014). As applications of our main theorem
    and its proof, we also determine the asymptotic singularity probability of the
    2-core of a sparse random graph, we show that the rank of a sparse random graph
    is extremely well approximated by its matching number, and we deduce a central
    limit theorem for the rank of G(n,c/n).
acknowledgement: "We would like to thank Noga Alon for suggesting that our main result
  gives\r\na linear-time algorithm for computing the rank. We also thank the referees
  for a number of thoughtful comments and suggestions. Glasgow was supported by NSF
  graduate research fellowship program award DGE1656518. Kwan was supported by ERC
  Starting Grant “RANDSTRUCT” No. 101076777. Sah and Sawhney were supported by NSF
  Graduate Research Fellowship Program DGE-1745302.\r\n"
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Margalit
  full_name: Glasgow, Margalit
  last_name: Glasgow
- first_name: Matthew Alan
  full_name: Kwan, Matthew Alan
  id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3
  last_name: Kwan
  orcid: 0000-0002-4003-7567
- first_name: Ashwin
  full_name: Sah, Ashwin
  last_name: Sah
- first_name: Mehtaab
  full_name: Sawhney, Mehtaab
  last_name: Sawhney
citation:
  ama: Glasgow M, Kwan MA, Sah A, Sawhney M. The exact rank of sparse random graphs.
    <i>Journal of the European Mathematical Society</i>. 2025. doi:<a href="https://doi.org/10.4171/jems/1692">10.4171/jems/1692</a>
  apa: Glasgow, M., Kwan, M. A., Sah, A., &#38; Sawhney, M. (2025). The exact rank
    of sparse random graphs. <i>Journal of the European Mathematical Society</i>.
    EMS Press. <a href="https://doi.org/10.4171/jems/1692">https://doi.org/10.4171/jems/1692</a>
  chicago: Glasgow, Margalit, Matthew Alan Kwan, Ashwin Sah, and Mehtaab Sawhney.
    “The Exact Rank of Sparse Random Graphs.” <i>Journal of the European Mathematical
    Society</i>. EMS Press, 2025. <a href="https://doi.org/10.4171/jems/1692">https://doi.org/10.4171/jems/1692</a>.
  ieee: M. Glasgow, M. A. Kwan, A. Sah, and M. Sawhney, “The exact rank of sparse
    random graphs,” <i>Journal of the European Mathematical Society</i>. EMS Press,
    2025.
  ista: Glasgow M, Kwan MA, Sah A, Sawhney M. 2025. The exact rank of sparse random
    graphs. Journal of the European Mathematical Society.
  mla: Glasgow, Margalit, et al. “The Exact Rank of Sparse Random Graphs.” <i>Journal
    of the European Mathematical Society</i>, EMS Press, 2025, doi:<a href="https://doi.org/10.4171/jems/1692">10.4171/jems/1692</a>.
  short: M. Glasgow, M.A. Kwan, A. Sah, M. Sawhney, Journal of the European Mathematical
    Society (2025).
corr_author: '1'
das_tickbox: '1'
date_created: 2026-02-17T07:41:59Z
date_published: 2025-09-02T00:00:00Z
date_updated: 2026-07-06T11:51:31Z
day: '02'
ddc:
- '510'
department:
- _id: MaKw
doi: 10.4171/jems/1692
external_id:
  arxiv:
  - '2303.05435'
has_accepted_license: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.4171/JEMS/1692
month: '09'
oa: 1
oa_version: Published Version
project:
- _id: bd95085b-d553-11ed-ba76-e55d3349be45
  grant_number: '101076777'
  name: Randomness and structure in combinatorics
publication: Journal of the European Mathematical Society
publication_identifier:
  eissn:
  - 1435-9863
  issn:
  - 1435-9855
publication_status: epub_ahead
publisher: EMS Press
quality_controlled: '1'
status: public
title: The exact rank of sparse random graphs
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
OA_place: repository
_id: '21427'
abstract:
- lang: eng
  text: While tumor malignancy has been extensively studied under the prism of genetic
    and epigenetic heterogeneity, tumor cell states also critically depend on reciprocal
    interactions with the microenvironment. This raises the hitherto untested possibility
    that heterogeneity of the untransformed tumor stroma can actively fuel malignant
    progression. As biological heterogeneity is inherently difficult to control, we
    adopted a reductionist approach and let tumor cells invade micro-engineered environments
    harboring obstacles with precision-controlled geometry. We find that not only
    the presence of obstacles, but more surprisingly their spatial disorder, causes
    a drastic shift from a collective to a single-cell mode of invasion – comparable
    in strength to cadherin loss. Combining live-imaging and perturbation experiments
    with minimal biophysical modeling, we demonstrate that cell detachments result
    both from local geometrical constraints and a global integration of spatial disorder
    over time. We show that different types of microenvironments map onto different
    universality classes of invasion dynamics - homogeneous substrates follow Kardar–Parisi–Zhang
    (KPZ) scaling, while disordered ones exhibit exponents consistent with KPZ with
    quenched disorder (KPZq). Our findings highlight generic physical principles for
    how the mode of cancer cell invasion depends on environmental heterogeneity, with
    potential implications to understand tumor evolution in vivo.
acknowledgement: "European Research Council, https://ror.org/0472cxd90, 101071793\r\nAustrian
  Academy of Sciences, 26360"
article_processing_charge: No
author:
- first_name: Zuzana
  full_name: Dunajova, Zuzana
  id: 4B39F286-F248-11E8-B48F-1D18A9856A87
  last_name: Dunajova
- first_name: Saren
  full_name: Tasciyan, Saren
  id: 4323B49C-F248-11E8-B48F-1D18A9856A87
  last_name: Tasciyan
  orcid: 0000-0003-1671-393X
- first_name: Juraj
  full_name: Majek, Juraj
  id: 3e6d9473-f38e-11ec-8ae0-c4e05a8aa9e1
  last_name: Majek
- first_name: Jack
  full_name: Merrin, Jack
  id: 4515C308-F248-11E8-B48F-1D18A9856A87
  last_name: Merrin
  orcid: 0000-0001-5145-4609
- first_name: Erik
  full_name: Sahai, Erik
  last_name: Sahai
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-6620-9179
- first_name: Edouard B
  full_name: Hannezo, Edouard B
  id: 3A9DB764-F248-11E8-B48F-1D18A9856A87
  last_name: Hannezo
  orcid: 0000-0001-6005-1561
citation:
  ama: Dunajova Z, Tasciyan S, Majek J, et al. Substrate heterogeneity promotes cancer
    cell dissemination through interface roughening. <i>bioRxiv</i>. doi:<a href="https://doi.org/10.1101/2025.05.20.655037">10.1101/2025.05.20.655037</a>
  apa: Dunajova, Z., Tasciyan, S., Majek, J., Merrin, J., Sahai, E., Sixt, M. K.,
    &#38; Hannezo, E. B. (n.d.). Substrate heterogeneity promotes cancer cell dissemination
    through interface roughening. <i>bioRxiv</i>. <a href="https://doi.org/10.1101/2025.05.20.655037">https://doi.org/10.1101/2025.05.20.655037</a>
  chicago: Dunajova, Zuzana, Saren Tasciyan, Juraj Majek, Jack Merrin, Erik Sahai,
    Michael K Sixt, and Edouard B Hannezo. “Substrate Heterogeneity Promotes Cancer
    Cell Dissemination through Interface Roughening.” <i>BioRxiv</i>, n.d. <a href="https://doi.org/10.1101/2025.05.20.655037">https://doi.org/10.1101/2025.05.20.655037</a>.
  ieee: Z. Dunajova <i>et al.</i>, “Substrate heterogeneity promotes cancer cell dissemination
    through interface roughening,” <i>bioRxiv</i>. .
  ista: Dunajova Z, Tasciyan S, Majek J, Merrin J, Sahai E, Sixt MK, Hannezo EB. Substrate
    heterogeneity promotes cancer cell dissemination through interface roughening.
    bioRxiv, <a href="https://doi.org/10.1101/2025.05.20.655037">10.1101/2025.05.20.655037</a>.
  mla: Dunajova, Zuzana, et al. “Substrate Heterogeneity Promotes Cancer Cell Dissemination
    through Interface Roughening.” <i>BioRxiv</i>, doi:<a href="https://doi.org/10.1101/2025.05.20.655037">10.1101/2025.05.20.655037</a>.
  short: Z. Dunajova, S. Tasciyan, J. Majek, J. Merrin, E. Sahai, M.K. Sixt, E.B.
    Hannezo, BioRxiv (n.d.).
corr_author: '1'
das_tickbox: '1'
date_created: 2026-03-11T08:40:06Z
date_published: 2025-09-25T00:00:00Z
date_updated: 2026-07-06T12:38:17Z
day: '25'
ddc:
- '539'
- '570'
department:
- _id: GradSch
- _id: EdHa
- _id: MiSi
- _id: NanoFab
- _id: AnSa
doi: 10.1101/2025.05.20.655037
has_accepted_license: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1101/2025.05.20.655037
month: '09'
oa: 1
oa_version: Preprint
project:
- _id: bd91e723-d553-11ed-ba76-fe7eeb2185fd
  grant_number: '101071793'
  name: 'Pushing from within: Control of cell shape, integrity and motility by cytoskeletal
    pushing forces'
- _id: 34d75525-11ca-11ed-8bc3-89b6307fee9d
  grant_number: '26360'
  name: Motile active matter models of migrating cells and chiral filaments
publication: bioRxiv
publication_status: draft
related_material:
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status: public
title: Substrate heterogeneity promotes cancer cell dissemination through interface
  roughening
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '20656'
abstract:
- lang: eng
  text: Phytohormone auxin and its directional transport mediate much of the remarkably
    plastic development of higher plants. Positive feedback between auxin signaling
    and transport is a prerequisite for (1) self-organizing processes, including vascular
    tissue formation, and (2) directional growth responses such as gravitropism. Here,
    we identify a mechanism by which auxin signaling directly targets PIN auxin transporters.
    Via the cell-surface AUXIN-BINDING PROTEIN1 (ABP1)-TRANSMEMBRANE KINASE 1 (TMK1)
    receptor module, auxin rapidly induces phosphorylation and thus stabilization
    of PIN2. Following gravistimulation, initial auxin asymmetry activates autophosphorylation
    of the TMK1 kinase. This induces TMK1 interaction with and phosphorylation of
    PIN2, stabilizing PIN2 at the lower root side, thus reinforcing asymmetric auxin
    flow for root bending. Upstream of TMK1 in this regulation, ABP1 acts redundantly
    with the root-expressed ABP1-LIKE 3 (ABL3) auxin receptor. Such positive feedback
    between cell-surface auxin signaling and PIN-mediated polar auxin transport is
    fundamental for robust root gravitropism and presumably for other self-organizing
    developmental phenomena.
acknowledged_ssus:
- _id: Bio
- _id: LifeSc
acknowledgement: We gratefully acknowledge Tongda Xu for experimental, material, and
  conceptual support. We thank William Gray for providing material, Nataliia Gnyliukh
  and Ema Cervenova for help with manuscript preparation, and Julia Schmid for help
  with cloning. We thank Dolf Weijers, Mark Roosjen, and Andre Kuhn for discussions
  and support with phospho-proteomic analyses. We thank the Bioimaging and Life Science
  facilities at the Institute of Science and Technology Austria (ISTA) for their excellent
  service and assistance. The research leading to these results has received funding
  from the European Union (ERC, CYNIPS, 101142681) and Austrian Science Fund (FWF;
  I 6123-B) to J.F., and Y.J. was funded by ERC no. 3363360-APPL under FP/2007-2013.
  L.R. was supported by the FP7-PEOPLE-2011-COFUND ISTFELLOW program (IC1023FELL01)
  and the European Molecular Biology Organization (EMBO) long-term postdoctoral fellowship
  (ALTF 985-2016). S.T. was supported by the National Natural Science Foundation of
  China (32321001, 32570366). The work of J.H. was supported by the project JG_2024_003
  implemented within the Palacký University Young Researcher Grant.
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Lesia
  full_name: Rodriguez Solovey, Lesia
  id: 3922B506-F248-11E8-B48F-1D18A9856A87
  last_name: Rodriguez Solovey
  orcid: 0000-0002-7244-7237
- first_name: Lukas
  full_name: Fiedler, Lukas
  id: 7c417475-8972-11ed-ae7b-8b674ca26986
  last_name: Fiedler
- first_name: Minxia
  full_name: Zou, Minxia
  id: 5c243f41-03f3-11ec-841c-96faf48a7ef9
  last_name: Zou
- first_name: Caterina
  full_name: Giannini, Caterina
  id: e3fdddd5-f6e0-11ea-865d-ca99ee6367f4
  last_name: Giannini
- first_name: Aline
  full_name: Monzer, Aline
  id: 2DB5D88C-D7B3-11E9-B8FD-7907E6697425
  last_name: Monzer
- first_name: Dmitrii
  full_name: Vladimirtsev, Dmitrii
  id: 60466724-5355-11ee-ae5a-fa55e8f99c3d
  last_name: Vladimirtsev
- first_name: Marek
  full_name: Randuch, Marek
  id: 6ac4636d-15b2-11ec-abd3-fb8df79972ae
  last_name: Randuch
- first_name: Yongfan
  full_name: Yu, Yongfan
  last_name: Yu
- first_name: Zuzana
  full_name: Gelová, Zuzana
  id: 0AE74790-0E0B-11E9-ABC7-1ACFE5697425
  last_name: Gelová
  orcid: 0000-0003-4783-1752
- first_name: Inge
  full_name: Verstraeten, Inge
  id: 362BF7FE-F248-11E8-B48F-1D18A9856A87
  last_name: Verstraeten
  orcid: 0000-0001-7241-2328
- first_name: Jakub
  full_name: Hajny, Jakub
  id: 4800CC20-F248-11E8-B48F-1D18A9856A87
  last_name: Hajny
  orcid: 0000-0003-2140-7195
- first_name: Meng
  full_name: Chen, Meng
  last_name: Chen
- first_name: Shutang
  full_name: Tan, Shutang
  id: 2DE75584-F248-11E8-B48F-1D18A9856A87
  last_name: Tan
  orcid: 0000-0002-0471-8285
- first_name: Lukas
  full_name: Hörmayer, Lukas
  id: 2EEE7A2A-F248-11E8-B48F-1D18A9856A87
  last_name: Hörmayer
  orcid: 0000-0001-8295-2926
- first_name: Lanxin
  full_name: Li, Lanxin
  id: 367EF8FA-F248-11E8-B48F-1D18A9856A87
  last_name: Li
  orcid: 0000-0002-5607-272X
- first_name: Maria Mar
  full_name: Marques-Bueno, Maria Mar
  last_name: Marques-Bueno
- first_name: Zainab
  full_name: Quddoos, Zainab
  id: 32ff3c64-04a0-11f0-a50f-d0c45bfac466
  last_name: Quddoos
- first_name: Gergely
  full_name: Molnar, Gergely
  id: 34F1AF46-F248-11E8-B48F-1D18A9856A87
  last_name: Molnar
- first_name: Ivan
  full_name: Kulich, Ivan
  id: 57a1567c-8314-11eb-9063-c9ddc3451a54
  last_name: Kulich
- first_name: Yvon
  full_name: Jaillais, Yvon
  last_name: Jaillais
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Rodriguez Solovey L, Fiedler L, Zou M, et al. ABP1/ABL3-TMK1 cell-surface auxin
    signaling targets PIN2-mediated auxin fluxes for root gravitropism. <i>Cell</i>.
    2025;188(22):6138-6150.e17. doi:<a href="https://doi.org/10.1016/j.cell.2025.08.026">10.1016/j.cell.2025.08.026</a>
  apa: Rodriguez Solovey, L., Fiedler, L., Zou, M., Giannini, C., Monzer, A., Vladimirtsev,
    D., … Friml, J. (2025). ABP1/ABL3-TMK1 cell-surface auxin signaling targets PIN2-mediated
    auxin fluxes for root gravitropism. <i>Cell</i>. Elsevier. <a href="https://doi.org/10.1016/j.cell.2025.08.026">https://doi.org/10.1016/j.cell.2025.08.026</a>
  chicago: Rodriguez Solovey, Lesia, Lukas Fiedler, Minxia Zou, Caterina Giannini,
    Aline Monzer, Dmitrii Vladimirtsev, Marek Randuch, et al. “ABP1/ABL3-TMK1 Cell-Surface
    Auxin Signaling Targets PIN2-Mediated Auxin Fluxes for Root Gravitropism.” <i>Cell</i>.
    Elsevier, 2025. <a href="https://doi.org/10.1016/j.cell.2025.08.026">https://doi.org/10.1016/j.cell.2025.08.026</a>.
  ieee: L. Rodriguez Solovey <i>et al.</i>, “ABP1/ABL3-TMK1 cell-surface auxin signaling
    targets PIN2-mediated auxin fluxes for root gravitropism,” <i>Cell</i>, vol. 188,
    no. 22. Elsevier, p. 6138–6150.e17, 2025.
  ista: Rodriguez Solovey L, Fiedler L, Zou M, Giannini C, Monzer A, Vladimirtsev
    D, Randuch M, Yu Y, Gelová Z, Verstraeten I, Hajny J, Chen M, Tan S, Hörmayer
    L, Li L, Marques-Bueno MM, Quddoos Z, Molnar G, Kulich I, Jaillais Y, Friml J.
    2025. ABP1/ABL3-TMK1 cell-surface auxin signaling targets PIN2-mediated auxin
    fluxes for root gravitropism. Cell. 188(22), 6138–6150.e17.
  mla: Rodriguez Solovey, Lesia, et al. “ABP1/ABL3-TMK1 Cell-Surface Auxin Signaling
    Targets PIN2-Mediated Auxin Fluxes for Root Gravitropism.” <i>Cell</i>, vol. 188,
    no. 22, Elsevier, 2025, p. 6138–6150.e17, doi:<a href="https://doi.org/10.1016/j.cell.2025.08.026">10.1016/j.cell.2025.08.026</a>.
  short: L. Rodriguez Solovey, L. Fiedler, M. Zou, C. Giannini, A. Monzer, D. Vladimirtsev,
    M. Randuch, Y. Yu, Z. Gelová, I. Verstraeten, J. Hajny, M. Chen, S. Tan, L. Hörmayer,
    L. Li, M.M. Marques-Bueno, Z. Quddoos, G. Molnar, I. Kulich, Y. Jaillais, J. Friml,
    Cell 188 (2025) 6138–6150.e17.
corr_author: '1'
date_created: 2025-11-19T09:44:31Z
date_published: 2025-10-30T00:00:00Z
date_updated: 2026-07-06T12:51:13Z
day: '30'
ddc:
- '580'
department:
- _id: JiFr
- _id: XiFe
doi: 10.1016/j.cell.2025.08.026
ec_funded: 1
external_id:
  isi:
  - '001616077900005'
  pmid:
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isi: 1
issue: '22'
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
page: 6138-6150.e17
pmid: 1
project:
- _id: 8f347782-16d5-11f0-9cad-8c19706ee739
  grant_number: '101142681'
  name: Cyclic nucleotides as second messengers in plants
- _id: bd76d395-d553-11ed-ba76-f678c14f9033
  grant_number: I06123
  name: Peptide receptors for auxin canalization in Arabidopsis
- _id: 26060676-B435-11E9-9278-68D0E5697425
  grant_number: ALTF 985-2016
  name: Cell surface receptor complexes for auxin signaling in plants
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
publication: Cell
publication_identifier:
  issn:
  - 0092-8674
publication_status: published
publisher: Elsevier
quality_controlled: '1'
related_material:
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status: public
title: ABP1/ABL3-TMK1 cell-surface auxin signaling targets PIN2-mediated auxin fluxes
  for root gravitropism
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 188
year: '2025'
...
---
OA_place: publisher
_id: '20364'
acknowledged_ssus:
- _id: LifeSc
- _id: Bio
acknowledgement: "Plant Facility,\r\nProtein Service Facility"
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Caterina
  full_name: Giannini, Caterina
  id: e3fdddd5-f6e0-11ea-865d-ca99ee6367f4
  last_name: Giannini
citation:
  ama: Giannini C. Nuclear and cell surface auxin signaling in A. thaliana developmental
    transitions. 2025. doi:<a href="https://doi.org/10.15479/AT-ISTA-20364">10.15479/AT-ISTA-20364</a>
  apa: Giannini, C. (2025). <i>Nuclear and cell surface auxin signaling in A. thaliana
    developmental transitions</i>. Institute of Science and Technology Austria. <a
    href="https://doi.org/10.15479/AT-ISTA-20364">https://doi.org/10.15479/AT-ISTA-20364</a>
  chicago: Giannini, Caterina. “Nuclear and Cell Surface Auxin Signaling in A. Thaliana
    Developmental Transitions.” Institute of Science and Technology Austria, 2025.
    <a href="https://doi.org/10.15479/AT-ISTA-20364">https://doi.org/10.15479/AT-ISTA-20364</a>.
  ieee: C. Giannini, “Nuclear and cell surface auxin signaling in A. thaliana developmental
    transitions,” Institute of Science and Technology Austria, 2025.
  ista: Giannini C. 2025. Nuclear and cell surface auxin signaling in A. thaliana
    developmental transitions. Institute of Science and Technology Austria.
  mla: Giannini, Caterina. <i>Nuclear and Cell Surface Auxin Signaling in A. Thaliana
    Developmental Transitions</i>. Institute of Science and Technology Austria, 2025,
    doi:<a href="https://doi.org/10.15479/AT-ISTA-20364">10.15479/AT-ISTA-20364</a>.
  short: C. Giannini, Nuclear and Cell Surface Auxin Signaling in A. Thaliana Developmental
    Transitions, Institute of Science and Technology Austria, 2025.
corr_author: '1'
date_created: 2025-09-19T12:23:38Z
date_published: 2025-09-19T00:00:00Z
date_updated: 2026-07-06T12:51:13Z
day: '19'
ddc:
- '580'
degree_awarded: PhD
department:
- _id: GradSch
- _id: JiFr
- _id: MaLo
doi: 10.15479/AT-ISTA-20364
file:
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has_accepted_license: '1'
keyword:
- Auxin Signaling
- Plant Development
language:
- iso: eng
month: '09'
oa_version: Published Version
page: '151'
publication_identifier:
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
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status: public
supervisor:
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
title: Nuclear and cell surface auxin signaling in A. thaliana developmental transitions
type: dissertation
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2025'
...
