---
_id: '17325'
abstract:
- lang: eng
  text: Bacterial ion fluxes are involved in the generation of energy, transport,
    and motility. As such, bacterial electrophysiology is fundamentally important
    for the bacterial life cycle, but it is often neglected and consequently, by and
    large, not understood. Arguably, the two main reasons for this are the complexity
    of measuring relevant variables in small cells with a cell envelope that contains
    the cell wall and the fact that, in a unicellular organism, relevant variables
    become intertwined in a nontrivial manner. To help give bacterial electrophysiology
    studies a firm footing, in this review, we go back to basics. We look first at
    the biophysics of bacterial membrane potential, and then at the approaches and
    models developed mostly for the study of neurons and eukaryotic mitochondria.
    We discuss their applicability to bacterial cells. Finally, we connect bacterial
    membrane potential with other relevant (electro)physiological variables and summarize
    methods that can be used to both measure and influence bacterial electrophysiology.
acknowledgement: We would like to thank all members of the Pilizota lab, as well as
  Calin Guet, Orkun Soyer, Munehiro Asally, Peter Swain, and in particular Matt Scott
  and Ariel Amir, for their support, comments, and useful discussions. T.P. and W.-C.L.
  were supported by the Leverhulme Trust, grant RPG-2019-187, and T.P. is supported
  by EPSRC Fellowship EP/V03264X/1. E.K. was supported by a European Molecular Biology
  Organization Long-Term Postdoctoral Fellowship, ALTF 44-2021.
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Wei Chang
  full_name: Lo, Wei Chang
  last_name: Lo
- first_name: Ekaterina
  full_name: Krasnopeeva, Ekaterina
  id: 1F1EE44A-BF83-11EA-B3C1-BB9CC619BF3A
  last_name: Krasnopeeva
- first_name: Teuta
  full_name: Pilizota, Teuta
  last_name: Pilizota
citation:
  ama: Lo WC, Krasnopeeva E, Pilizota T. Bacterial Electrophysiology. <i>Annual Review
    of Biophysics</i>. 2024;53:487-510. doi:<a href="https://doi.org/10.1146/annurev-biophys-030822-032215">10.1146/annurev-biophys-030822-032215</a>
  apa: Lo, W. C., Krasnopeeva, E., &#38; Pilizota, T. (2024). Bacterial Electrophysiology.
    <i>Annual Review of Biophysics</i>. Annual Reviews. <a href="https://doi.org/10.1146/annurev-biophys-030822-032215">https://doi.org/10.1146/annurev-biophys-030822-032215</a>
  chicago: Lo, Wei Chang, Ekaterina Krasnopeeva, and Teuta Pilizota. “Bacterial Electrophysiology.”
    <i>Annual Review of Biophysics</i>. Annual Reviews, 2024. <a href="https://doi.org/10.1146/annurev-biophys-030822-032215">https://doi.org/10.1146/annurev-biophys-030822-032215</a>.
  ieee: W. C. Lo, E. Krasnopeeva, and T. Pilizota, “Bacterial Electrophysiology,”
    <i>Annual Review of Biophysics</i>, vol. 53. Annual Reviews, pp. 487–510, 2024.
  ista: Lo WC, Krasnopeeva E, Pilizota T. 2024. Bacterial Electrophysiology. Annual
    Review of Biophysics. 53, 487–510.
  mla: Lo, Wei Chang, et al. “Bacterial Electrophysiology.” <i>Annual Review of Biophysics</i>,
    vol. 53, Annual Reviews, 2024, pp. 487–510, doi:<a href="https://doi.org/10.1146/annurev-biophys-030822-032215">10.1146/annurev-biophys-030822-032215</a>.
  short: W.C. Lo, E. Krasnopeeva, T. Pilizota, Annual Review of Biophysics 53 (2024)
    487–510.
date_created: 2024-07-28T22:01:09Z
date_published: 2024-07-01T00:00:00Z
date_updated: 2025-09-08T08:34:43Z
day: '01'
ddc:
- '570'
department:
- _id: CaGu
doi: 10.1146/annurev-biophys-030822-032215
external_id:
  isi:
  - '001278237500021'
  pmid:
  - '38382113'
file:
- access_level: open_access
  checksum: e0505553b3cee624fa865f0cc5a99ecc
  content_type: application/pdf
  creator: dernst
  date_created: 2024-07-29T10:56:01Z
  date_updated: 2024-07-29T10:56:01Z
  file_id: '17339'
  file_name: 2024_AnnualReviewBiophys_Lo.pdf
  file_size: 1276645
  relation: main_file
  success: 1
file_date_updated: 2024-07-29T10:56:01Z
has_accepted_license: '1'
intvolume: '        53'
isi: 1
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 487-510
pmid: 1
project:
- _id: eb872896-77a9-11ec-83b8-f59a38ec17f8
  grant_number: ALTF 44-2021
  name: 'Bacterial cytoplasm glass transition: passive physiological switch or active
    survival strategy'
publication: Annual Review of Biophysics
publication_identifier:
  eissn:
  - 1936-1238
  issn:
  - 1936-122X
publication_status: published
publisher: Annual Reviews
quality_controlled: '1'
scopus_import: '1'
status: public
title: Bacterial Electrophysiology
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 53
year: '2024'
...
---
DOAJ_listed: '1'
_id: '17326'
abstract:
- lang: eng
  text: Magnetic fields in the stellar interiors are key candidates to explain observed
    core rotation rates inside solar-like stars along their evolution. Recently, asteroseismic
    estimates of radial magnetic field amplitudes near the hydrogen-burning shell
    (H-shell) inside about 24 red giants (RGs) have been obtained by measuring frequency
    splittings from their power spectra. Using general Lorentz-stress (magnetic) kernels,
    we investigated the potential for detectability of near-surface magnetism in a
    1.3 M⊙ star of supersolar metallicity as it evolves from a mid subgiant to a late
    subgiant into an RG. Based on these sensitivity kernels, we decompose an RG into
    three zones—deep core, H-shell, and near-surface. The subgiants instead required
    decomposition into an inner core, an outer core, and a near-surface layer. Additionally,
    we find that for a low-frequency g-dominated dipolar mode in the presence of a
    typical stable magnetic field, ∼25% of the frequency shift comes from the H-shell
    and the remaining from deeper layers. The ratio of the subsurface tangential field
    to the radial field in the H-burning shell decides if subsurface fields may be
    potentially detectable. For p-dominated dipole modes close to vmax, this ratio
    is around two orders of magnitude smaller in subgiant phases than the corresponding
    RG. Further, with the availability of magnetic kernels, we propose lower limits
    of field strengths in crucial layers in our stellar model during its evolutionary
    phases. The theoretical prescription outlined here provides the first formal way
    to devise inverse problems for stellar magnetism and can be seamlessly employed
    for slow rotators.
acknowledgement: "This project has received funding from the European Union's Horizon
  2020 research and innovation program under the Marie Skłodowska-Curie grant agreement
  No. 101034413. S.\r\nB.D. acknowledges Prof. Jeroen Tromp at Princeton University
  for supporting a part of this work. S.M.H., S.B., and S.P. acknowledge support from
  the Department of Atomic Energy,\r\nGovernment of India, under Project Identification
  No. RTI 4002. The authors would like to thank the reviewer(s) and data editor for
  their constructive comments and suggestions. The\r\ngeneration of the stellar models
  was done using the Modules for Experiments in Stellar Astrophysics (MESA Paxton
  et al. 2011, 2013, 2015, 2018, 2019; we have used MESA version\r\nr22.05.1 for RG
  and r23.05.1 for SG models, MESA-SDK version x86_64-linux-22.6.1). The eigenfrequencies
  and eigenfunctions for this model were calculated using the GYRE\r\n(Townsend &
  Teitler 2013) code. The code to calculate the kernels and the splittings has been
  written completely in Python 3.8.16."
article_number: '42'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Shatanik
  full_name: Bhattacharya, Shatanik
  last_name: Bhattacharya
- first_name: Srijan B
  full_name: Das, Srijan B
  id: 9ce7c423-dacf-11ed-8942-e09c6cb27149
  last_name: Das
  orcid: 0000-0003-0896-7972
- first_name: Lisa Annabelle
  full_name: Bugnet, Lisa Annabelle
  id: d9edb345-f866-11ec-9b37-d119b5234501
  last_name: Bugnet
  orcid: 0000-0003-0142-4000
- first_name: Subrata
  full_name: Panda, Subrata
  last_name: Panda
- first_name: Shravan M.
  full_name: Hanasoge, Shravan M.
  last_name: Hanasoge
citation:
  ama: Bhattacharya S, Das SB, Bugnet LA, Panda S, Hanasoge SM. Detectability of axisymmetric
    magnetic fields from the core to the surface of oscillating post-main-sequence
    stars. <i>Astrophysical Journal</i>. 2024;970(1). doi:<a href="https://doi.org/10.3847/1538-4357/ad4708">10.3847/1538-4357/ad4708</a>
  apa: Bhattacharya, S., Das, S. B., Bugnet, L. A., Panda, S., &#38; Hanasoge, S.
    M. (2024). Detectability of axisymmetric magnetic fields from the core to the
    surface of oscillating post-main-sequence stars. <i>Astrophysical Journal</i>.
    IOP Publishing. <a href="https://doi.org/10.3847/1538-4357/ad4708">https://doi.org/10.3847/1538-4357/ad4708</a>
  chicago: Bhattacharya, Shatanik, Srijan B Das, Lisa Annabelle Bugnet, Subrata Panda,
    and Shravan M. Hanasoge. “Detectability of Axisymmetric Magnetic Fields from the
    Core to the Surface of Oscillating Post-Main-Sequence Stars.” <i>Astrophysical
    Journal</i>. IOP Publishing, 2024. <a href="https://doi.org/10.3847/1538-4357/ad4708">https://doi.org/10.3847/1538-4357/ad4708</a>.
  ieee: S. Bhattacharya, S. B. Das, L. A. Bugnet, S. Panda, and S. M. Hanasoge, “Detectability
    of axisymmetric magnetic fields from the core to the surface of oscillating post-main-sequence
    stars,” <i>Astrophysical Journal</i>, vol. 970, no. 1. IOP Publishing, 2024.
  ista: Bhattacharya S, Das SB, Bugnet LA, Panda S, Hanasoge SM. 2024. Detectability
    of axisymmetric magnetic fields from the core to the surface of oscillating post-main-sequence
    stars. Astrophysical Journal. 970(1), 42.
  mla: Bhattacharya, Shatanik, et al. “Detectability of Axisymmetric Magnetic Fields
    from the Core to the Surface of Oscillating Post-Main-Sequence Stars.” <i>Astrophysical
    Journal</i>, vol. 970, no. 1, 42, IOP Publishing, 2024, doi:<a href="https://doi.org/10.3847/1538-4357/ad4708">10.3847/1538-4357/ad4708</a>.
  short: S. Bhattacharya, S.B. Das, L.A. Bugnet, S. Panda, S.M. Hanasoge, Astrophysical
    Journal 970 (2024).
date_created: 2024-07-28T22:01:09Z
date_published: 2024-07-15T00:00:00Z
date_updated: 2025-09-08T08:42:20Z
day: '15'
ddc:
- '520'
department:
- _id: LiBu
doi: 10.3847/1538-4357/ad4708
ec_funded: 1
external_id:
  arxiv:
  - '2404.17167'
  isi:
  - '001270972500001'
file:
- access_level: open_access
  checksum: acb42a87deecbc9228fbbe6a48a37ec6
  content_type: application/pdf
  creator: dernst
  date_created: 2024-07-29T11:02:48Z
  date_updated: 2024-07-29T11:02:48Z
  file_id: '17340'
  file_name: 2024_AstrophysicalJourn_Bhattacharya.pdf
  file_size: 3912290
  relation: main_file
  success: 1
file_date_updated: 2024-07-29T11:02:48Z
has_accepted_license: '1'
intvolume: '       970'
isi: 1
issue: '1'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: Astrophysical Journal
publication_identifier:
  eissn:
  - 1538-4357
  issn:
  - 0004-637X
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Detectability of axisymmetric magnetic fields from the core to the surface
  of oscillating post-main-sequence stars
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 970
year: '2024'
...
---
_id: '17327'
abstract:
- lang: eng
  text: Sequential decision-making in probabilistic environments is a fundamental
    problem with many applications in AI and economics. In this paper, we present
    an algorithm for synthesizing sequential decision-making agents that optimize
    statistical properties such as maximum and average response times. In the general
    setting of sequential decision-making, the environment is modeled as a random
    process that generates inputs. The agent responds to each input, aiming to maximize
    rewards and minimize costs within a specified time horizon. The corresponding
    synthesis problem is known to be PSPACE-hard. We consider the special case where
    the input distribution, reward, and cost depend on input-output statistics specified
    by counter automata. For such problems, this paper presents the first PTIME synthesis
    algorithms. We introduce the notion of statistical abstraction, which clusters
    statistically indistinguishable input-output sequences into equivalence classes.
    This abstraction allows for a dynamic programming algorithm whose complexity grows
    polynomially with the considered horizon, making the statistical case exponentially
    more efficient than the general case. We evaluate our algorithm on three different
    application scenarios of a client-server protocol, where multiple clients compete
    via bidding to gain access to the service offered by the server. The synthesized
    policies optimize profit while guaranteeing that none of the server’s clients
    is disproportionately starved of the service.
acknowledgement: "This work is partly supported by the European Research Council under
  Grant No.: ERC2020-AdG 101020093. It is also partially supported by the State Government
  of Styria, Austria –\r\nDepartment Zukunftsfonds Steiermark."
alternative_title:
- LIPIcs
article_number: '2'
article_processing_charge: Yes
author:
- first_name: Filip
  full_name: Cano, Filip
  last_name: Cano
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000-0002-2985-7724
- first_name: Bettina
  full_name: Könighofer, Bettina
  last_name: Könighofer
- first_name: Konstantin
  full_name: Kueffner, Konstantin
  id: 8121a2d0-dc85-11ea-9058-af578f3b4515
  last_name: Kueffner
  orcid: 0000-0001-8974-2542
- first_name: Kaushik
  full_name: Mallik, Kaushik
  id: 0834ff3c-6d72-11ec-94e0-b5b0a4fb8598
  last_name: Mallik
  orcid: 0000-0001-9864-7475
citation:
  ama: 'Cano F, Henzinger TA, Könighofer B, Kueffner K, Mallik K. Abstraction-based
    decision making for statistical properties. In: <i>9th International Conference
    on Formal Structures for Computation and Deduction</i>. Vol 299. Schloss Dagstuhl
    - Leibniz-Zentrum für Informatik; 2024. doi:<a href="https://doi.org/10.4230/LIPIcs.FSCD.2024.2">10.4230/LIPIcs.FSCD.2024.2</a>'
  apa: 'Cano, F., Henzinger, T. A., Könighofer, B., Kueffner, K., &#38; Mallik, K.
    (2024). Abstraction-based decision making for statistical properties. In <i>9th
    International Conference on Formal Structures for Computation and Deduction</i>
    (Vol. 299). Tallinn, Estonia: Schloss Dagstuhl - Leibniz-Zentrum für Informatik.
    <a href="https://doi.org/10.4230/LIPIcs.FSCD.2024.2">https://doi.org/10.4230/LIPIcs.FSCD.2024.2</a>'
  chicago: Cano, Filip, Thomas A Henzinger, Bettina Könighofer, Konstantin Kueffner,
    and Kaushik Mallik. “Abstraction-Based Decision Making for Statistical Properties.”
    In <i>9th International Conference on Formal Structures for Computation and Deduction</i>,
    Vol. 299. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2024. <a href="https://doi.org/10.4230/LIPIcs.FSCD.2024.2">https://doi.org/10.4230/LIPIcs.FSCD.2024.2</a>.
  ieee: F. Cano, T. A. Henzinger, B. Könighofer, K. Kueffner, and K. Mallik, “Abstraction-based
    decision making for statistical properties,” in <i>9th International Conference
    on Formal Structures for Computation and Deduction</i>, Tallinn, Estonia, 2024,
    vol. 299.
  ista: 'Cano F, Henzinger TA, Könighofer B, Kueffner K, Mallik K. 2024. Abstraction-based
    decision making for statistical properties. 9th International Conference on Formal
    Structures for Computation and Deduction. FSCD: Conference on Formal Structures
    for Computation and Deduction, LIPIcs, vol. 299, 2.'
  mla: Cano, Filip, et al. “Abstraction-Based Decision Making for Statistical Properties.”
    <i>9th International Conference on Formal Structures for Computation and Deduction</i>,
    vol. 299, 2, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2024, doi:<a href="https://doi.org/10.4230/LIPIcs.FSCD.2024.2">10.4230/LIPIcs.FSCD.2024.2</a>.
  short: F. Cano, T.A. Henzinger, B. Könighofer, K. Kueffner, K. Mallik, in:, 9th
    International Conference on Formal Structures for Computation and Deduction, Schloss
    Dagstuhl - Leibniz-Zentrum für Informatik, 2024.
conference:
  end_date: 2024-07-13
  location: Tallinn, Estonia
  name: 'FSCD: Conference on Formal Structures for Computation and Deduction'
  start_date: 2024-07-10
corr_author: '1'
date_created: 2024-07-28T22:01:09Z
date_published: 2024-07-01T00:00:00Z
date_updated: 2025-12-02T13:43:50Z
day: '01'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.4230/LIPIcs.FSCD.2024.2
ec_funded: 1
external_id:
  isi:
  - '001587746100002'
file:
- access_level: open_access
  checksum: cc6bb89be0eaa404a6ce019392cd293e
  content_type: application/pdf
  creator: dernst
  date_created: 2024-07-29T11:15:59Z
  date_updated: 2024-07-29T11:15:59Z
  file_id: '17341'
  file_name: 2024_LIPICs_Cano.pdf
  file_size: 1391381
  relation: main_file
  success: 1
file_date_updated: 2024-07-29T11:15:59Z
has_accepted_license: '1'
intvolume: '       299'
isi: 1
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
  call_identifier: H2020
  grant_number: '101020093'
  name: Vigilant Algorithmic Monitoring of Software
publication: 9th International Conference on Formal Structures for Computation and
  Deduction
publication_identifier:
  isbn:
  - '9783959773232'
  issn:
  - 1868-8969
publication_status: published
publisher: Schloss Dagstuhl - Leibniz-Zentrum für Informatik
quality_controlled: '1'
scopus_import: '1'
status: public
title: Abstraction-based decision making for statistical properties
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 299
year: '2024'
...
---
_id: '17328'
abstract:
- lang: eng
  text: "We study selfish mining attacks in longest-chain blockchains like Bitcoin,
    but where the proof of work is replaced with efficient proof systems - like proofs
    of stake or proofs of space - and consider the problem of computing an optimal
    selfish mining attack which maximizes expected relative revenue of the adversary,
    thus minimizing the chain quality. To this end, we propose a novel selfish mining
    attack that aims to maximize this objective and formally model the attack as a
    Markov decision process (MDP). We then present a formal analysis procedure which
    computes an ϵ-tight lower bound on the optimal expected relative revenue in the
    MDP and a strategy that achieves this ϵ-tight lower bound, where ϵ > 0 may be
    any specified precision. Our analysis is fully automated and provides formal guarantees
    on the correctness. We evaluate our selfish mining attack and observe that it
    achieves superior expected relative revenue compared to two considered baselines.\r\nIn
    concurrent work [Sarenche FC'24] does an automated analysis on selfish mining
    in predictable longest-chain blockchains based on efficient proof systems. Predictable
    means the randomness for the challenges is fixed for many blocks (as used e.g.,
    in Ouroboros), while we consider unpredictable (Bitcoin-like) chains where the
    challenge is derived from the previous block."
acknowledgement: "This work was supported in part by the ERC-2020-CoG 863818 (FoRM-SMArt)
  grant and the MOE-T2EP20122-0014 (Data-Driven Distributed Algorithms) grant.\r\n"
article_processing_charge: Yes (via OA deal)
arxiv: 1
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Amirali
  full_name: Ebrahimzadeh, Amirali
  last_name: Ebrahimzadeh
- first_name: Mehrdad
  full_name: Karrabi, Mehrdad
  id: 67638922-f394-11eb-9cf6-f20423e08757
  last_name: Karrabi
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
- first_name: Michelle X
  full_name: Yeo, Michelle X
  id: 2D82B818-F248-11E8-B48F-1D18A9856A87
  last_name: Yeo
  orcid: 0009-0001-3676-4809
- first_name: Dorde
  full_name: Zikelic, Dorde
  id: 294AA7A6-F248-11E8-B48F-1D18A9856A87
  last_name: Zikelic
  orcid: 0000-0002-4681-1699
citation:
  ama: 'Chatterjee K, Ebrahimzadeh A, Karrabi M, Pietrzak KZ, Yeo MX, Zikelic D. Fully
    automated selfish mining analysis in efficient proof systems blockchains. In:
    <i> Proceedings of the 43rd Annual ACM Symposium on Principles of Distributed
    Computing</i>. Association for Computing Machinery; 2024:268-278. doi:<a href="https://doi.org/10.1145/3662158.3662769">10.1145/3662158.3662769</a>'
  apa: 'Chatterjee, K., Ebrahimzadeh, A., Karrabi, M., Pietrzak, K. Z., Yeo, M. X.,
    &#38; Zikelic, D. (2024). Fully automated selfish mining analysis in efficient
    proof systems blockchains. In <i> Proceedings of the 43rd Annual ACM Symposium
    on Principles of Distributed Computing</i> (pp. 268–278). Nantes, France: Association
    for Computing Machinery. <a href="https://doi.org/10.1145/3662158.3662769">https://doi.org/10.1145/3662158.3662769</a>'
  chicago: Chatterjee, Krishnendu, Amirali Ebrahimzadeh, Mehrdad Karrabi, Krzysztof
    Z Pietrzak, Michelle X Yeo, and Dorde Zikelic. “Fully Automated Selfish Mining
    Analysis in Efficient Proof Systems Blockchains.” In <i> Proceedings of the 43rd
    Annual ACM Symposium on Principles of Distributed Computing</i>, 268–78. Association
    for Computing Machinery, 2024. <a href="https://doi.org/10.1145/3662158.3662769">https://doi.org/10.1145/3662158.3662769</a>.
  ieee: K. Chatterjee, A. Ebrahimzadeh, M. Karrabi, K. Z. Pietrzak, M. X. Yeo, and
    D. Zikelic, “Fully automated selfish mining analysis in efficient proof systems
    blockchains,” in <i> Proceedings of the 43rd Annual ACM Symposium on Principles
    of Distributed Computing</i>, Nantes, France, 2024, pp. 268–278.
  ista: 'Chatterjee K, Ebrahimzadeh A, Karrabi M, Pietrzak KZ, Yeo MX, Zikelic D.
    2024. Fully automated selfish mining analysis in efficient proof systems blockchains.  Proceedings
    of the 43rd Annual ACM Symposium on Principles of Distributed Computing. PODC:
    Symposium on Principles of Distributed Computing, 268–278.'
  mla: Chatterjee, Krishnendu, et al. “Fully Automated Selfish Mining Analysis in
    Efficient Proof Systems Blockchains.” <i> Proceedings of the 43rd Annual ACM Symposium
    on Principles of Distributed Computing</i>, Association for Computing Machinery,
    2024, pp. 268–78, doi:<a href="https://doi.org/10.1145/3662158.3662769">10.1145/3662158.3662769</a>.
  short: K. Chatterjee, A. Ebrahimzadeh, M. Karrabi, K.Z. Pietrzak, M.X. Yeo, D. Zikelic,
    in:,  Proceedings of the 43rd Annual ACM Symposium on Principles of Distributed
    Computing, Association for Computing Machinery, 2024, pp. 268–278.
conference:
  end_date: 2024-06-21
  location: Nantes, France
  name: 'PODC: Symposium on Principles of Distributed Computing'
  start_date: 2024-06-17
corr_author: '1'
date_created: 2024-07-28T22:01:10Z
date_published: 2024-06-17T00:00:00Z
date_updated: 2025-04-14T07:52:47Z
day: '17'
ddc:
- '000'
department:
- _id: KrCh
- _id: KrPi
doi: 10.1145/3662158.3662769
ec_funded: 1
external_id:
  arxiv:
  - '2405.04420'
file:
- access_level: open_access
  checksum: 6122bd97b42751ff81c452a19970f67d
  content_type: application/pdf
  creator: dernst
  date_created: 2024-07-29T07:18:12Z
  date_updated: 2024-07-29T07:18:12Z
  file_id: '17334'
  file_name: 2024_ACM_Chatterjee.pdf
  file_size: 832034
  relation: main_file
  success: 1
file_date_updated: 2024-07-29T07:18:12Z
has_accepted_license: '1'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: 268-278
project:
- _id: 0599E47C-7A3F-11EA-A408-12923DDC885E
  call_identifier: H2020
  grant_number: '863818'
  name: 'Formal Methods for Stochastic Models: Algorithms and Applications'
publication: ' Proceedings of the 43rd Annual ACM Symposium on Principles of Distributed
  Computing'
publication_identifier:
  isbn:
  - '9798400706684'
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
scopus_import: '1'
status: public
title: Fully automated selfish mining analysis in efficient proof systems blockchains
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2024'
...
---
_id: '17329'
abstract:
- lang: eng
  text: 'We initiate the study of game dynamics in the population protocol model:
    n agents each maintain a current local strategy and interact in pairs uniformly
    at random. Upon each interaction, the agents play a two-person game and receive
    a payoff from an underlying utility function, and they can subsequently update
    their strategies according to a fixed local algorithm. In this setting, we ask
    how the distribution over agent strategies evolves over a sequence of interactions,
    and we introduce a new distributional equilibrium concept to quantify the quality
    of such distributions. As an initial example, we study a class of repeated prisoner''s
    dilemma games, and we consider a family of simple local update algorithms that
    yield non-trivial dynamics over the distribution of agent strategies. We show
    that these dynamics are related to a new class of high-dimensional Ehrenfest random
    walks, and we derive exact characterizations of their stationary distributions,
    bounds on their mixing times, and prove their convergence to approximate distributional
    equilibria. Our results highlight trade-offs between the local state space of
    each agent, and the convergence rate and approximation factor of the underlying
    dynamics. Our approach opens the door towards the further characterization of
    equilibrium computation for other classes of games and dynamics in the population
    setting.'
acknowledgement: This work was supported in part by the ERC-2020-CoG 863818 (FoRM-SMArt)
  grant. We thank James Aspnes and Thomas Sauerwald for several helpful discussions
  on Ehrenfest random walks.
article_processing_charge: Yes (via OA deal)
author:
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Mehrdad
  full_name: Karrabi, Mehrdad
  id: 67638922-f394-11eb-9cf6-f20423e08757
  last_name: Karrabi
- first_name: John M
  full_name: Lazarsfeld, John M
  id: 17ce3656-183e-11ef-84c3-8932383e1b23
  last_name: Lazarsfeld
citation:
  ama: 'Alistarh D-A, Chatterjee K, Karrabi M, Lazarsfeld JM. Game dynamics and equilibrium
    computation in the population protocol model. In: <i>Proceedings of the 43rd Annual
    ACM Symposium on Principles of Distributed Computing</i>. Association for Computing
    Machinery; 2024:40-49. doi:<a href="https://doi.org/10.1145/3662158.3662768">10.1145/3662158.3662768</a>'
  apa: 'Alistarh, D.-A., Chatterjee, K., Karrabi, M., &#38; Lazarsfeld, J. M. (2024).
    Game dynamics and equilibrium computation in the population protocol model. In
    <i>Proceedings of the 43rd Annual ACM Symposium on Principles of Distributed Computing</i>
    (pp. 40–49). Nantes, France: Association for Computing Machinery. <a href="https://doi.org/10.1145/3662158.3662768">https://doi.org/10.1145/3662158.3662768</a>'
  chicago: Alistarh, Dan-Adrian, Krishnendu Chatterjee, Mehrdad Karrabi, and John
    M Lazarsfeld. “Game Dynamics and Equilibrium Computation in the Population Protocol
    Model.” In <i>Proceedings of the 43rd Annual ACM Symposium on Principles of Distributed
    Computing</i>, 40–49. Association for Computing Machinery, 2024. <a href="https://doi.org/10.1145/3662158.3662768">https://doi.org/10.1145/3662158.3662768</a>.
  ieee: D.-A. Alistarh, K. Chatterjee, M. Karrabi, and J. M. Lazarsfeld, “Game dynamics
    and equilibrium computation in the population protocol model,” in <i>Proceedings
    of the 43rd Annual ACM Symposium on Principles of Distributed Computing</i>, Nantes,
    France, 2024, pp. 40–49.
  ista: 'Alistarh D-A, Chatterjee K, Karrabi M, Lazarsfeld JM. 2024. Game dynamics
    and equilibrium computation in the population protocol model. Proceedings of the
    43rd Annual ACM Symposium on Principles of Distributed Computing. PODC: Symposium
    on Principles of Distributed Computing, 40–49.'
  mla: Alistarh, Dan-Adrian, et al. “Game Dynamics and Equilibrium Computation in
    the Population Protocol Model.” <i>Proceedings of the 43rd Annual ACM Symposium
    on Principles of Distributed Computing</i>, Association for Computing Machinery,
    2024, pp. 40–49, doi:<a href="https://doi.org/10.1145/3662158.3662768">10.1145/3662158.3662768</a>.
  short: D.-A. Alistarh, K. Chatterjee, M. Karrabi, J.M. Lazarsfeld, in:, Proceedings
    of the 43rd Annual ACM Symposium on Principles of Distributed Computing, Association
    for Computing Machinery, 2024, pp. 40–49.
conference:
  end_date: 2024-06-21
  location: Nantes, France
  name: 'PODC: Symposium on Principles of Distributed Computing'
  start_date: 2024-06-17
corr_author: '1'
date_created: 2024-07-28T22:01:10Z
date_published: 2024-06-17T00:00:00Z
date_updated: 2025-04-14T07:52:47Z
day: '17'
ddc:
- '000'
department:
- _id: DaAl
- _id: KrCh
doi: 10.1145/3662158.3662768
ec_funded: 1
file:
- access_level: open_access
  checksum: 65a40437f83373fa79dd999d5287509e
  content_type: application/pdf
  creator: dernst
  date_created: 2024-07-29T07:37:31Z
  date_updated: 2024-07-29T07:37:31Z
  file_id: '17335'
  file_name: 2024_ACMPODC_Alistarh.pdf
  file_size: 750908
  relation: main_file
  success: 1
file_date_updated: 2024-07-29T07:37:31Z
has_accepted_license: '1'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: 40-49
project:
- _id: 0599E47C-7A3F-11EA-A408-12923DDC885E
  call_identifier: H2020
  grant_number: '863818'
  name: 'Formal Methods for Stochastic Models: Algorithms and Applications'
publication: Proceedings of the 43rd Annual ACM Symposium on Principles of Distributed
  Computing
publication_identifier:
  isbn:
  - '9798400706684'
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
scopus_import: '1'
status: public
title: Game dynamics and equilibrium computation in the population protocol model
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2024'
...
---
OA_place: repository
OA_type: green
_id: '17330'
abstract:
- lang: eng
  text: In this work we consider the list-decodability and list-recoverability of
    arbitrary q -ary codes, for all integer values of q ⩾ 2. A code is called ( p
    , L ) q -list-decodable if every radius pn Hamming ball contains less than L codewords;
    ( p , ℓ, L ) q -recoverability is a generalization where we place radius pn Hamming
    balls on every point of a combinatorial rectangle with side length ℓ and again
    stipulate that there be less than L codewords. Our main contribution is to precisely
    calculate the maximum value of p for which there exist infinite families of positive
    rate ( p , ℓ, L ) q -list-recoverable codes, the quantity we call the zero-rate
    threshold . Denoting this value by p *, we in fact show that codes correcting
    a p * + ε fraction of errors must have size O ε (1), i.e., independent of n .
    Such a result is typically referred to as a “Plotkin bound.” To complement this,
    a standard random code with expurgation construction shows that there exist positive
    rate codes correcting a p * − ε fraction of errors. We also follow a classical
    proof template (typically attributed to Elias and Bassalygo) to derive from the
    zero-rate threshold other tradeoffs between rate and decoding radius for list-decoding
    and list-recovery. Technically, proving the Plotkin bound boils down to demon-strating
    the Schur convexity of a certain function defined on the q -simplex as well as
    the convexity of a univariate function derived from it. We remark that an earlier
    argument claimed similar results for q -ary list-decoding; however, we point out
    that this earlier proof is flawed.
acknowledgement: Part of this work was done while Nicolas Resch was affiliated with
  the Centrum Wiskunde & Informatica and supported in part by ERC H2020 grant No.74079
  (ALGSTRONGCRYPTO). Chen Yuan is supported in part by the National Key Research and
  Development Projects under Grant 2022YFA1004900 and Grant 2021YFE0109900, the National
  Natural Science Foundation of China under Grant 12101403 and Grant 12031011.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Nicolas
  full_name: Resch, Nicolas
  last_name: Resch
- first_name: Chen
  full_name: Yuan, Chen
  last_name: Yuan
- first_name: Yihan
  full_name: Zhang, Yihan
  id: 2ce5da42-b2ea-11eb-bba5-9f264e9d002c
  last_name: Zhang
  orcid: 0000-0002-6465-6258
citation:
  ama: Resch N, Yuan C, Zhang Y. Zero-rate thresholds and new capacity bounds for
    list-decoding and list-recovery. <i>IEEE Transactions on Information Theory</i>.
    2024;70(9):6211-6238. doi:<a href="https://doi.org/10.1109/TIT.2024.3430842">10.1109/TIT.2024.3430842</a>
  apa: Resch, N., Yuan, C., &#38; Zhang, Y. (2024). Zero-rate thresholds and new capacity
    bounds for list-decoding and list-recovery. <i>IEEE Transactions on Information
    Theory</i>. IEEE. <a href="https://doi.org/10.1109/TIT.2024.3430842">https://doi.org/10.1109/TIT.2024.3430842</a>
  chicago: Resch, Nicolas, Chen Yuan, and Yihan Zhang. “Zero-Rate Thresholds and New
    Capacity Bounds for List-Decoding and List-Recovery.” <i>IEEE Transactions on
    Information Theory</i>. IEEE, 2024. <a href="https://doi.org/10.1109/TIT.2024.3430842">https://doi.org/10.1109/TIT.2024.3430842</a>.
  ieee: N. Resch, C. Yuan, and Y. Zhang, “Zero-rate thresholds and new capacity bounds
    for list-decoding and list-recovery,” <i>IEEE Transactions on Information Theory</i>,
    vol. 70, no. 9. IEEE, pp. 6211–6238, 2024.
  ista: Resch N, Yuan C, Zhang Y. 2024. Zero-rate thresholds and new capacity bounds
    for list-decoding and list-recovery. IEEE Transactions on Information Theory.
    70(9), 6211–6238.
  mla: Resch, Nicolas, et al. “Zero-Rate Thresholds and New Capacity Bounds for List-Decoding
    and List-Recovery.” <i>IEEE Transactions on Information Theory</i>, vol. 70, no.
    9, IEEE, 2024, pp. 6211–38, doi:<a href="https://doi.org/10.1109/TIT.2024.3430842">10.1109/TIT.2024.3430842</a>.
  short: N. Resch, C. Yuan, Y. Zhang, IEEE Transactions on Information Theory 70 (2024)
    6211–6238.
corr_author: '1'
date_created: 2024-07-28T22:01:10Z
date_published: 2024-09-01T00:00:00Z
date_updated: 2025-09-08T08:31:53Z
day: '01'
department:
- _id: MaMo
doi: 10.1109/TIT.2024.3430842
external_id:
  arxiv:
  - '2210.07754'
  isi:
  - '001299623600019'
intvolume: '        70'
isi: 1
issue: '9'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2210.07754
month: '09'
oa: 1
oa_version: Preprint
page: 6211-6238
publication: IEEE Transactions on Information Theory
publication_identifier:
  eissn:
  - 1557-9654
  issn:
  - 0018-9448
publication_status: published
publisher: IEEE
quality_controlled: '1'
related_material:
  record:
  - id: '14083'
    relation: earlier_version
    status: public
scopus_import: '1'
status: public
title: Zero-rate thresholds and new capacity bounds for list-decoding and list-recovery
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 70
year: '2024'
...
---
OA_place: repository
OA_type: green
_id: '17331'
abstract:
- lang: eng
  text: Amyloidosis are a group of diseases in which soluble proteins aggregate and
    deposit in fibrillar conformation extracellularly in tissues. The effectiveness
    of therapeutic strategies depends on the specific protein involved, being crucial
    to accurately determine its nature. Moreover, following the diagnosis, the search
    for the mutation within relatives allows the clinical advice. Here we report the
    precise diagnosis and explored the possible reasons of the structural pathogenicity
    for a renal amyloidosis related to a fibrinogen Aα-chain variant. Whole-exome
    sequencing and GATK calling pipeline were leveraged to characterize the protein
    variant present in a patient with kidney failure. Bioinformatics strategies were
    applied to suggest potential explanations of the variants aggregation. Our pipeline
    allowed the identification of a single-point variant of fibrinogen Aα-chain, which
    opened the possibility of curative transplantation. In silico structural analysis
    suggested that the pathogenicity of the variant may be attributed to a heightened
    susceptibility to yield a peptide prone to deposit as an oligomer with a β-sheet
    structure. Exploiting the comprehensive coverage of whole-genome sequencing, we
    managed to fill a vacant stage in the diagnosis of hereditary amyloidosis and
    to stimulate the advancement in biomedicine.
acknowledgement: The authors acknowledge Rosana del Cid for her help with English
  corrections, Mario Ramos for the figure editions, and Gabriela Finarelli for technical
  assistance. S.A. Rosú, N.A. Ramella, and M.A. Tricerri acknowledge support from
  Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET) (Grant PIP
  11220200102381), Agencia Nacional de Promoción Científica y Tecnológica (PICT 2019-03592),
  Universidad Nacional de La Plata (UNLP) (Grants M234 and PPID M014), and Fundación
  Florencio Fiorini. The authors warmly thank M.P. for her willingness to conduct
  these studies.
article_processing_charge: No
article_type: original
author:
- first_name: Elizabeth R
  full_name: Cattaneo, Elizabeth R
  last_name: Cattaneo
- first_name: Romina A
  full_name: Gisonno, Romina A
  id: a9e08d76-6a98-11ec-8f7b-c777fe5ca519
  last_name: Gisonno
- first_name: Martín C
  full_name: Abba, Martín C
  last_name: Abba
- first_name: Marianela
  full_name: Santana, Marianela
  last_name: Santana
- first_name: Silvana A
  full_name: Rosú, Silvana A
  last_name: Rosú
- first_name: Elsa
  full_name: Nucifora, Elsa
  last_name: Nucifora
- first_name: María A
  full_name: Aguirre, María A
  last_name: Aguirre
- first_name: María C
  full_name: Giordani, María C
  last_name: Giordani
- first_name: M. Alejandra
  full_name: Tricerri, M. Alejandra
  last_name: Tricerri
- first_name: Nahuel A
  full_name: Ramella, Nahuel A
  last_name: Ramella
citation:
  ama: 'Cattaneo ER, Gisonno RA, Abba MC, et al. Hereditary amyloidosis: Insights
    into a fibrinogen A variant protein. <i>Proteins: Structure, Function and Bioinformatics</i>.
    2024;92(12):1366-1374. doi:<a href="https://doi.org/10.1002/prot.26732">10.1002/prot.26732</a>'
  apa: 'Cattaneo, E. R., Gisonno, R. A., Abba, M. C., Santana, M., Rosú, S. A., Nucifora,
    E., … Ramella, N. A. (2024). Hereditary amyloidosis: Insights into a fibrinogen
    A variant protein. <i>Proteins: Structure, Function and Bioinformatics</i>. Wiley.
    <a href="https://doi.org/10.1002/prot.26732">https://doi.org/10.1002/prot.26732</a>'
  chicago: 'Cattaneo, Elizabeth R, Romina A Gisonno, Martín C Abba, Marianela Santana,
    Silvana A Rosú, Elsa Nucifora, María A Aguirre, María C Giordani, M. Alejandra
    Tricerri, and Nahuel A Ramella. “Hereditary Amyloidosis: Insights into a Fibrinogen
    A Variant Protein.” <i>Proteins: Structure, Function and Bioinformatics</i>. Wiley,
    2024. <a href="https://doi.org/10.1002/prot.26732">https://doi.org/10.1002/prot.26732</a>.'
  ieee: 'E. R. Cattaneo <i>et al.</i>, “Hereditary amyloidosis: Insights into a fibrinogen
    A variant protein,” <i>Proteins: Structure, Function and Bioinformatics</i>, vol.
    92, no. 12. Wiley, pp. 1366–1374, 2024.'
  ista: 'Cattaneo ER, Gisonno RA, Abba MC, Santana M, Rosú SA, Nucifora E, Aguirre
    MA, Giordani MC, Tricerri MA, Ramella NA. 2024. Hereditary amyloidosis: Insights
    into a fibrinogen A variant protein. Proteins: Structure, Function and Bioinformatics.
    92(12), 1366–1374.'
  mla: 'Cattaneo, Elizabeth R., et al. “Hereditary Amyloidosis: Insights into a Fibrinogen
    A Variant Protein.” <i>Proteins: Structure, Function and Bioinformatics</i>, vol.
    92, no. 12, Wiley, 2024, pp. 1366–74, doi:<a href="https://doi.org/10.1002/prot.26732">10.1002/prot.26732</a>.'
  short: 'E.R. Cattaneo, R.A. Gisonno, M.C. Abba, M. Santana, S.A. Rosú, E. Nucifora,
    M.A. Aguirre, M.C. Giordani, M.A. Tricerri, N.A. Ramella, Proteins: Structure,
    Function and Bioinformatics 92 (2024) 1366–1374.'
date_created: 2024-07-28T22:01:10Z
date_published: 2024-12-01T00:00:00Z
date_updated: 2025-09-08T08:33:53Z
day: '01'
department:
- _id: GaNo
doi: 10.1002/prot.26732
external_id:
  isi:
  - '001272128100001'
  pmid:
  - '39031927'
intvolume: '        92'
isi: 1
issue: '12'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.22541/au.171804763.37967262/v1
month: '12'
oa: 1
oa_version: Preprint
page: 1366-1374
pmid: 1
publication: 'Proteins: Structure, Function and Bioinformatics'
publication_identifier:
  eissn:
  - 1097-0134
  issn:
  - 0887-3585
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Hereditary amyloidosis: Insights into a fibrinogen A variant protein'
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 92
year: '2024'
...
---
_id: '17332'
abstract:
- lang: eng
  text: 'Tree data structures, such as red-black trees, quad trees, treaps, or tries,
    are fundamental tools in computer science. A classical problem in concurrency
    is to obtain expressive, efficient, and scalable versions of practical tree data
    structures. We are interested in concurrent trees supporting range queries, i.e.,
    queries that involve multiple consecutive data items. Existing implementations
    with this capability can list keys in a specific range, but do not support aggregate
    range queries: for instance, if we want to calculate the number of keys in a range,
    the only choice is to retrieve a whole list and return its size. This is suboptimal:
    in the sequential setting, one can augment a balanced search tree with counters
    and, consequently, perform these aggregate requests in logarithmic rather than
    linear time.In this paper, we propose a generic approach to implement a broad
    class of range queries on concurrent trees in a way that is wait-free, asymptotically
    efficient, and practically scalable. The key idea is a new mechanism for maintaining
    metadata concurrently at tree nodes, which can be seen as a wait-free variant
    of hand-over-hand locking (which we call hand-over-hand helping). We did a preliminary
    implementation of the wait-free binary search tree and preliminary experiments
    have indicated the soundness of our approach.'
acknowledgement: We thank Trevor Brown and Yuanhao Wei for the discussion and anonymous
  reviewers for helping us to improve the paper. Also, we thank JetBrains and Huawei
  for their support.
article_processing_charge: No
arxiv: 1
author:
- first_name: Ilya
  full_name: Kokorin, Ilya
  last_name: Kokorin
- first_name: Victor
  full_name: Yudov, Victor
  last_name: Yudov
- first_name: Vitaly
  full_name: Aksenov, Vitaly
  last_name: Aksenov
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
citation:
  ama: 'Kokorin I, Yudov V, Aksenov V, Alistarh D-A. Wait-free trees with asymptotically-efficient
    range queries. In: <i>2024 IEEE International Parallel and Distributed Processing
    Symposium</i>. IEEE; 2024:169-179. doi:<a href="https://doi.org/10.1109/IPDPS57955.2024.00023">10.1109/IPDPS57955.2024.00023</a>'
  apa: 'Kokorin, I., Yudov, V., Aksenov, V., &#38; Alistarh, D.-A. (2024). Wait-free
    trees with asymptotically-efficient range queries. In <i>2024 IEEE International
    Parallel and Distributed Processing Symposium</i> (pp. 169–179). San Francisco,
    CA, United States: IEEE. <a href="https://doi.org/10.1109/IPDPS57955.2024.00023">https://doi.org/10.1109/IPDPS57955.2024.00023</a>'
  chicago: Kokorin, Ilya, Victor Yudov, Vitaly Aksenov, and Dan-Adrian Alistarh. “Wait-Free
    Trees with Asymptotically-Efficient Range Queries.” In <i>2024 IEEE International
    Parallel and Distributed Processing Symposium</i>, 169–79. IEEE, 2024. <a href="https://doi.org/10.1109/IPDPS57955.2024.00023">https://doi.org/10.1109/IPDPS57955.2024.00023</a>.
  ieee: I. Kokorin, V. Yudov, V. Aksenov, and D.-A. Alistarh, “Wait-free trees with
    asymptotically-efficient range queries,” in <i>2024 IEEE International Parallel
    and Distributed Processing Symposium</i>, San Francisco, CA, United States, 2024,
    pp. 169–179.
  ista: 'Kokorin I, Yudov V, Aksenov V, Alistarh D-A. 2024. Wait-free trees with asymptotically-efficient
    range queries. 2024 IEEE International Parallel and Distributed Processing Symposium.
    IPDPS: International Parallel and Distributed Processing Symposium, 169–179.'
  mla: Kokorin, Ilya, et al. “Wait-Free Trees with Asymptotically-Efficient Range
    Queries.” <i>2024 IEEE International Parallel and Distributed Processing Symposium</i>,
    IEEE, 2024, pp. 169–79, doi:<a href="https://doi.org/10.1109/IPDPS57955.2024.00023">10.1109/IPDPS57955.2024.00023</a>.
  short: I. Kokorin, V. Yudov, V. Aksenov, D.-A. Alistarh, in:, 2024 IEEE International
    Parallel and Distributed Processing Symposium, IEEE, 2024, pp. 169–179.
conference:
  end_date: 2024-05-31
  location: San Francisco, CA, United States
  name: 'IPDPS: International Parallel and Distributed Processing Symposium'
  start_date: 2024-05-27
corr_author: '1'
date_created: 2024-07-28T22:01:11Z
date_published: 2024-07-08T00:00:00Z
date_updated: 2025-09-08T08:29:45Z
day: '08'
department:
- _id: DaAl
doi: 10.1109/IPDPS57955.2024.00023
external_id:
  arxiv:
  - '2310.05293'
  isi:
  - '001270389600078'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2310.05293
month: '07'
oa: 1
oa_version: Preprint
page: 169-179
publication: 2024 IEEE International Parallel and Distributed Processing Symposium
publication_identifier:
  eissn:
  - 1530-2075
  isbn:
  - '9798350337662'
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Wait-free trees with asymptotically-efficient range queries
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
year: '2024'
...
---
_id: '17333'
abstract:
- lang: eng
  text: Aqueous zinc-ion batteries are attractive due to their low cost, environmental
    friendliness, and exceptional performance, but the latter remains poorly understood.
    Now, a fast catalytic step involved in oxygen redox catalysis is shown to contribute
    to capacity at a high rate.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Soumyadip
  full_name: Mondal, Soumyadip
  id: d25d21ef-dc8d-11ea-abe3-ec4576307f48
  last_name: Mondal
- first_name: Stefan Alexander
  full_name: Freunberger, Stefan Alexander
  id: A8CA28E6-CE23-11E9-AD2D-EC27E6697425
  last_name: Freunberger
  orcid: 0000-0003-2902-5319
citation:
  ama: Mondal S, Freunberger SA. Catalysing rate and capacity. <i>Nature Catalysis</i>.
    2024;7(7):759-760. doi:<a href="https://doi.org/10.1038/s41929-024-01184-7">10.1038/s41929-024-01184-7</a>
  apa: Mondal, S., &#38; Freunberger, S. A. (2024). Catalysing rate and capacity.
    <i>Nature Catalysis</i>. Springer Nature. <a href="https://doi.org/10.1038/s41929-024-01184-7">https://doi.org/10.1038/s41929-024-01184-7</a>
  chicago: Mondal, Soumyadip, and Stefan Alexander Freunberger. “Catalysing Rate and
    Capacity.” <i>Nature Catalysis</i>. Springer Nature, 2024. <a href="https://doi.org/10.1038/s41929-024-01184-7">https://doi.org/10.1038/s41929-024-01184-7</a>.
  ieee: S. Mondal and S. A. Freunberger, “Catalysing rate and capacity,” <i>Nature
    Catalysis</i>, vol. 7, no. 7. Springer Nature, pp. 759–760, 2024.
  ista: Mondal S, Freunberger SA. 2024. Catalysing rate and capacity. Nature Catalysis.
    7(7), 759–760.
  mla: Mondal, Soumyadip, and Stefan Alexander Freunberger. “Catalysing Rate and Capacity.”
    <i>Nature Catalysis</i>, vol. 7, no. 7, Springer Nature, 2024, pp. 759–60, doi:<a
    href="https://doi.org/10.1038/s41929-024-01184-7">10.1038/s41929-024-01184-7</a>.
  short: S. Mondal, S.A. Freunberger, Nature Catalysis 7 (2024) 759–760.
corr_author: '1'
date_created: 2024-07-29T07:05:33Z
date_published: 2024-07-26T00:00:00Z
date_updated: 2025-09-08T08:30:59Z
day: '26'
department:
- _id: StFr
doi: 10.1038/s41929-024-01184-7
external_id:
  isi:
  - '001278986700012'
intvolume: '         7'
isi: 1
issue: '7'
language:
- iso: eng
month: '07'
oa_version: None
page: 759-760
publication: Nature Catalysis
publication_identifier:
  issn:
  - 2520-1158
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Catalysing rate and capacity
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 7
year: '2024'
...
---
_id: '17344'
abstract:
- lang: eng
  text: 'This file contains the Mathematica notebook associated with the paper Effect
    of assortative mating and sexual selection on polygenic barriers to gene flow.
    It contains the numerical approximations, analyses, and simulations used in the
    study. '
acknowledged_ssus:
- _id: ScienComp
article_processing_charge: No
author:
- first_name: Parvathy
  full_name: Surendranadh, Parvathy
  id: 455235B8-F248-11E8-B48F-1D18A9856A87
  last_name: Surendranadh
  orcid: 0000-0001-6395-386X
- first_name: Himani
  full_name: Sachdeva, Himani
  last_name: Sachdeva
citation:
  ama: Surendranadh P, Sachdeva H. Mathematica notebook for “Effect of assortative
    mating and sexual selection on polygenic barriers to gene flow.” 2024. doi:<a
    href="https://doi.org/10.15479/AT:ISTA:17344">10.15479/AT:ISTA:17344</a>
  apa: Surendranadh, P., &#38; Sachdeva, H. (2024). Mathematica notebook for “Effect
    of assortative mating and sexual selection on polygenic barriers to gene flow.”
    Institute of Science and Technology Austria. <a href="https://doi.org/10.15479/AT:ISTA:17344">https://doi.org/10.15479/AT:ISTA:17344</a>
  chicago: Surendranadh, Parvathy, and Himani Sachdeva. “Mathematica Notebook for
    ‘Effect of Assortative Mating and Sexual Selection on Polygenic Barriers to Gene
    Flow.’” Institute of Science and Technology Austria, 2024. <a href="https://doi.org/10.15479/AT:ISTA:17344">https://doi.org/10.15479/AT:ISTA:17344</a>.
  ieee: P. Surendranadh and H. Sachdeva, “Mathematica notebook for ‘Effect of assortative
    mating and sexual selection on polygenic barriers to gene flow.’” Institute of
    Science and Technology Austria, 2024.
  ista: Surendranadh P, Sachdeva H. 2024. Mathematica notebook for ‘Effect of assortative
    mating and sexual selection on polygenic barriers to gene flow’, Institute of
    Science and Technology Austria, <a href="https://doi.org/10.15479/AT:ISTA:17344">10.15479/AT:ISTA:17344</a>.
  mla: Surendranadh, Parvathy, and Himani Sachdeva. <i>Mathematica Notebook for “Effect
    of Assortative Mating and Sexual Selection on Polygenic Barriers to Gene Flow.”</i>
    Institute of Science and Technology Austria, 2024, doi:<a href="https://doi.org/10.15479/AT:ISTA:17344">10.15479/AT:ISTA:17344</a>.
  short: P. Surendranadh, H. Sachdeva, (2024).
date_created: 2024-07-29T14:01:43Z
date_published: 2024-07-01T00:00:00Z
date_updated: 2025-01-14T13:02:59Z
ddc:
- '576'
department:
- _id: GradSch
- _id: NiBa
doi: 10.15479/AT:ISTA:17344
file:
- access_level: open_access
  checksum: 75bdbc7ad7cc6afe4459bc4a8824a302
  content_type: application/octet-stream
  creator: psurendr
  date_created: 2024-07-29T13:51:11Z
  date_updated: 2024-07-29T13:51:11Z
  file_id: '17345'
  file_name: Submission.nb
  file_size: 726132
  relation: main_file
  success: 1
file_date_updated: 2024-07-29T13:51:11Z
has_accepted_license: '1'
month: '07'
oa: 1
oa_version: Published Version
publisher: Institute of Science and Technology Austria
status: public
title: Mathematica notebook for 'Effect of assortative mating and sexual selection
  on polygenic barriers to gene flow'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: research_data
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2024'
...
---
_id: '17372'
abstract:
- lang: eng
  text: 'In this paper, we investigate the global well-posedness of reaction-diffusion
    systems with transport noise on the  d-dimensional torus. We show new global well-posedness
    results for a large class of scalar equations (e.g. the Allen-Cahn equation),
    and dissipative systems (e.g. equations in coagulation dynamics). Moreover, we
    prove global well-posedness for two weakly dissipative systems: Lotka-Volterra
    equations for  d∈{1,2,3,4}  and the Brusselator for  d∈{1,2,3}. Many of the results
    are also new without transport noise. The proofs are based on maximal regularity
    techniques, positivity results, and sharp blow-up criteria developed in our recent
    works, combined with energy estimates based on Itô''s formula and stochastic Gronwall
    inequalities. Key novelties include the introduction of new  Lζ -coercivity/dissipativity
    conditions and the development of an  Lp(Lq) -framework for systems of reaction-diffusion
    equations, which are needed when treating dimensions  d∈{2,3}  in the case of
    cubic or higher order nonlinearities.'
acknowledgement: The first author’s research was supported by the European Research
  Council (ERC) under the European Union’s Horizon 2020 research and innovation programme
  grant 948819. . The second author’s research was supported by the VICI subsidy VI.C.212.027
  of the Netherlands Organisation for Scientific Research (NWO).
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Antonio
  full_name: Agresti, Antonio
  id: 673cd0cc-9b9a-11eb-b144-88f30e1fbb72
  last_name: Agresti
  orcid: 0000-0002-9573-2962
- first_name: Mark
  full_name: Veraar, Mark
  last_name: Veraar
citation:
  ama: 'Agresti A, Veraar M. Reaction-diffusion equations with transport noise and
    critical superlinear diffusion: Global well-posedness of weakly dissipative systems.
    <i>SIAM Journal on Mathematical Analysis</i>. 2024;56(4):4870-4927. doi:<a href="https://doi.org/10.1137/23M1562482">10.1137/23M1562482</a>'
  apa: 'Agresti, A., &#38; Veraar, M. (2024). Reaction-diffusion equations with transport
    noise and critical superlinear diffusion: Global well-posedness of weakly dissipative
    systems. <i>SIAM Journal on Mathematical Analysis</i>. Society for Industrial
    and Applied Mathematics. <a href="https://doi.org/10.1137/23M1562482">https://doi.org/10.1137/23M1562482</a>'
  chicago: 'Agresti, Antonio, and Mark Veraar. “Reaction-Diffusion Equations with
    Transport Noise and Critical Superlinear Diffusion: Global Well-Posedness of Weakly
    Dissipative Systems.” <i>SIAM Journal on Mathematical Analysis</i>. Society for
    Industrial and Applied Mathematics, 2024. <a href="https://doi.org/10.1137/23M1562482">https://doi.org/10.1137/23M1562482</a>.'
  ieee: 'A. Agresti and M. Veraar, “Reaction-diffusion equations with transport noise
    and critical superlinear diffusion: Global well-posedness of weakly dissipative
    systems,” <i>SIAM Journal on Mathematical Analysis</i>, vol. 56, no. 4. Society
    for Industrial and Applied Mathematics, pp. 4870–4927, 2024.'
  ista: 'Agresti A, Veraar M. 2024. Reaction-diffusion equations with transport noise
    and critical superlinear diffusion: Global well-posedness of weakly dissipative
    systems. SIAM Journal on Mathematical Analysis. 56(4), 4870–4927.'
  mla: 'Agresti, Antonio, and Mark Veraar. “Reaction-Diffusion Equations with Transport
    Noise and Critical Superlinear Diffusion: Global Well-Posedness of Weakly Dissipative
    Systems.” <i>SIAM Journal on Mathematical Analysis</i>, vol. 56, no. 4, Society
    for Industrial and Applied Mathematics, 2024, pp. 4870–927, doi:<a href="https://doi.org/10.1137/23M1562482">10.1137/23M1562482</a>.'
  short: A. Agresti, M. Veraar, SIAM Journal on Mathematical Analysis 56 (2024) 4870–4927.
corr_author: '1'
date_created: 2024-08-04T22:01:21Z
date_published: 2024-08-01T00:00:00Z
date_updated: 2025-09-08T08:46:57Z
day: '01'
department:
- _id: JuFi
doi: 10.1137/23M1562482
ec_funded: 1
external_id:
  arxiv:
  - '2301.06897'
  isi:
  - '001315424500021'
intvolume: '        56'
isi: 1
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2301.06897
month: '08'
oa: 1
oa_version: Preprint
page: 4870-4927
project:
- _id: 0aa76401-070f-11eb-9043-b5bb049fa26d
  call_identifier: H2020
  grant_number: '948819'
  name: Bridging Scales in Random Materials
publication: SIAM Journal on Mathematical Analysis
publication_identifier:
  eissn:
  - 1095-7154
  issn:
  - 0036-1410
publication_status: published
publisher: Society for Industrial and Applied Mathematics
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Reaction-diffusion equations with transport noise and critical superlinear
  diffusion: Global well-posedness of weakly dissipative systems'
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 56
year: '2024'
...
---
_id: '17373'
abstract:
- lang: eng
  text: Scanning Kelvin probe microscopy (SKPM) is a powerful technique for investigating
    the electrostatic properties of material surfaces, enabling the imaging of variations
    in work function, topology, surface charge density, or combinations thereof. Regardless
    of the underlying signal source, SKPM results in a voltage image, which is spatially
    distorted due to the finite size of the probe, long-range electrostatic interactions,
    mechanical and electrical noise, and the finite response time of the electronics.
    In order to recover the underlying signal, it is necessary to deconvolve the measurement
    with an appropriate point spread function (PSF) that accounts the aforementioned
    distortions, but determining this PSF is difficult. Here, we describe how such
    PSFs can be determined experimentally and show how they can be used to recover
    the underlying information of interest. We first consider the physical principles
    that enable SKPM and discuss how these affect the system PSF. We then show how
    one can experimentally measure PSFs by looking at well-defined features, and that
    these compare well to simulated PSFs, provided scans are performed extremely slowly
    and carefully. Next, we work at realistic scan speeds and show that the idealized
    PSFs fail to capture temporal distortions in the scan direction. While simulating
    PSFs for these situations would be quite challenging, we show that measuring PSFs
    with similar scan conditions works well. Our approach clarifies the basic principles
    and inherent challenges to SKPM measurements and gives practical methods to improve
    results.
acknowledged_ssus:
- _id: M-Shop
- _id: NanoFab
- _id: LifeSc
- _id: ScienComp
acknowledgement: This project has received funding from the European Research Council
  (ERC) under the European Union’s Horizon 2020 research and innovation program (Grant
  Agreement No. 949120). This research was supported by the Scientific Service Units
  of the Institute of Science and Technology Austria (ISTA) through resources provided
  by the Miba Machine Shop, Nanofabrication Facility, Scientific Computing Facility,
  and Lab Support Facility. The authors wish to thank Dmytro Rak and Juan Carlos Sobarzo
  for letting us use their equipment. The authors wish to thank the contributions
  of the whole Waitukaitis Group for useful discussions and feedback.
article_number: '045305'
article_processing_charge: No
article_type: original
author:
- first_name: Isaac C
  full_name: Lenton, Isaac C
  id: a550210f-223c-11ec-8182-e2d45e817efb
  last_name: Lenton
  orcid: 0000-0002-5010-6984
- first_name: Felix
  full_name: Pertl, Felix
  id: 6313aec0-15b2-11ec-abd3-ed67d16139af
  last_name: Pertl
  orcid: 0000-0003-0463-5794
- first_name: Lubuna B
  full_name: Shafeek, Lubuna B
  id: 3CD37A82-F248-11E8-B48F-1D18A9856A87
  last_name: Shafeek
  orcid: 0000-0001-7180-6050
- first_name: Scott R
  full_name: Waitukaitis, Scott R
  id: 3A1FFC16-F248-11E8-B48F-1D18A9856A87
  last_name: Waitukaitis
  orcid: 0000-0002-2299-3176
citation:
  ama: 'Lenton IC, Pertl F, Shafeek LB, Waitukaitis SR. Beyond the blur: Using experimentally
    determined point spread functions to improve scanning Kelvin probe imaging. <i>Journal
    of Applied Physics</i>. 2024;136(4). doi:<a href="https://doi.org/10.1063/5.0215151">10.1063/5.0215151</a>'
  apa: 'Lenton, I. C., Pertl, F., Shafeek, L. B., &#38; Waitukaitis, S. R. (2024).
    Beyond the blur: Using experimentally determined point spread functions to improve
    scanning Kelvin probe imaging. <i>Journal of Applied Physics</i>. AIP Publishing.
    <a href="https://doi.org/10.1063/5.0215151">https://doi.org/10.1063/5.0215151</a>'
  chicago: 'Lenton, Isaac C, Felix Pertl, Lubuna B Shafeek, and Scott R Waitukaitis.
    “Beyond the Blur: Using Experimentally Determined Point Spread Functions to Improve
    Scanning Kelvin Probe Imaging.” <i>Journal of Applied Physics</i>. AIP Publishing,
    2024. <a href="https://doi.org/10.1063/5.0215151">https://doi.org/10.1063/5.0215151</a>.'
  ieee: 'I. C. Lenton, F. Pertl, L. B. Shafeek, and S. R. Waitukaitis, “Beyond the
    blur: Using experimentally determined point spread functions to improve scanning
    Kelvin probe imaging,” <i>Journal of Applied Physics</i>, vol. 136, no. 4. AIP
    Publishing, 2024.'
  ista: 'Lenton IC, Pertl F, Shafeek LB, Waitukaitis SR. 2024. Beyond the blur: Using
    experimentally determined point spread functions to improve scanning Kelvin probe
    imaging. Journal of Applied Physics. 136(4), 045305.'
  mla: 'Lenton, Isaac C., et al. “Beyond the Blur: Using Experimentally Determined
    Point Spread Functions to Improve Scanning Kelvin Probe Imaging.” <i>Journal of
    Applied Physics</i>, vol. 136, no. 4, 045305, AIP Publishing, 2024, doi:<a href="https://doi.org/10.1063/5.0215151">10.1063/5.0215151</a>.'
  short: I.C. Lenton, F. Pertl, L.B. Shafeek, S.R. Waitukaitis, Journal of Applied
    Physics 136 (2024).
corr_author: '1'
date_created: 2024-08-04T22:01:21Z
date_published: 2024-07-28T00:00:00Z
date_updated: 2025-09-08T08:47:42Z
day: '28'
ddc:
- '530'
department:
- _id: ScWa
- _id: NanoFab
doi: 10.1063/5.0215151
ec_funded: 1
external_id:
  isi:
  - '001281681100003'
file:
- access_level: open_access
  checksum: 6141d05cd68d540a7446dce9490975db
  content_type: application/pdf
  creator: dernst
  date_created: 2024-08-05T08:19:58Z
  date_updated: 2024-08-05T08:19:58Z
  file_id: '17386'
  file_name: 2024_JourApplPhysics_Lenton.pdf
  file_size: 2537502
  relation: main_file
  success: 1
file_date_updated: 2024-08-05T08:19:58Z
has_accepted_license: '1'
intvolume: '       136'
isi: 1
issue: '4'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: 0aa60e99-070f-11eb-9043-a6de6bdc3afa
  call_identifier: H2020
  grant_number: '949120'
  name: 'Tribocharge: a multi-scale approach to an enduring problem in physics'
publication: Journal of Applied Physics
publication_identifier:
  eissn:
  - 1089-7550
  issn:
  - 0021-8979
publication_status: published
publisher: AIP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Beyond the blur: Using experimentally determined point spread functions to
  improve scanning Kelvin probe imaging'
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 136
year: '2024'
...
---
_id: '17374'
abstract:
- lang: eng
  text: Achieving photorealistic 3D view synthesis and relighting of human portraits
    is pivotal for advancing AR/VR applications. Existing methodologies in portrait
    relighting demonstrate substantial limitations in terms of generalization and
    3D consistency, coupled with inaccuracies in physically realistic lighting and
    identity preservation. Furthermore, personalization from a single view is difficult
    to achieve and often requires multiview images during the testing phase or involves
    slow optimization processes. This paper introduces Lite2Relight , a novel technique
    that can predict 3D consistent head poses of portraits while performing physically
    plausible light editing at interactive speed. Our method uniquely extends the
    generative capabilities and efficient volumetric representation of EG3D, leveraging
    a lightstage dataset to implicitly disentangle face reflectance and perform relighting
    under target HDRI environment maps. By utilizing a pre-trained geometry-aware
    encoder and a feature alignment module, we map input images into a relightable
    3D space, enhancing them with a strong face geometry and reflectance prior. Through
    extensive quantitative and qualitative evaluations, we show that our method outperforms
    the state-of-the-art methods in terms of efficacy, photorealism, and practical
    application. This includes producing 3D-consistent results of the full head, including
    hair, eyes, and expressions. Lite2Relight paves the way for large-scale adoption
    of photorealistic portrait editing in various domains, offering a robust, interactive
    solution to a previously constrained problem.
acknowledgement: This work was supported by the ERC Consolidator Grant 4DReply (770784).
  We extend our gratitude to Shrisha Bharadwaj for providing feedback and constant
  support.
article_number: '41'
article_processing_charge: Yes (in subscription journal)
arxiv: 1
author:
- first_name: Pramod
  full_name: Rao, Pramod
  last_name: Rao
- first_name: Gereon
  full_name: Fox, Gereon
  last_name: Fox
- first_name: Abhimitra
  full_name: Meka, Abhimitra
  last_name: Meka
- first_name: B. R.
  full_name: Mallikarjun, B. R.
  last_name: Mallikarjun
- first_name: Fangneng
  full_name: Zhan, Fangneng
  last_name: Zhan
- first_name: Tim
  full_name: Weyrich, Tim
  last_name: Weyrich
- first_name: Bernd
  full_name: Bickel, Bernd
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
- first_name: Hanspeter
  full_name: Pfister, Hanspeter
  last_name: Pfister
- first_name: Wojciech
  full_name: Matusik, Wojciech
  last_name: Matusik
- first_name: Mohamed
  full_name: Elgharib, Mohamed
  last_name: Elgharib
- first_name: Christian
  full_name: Theobalt, Christian
  last_name: Theobalt
citation:
  ama: 'Rao P, Fox G, Meka A, et al. Lite2Relight: 3D-aware single image portrait
    relighting. In: <i>Proceedings - SIGGRAPH 2024 Conference Papers</i>. Association
    for Computing Machinery; 2024. doi:<a href="https://doi.org/10.1145/3641519.3657470">10.1145/3641519.3657470</a>'
  apa: 'Rao, P., Fox, G., Meka, A., Mallikarjun, B. R., Zhan, F., Weyrich, T., … Theobalt,
    C. (2024). Lite2Relight: 3D-aware single image portrait relighting. In <i>Proceedings
    - SIGGRAPH 2024 Conference Papers</i>. Denver, CO, United States: Association
    for Computing Machinery. <a href="https://doi.org/10.1145/3641519.3657470">https://doi.org/10.1145/3641519.3657470</a>'
  chicago: 'Rao, Pramod, Gereon Fox, Abhimitra Meka, B. R. Mallikarjun, Fangneng Zhan,
    Tim Weyrich, Bernd Bickel, et al. “Lite2Relight: 3D-Aware Single Image Portrait
    Relighting.” In <i>Proceedings - SIGGRAPH 2024 Conference Papers</i>. Association
    for Computing Machinery, 2024. <a href="https://doi.org/10.1145/3641519.3657470">https://doi.org/10.1145/3641519.3657470</a>.'
  ieee: 'P. Rao <i>et al.</i>, “Lite2Relight: 3D-aware single image portrait relighting,”
    in <i>Proceedings - SIGGRAPH 2024 Conference Papers</i>, Denver, CO, United States,
    2024.'
  ista: 'Rao P, Fox G, Meka A, Mallikarjun BR, Zhan F, Weyrich T, Bickel B, Pfister
    H, Matusik W, Elgharib M, Theobalt C. 2024. Lite2Relight: 3D-aware single image
    portrait relighting. Proceedings - SIGGRAPH 2024 Conference Papers. SIGGRAPH:
    Computer Graphics and Interactive Techniques Conference, 41.'
  mla: 'Rao, Pramod, et al. “Lite2Relight: 3D-Aware Single Image Portrait Relighting.”
    <i>Proceedings - SIGGRAPH 2024 Conference Papers</i>, 41, Association for Computing
    Machinery, 2024, doi:<a href="https://doi.org/10.1145/3641519.3657470">10.1145/3641519.3657470</a>.'
  short: P. Rao, G. Fox, A. Meka, B.R. Mallikarjun, F. Zhan, T. Weyrich, B. Bickel,
    H. Pfister, W. Matusik, M. Elgharib, C. Theobalt, in:, Proceedings - SIGGRAPH
    2024 Conference Papers, Association for Computing Machinery, 2024.
conference:
  end_date: 2024-08-01
  location: Denver, CO, United States
  name: 'SIGGRAPH: Computer Graphics and Interactive Techniques Conference'
  start_date: 2024-07-27
date_created: 2024-08-04T22:01:21Z
date_published: 2024-07-13T00:00:00Z
date_updated: 2025-09-08T08:48:22Z
day: '13'
ddc:
- '000'
department:
- _id: BeBi
doi: 10.1145/3641519.3657470
external_id:
  arxiv:
  - '2407.10487'
  isi:
  - '001282218200076'
file:
- access_level: open_access
  checksum: 4650f6d1419e675929133e46a91ca177
  content_type: application/pdf
  creator: dernst
  date_created: 2024-08-05T08:25:18Z
  date_updated: 2024-08-05T08:25:18Z
  file_id: '17387'
  file_name: 2024_SIGGRAPH_Rao.pdf
  file_size: 59683257
  relation: main_file
  success: 1
file_date_updated: 2024-08-05T08:25:18Z
has_accepted_license: '1'
isi: 1
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
publication: Proceedings - SIGGRAPH 2024 Conference Papers
publication_identifier:
  isbn:
  - '9798400705250'
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Lite2Relight: 3D-aware single image portrait relighting'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
year: '2024'
...
---
_id: '17375'
abstract:
- lang: eng
  text: We consider the spectral radius of a large random matrix X with independent,
    identically distributed entries. We show that its typical size is given by a precise
    three-term asymptotics with an optimal error term beyond the radius of the celebrated
    circular law. The coefficients in this asymptotics are universal but they differ
    from a similar asymptotics recently proved for the rightmost eigenvalue of X in
    Cipolloni et al., Ann. Probab. 51(6), 2192–2242 (2023). To access the more complicated
    spectral radius, we need to establish a new decorrelation mechanism for the low-lying
    singular values of X − z for different complex shift parameters z using the Dyson
    Brownian Motion.
acknowledgement: L.E. and Y.X. were supported by the ERC Advanced Grant “RMTBeyond”
  Grant No. 101020331.
article_number: '063302'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Giorgio
  full_name: Cipolloni, Giorgio
  id: 42198EFA-F248-11E8-B48F-1D18A9856A87
  last_name: Cipolloni
  orcid: 0000-0002-4901-7992
- first_name: László
  full_name: Erdös, László
  id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
  last_name: Erdös
  orcid: 0000-0001-5366-9603
- first_name: Yuanyuan
  full_name: Xu, Yuanyuan
  id: 7902bdb1-a2a4-11eb-a164-c9216f71aea3
  last_name: Xu
  orcid: 0000-0003-1559-1205
citation:
  ama: Cipolloni G, Erdös L, Xu Y. Precise asymptotics for the spectral radius of
    a large random matrix. <i>Journal of Mathematical Physics</i>. 2024;65(6). doi:<a
    href="https://doi.org/10.1063/5.0209705">10.1063/5.0209705</a>
  apa: Cipolloni, G., Erdös, L., &#38; Xu, Y. (2024). Precise asymptotics for the
    spectral radius of a large random matrix. <i>Journal of Mathematical Physics</i>.
    AIP Publishing. <a href="https://doi.org/10.1063/5.0209705">https://doi.org/10.1063/5.0209705</a>
  chicago: Cipolloni, Giorgio, László Erdös, and Yuanyuan Xu. “Precise Asymptotics
    for the Spectral Radius of a Large Random Matrix.” <i>Journal of Mathematical
    Physics</i>. AIP Publishing, 2024. <a href="https://doi.org/10.1063/5.0209705">https://doi.org/10.1063/5.0209705</a>.
  ieee: G. Cipolloni, L. Erdös, and Y. Xu, “Precise asymptotics for the spectral radius
    of a large random matrix,” <i>Journal of Mathematical Physics</i>, vol. 65, no.
    6. AIP Publishing, 2024.
  ista: Cipolloni G, Erdös L, Xu Y. 2024. Precise asymptotics for the spectral radius
    of a large random matrix. Journal of Mathematical Physics. 65(6), 063302.
  mla: Cipolloni, Giorgio, et al. “Precise Asymptotics for the Spectral Radius of
    a Large Random Matrix.” <i>Journal of Mathematical Physics</i>, vol. 65, no. 6,
    063302, AIP Publishing, 2024, doi:<a href="https://doi.org/10.1063/5.0209705">10.1063/5.0209705</a>.
  short: G. Cipolloni, L. Erdös, Y. Xu, Journal of Mathematical Physics 65 (2024).
corr_author: '1'
date_created: 2024-08-04T22:01:22Z
date_published: 2024-06-01T00:00:00Z
date_updated: 2025-09-08T08:44:57Z
day: '01'
department:
- _id: LaEr
doi: 10.1063/5.0209705
ec_funded: 1
external_id:
  arxiv:
  - '2210.15643'
  isi:
  - '001252240700002'
intvolume: '        65'
isi: 1
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2210.15643
month: '06'
oa: 1
oa_version: Preprint
project:
- _id: 62796744-2b32-11ec-9570-940b20777f1d
  call_identifier: H2020
  grant_number: '101020331'
  name: Random matrices beyond Wigner-Dyson-Mehta
publication: Journal of Mathematical Physics
publication_identifier:
  issn:
  - 0022-2488
publication_status: published
publisher: AIP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Precise asymptotics for the spectral radius of a large random matrix
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 65
year: '2024'
...
---
OA_place: publisher
OA_type: hybrid
_id: '17376'
abstract:
- lang: eng
  text: "The inertia bound and ratio bound (also known as the Cvetković bound and
    Hoffman bound) are two fundamental inequalities in spectral graph theory, giving
    upper bounds on the independence number α(G) of a graph G in terms of spectral
    information about a weighted adjacency matrix of G. For both inequalities, given
    a graph G, one needs to make a judicious choice of weighted adjacency matrix to
    obtain as strong a bound as possible.\r\nWhile there is a well-established theory
    surrounding the ratio bound, the inertia bound is much more mysterious, and its
    limits are rather unclear. In fact, only recently did Sinkovic find the first
    example of a graph for which the inertia bound is not tight (for any weighted
    adjacency matrix), answering a longstanding question of Godsil. We show that the
    inertia bound can be extremely far from tight, and in fact can significantly underperform
    the ratio bound: for example, one of our results is that for infinitely many n,
    there is an n-vertex graph for which even the unweighted ratio bound can prove
    α(G)≤4n3/4, but the inertia bound is always at least n/4. In particular, these
    results address questions of Rooney, Sinkovic, and Wocjan--Elphick--Abiad."
acknowledgement: "The authors are grateful to Noga Alon, Anurag Bishnoi, Clive Elphick,
  and Ferdinand Ihringer for helpful comments and interesting discussions on earlier
  drafts of this paper. Matthew Kwan is supported by ERC Starting Grant “RANDSTRUCT”
  No. 101076777. Yuval Wigderson is supported by Dr. Max Rössler, the Walter Haefner
  Foundation, and the ETH Zürich Foundation.\r\nOpen access funding provided by Eidgenossische
  Technische Hochschule Zurich."
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Matthew Alan
  full_name: Kwan, Matthew Alan
  id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3
  last_name: Kwan
  orcid: 0000-0002-4003-7567
- first_name: Yuval
  full_name: Wigderson, Yuval
  last_name: Wigderson
citation:
  ama: Kwan MA, Wigderson Y. The inertia bound is far from tight. <i>Bulletin of the
    London Mathematical Society</i>. 2024;56(10):3196-3208. doi:<a href="https://doi.org/10.1112/blms.13127">10.1112/blms.13127</a>
  apa: Kwan, M. A., &#38; Wigderson, Y. (2024). The inertia bound is far from tight.
    <i>Bulletin of the London Mathematical Society</i>. London Mathematical Society.
    <a href="https://doi.org/10.1112/blms.13127">https://doi.org/10.1112/blms.13127</a>
  chicago: Kwan, Matthew Alan, and Yuval Wigderson. “The Inertia Bound Is Far from
    Tight.” <i>Bulletin of the London Mathematical Society</i>. London Mathematical
    Society, 2024. <a href="https://doi.org/10.1112/blms.13127">https://doi.org/10.1112/blms.13127</a>.
  ieee: M. A. Kwan and Y. Wigderson, “The inertia bound is far from tight,” <i>Bulletin
    of the London Mathematical Society</i>, vol. 56, no. 10. London Mathematical Society,
    pp. 3196–3208, 2024.
  ista: Kwan MA, Wigderson Y. 2024. The inertia bound is far from tight. Bulletin
    of the London Mathematical Society. 56(10), 3196–3208.
  mla: Kwan, Matthew Alan, and Yuval Wigderson. “The Inertia Bound Is Far from Tight.”
    <i>Bulletin of the London Mathematical Society</i>, vol. 56, no. 10, London Mathematical
    Society, 2024, pp. 3196–208, doi:<a href="https://doi.org/10.1112/blms.13127">10.1112/blms.13127</a>.
  short: M.A. Kwan, Y. Wigderson, Bulletin of the London Mathematical Society 56 (2024)
    3196–3208.
date_created: 2024-08-04T22:01:22Z
date_published: 2024-10-01T00:00:00Z
date_updated: 2025-09-08T08:45:39Z
day: '01'
ddc:
- '510'
department:
- _id: MaKw
doi: 10.1112/blms.13127
external_id:
  arxiv:
  - '2312.04925'
  isi:
  - '001279563300001'
file:
- access_level: open_access
  checksum: 7117f9819eaeb45eef1b0a226f9c2709
  content_type: application/pdf
  creator: dernst
  date_created: 2025-01-09T13:36:53Z
  date_updated: 2025-01-09T13:36:53Z
  file_id: '18814'
  file_name: 2024_BulletinLondonMathSoc_Kwan.pdf
  file_size: 175966
  relation: main_file
  success: 1
file_date_updated: 2025-01-09T13:36:53Z
has_accepted_license: '1'
intvolume: '        56'
isi: 1
issue: '10'
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
page: 3196-3208
project:
- _id: bd95085b-d553-11ed-ba76-e55d3349be45
  grant_number: '101076777'
  name: Randomness and structure in combinatorics
publication: Bulletin of the London Mathematical Society
publication_identifier:
  eissn:
  - 1469-2120
  issn:
  - 0024-6093
publication_status: published
publisher: London Mathematical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: The inertia bound is far from tight
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 56
year: '2024'
...
---
OA_place: repository
OA_type: green
_id: '17377'
abstract:
- lang: eng
  text: "Lateral root (LR) formation, that is vital for plant development, is one
    of many auxin-modulated processes, but the underlying regulatory mechanism is
    not yet fully known. Recently, \r\nGonzález-García et al. discovered the BiAux
    compound and showed that it is involved in LR development via regulating specific
    auxin coreceptors."
acknowledgement: "This work was supported by funding from the National Science Centre,
  Poland, under the OPUS call in the Weave program and the Austrian Science Fund,
  Austria project (FWF)/OPUS – Peptide receptor complexes for auxin canalization and
  regeneration in Arabidopsis (grant \r\n2021/43/I/NZ1/01835) to E.M., and grant I
  6123-B to J.F."
article_processing_charge: No
article_type: original
author:
- first_name: Barbara
  full_name: Wójcikowska, Barbara
  last_name: Wójcikowska
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Ewa
  full_name: Mazur, Ewa
  last_name: Mazur
citation:
  ama: Wójcikowska B, Friml J, Mazur E. BiAux, a newly discovered compound triggering
    auxin signaling. <i>Trends in Plant Science</i>. 2024;29(12):1279-1281. doi:<a
    href="https://doi.org/10.1016/j.tplants.2024.07.008">10.1016/j.tplants.2024.07.008</a>
  apa: Wójcikowska, B., Friml, J., &#38; Mazur, E. (2024). BiAux, a newly discovered
    compound triggering auxin signaling. <i>Trends in Plant Science</i>. Elsevier.
    <a href="https://doi.org/10.1016/j.tplants.2024.07.008">https://doi.org/10.1016/j.tplants.2024.07.008</a>
  chicago: Wójcikowska, Barbara, Jiří Friml, and Ewa Mazur. “BiAux, a Newly Discovered
    Compound Triggering Auxin Signaling.” <i>Trends in Plant Science</i>. Elsevier,
    2024. <a href="https://doi.org/10.1016/j.tplants.2024.07.008">https://doi.org/10.1016/j.tplants.2024.07.008</a>.
  ieee: B. Wójcikowska, J. Friml, and E. Mazur, “BiAux, a newly discovered compound
    triggering auxin signaling,” <i>Trends in Plant Science</i>, vol. 29, no. 12.
    Elsevier, pp. 1279–1281, 2024.
  ista: Wójcikowska B, Friml J, Mazur E. 2024. BiAux, a newly discovered compound
    triggering auxin signaling. Trends in Plant Science. 29(12), 1279–1281.
  mla: Wójcikowska, Barbara, et al. “BiAux, a Newly Discovered Compound Triggering
    Auxin Signaling.” <i>Trends in Plant Science</i>, vol. 29, no. 12, Elsevier, 2024,
    pp. 1279–81, doi:<a href="https://doi.org/10.1016/j.tplants.2024.07.008">10.1016/j.tplants.2024.07.008</a>.
  short: B. Wójcikowska, J. Friml, E. Mazur, Trends in Plant Science 29 (2024) 1279–1281.
corr_author: '1'
date_created: 2024-08-04T22:01:22Z
date_published: 2024-12-01T00:00:00Z
date_updated: 2025-11-24T15:13:16Z
day: '01'
ddc:
- '580'
department:
- _id: JiFr
doi: 10.1016/j.tplants.2024.07.008
external_id:
  isi:
  - '001375335200001'
  pmid:
  - '39079770'
file:
- access_level: open_access
  checksum: 89a83fe25b9ec1aad8e22d134a342c09
  content_type: application/pdf
  creator: dernst
  date_created: 2025-11-24T15:12:50Z
  date_updated: 2025-11-24T15:12:50Z
  file_id: '20691'
  file_name: 2024_TrendsPlantScience_Wojcikowska_submittedversion.pdf
  file_size: 277636
  relation: main_file
  success: 1
file_date_updated: 2025-11-24T15:12:50Z
has_accepted_license: '1'
intvolume: '        29'
isi: 1
issue: '12'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Submitted Version
page: 1279-1281
pmid: 1
project:
- _id: bd76d395-d553-11ed-ba76-f678c14f9033
  grant_number: I06123
  name: Peptide receptors for auxin canalization in Arabidopsis
publication: Trends in Plant Science
publication_identifier:
  issn:
  - 1360-1385
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: BiAux, a newly discovered compound triggering auxin signaling
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 29
year: '2024'
...
---
_id: '17389'
abstract:
- lang: eng
  text: The potential of Si and SiGe-based devices for the scaling of quantum circuits
    is tainted by device variability. Each device needs to be tuned to operation conditions
    and each device realisation requires a different tuning protocol. We demonstrate
    that it is possible to automate the tuning of a 4-gate Si FinFET, a 5-gate GeSi
    nanowire and a 7-gate Ge/SiGe heterostructure double quantum dot device from scratch
    with the same algorithm. We achieve tuning times of 30, 10, and 92 min, respectively.
    The algorithm also provides insight into the parameter space landscape for each
    of these devices, allowing for the characterization of the regions where double
    quantum dot regimes are found. These results show that overarching solutions for
    the tuning of quantum devices are enabled by machine learning.
acknowledged_ssus:
- _id: NanoFab
acknowledgement: We acknowledge Ang Li, Erik P. A. M. Bakkers (University of Eindhoven)
  for the fabrication of the Ge/Si nanowire. This work was supported by the Royal
  Society, the EPSRC National Quantum Technology Hub in Networked Quantum Information
  Technology (EP/M013243/1), Quantum Technology Capital (EP/N014995/1), EPSRC Platform
  Grant (EP/R029229/1), the European Research Council (Grant agreement 948932), the
  Swiss Nanoscience Institute, the NCCR SPIN, the EU H2020 European Microkelvin Platform
  EMP grant No. 824109, the Scientific Service Units of IST Austria through resources
  provided by the nanofabrication facility, the FWF-I 05060 and the FWF-P 30207 project.
article_number: '17281'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: B.
  full_name: Severin, B.
  last_name: Severin
- first_name: D. T.
  full_name: Lennon, D. T.
  last_name: Lennon
- first_name: L. C.
  full_name: Camenzind, L. C.
  last_name: Camenzind
- first_name: F.
  full_name: Vigneau, F.
  last_name: Vigneau
- first_name: F.
  full_name: Fedele, F.
  last_name: Fedele
- first_name: Daniel
  full_name: Jirovec, Daniel
  id: 4C473F58-F248-11E8-B48F-1D18A9856A87
  last_name: Jirovec
  orcid: 0000-0002-7197-4801
- first_name: A.
  full_name: Ballabio, A.
  last_name: Ballabio
- first_name: D.
  full_name: Chrastina, D.
  last_name: Chrastina
- first_name: G.
  full_name: Isella, G.
  last_name: Isella
- first_name: M.
  full_name: de Kruijf, M.
  last_name: de Kruijf
- first_name: M. J.
  full_name: Carballido, M. J.
  last_name: Carballido
- first_name: S.
  full_name: Svab, S.
  last_name: Svab
- first_name: A. V.
  full_name: Kuhlmann, A. V.
  last_name: Kuhlmann
- first_name: S.
  full_name: Geyer, S.
  last_name: Geyer
- first_name: F. N. M.
  full_name: Froning, F. N. M.
  last_name: Froning
- first_name: H.
  full_name: Moon, H.
  last_name: Moon
- first_name: M. A.
  full_name: Osborne, M. A.
  last_name: Osborne
- first_name: D.
  full_name: Sejdinovic, D.
  last_name: Sejdinovic
- first_name: Georgios
  full_name: Katsaros, Georgios
  id: 38DB5788-F248-11E8-B48F-1D18A9856A87
  last_name: Katsaros
  orcid: 0000-0001-8342-202X
- first_name: D. M.
  full_name: Zumbühl, D. M.
  last_name: Zumbühl
- first_name: G. A. D.
  full_name: Briggs, G. A. D.
  last_name: Briggs
- first_name: N.
  full_name: Ares, N.
  last_name: Ares
citation:
  ama: Severin B, Lennon DT, Camenzind LC, et al. Cross-architecture tuning of silicon
    and SiGe-based quantum devices using machine learning. <i>Scientific Reports</i>.
    2024;14. doi:<a href="https://doi.org/10.1038/s41598-024-67787-z">10.1038/s41598-024-67787-z</a>
  apa: Severin, B., Lennon, D. T., Camenzind, L. C., Vigneau, F., Fedele, F., Jirovec,
    D., … Ares, N. (2024). Cross-architecture tuning of silicon and SiGe-based quantum
    devices using machine learning. <i>Scientific Reports</i>. Springer Nature. <a
    href="https://doi.org/10.1038/s41598-024-67787-z">https://doi.org/10.1038/s41598-024-67787-z</a>
  chicago: Severin, B., D. T. Lennon, L. C. Camenzind, F. Vigneau, F. Fedele, Daniel
    Jirovec, A. Ballabio, et al. “Cross-Architecture Tuning of Silicon and SiGe-Based
    Quantum Devices Using Machine Learning.” <i>Scientific Reports</i>. Springer Nature,
    2024. <a href="https://doi.org/10.1038/s41598-024-67787-z">https://doi.org/10.1038/s41598-024-67787-z</a>.
  ieee: B. Severin <i>et al.</i>, “Cross-architecture tuning of silicon and SiGe-based
    quantum devices using machine learning,” <i>Scientific Reports</i>, vol. 14. Springer
    Nature, 2024.
  ista: Severin B, Lennon DT, Camenzind LC, Vigneau F, Fedele F, Jirovec D, Ballabio
    A, Chrastina D, Isella G, de Kruijf M, Carballido MJ, Svab S, Kuhlmann AV, Geyer
    S, Froning FNM, Moon H, Osborne MA, Sejdinovic D, Katsaros G, Zumbühl DM, Briggs
    GAD, Ares N. 2024. Cross-architecture tuning of silicon and SiGe-based quantum
    devices using machine learning. Scientific Reports. 14, 17281.
  mla: Severin, B., et al. “Cross-Architecture Tuning of Silicon and SiGe-Based Quantum
    Devices Using Machine Learning.” <i>Scientific Reports</i>, vol. 14, 17281, Springer
    Nature, 2024, doi:<a href="https://doi.org/10.1038/s41598-024-67787-z">10.1038/s41598-024-67787-z</a>.
  short: B. Severin, D.T. Lennon, L.C. Camenzind, F. Vigneau, F. Fedele, D. Jirovec,
    A. Ballabio, D. Chrastina, G. Isella, M. de Kruijf, M.J. Carballido, S. Svab,
    A.V. Kuhlmann, S. Geyer, F.N.M. Froning, H. Moon, M.A. Osborne, D. Sejdinovic,
    G. Katsaros, D.M. Zumbühl, G.A.D. Briggs, N. Ares, Scientific Reports 14 (2024).
date_created: 2024-08-05T08:50:51Z
date_published: 2024-07-27T00:00:00Z
date_updated: 2025-09-08T08:49:16Z
day: '27'
ddc:
- '530'
department:
- _id: GeKa
doi: 10.1038/s41598-024-67787-z
external_id:
  arxiv:
  - '2107.12975'
  isi:
  - '001281273100062'
  pmid:
  - '39068242'
file:
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  date_updated: 2024-08-05T08:52:14Z
  file_id: '17390'
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file_date_updated: 2024-08-05T08:52:14Z
has_accepted_license: '1'
intvolume: '        14'
isi: 1
language:
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month: '07'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: c0977eea-5a5b-11eb-8a69-a862db0cf4d1
  grant_number: I05060
  name: High impedance circuit quantum electrodynamics with hole spins
- _id: 2641CE5E-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P30207
  name: Hole spin orbit qubits in Ge quantum wells
publication: Scientific Reports
publication_identifier:
  issn:
  - 2045-2322
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  record:
  - id: '10066'
    relation: earlier_version
    status: public
scopus_import: '1'
status: public
title: Cross-architecture tuning of silicon and SiGe-based quantum devices using machine
  learning
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 14
year: '2024'
...
---
_id: '17396'
abstract:
- lang: eng
  text: Wildfire intensity and severity have been increasing in the Iberian Peninsula
    in recent years, particularly in the Galicia region, due to rising temperatures
    and accumulating drier combustible vegetation in unmanaged lands. This leads to
    substantial emissions of air pollutants, notably fine particles (PM2.5), posing
    a risk to public health. This study aims to assess the impact of local and regional
    wildfires on PM2.5 levels in Galicia's main cities and their implications for
    air quality and public health. Over a decade (2013–2022), PM2.5 data during wildfire
    seasons were analyzed using statistical methods and Lagrangian tracking to monitor
    smoke plume evolution. The results reveal a notable increase in PM2.5 concentration
    during the wildfire season (June–November) in Galicia, surpassing health guidelines
    during extreme events and posing a significant health risk to the population.
    Regional wildfire analyses indicate that smoke plumes from Northern Portugal contribute
    to pollution in Galician cities, influencing the seasonality of heightened PM2.5
    levels. During extensive wildfires, elevated PM2.5 concentration values persisted
    for several days, potentially exacerbating health concerns in Galicia. These findings
    underscore the urgency of implementing air pollution prevention and management
    measures in the region, including developing effective alerts for large-scale
    events and improved wildfire management strategies to mitigate their impact on
    air quality in Galician cities.
acknowledgement: 'Alejandro Casallas was partially funded by a fellowship from the
  Abdus Salam International Centre for Theoretical Physics – ICTP. This project has
  received funding from the European Union’s Horizon 2020 research and innovation
  programme under the Marie Skłodowska-Curie grant agreement No 101034413 awarded
  to Alejandro Casallas. '
article_number: '122093'
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: César
  full_name: Quishpe-Vásquez, César
  last_name: Quishpe-Vásquez
- first_name: Patricia
  full_name: Oliva, Patricia
  last_name: Oliva
- first_name: Ellie Anne
  full_name: López-Barrera, Ellie Anne
  last_name: López-Barrera
- first_name: Alejandro
  full_name: Casallas Garcia, Alejandro
  id: 92081129-2d75-11ef-a48d-b04dd7a2385a
  last_name: Casallas Garcia
  orcid: 0000-0002-1988-5035
citation:
  ama: Quishpe-Vásquez C, Oliva P, López-Barrera EA, Casallas Garcia A. Wildfires
    impact on PM2.5 concentration in galicia Spain. <i>Journal of Environmental Management</i>.
    2024;367. doi:<a href="https://doi.org/10.1016/j.jenvman.2024.122093">10.1016/j.jenvman.2024.122093</a>
  apa: Quishpe-Vásquez, C., Oliva, P., López-Barrera, E. A., &#38; Casallas Garcia,
    A. (2024). Wildfires impact on PM2.5 concentration in galicia Spain. <i>Journal
    of Environmental Management</i>. Elsevier. <a href="https://doi.org/10.1016/j.jenvman.2024.122093">https://doi.org/10.1016/j.jenvman.2024.122093</a>
  chicago: Quishpe-Vásquez, César, Patricia Oliva, Ellie Anne López-Barrera, and Alejandro
    Casallas Garcia. “Wildfires Impact on PM2.5 Concentration in Galicia Spain.” <i>Journal
    of Environmental Management</i>. Elsevier, 2024. <a href="https://doi.org/10.1016/j.jenvman.2024.122093">https://doi.org/10.1016/j.jenvman.2024.122093</a>.
  ieee: C. Quishpe-Vásquez, P. Oliva, E. A. López-Barrera, and A. Casallas Garcia,
    “Wildfires impact on PM2.5 concentration in galicia Spain,” <i>Journal of Environmental
    Management</i>, vol. 367. Elsevier, 2024.
  ista: Quishpe-Vásquez C, Oliva P, López-Barrera EA, Casallas Garcia A. 2024. Wildfires
    impact on PM2.5 concentration in galicia Spain. Journal of Environmental Management.
    367, 122093.
  mla: Quishpe-Vásquez, César, et al. “Wildfires Impact on PM2.5 Concentration in
    Galicia Spain.” <i>Journal of Environmental Management</i>, vol. 367, 122093,
    Elsevier, 2024, doi:<a href="https://doi.org/10.1016/j.jenvman.2024.122093">10.1016/j.jenvman.2024.122093</a>.
  short: C. Quishpe-Vásquez, P. Oliva, E.A. López-Barrera, A. Casallas Garcia, Journal
    of Environmental Management 367 (2024).
date_created: 2024-08-06T05:54:52Z
date_published: 2024-09-01T00:00:00Z
date_updated: 2025-09-08T08:53:10Z
day: '01'
ddc:
- '550'
department:
- _id: CaMu
doi: 10.1016/j.jenvman.2024.122093
ec_funded: 1
external_id:
  isi:
  - '001289532100001'
  pmid:
  - '39106804'
file:
- access_level: open_access
  checksum: 6fa476a4c08aded413844d92336b0e52
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  date_created: 2024-08-09T13:37:23Z
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  file_id: '17406'
  file_name: Fires_Galicia.pdf
  file_size: 13662676
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file_date_updated: 2024-08-09T13:37:24Z
has_accepted_license: '1'
intvolume: '       367'
isi: 1
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: Journal of Environmental Management
publication_identifier:
  issn:
  - 0301-4797
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Wildfires impact on PM2.5 concentration in galicia Spain
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 367
year: '2024'
...
---
_id: '17402'
abstract:
- lang: eng
  text: We present version 2.0 of the Partial Exploration Tool (PET), a tool for verification
    of probabilistic systems. We extend the previous version by adding support for
    stochastic games, based on a recent unified framework for sound value iteration
    algorithms. Thereby, PET2 is the first tool implementing a sound and efficient
    approach for solving stochastic games with objectives of the type reachability/safety
    and mean payoff. We complement this approach by developing and implementing a
    partial-exploration based variant for all three objectives. Our experimental evaluation
    shows that PET2 offers the most efficient partial-exploration based algorithm
    and is the most viable tool on SGs, even outperforming unsound tools.
acknowledgement: M. Weininger has received funding from the EU’s Horizon 2020 research
  and innovation programme under the Marie Skłodowska-Curie grant agreement No. 101034413.
alternative_title:
- LNCS
article_processing_charge: Yes (in subscription journal)
arxiv: 1
author:
- first_name: Tobias
  full_name: Meggendorfer, Tobias
  id: b21b0c15-30a2-11eb-80dc-f13ca25802e1
  last_name: Meggendorfer
  orcid: 0000-0002-1712-2165
- first_name: Maximilian
  full_name: Weininger, Maximilian
  id: 02ab0197-cc70-11ed-ab61-918e71f56881
  last_name: Weininger
citation:
  ama: 'Meggendorfer T, Weininger M. Playing games with your PET: Extending the Partial
    Exploration Tool to stochastic games. In: <i>36th International Conference on
    Computer Aided Verification</i>. Vol 14683. Springer Nature; 2024:359-372. doi:<a
    href="https://doi.org/10.1007/978-3-031-65633-0_16">10.1007/978-3-031-65633-0_16</a>'
  apa: 'Meggendorfer, T., &#38; Weininger, M. (2024). Playing games with your PET:
    Extending the Partial Exploration Tool to stochastic games. In <i>36th International
    Conference on Computer Aided Verification</i> (Vol. 14683, pp. 359–372). Montreal,
    Canada: Springer Nature. <a href="https://doi.org/10.1007/978-3-031-65633-0_16">https://doi.org/10.1007/978-3-031-65633-0_16</a>'
  chicago: 'Meggendorfer, Tobias, and Maximilian Weininger. “Playing Games with Your
    PET: Extending the Partial Exploration Tool to Stochastic Games.” In <i>36th International
    Conference on Computer Aided Verification</i>, 14683:359–72. Springer Nature,
    2024. <a href="https://doi.org/10.1007/978-3-031-65633-0_16">https://doi.org/10.1007/978-3-031-65633-0_16</a>.'
  ieee: 'T. Meggendorfer and M. Weininger, “Playing games with your PET: Extending
    the Partial Exploration Tool to stochastic games,” in <i>36th International Conference
    on Computer Aided Verification</i>, Montreal, Canada, 2024, vol. 14683, pp. 359–372.'
  ista: 'Meggendorfer T, Weininger M. 2024. Playing games with your PET: Extending
    the Partial Exploration Tool to stochastic games. 36th International Conference
    on Computer Aided Verification. CAV: Computer Aided Verification, LNCS, vol. 14683,
    359–372.'
  mla: 'Meggendorfer, Tobias, and Maximilian Weininger. “Playing Games with Your PET:
    Extending the Partial Exploration Tool to Stochastic Games.” <i>36th International
    Conference on Computer Aided Verification</i>, vol. 14683, Springer Nature, 2024,
    pp. 359–72, doi:<a href="https://doi.org/10.1007/978-3-031-65633-0_16">10.1007/978-3-031-65633-0_16</a>.'
  short: T. Meggendorfer, M. Weininger, in:, 36th International Conference on Computer
    Aided Verification, Springer Nature, 2024, pp. 359–372.
conference:
  end_date: 2024-07-27
  location: Montreal, Canada
  name: 'CAV: Computer Aided Verification'
  start_date: 2024-07-24
corr_author: '1'
date_created: 2024-08-09T11:24:54Z
date_published: 2024-07-01T00:00:00Z
date_updated: 2025-09-08T08:53:55Z
day: '01'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.1007/978-3-031-65633-0_16
ec_funded: 1
external_id:
  arxiv:
  - '2405.03885'
  isi:
  - '001307897000016'
file:
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  checksum: c888231d0a47b55786b7b4c0f02216bb
  content_type: application/pdf
  creator: dernst
  date_created: 2024-08-12T08:39:12Z
  date_updated: 2024-08-12T08:39:12Z
  file_id: '17419'
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file_date_updated: 2024-08-12T08:39:12Z
has_accepted_license: '1'
intvolume: '     14683'
isi: 1
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 359-372
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: 36th International Conference on Computer Aided Verification
publication_identifier:
  eisbn:
  - '9783031656330'
  eissn:
  - 1611-3349
  isbn:
  - '9783031656323'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Playing games with your PET: Extending the Partial Exploration Tool to stochastic
  games'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 14683
year: '2024'
...
---
APC_amount: 3534 EUR
OA_place: publisher
OA_type: gold
_id: '17407'
abstract:
- lang: eng
  text: The ability to control forces between sub-micron-scale building blocks offers
    significant potential for designing new materials through self-assembly. Traditionally,
    this involves identifying a crystal structure with a desired property and then
    designing building-block interactions so that it assembles spontaneously. However,
    this paradigm fails for structurally disordered solids, which lack a well-defined
    structure. Here, we show that disordered solids can still be treated from an inverse
    self-assembly perspective by bypassing structure and directly targeting material
    properties. Using the Poisson’s ratio as a primary example, we demonstrate how
    differentiable programming links interaction parameters with emergent behavior,
    enabling iterative training to achieve the desired Poisson’s ratio. We also tune
    other properties, including pressure and local 8-fold structural order, and can
    even control multiple properties simultaneously. This robust, transferable, and
    scalable approach can handle a wide variety of systems and properties, demonstrating
    the utility of disordered solids as a practical avenue for self-assembly platforms.
acknowledgement: We thank M. Lechner for helpful discussions.
article_number: '141'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Mengjie
  full_name: Zu, Mengjie
  id: 26dd9e7c-e86a-11eb-a854-82ac731c9ae2
  last_name: Zu
- first_name: Carl Peter
  full_name: Goodrich, Carl Peter
  id: EB352CD2-F68A-11E9-89C5-A432E6697425
  last_name: Goodrich
  orcid: 0000-0002-1307-5074
citation:
  ama: Zu M, Goodrich CP. Designing athermal disordered solids with automatic differentiation.
    <i>Communications Materials</i>. 2024;5. doi:<a href="https://doi.org/10.1038/s43246-024-00583-4">10.1038/s43246-024-00583-4</a>
  apa: Zu, M., &#38; Goodrich, C. P. (2024). Designing athermal disordered solids
    with automatic differentiation. <i>Communications Materials</i>. Springer Nature.
    <a href="https://doi.org/10.1038/s43246-024-00583-4">https://doi.org/10.1038/s43246-024-00583-4</a>
  chicago: Zu, Mengjie, and Carl Peter Goodrich. “Designing Athermal Disordered Solids
    with Automatic Differentiation.” <i>Communications Materials</i>. Springer Nature,
    2024. <a href="https://doi.org/10.1038/s43246-024-00583-4">https://doi.org/10.1038/s43246-024-00583-4</a>.
  ieee: M. Zu and C. P. Goodrich, “Designing athermal disordered solids with automatic
    differentiation,” <i>Communications Materials</i>, vol. 5. Springer Nature, 2024.
  ista: Zu M, Goodrich CP. 2024. Designing athermal disordered solids with automatic
    differentiation. Communications Materials. 5, 141.
  mla: Zu, Mengjie, and Carl Peter Goodrich. “Designing Athermal Disordered Solids
    with Automatic Differentiation.” <i>Communications Materials</i>, vol. 5, 141,
    Springer Nature, 2024, doi:<a href="https://doi.org/10.1038/s43246-024-00583-4">10.1038/s43246-024-00583-4</a>.
  short: M. Zu, C.P. Goodrich, Communications Materials 5 (2024).
corr_author: '1'
date_created: 2024-08-11T22:01:11Z
date_published: 2024-08-01T00:00:00Z
date_updated: 2025-05-08T09:45:35Z
day: '01'
ddc:
- '530'
department:
- _id: CaGo
doi: 10.1038/s43246-024-00583-4
external_id:
  arxiv:
  - '2404.15101'
file:
- access_level: open_access
  checksum: d6f74e242db5f46bb0e380ee23a268af
  content_type: application/pdf
  creator: dernst
  date_created: 2024-08-12T07:56:38Z
  date_updated: 2024-08-12T07:56:38Z
  file_id: '17416'
  file_name: 2024_CommMaterials_Zu.pdf
  file_size: 9824134
  relation: main_file
  success: 1
file_date_updated: 2024-08-12T07:56:38Z
has_accepted_license: '1'
intvolume: '         5'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
project:
- _id: B67AFEDC-15C9-11EA-A837-991A96BB2854
  name: IST Austria Open Access Fund
publication: Communications Materials
publication_identifier:
  eissn:
  - 2662-4443
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Designing athermal disordered solids with automatic differentiation
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 5
year: '2024'
...
