--- APC_amount: 2748 EUR OA_place: publisher OA_type: hybrid _id: '17634' abstract: - lang: eng text: System behaviors are traditionally evaluated through binary classifications of correctness, which do not suffice for properties involving quantitative aspects of systems and executions. Quantitative automata offer a more nuanced approach, mapping each execution to a real number by incorporating weighted transitions and value functions generalizing acceptance conditions. In this paper, we introduce QuAK, the first tool designed to automate the analysis of quantitative automata. QuAK currently supports a variety of quantitative automaton types, including Inf, Sup, LimInf, LimSup, LimInfAvg, and LimSupAvg automata, and implements decision procedures for problems such as emptiness, universality, inclusion, equivalence, as well as for checking whether an automaton is safe, live, or constant. Additionally, QuAK is able to compute extremal values when possible, construct safety-liveness decompositions, and monitor system behaviors. We demonstrate the effectiveness of QuAK through experiments focusing on the inclusion, constant-function check, and monitoring problems. acknowledgement: This work was supported in part by the ERC-2020-AdG 101020093. N. Mazzocchi was affiliated with ISTA when his collaboration started. alternative_title: - LNCS article_processing_charge: Yes (in subscription journal) arxiv: 1 author: - first_name: Marek full_name: Chalupa, Marek id: 87e34708-d6c6-11ec-9f5b-9391e7be2463 last_name: Chalupa - first_name: Thomas A full_name: Henzinger, Thomas A id: 40876CD8-F248-11E8-B48F-1D18A9856A87 last_name: Henzinger orcid: 0000-0002-2985-7724 - first_name: Nicolas Adrien full_name: Mazzocchi, Nicolas Adrien id: b26baa86-3308-11ec-87b0-8990f34baa85 last_name: Mazzocchi - first_name: Naci E full_name: Sarac, Naci E id: 8C6B42F8-C8E6-11E9-A03A-F2DCE5697425 last_name: Sarac citation: ama: 'Chalupa M, Henzinger TA, Mazzocchi NA, Sarac NE. QuAK: Quantitative Automata Kit. In: 12th International Symposium on Leveraging Applications of Formal Methods, Verification and Validation. Vol 15222. Springer Nature; 2024:3-20. doi:10.1007/978-3-031-75387-9_1' apa: 'Chalupa, M., Henzinger, T. A., Mazzocchi, N. A., & Sarac, N. E. (2024). QuAK: Quantitative Automata Kit. In 12th International Symposium on Leveraging Applications of Formal Methods, Verification and Validation (Vol. 15222, pp. 3–20). Crete, Greece: Springer Nature. https://doi.org/10.1007/978-3-031-75387-9_1' chicago: 'Chalupa, Marek, Thomas A Henzinger, Nicolas Adrien Mazzocchi, and Naci E Sarac. “QuAK: Quantitative Automata Kit.” In 12th International Symposium on Leveraging Applications of Formal Methods, Verification and Validation, 15222:3–20. Springer Nature, 2024. https://doi.org/10.1007/978-3-031-75387-9_1.' ieee: 'M. Chalupa, T. A. Henzinger, N. A. Mazzocchi, and N. E. Sarac, “QuAK: Quantitative Automata Kit,” in 12th International Symposium on Leveraging Applications of Formal Methods, Verification and Validation, Crete, Greece, 2024, vol. 15222, pp. 3–20.' ista: 'Chalupa M, Henzinger TA, Mazzocchi NA, Sarac NE. 2024. QuAK: Quantitative Automata Kit. 12th International Symposium on Leveraging Applications of Formal Methods, Verification and Validation. ISoLA: International Symposium on Leveraging Applications, LNCS, vol. 15222, 3–20.' mla: 'Chalupa, Marek, et al. “QuAK: Quantitative Automata Kit.” 12th International Symposium on Leveraging Applications of Formal Methods, Verification and Validation, vol. 15222, Springer Nature, 2024, pp. 3–20, doi:10.1007/978-3-031-75387-9_1.' short: M. Chalupa, T.A. Henzinger, N.A. Mazzocchi, N.E. Sarac, in:, 12th International Symposium on Leveraging Applications of Formal Methods, Verification and Validation, Springer Nature, 2024, pp. 3–20. conference: end_date: 2024-10-31 location: Crete, Greece name: 'ISoLA: International Symposium on Leveraging Applications' start_date: 2024-10-27 corr_author: '1' date_created: 2024-09-05T14:27:08Z date_published: 2024-10-26T00:00:00Z date_updated: 2026-07-27T12:48:18Z day: '26' ddc: - '000' department: - _id: GradSch - _id: ToHe doi: 10.1007/978-3-031-75387-9_1 ec_funded: 1 external_id: arxiv: - '2409.03569' isi: - '001419008700001' file: - access_level: open_access checksum: 43e432f82be376434b358f3dd7a94b71 content_type: application/pdf creator: esarac date_created: 2024-09-05T14:26:02Z date_updated: 2024-09-05T14:26:02Z file_id: '17635' file_name: isola24.pdf file_size: 847422 relation: main_file success: 1 - access_level: open_access checksum: 6bc04f07bb5612c0e7ea00ac121a69b6 content_type: application/pdf creator: dernst date_created: 2025-01-21T14:39:49Z date_updated: 2025-01-21T14:39:49Z file_id: '18865' file_name: 2024_LNCS_Chalupa.pdf file_size: 1358706 relation: main_file success: 1 file_date_updated: 2025-01-21T14:39:49Z has_accepted_license: '1' intvolume: ' 15222' isi: 1 language: - iso: eng license: https://creativecommons.org/licenses/by/4.0/ month: '10' oa: 1 oa_version: Published Version page: 3-20 project: - _id: 62781420-2b32-11ec-9570-8d9b63373d4d call_identifier: H2020 grant_number: '101020093' name: Vigilant Algorithmic Monitoring of Software publication: 12th International Symposium on Leveraging Applications of Formal Methods, Verification and Validation publication_identifier: eissn: - 1611-3349 isbn: - '9783031753862' issn: - 0302-9743 publication_status: published publisher: Springer Nature quality_controlled: '1' related_material: record: - id: '20147' relation: dissertation_contains status: public scopus_import: '1' status: public title: 'QuAK: Quantitative Automata Kit' tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: conference user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 15222 year: '2024' ... --- _id: '18121' abstract: - lang: eng text: It is known that sparsity can improve interpretability for deep neural networks. However, existing methods in the area either require networks that are pre-trained with sparsity constraints, or impose sparsity after the fact, altering the network’s general behavior. In this paper, we demonstrate, for the first time, that sparsity can instead be incorporated into the interpretation process itself, as a sample-specific preprocessing step. Unlike previous work, this approach, which we call SPADE, does not place constraints on the trained model and does not affect its behavior during inference on the sample. Given a trained model and a target sample, SPADE uses sample-targeted pruning to provide a "trace" of the network’s execution on the sample, reducing the network to the most important connections prior to computing an interpretation. We demonstrate that preprocessing with SPADE significantly increases the accuracy of image saliency maps across several interpretability methods. Additionally, SPADE improves the usefulness of neuron visualizations, aiding humans in reasoning about network behavior. Our code is available at https://github.com/IST-DASLab/SPADE. acknowledged_ssus: - _id: ScienComp acknowledgement: The authors would like to thank Stephen Casper and Tony Wang for their feedback on this work, and Eldar Kurtic for his advice on aspects of the project. This research was supported by the Scientific Service Units (SSU) of IST Austria through resources provided by Scientific Computing (SciComp). EI was supported in part by the FWF DK VGSCO, grant agreement number W1260-N35. alternative_title: - PMLR article_processing_charge: No arxiv: 1 author: - first_name: Arshia Soltani full_name: Moakhar, Arshia Soltani last_name: Moakhar - first_name: Eugenia B full_name: Iofinova, Eugenia B id: f9a17499-f6e0-11ea-865d-fdf9a3f77117 last_name: Iofinova orcid: 0000-0002-7778-3221 - first_name: Elias full_name: Frantar, Elias id: 09a8f98d-ec99-11ea-ae11-c063a7b7fe5f last_name: Frantar - first_name: Dan-Adrian full_name: Alistarh, Dan-Adrian id: 4A899BFC-F248-11E8-B48F-1D18A9856A87 last_name: Alistarh orcid: 0000-0003-3650-940X citation: ama: 'Moakhar AS, Iofinova EB, Frantar E, Alistarh D-A. SPADE: Sparsity-guided debugging for deep neural networks. In: Proceedings of the 41st International Conference on Machine Learning. Vol 235. ML Research Press; 2024:45955-45987.' apa: 'Moakhar, A. S., Iofinova, E. B., Frantar, E., & Alistarh, D.-A. (2024). SPADE: Sparsity-guided debugging for deep neural networks. In Proceedings of the 41st International Conference on Machine Learning (Vol. 235, pp. 45955–45987). Vienna, Austria: ML Research Press.' chicago: 'Moakhar, Arshia Soltani, Eugenia B Iofinova, Elias Frantar, and Dan-Adrian Alistarh. “SPADE: Sparsity-Guided Debugging for Deep Neural Networks.” In Proceedings of the 41st International Conference on Machine Learning, 235:45955–87. ML Research Press, 2024.' ieee: 'A. S. Moakhar, E. B. Iofinova, E. Frantar, and D.-A. Alistarh, “SPADE: Sparsity-guided debugging for deep neural networks,” in Proceedings of the 41st International Conference on Machine Learning, Vienna, Austria, 2024, vol. 235, pp. 45955–45987.' ista: 'Moakhar AS, Iofinova EB, Frantar E, Alistarh D-A. 2024. SPADE: Sparsity-guided debugging for deep neural networks. Proceedings of the 41st International Conference on Machine Learning. ICML: International Conference on Machine Learning, PMLR, vol. 235, 45955–45987.' mla: 'Moakhar, Arshia Soltani, et al. “SPADE: Sparsity-Guided Debugging for Deep Neural Networks.” Proceedings of the 41st International Conference on Machine Learning, vol. 235, ML Research Press, 2024, pp. 45955–87.' short: A.S. Moakhar, E.B. Iofinova, E. Frantar, D.-A. Alistarh, in:, Proceedings of the 41st International Conference on Machine Learning, ML Research Press, 2024, pp. 45955–45987. conference: end_date: 2024-07-27 location: Vienna, Austria name: 'ICML: International Conference on Machine Learning' start_date: 2024-07-21 corr_author: '1' date_created: 2024-09-22T22:01:46Z date_published: 2024-09-01T00:00:00Z date_updated: 2026-07-27T12:50:03Z day: '01' department: - _id: DaAl external_id: arxiv: - '2310.04519' intvolume: ' 235' language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.48550/arXiv.2310.04519 month: '09' oa: 1 oa_version: Preprint page: 45955-45987 project: - _id: 9B9290DE-BA93-11EA-9121-9846C619BF3A grant_number: W1260-N35 name: Vienna Graduate School on Computational Optimization publication: Proceedings of the 41st International Conference on Machine Learning publication_identifier: eissn: - 2640-3498 publication_status: published publisher: ML Research Press quality_controlled: '1' related_material: link: - relation: software url: https://github.com/IST-DASLab/SPADE record: - id: '21854' relation: dissertation_contains status: public scopus_import: '1' status: public title: 'SPADE: Sparsity-guided debugging for deep neural networks' type: conference user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 235 year: '2024' ... --- APC_amount: 3149,96 EUR DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '15297' abstract: - lang: eng text: Populations evolve by accumulating advantageous mutations. Every population has some spatial structure that can be modeled by an underlying network. The network then influences the probability that new advantageous mutations fixate. Amplifiers of selection are networks that increase the fixation probability of advantageous mutants, as compared to the unstructured fully-connected network. Whether or not a network is an amplifier depends on the choice of the random process that governs the evolutionary dynamics. Two popular choices are Moran process with Birth-death updating and Moran process with death-Birth updating. Interestingly, while some networks are amplifiers under Birth-death updating and other networks are amplifiers under death-Birth updating, so far no spatial structures have been found that function as an amplifier under both types of updating simultaneously. In this work, we identify networks that act as amplifiers of selection under both versions of the Moran process. The amplifiers are robust, modular, and increase fixation probability for any mutant fitness advantage in a range r ∈ (1, 1.2). To complement this positive result, we also prove that for certain quantities closely related to fixation probability, it is impossible to improve them simultaneously for both versions of the Moran process. Together, our results highlight how the two versions of the Moran process differ and what they have in common. acknowledgement: "We thank Gavin Rees for helpful discussions. J.S., S.J., and K.C were supported by\r\nEuropean Research Council (ERC) CoG 863818 (ForM-SMArt). J.T was supported by Center for Foundations of Modern Computer Science (Charles University project UNCE/SCI/004) and by the project PRIMUS/24/SCI/012 from Charles University. " article_number: e1012008 article_processing_charge: Yes article_type: original arxiv: 1 author: - first_name: Jakub full_name: Svoboda, Jakub id: 130759D2-D7DD-11E9-87D2-DE0DE6697425 last_name: Svoboda orcid: 0000-0002-1419-3267 - first_name: Soham Shrikant full_name: Joshi, Soham Shrikant id: f97aac0e-f57c-11ee-93d0-a5a82d8df168 last_name: Joshi - first_name: Josef full_name: Tkadlec, Josef id: 3F24CCC8-F248-11E8-B48F-1D18A9856A87 last_name: Tkadlec orcid: 0000-0002-1097-9684 - first_name: Krishnendu full_name: Chatterjee, Krishnendu id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87 last_name: Chatterjee orcid: 0000-0002-4561-241X citation: ama: Svoboda J, Joshi SS, Tkadlec J, Chatterjee K. Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating. PLoS Computational Biology. 2024;20(3). doi:10.1371/journal.pcbi.1012008 apa: Svoboda, J., Joshi, S. S., Tkadlec, J., & Chatterjee, K. (2024). Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1012008 chicago: Svoboda, Jakub, Soham Shrikant Joshi, Josef Tkadlec, and Krishnendu Chatterjee. “Amplifiers of Selection for the Moran Process with Both Birth-Death and Death-Birth Updating.” PLoS Computational Biology. Public Library of Science, 2024. https://doi.org/10.1371/journal.pcbi.1012008. ieee: J. Svoboda, S. S. Joshi, J. Tkadlec, and K. Chatterjee, “Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating,” PLoS Computational Biology, vol. 20, no. 3. Public Library of Science, 2024. ista: Svoboda J, Joshi SS, Tkadlec J, Chatterjee K. 2024. Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating. PLoS Computational Biology. 20(3), e1012008. mla: Svoboda, Jakub, et al. “Amplifiers of Selection for the Moran Process with Both Birth-Death and Death-Birth Updating.” PLoS Computational Biology, vol. 20, no. 3, e1012008, Public Library of Science, 2024, doi:10.1371/journal.pcbi.1012008. short: J. Svoboda, S.S. Joshi, J. Tkadlec, K. Chatterjee, PLoS Computational Biology 20 (2024). corr_author: '1' date_created: 2024-04-07T22:00:55Z date_published: 2024-03-29T00:00:00Z date_updated: 2026-07-27T12:52:03Z day: '29' ddc: - '000' department: - _id: KrCh doi: 10.1371/journal.pcbi.1012008 ec_funded: 1 external_id: arxiv: - '2401.14914' isi: - '001194482400002' file: - access_level: open_access checksum: a511cf369d9172beb123fe73f291b5cc content_type: application/pdf creator: dernst date_created: 2024-08-20T10:52:28Z date_updated: 2024-08-20T10:52:28Z file_id: '17450' file_name: 2024_PloSComBio_Svoboda.pdf file_size: 1425292 relation: main_file success: 1 file_date_updated: 2024-08-20T10:52:28Z has_accepted_license: '1' intvolume: ' 20' isi: 1 issue: '3' language: - iso: eng month: '03' oa: 1 oa_version: Published Version project: - _id: 0599E47C-7A3F-11EA-A408-12923DDC885E call_identifier: H2020 grant_number: '863818' name: 'Formal Methods for Stochastic Models: Algorithms and Applications' publication: PLoS Computational Biology publication_identifier: eissn: - 1553-7358 issn: - 1553-734X publication_status: published publisher: Public Library of Science quality_controlled: '1' related_material: record: - id: '20138' relation: dissertation_contains status: public scopus_import: '1' status: public title: Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 20 year: '2024' ... --- APC_amount: 3143,76 EUR OA_place: publisher OA_type: hybrid _id: '18703' abstract: - lang: eng text: 'Spatial games provide a simple and elegant mathematical model to study the evolution of cooperation in networks. In spatial games, individuals reside in vertices, adopt simple strategies, and interact with neighbors to receive a payoff. Depending on their own and neighbors’ payoffs, individuals can change their strategy. The payoff is determined by the Prisoners’ Dilemma, a classical matrix game, where players cooperate or defect. While cooperation is the desired behavior, defection provides a higher payoff for a selfish individual. There are many theoretical and empirical studies related to the role of the network in the evolution of cooperation. However, the fundamental question of whether there exist networks that for low initial cooperation rate ensure a high chance of fixation, i.e., cooperation spreads across the whole population, has remained elusive for spatial games with strong selection. In this work, we answer this fundamental question in the affirmative by presenting network structures that ensure high fixation probability for cooperators in the strong selection regime. Besides, our structures have many desirable properties: (a) they ensure the spread of cooperation even for a low initial density of cooperation and high temptation of defection, (b) they have constant degrees, and (c) the number of steps, until cooperation spreads, is at most quadratic in the size of the network.' acknowledgement: J.S. and K.C. were supported by the European Research Council CoG 863818 (ForM-SMArt) and Austrian Science Fund 10.55776/COE12. article_number: e2405605121 article_processing_charge: Yes article_type: original author: - first_name: Jakub full_name: Svoboda, Jakub id: 130759D2-D7DD-11E9-87D2-DE0DE6697425 last_name: Svoboda orcid: 0000-0002-1419-3267 - first_name: Krishnendu full_name: Chatterjee, Krishnendu id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87 last_name: Chatterjee orcid: 0000-0002-4561-241X citation: ama: Svoboda J, Chatterjee K. Density amplifiers of cooperation for spatial games. Proceedings of the National Academy of Sciences of the United States of America. 2024;121(50). doi:10.1073/pnas.2405605121 apa: Svoboda, J., & Chatterjee, K. (2024). Density amplifiers of cooperation for spatial games. Proceedings of the National Academy of Sciences of the United States of America. National Academy of Sciences. https://doi.org/10.1073/pnas.2405605121 chicago: Svoboda, Jakub, and Krishnendu Chatterjee. “Density Amplifiers of Cooperation for Spatial Games.” Proceedings of the National Academy of Sciences of the United States of America. National Academy of Sciences, 2024. https://doi.org/10.1073/pnas.2405605121. ieee: J. Svoboda and K. Chatterjee, “Density amplifiers of cooperation for spatial games,” Proceedings of the National Academy of Sciences of the United States of America, vol. 121, no. 50. National Academy of Sciences, 2024. ista: Svoboda J, Chatterjee K. 2024. Density amplifiers of cooperation for spatial games. Proceedings of the National Academy of Sciences of the United States of America. 121(50), e2405605121. mla: Svoboda, Jakub, and Krishnendu Chatterjee. “Density Amplifiers of Cooperation for Spatial Games.” Proceedings of the National Academy of Sciences of the United States of America, vol. 121, no. 50, e2405605121, National Academy of Sciences, 2024, doi:10.1073/pnas.2405605121. short: J. Svoboda, K. Chatterjee, Proceedings of the National Academy of Sciences of the United States of America 121 (2024). corr_author: '1' date_created: 2024-12-22T23:01:47Z date_published: 2024-12-10T00:00:00Z date_updated: 2026-07-27T12:52:03Z day: '10' ddc: - '000' department: - _id: KrCh doi: 10.1073/pnas.2405605121 ec_funded: 1 external_id: isi: - '001379596100014' pmid: - '39642209' file: - access_level: open_access checksum: 0115e9090b478e0644308c6dab58605b content_type: application/pdf creator: dernst date_created: 2025-01-02T12:14:15Z date_updated: 2025-01-02T12:14:15Z file_id: '18721' file_name: 2024_PNAS_Svoboda.pdf file_size: 2491151 relation: main_file success: 1 file_date_updated: 2025-01-02T12:14:15Z has_accepted_license: '1' intvolume: ' 121' isi: 1 issue: '50' language: - iso: eng license: https://creativecommons.org/licenses/by-nc-nd/4.0/ month: '12' oa: 1 oa_version: Published Version pmid: 1 project: - _id: 0599E47C-7A3F-11EA-A408-12923DDC885E call_identifier: H2020 grant_number: '863818' name: 'Formal Methods for Stochastic Models: Algorithms and Applications' publication: Proceedings of the National Academy of Sciences of the United States of America publication_identifier: eissn: - 1091-6490 issn: - 0027-8424 publication_status: published publisher: National Academy of Sciences quality_controlled: '1' related_material: record: - id: '20138' relation: dissertation_contains status: public scopus_import: '1' status: public title: Density amplifiers of cooperation for spatial games tmp: image: /images/cc_by_nc_nd.png legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0) short: CC BY-NC-ND (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 121 year: '2024' ... --- OA_place: repository _id: '18689' abstract: - lang: eng text: Multiplexed fluorescence microscopy imaging is widely used in biomedical applications. However, simultaneous imaging of multiple fluorophores can result in spectral leaks and overlapping, which greatly degrades image quality and subsequent analysis. Existing popular spectral unmixing methods are mainly based on computational intensive linear models and the performance is heavily dependent on the reference spectra, which may greatly preclude its further applications. In this paper, we propose a deep learning-based blindly spectral unmixing method, termed AutoUnmix, to imitate the physical spectral mixing process. A tranfer learning framework is further devised to allow our AutoUnmix adapting to a variety of imaging systems without retraining the network. Our proposed method has demonstrated real-time unmixing capabilities, surpassing existing methods by up to 100-fold in terms of unmixing speed. We further validate the reconstruction performance on both synthetic datasets and biological samples. The unmixing results of AutoUnmix achieve a highest SSIM of 0.99 in both three- and four-color imaging, with nearly up to 20% higher than other popular unmixing methods. Due to the desirable property of data independency and superior blind unmixing performance, we believe AutoUnmix is a powerful tool to study the interaction process of different organelles labeled by multiple fluorophores. acknowledged_ssus: - _id: Bio - _id: LifeSc - _id: M-Shop - _id: E-Lib acknowledgement: "We gratefully acknowledge support by the Scientific Service Units at ISTA, including the Imaging and Optics and Lab Support facilities and the mechanical workshop and Library. We thank Philipp Velicky for STED microscope alignment.\r\n\r\nThis project has received funding from the Austrian Science Fund (FWF): I 3630-B25 (J.G.D) and the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (grant agreement No 742985, J.F.). It has also received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 665385. S.T. has received funding as an ISTplus Fellow from the European Union’s Horizon 2020 Research and Innovation Programme under Marie Skłodowska-Curie grant agreement no. 754411 and from an EMBO Long-Term Fellowship (grant number ALTF 679-2018). It has further received funding from the Austrian Science Fund (FWF) grant DK W1232 (M.T, N.A-D., J.G.D). W.J. received funding via a Human Frontier Science Program postdoctoral fellowship LT000557/2018.\r\n\r\nThe funders had no role in study design, data collection and analysis, decision to publish or preparation of the manuscript." article_processing_charge: No author: - first_name: Michelle C full_name: Gallei, Michelle C id: 35A03822-F248-11E8-B48F-1D18A9856A87 last_name: Gallei orcid: 0000-0003-1286-7368 - first_name: Sven M full_name: Truckenbrodt, Sven M id: 45812BD4-F248-11E8-B48F-1D18A9856A87 last_name: Truckenbrodt - first_name: Caroline full_name: Kreuzinger, Caroline id: 382077BA-F248-11E8-B48F-1D18A9856A87 last_name: Kreuzinger - first_name: Syamala full_name: Inumella, Syamala id: F8660870-D756-11E9-98C5-34DFE5697425 last_name: Inumella orcid: 0009-0002-5890-120X - first_name: Vitali full_name: Vistunou, Vitali id: 7e146587-8972-11ed-ae7b-d7a32ea86a81 last_name: Vistunou - first_name: Christoph M full_name: Sommer, Christoph M id: 4DF26D8C-F248-11E8-B48F-1D18A9856A87 last_name: Sommer orcid: 0000-0003-1216-9105 - first_name: Mojtaba full_name: Tavakoli, Mojtaba id: 3A0A06F4-F248-11E8-B48F-1D18A9856A87 last_name: Tavakoli orcid: 0000-0002-7667-6854 - first_name: Nathalie full_name: Agudelo Duenas, Nathalie id: 40E7F008-F248-11E8-B48F-1D18A9856A87 last_name: Agudelo Duenas - first_name: Jakob full_name: Vorlaufer, Jakob id: 937696FA-C996-11E9-8C7C-CF13E6697425 last_name: Vorlaufer orcid: 0009-0000-7590-3501 - first_name: Wiebke full_name: Jahr, Wiebke id: 425C1CE8-F248-11E8-B48F-1D18A9856A87 last_name: Jahr orcid: 0000-0003-0201-2315 - first_name: Marek full_name: Randuch, Marek id: 6ac4636d-15b2-11ec-abd3-fb8df79972ae last_name: Randuch - first_name: Alexander J full_name: Johnson, Alexander J id: 46A62C3A-F248-11E8-B48F-1D18A9856A87 last_name: Johnson orcid: 0000-0002-2739-8843 - first_name: Eva full_name: Benková, Eva id: 38F4F166-F248-11E8-B48F-1D18A9856A87 last_name: Benková orcid: 0000-0002-8510-9739 - first_name: Jiří full_name: Friml, Jiří id: 4159519E-F248-11E8-B48F-1D18A9856A87 last_name: Friml orcid: 0000-0002-8302-7596 - first_name: Johann G full_name: Danzl, Johann G id: 42EFD3B6-F248-11E8-B48F-1D18A9856A87 last_name: Danzl orcid: 0000-0001-8559-3973 citation: ama: Gallei MC, Truckenbrodt SM, Kreuzinger C, et al. Super-resolution expansion microscopy in plant roots. bioRxiv. doi:10.1101/2024.02.21.581330 apa: Gallei, M. C., Truckenbrodt, S. M., Kreuzinger, C., Inumella, S., Vistunou, V., Sommer, C. M., … Danzl, J. G. (n.d.). Super-resolution expansion microscopy in plant roots. bioRxiv. https://doi.org/10.1101/2024.02.21.581330 chicago: Gallei, Michelle C, Sven M Truckenbrodt, Caroline Kreuzinger, Syamala Inumella, Vitali Vistunou, Christoph M Sommer, Mojtaba Tavakoli, et al. “Super-Resolution Expansion Microscopy in Plant Roots.” BioRxiv, n.d. https://doi.org/10.1101/2024.02.21.581330. ieee: M. C. Gallei et al., “Super-resolution expansion microscopy in plant roots,” bioRxiv. . ista: Gallei MC, Truckenbrodt SM, Kreuzinger C, Inumella S, Vistunou V, Sommer CM, Tavakoli M, Agudelo Duenas N, Vorlaufer J, Jahr W, Randuch M, Johnson AJ, Benková E, Friml J, Danzl JG. Super-resolution expansion microscopy in plant roots. bioRxiv, 10.1101/2024.02.21.581330. mla: Gallei, Michelle C., et al. “Super-Resolution Expansion Microscopy in Plant Roots.” BioRxiv, doi:10.1101/2024.02.21.581330. short: M.C. Gallei, S.M. Truckenbrodt, C. Kreuzinger, S. Inumella, V. Vistunou, C.M. Sommer, M. Tavakoli, N. Agudelo Duenas, J. Vorlaufer, W. Jahr, M. Randuch, A.J. Johnson, E. Benková, J. Friml, J.G. Danzl, BioRxiv (n.d.). corr_author: '1' date_created: 2024-12-19T12:28:00Z date_published: 2024-02-21T00:00:00Z date_updated: 2026-07-28T08:33:52Z day: '21' department: - _id: EvBe - _id: JoDa - _id: JiFr doi: 10.1101/2024.02.21.581330 ec_funded: 1 language: - iso: eng license: https://creativecommons.org/licenses/by-nc/4.0/ main_file_link: - open_access: '1' url: https://doi.org/10.1101/2024.02.21.581330 month: '02' oa: 1 oa_version: Preprint project: - _id: 261099A6-B435-11E9-9278-68D0E5697425 call_identifier: H2020 grant_number: '742985' name: Tracing Evolution of Auxin Transport and Polarity in Plants - _id: 2564DBCA-B435-11E9-9278-68D0E5697425 call_identifier: H2020 grant_number: '665385' name: International IST Doctoral Program - _id: 260C2330-B435-11E9-9278-68D0E5697425 call_identifier: H2020 grant_number: '754411' name: ISTplus - Postdoctoral Fellowships - _id: 26AA4EF2-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: W1232-B24 name: Molecular Drug Targets - _id: 269B5B22-B435-11E9-9278-68D0E5697425 grant_number: ALTF 679-2018 name: UltraX - achieving sub-nanometer resolution in light microscopy using iterative X10 microscopy in combination with nanobodies and STED publication: bioRxiv publication_status: draft related_material: record: - id: '19003' relation: later_version status: public - id: '18681' relation: dissertation_contains status: public status: public title: Super-resolution expansion microscopy in plant roots tmp: image: /images/cc_by_nc.png legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0) short: CC BY-NC (4.0) type: preprint user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 year: '2024' ... --- OA_place: repository _id: '18688' abstract: - lang: eng text: The human brain has remarkable computational power. It generates sophisticated behavioral sequences, stores engrams over an individual’s lifetime, and produces higher cognitive functions up to the level of consciousness. However, so little of our neuroscience knowledge covers the human brain, and it remains unknown whether this organ is truly unique, or is a scaled version of the extensively studied rodent brain. To address this fundamental question, we determined the cellular, synaptic, and connectivity rules of the hippocampal CA3 recurrent circuit using multicellular patch clamp-recording. This circuit is the largest autoassociative network in the brain, and plays a key role in memory and higher-order computations such as pattern separation and pattern completion. We demonstrate that human hippocampal CA3 employs sparse connectivity, in stark contrast to neocortical recurrent networks. Connectivity sparsifies from rodents to humans, providing a circuit architecture that maximizes associational power. Unitary synaptic events at human CA3–CA3 synapses showed both distinct species-specific and circuit-dependent properties, with high reliability, unique amplitude precision, and long integration times. We also identify differential scaling rules between hippocampal pathways from rodents to humans, with a moderate increase in the convergence of CA3 inputs per cell, but a marked increase in human mossy fiber innervation. Anatomically guided full-scale modeling suggests that the human brain’s sparse connectivity, expanded neuronal number, and reliable synaptic signaling combine to enhance the associative memory storage capacity of CA3. Together, our results reveal unique rules of connectivity and synaptic signaling in the human hippocampus, demonstrating the absolute necessity of human brain research and beginning to unravel the remarkable performance of our autoassociative memory circuits. acknowledged_ssus: - _id: Bio - _id: LifeSc - _id: M-Shop - _id: PreCl - _id: ScienComp acknowledgement: We thank Florian Marr for excellent technical assistance, Christina Altmutter and Julia Flor for technical support, Alois Schlögl for programming, Todor Asenov for development of the transportation box for human brain tissue, Tim Vogels for guidance on simulations, Marcus Huber for mathematical advice, and Eleftheria Kralli-Beller for manuscript editing. This research was supported by the Scientific Services Units (SSUs) of ISTA, and we are particularly grateful for assistance from Christoph Sommer and the Imaging and Optics Facility, Preclinical Facility, Life Science Facility, Miba Machine Shop, and Scientific Computing. We also acknowledge the excellent support of the Medical University of Vienna Department of Neurosurgery staff, Romana Hoeftberger and the Division of Neuropathology and Neurochemistry, and Gregor Kasprian and the Division of Neuroradiology and Musculoskeletal Radiology. The project received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (Marie Skłodowska-Curie Actions Individual Fellowship no. 101026635 to J.F.W.), the Austrian Science Fund (FWF; grant PAT 4178023 to P.J.; grant DK W1232 to M.R.T. and J.G.D.) and the Austrian Academy of Sciences (DOC fellowship 26137 to M.R.T.). article_processing_charge: No author: - first_name: Jake F. full_name: Watson, Jake F. last_name: Watson - first_name: Victor full_name: Vargas-Barroso, Victor last_name: Vargas-Barroso - first_name: Rebecca J. full_name: Morse-Mora, Rebecca J. last_name: Morse-Mora - first_name: Andrea full_name: Navas-Olive, Andrea last_name: Navas-Olive - first_name: Mojtaba full_name: Tavakoli, Mojtaba id: 3A0A06F4-F248-11E8-B48F-1D18A9856A87 last_name: Tavakoli orcid: 0000-0002-7667-6854 - first_name: Johann G full_name: Danzl, Johann G id: 42EFD3B6-F248-11E8-B48F-1D18A9856A87 last_name: Danzl orcid: 0000-0001-8559-3973 - first_name: Matthias full_name: Tomschik, Matthias last_name: Tomschik - first_name: Karl full_name: Rössler, Karl last_name: Rössler - first_name: Peter M full_name: Jonas, Peter M id: 353C1B58-F248-11E8-B48F-1D18A9856A87 last_name: Jonas orcid: 0000-0001-5001-4804 citation: ama: Watson JF, Vargas-Barroso V, Morse-Mora RJ, et al. Human hippocampal CA3 uses specific functional connectivity rules for efficient associative memory. bioRxiv. doi:10.1101/2024.05.02.592169 apa: Watson, J. F., Vargas-Barroso, V., Morse-Mora, R. J., Navas-Olive, A., Tavakoli, M., Danzl, J. G., … Jonas, P. M. (n.d.). Human hippocampal CA3 uses specific functional connectivity rules for efficient associative memory. bioRxiv. https://doi.org/10.1101/2024.05.02.592169 chicago: Watson, Jake F., Victor Vargas-Barroso, Rebecca J. Morse-Mora, Andrea Navas-Olive, Mojtaba Tavakoli, Johann G Danzl, Matthias Tomschik, Karl Rössler, and Peter M Jonas. “Human Hippocampal CA3 Uses Specific Functional Connectivity Rules for Efficient Associative Memory.” BioRxiv, n.d. https://doi.org/10.1101/2024.05.02.592169. ieee: J. F. Watson et al., “Human hippocampal CA3 uses specific functional connectivity rules for efficient associative memory,” bioRxiv. . ista: Watson JF, Vargas-Barroso V, Morse-Mora RJ, Navas-Olive A, Tavakoli M, Danzl JG, Tomschik M, Rössler K, Jonas PM. Human hippocampal CA3 uses specific functional connectivity rules for efficient associative memory. bioRxiv, 10.1101/2024.05.02.592169. mla: Watson, Jake F., et al. “Human Hippocampal CA3 Uses Specific Functional Connectivity Rules for Efficient Associative Memory.” BioRxiv, doi:10.1101/2024.05.02.592169. short: J.F. Watson, V. Vargas-Barroso, R.J. Morse-Mora, A. Navas-Olive, M. Tavakoli, J.G. Danzl, M. Tomschik, K. Rössler, P.M. Jonas, BioRxiv (n.d.). corr_author: '1' date_created: 2024-12-19T11:35:08Z date_published: 2024-05-02T00:00:00Z date_updated: 2026-07-28T08:33:51Z day: '02' department: - _id: JoDa - _id: PeJo doi: 10.1101/2024.05.02.592169 ec_funded: 1 language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.1101/2024.05.02.592169 month: '05' oa: 1 oa_version: Preprint project: - _id: fc2be41b-9c52-11eb-aca3-faa90aa144e9 call_identifier: H2020 grant_number: '101026635' name: Synaptic computations of the hippocampal CA3 circuitry - _id: 26AA4EF2-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: W1232-B24 name: Molecular Drug Targets - _id: 6285a163-2b32-11ec-9570-8e204ca2dba5 grant_number: '26137' name: Studying Organelle Structure and Function at Nanoscale Resolution with Expansion Microscopy publication: bioRxiv publication_status: draft related_material: record: - id: '18879' relation: later_version status: public - id: '18681' relation: dissertation_contains status: public status: public title: Human hippocampal CA3 uses specific functional connectivity rules for efficient associative memory type: preprint user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 year: '2024' ... --- OA_embargo: '20' OA_place: publisher _id: '18681' acknowledged_ssus: - _id: Bio - _id: PreCl - _id: LifeSc alternative_title: - ISTA Thesis article_processing_charge: No author: - first_name: Mojtaba full_name: Tavakoli, Mojtaba id: 3A0A06F4-F248-11E8-B48F-1D18A9856A87 last_name: Tavakoli orcid: 0000-0002-7667-6854 citation: ama: 'Tavakoli M. Developing molecular and structural tools for studying brain architecture with super resolution expansion microscopy. LICONN: Molecularly-informed connectomics reconstruction with light microscopy. 2024. doi:10.15479/at:ista:18681' apa: 'Tavakoli, M. (2024). Developing molecular and structural tools for studying brain architecture with super resolution expansion microscopy. LICONN: Molecularly-informed connectomics reconstruction with light microscopy. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:18681' chicago: 'Tavakoli, Mojtaba. “Developing Molecular and Structural Tools for Studying Brain Architecture with Super Resolution Expansion Microscopy. LICONN: Molecularly-Informed Connectomics Reconstruction with Light Microscopy.” Institute of Science and Technology Austria, 2024. https://doi.org/10.15479/at:ista:18681.' ieee: 'M. Tavakoli, “Developing molecular and structural tools for studying brain architecture with super resolution expansion microscopy. LICONN: Molecularly-informed connectomics reconstruction with light microscopy,” Institute of Science and Technology Austria, 2024.' ista: 'Tavakoli M. 2024. Developing molecular and structural tools for studying brain architecture with super resolution expansion microscopy. LICONN: Molecularly-informed connectomics reconstruction with light microscopy. Institute of Science and Technology Austria.' mla: 'Tavakoli, Mojtaba. Developing Molecular and Structural Tools for Studying Brain Architecture with Super Resolution Expansion Microscopy. LICONN: Molecularly-Informed Connectomics Reconstruction with Light Microscopy. Institute of Science and Technology Austria, 2024, doi:10.15479/at:ista:18681.' short: 'M. Tavakoli, Developing Molecular and Structural Tools for Studying Brain Architecture with Super Resolution Expansion Microscopy. LICONN: Molecularly-Informed Connectomics Reconstruction with Light Microscopy, Institute of Science and Technology Austria, 2024.' corr_author: '1' das_tickbox: '1' date_created: 2024-12-19T02:30:39Z date_published: 2024-12-20T00:00:00Z date_updated: 2026-07-28T08:33:52Z day: '20' ddc: - '600' - '570' degree_awarded: PhD department: - _id: GradSch - _id: JoDa doi: 10.15479/at:ista:18681 doi_confirm: '1' file: - access_level: closed checksum: b61651d417cafddd740a8528f46068c5 content_type: application/vnd.openxmlformats-officedocument.wordprocessingml.document creator: mtavakol date_created: 2024-12-20T10:23:17Z date_updated: 2024-12-20T10:31:37Z file_id: '18699' file_name: Thesis_Mojtaba Tavakoli_.docx file_size: 118593521 relation: source_file - access_level: closed checksum: c80bcfd1a34c23afc3538052325283e5 content_type: application/pdf creator: mtavakol date_created: 2024-12-20T10:25:12Z date_updated: 2026-07-28T08:33:51Z embargo: 2027-08-01 embargo_to: open_access file_id: '18700' file_name: Thesis_Mojtaba Tavakoli_.pdf file_size: 63885521 relation: main_file file_date_updated: 2026-07-28T08:33:51Z has_accepted_license: '1' language: - iso: eng month: '12' oa_version: Published Version page: '230' project: - _id: 6285a163-2b32-11ec-9570-8e204ca2dba5 grant_number: '26137' name: Studying Organelle Structure and Function at Nanoscale Resolution with Expansion Microscopy - _id: 26AA4EF2-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: W1232-B24 name: Molecular Drug Targets publication_identifier: isbn: - 978-3-99078-048-0 issn: - 2663-337X publication_status: published publisher: Institute of Science and Technology Austria related_material: record: - id: '11160' relation: part_of_dissertation status: public - id: '18688' relation: part_of_dissertation status: public - id: '18677' relation: part_of_dissertation status: public - id: '18689' relation: part_of_dissertation status: public status: public supervisor: - first_name: Johann G full_name: Danzl, Johann G id: 42EFD3B6-F248-11E8-B48F-1D18A9856A87 last_name: Danzl orcid: 0000-0001-8559-3973 title: 'Developing molecular and structural tools for studying brain architecture with super resolution expansion microscopy. LICONN: Molecularly-informed connectomics reconstruction with light microscopy' tmp: image: /images/cc_by_nc_nd.png legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0) short: CC BY-NC-ND (4.0) type: dissertation user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9 year: '2024' ... --- OA_place: repository _id: '18677' abstract: - lang: eng text: The information-processing capability of the brain’s cellular network depends on the physical wiring pattern between neurons and their molecular and functional characteristics. Mapping neurons and resolving their individual synaptic connections can be achieved by volumetric imaging at nanoscale resolution with dense cellular labeling. Light microscopy is uniquely positioned to visualize specific molecules but dense, synapse-level circuit reconstruction by light microscopy has been out of reach due to limitations in resolution, contrast, and volumetric imaging capability. Here we developed light-microscopy based connectomics (LICONN). We integrated specifically engineered hydrogel embedding and expansion with comprehensive deep-learning based segmentation and analysis of connectivity, thus directly incorporating molecular information in synapse-level brain tissue reconstructions. LICONN will allow synapse-level brain tissue phenotyping in biological experiments in a readily adoptable manner. acknowledged_ssus: - _id: E-Lib - _id: M-Shop - _id: LifeSc - _id: Bio - _id: ScienComp acknowledgement: "We thank Sven Dorkenwald and Peter Li for critical reading of the\r\nmanuscript. We acknowledge expert support by ISTA’s scientific service units: Imaging and\r\nOptics, Lab Support, Scientific Computing, Preclinical Facility, Miba Machine Shop, and Library.\r\nWe gratefully acknowledge funding by the following sources:\r\nAustrian Science Fund (FWF) grant DK W1232 (JGD, MRT)\r\nAustrian Academy of Sciences DOC fellowship 26137 (MRT)\r\nEU Horizon 2020 program, Marie Skłodowska-Curie Actions Fellowship 665385 (JL)\r\nGesellschaft für Forschungsförderung NÖ (NFB) grant LSC18-022 (JGD)\r\nEuropean Union’s Horizon 2020 research and innovation programme, European Research\r\nCouncil (ERC) grant 101044865 “SecretAutism.”\r\n" article_processing_charge: No author: - first_name: Mojtaba full_name: Tavakoli, Mojtaba id: 3A0A06F4-F248-11E8-B48F-1D18A9856A87 last_name: Tavakoli orcid: 0000-0002-7667-6854 - first_name: Julia full_name: Lyudchik, Julia id: 46E28B80-F248-11E8-B48F-1D18A9856A87 last_name: Lyudchik - first_name: Michał full_name: Januszewski, Michał last_name: Januszewski - first_name: Vitali full_name: Vistunou, Vitali id: 7e146587-8972-11ed-ae7b-d7a32ea86a81 last_name: Vistunou - first_name: Nathalie full_name: Agudelo Duenas, Nathalie id: 40E7F008-F248-11E8-B48F-1D18A9856A87 last_name: Agudelo Duenas - first_name: Jakob full_name: Vorlaufer, Jakob id: 937696FA-C996-11E9-8C7C-CF13E6697425 last_name: Vorlaufer orcid: 0009-0000-7590-3501 - first_name: Christoph M full_name: Sommer, Christoph M id: 4DF26D8C-F248-11E8-B48F-1D18A9856A87 last_name: Sommer orcid: 0000-0003-1216-9105 - first_name: Caroline full_name: Kreuzinger, Caroline id: 382077BA-F248-11E8-B48F-1D18A9856A87 last_name: Kreuzinger - first_name: Bárbara full_name: Oliveira, Bárbara id: 3B03AA1A-F248-11E8-B48F-1D18A9856A87 last_name: Oliveira - first_name: Alban full_name: Cenameri, Alban id: 9ac8f577-2357-11eb-997a-e566c5550886 last_name: Cenameri - first_name: Gaia full_name: Novarino, Gaia id: 3E57A680-F248-11E8-B48F-1D18A9856A87 last_name: Novarino orcid: 0000-0002-7673-7178 - first_name: Viren full_name: Jain, Viren last_name: Jain - first_name: Johann G full_name: Danzl, Johann G id: 42EFD3B6-F248-11E8-B48F-1D18A9856A87 last_name: Danzl orcid: 0000-0001-8559-3973 citation: ama: Tavakoli M, Lyudchik J, Januszewski M, et al. Light-microscopy based dense connectomic reconstruction of mammalian brain tissue. bioRxiv. doi:10.1101/2024.03.01.582884 apa: Tavakoli, M., Lyudchik, J., Januszewski, M., Vistunou, V., Agudelo Duenas, N., Vorlaufer, J., … Danzl, J. G. (n.d.). Light-microscopy based dense connectomic reconstruction of mammalian brain tissue. bioRxiv. https://doi.org/10.1101/2024.03.01.582884 chicago: Tavakoli, Mojtaba, Julia Lyudchik, Michał Januszewski, Vitali Vistunou, Nathalie Agudelo Duenas, Jakob Vorlaufer, Christoph M Sommer, et al. “Light-Microscopy Based Dense Connectomic Reconstruction of Mammalian Brain Tissue.” BioRxiv, n.d. https://doi.org/10.1101/2024.03.01.582884. ieee: M. Tavakoli et al., “Light-microscopy based dense connectomic reconstruction of mammalian brain tissue,” bioRxiv. . ista: Tavakoli M, Lyudchik J, Januszewski M, Vistunou V, Agudelo Duenas N, Vorlaufer J, Sommer CM, Kreuzinger C, Oliveira B, Cenameri A, Novarino G, Jain V, Danzl JG. Light-microscopy based dense connectomic reconstruction of mammalian brain tissue. bioRxiv, 10.1101/2024.03.01.582884. mla: Tavakoli, Mojtaba, et al. “Light-Microscopy Based Dense Connectomic Reconstruction of Mammalian Brain Tissue.” BioRxiv, doi:10.1101/2024.03.01.582884. short: M. Tavakoli, J. Lyudchik, M. Januszewski, V. Vistunou, N. Agudelo Duenas, J. Vorlaufer, C.M. Sommer, C. Kreuzinger, B. Oliveira, A. Cenameri, G. Novarino, V. Jain, J.G. Danzl, BioRxiv (n.d.). corr_author: '1' date_created: 2024-12-18T14:48:24Z date_published: 2024-07-08T00:00:00Z date_updated: 2026-07-28T08:33:51Z day: '08' department: - _id: GaNo - _id: JoDa doi: 10.1101/2024.03.01.582884 ec_funded: 1 language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.1101/2024.03.01.582884 month: '07' oa: 1 oa_version: Preprint project: - _id: 6285a163-2b32-11ec-9570-8e204ca2dba5 grant_number: '26137' name: Studying Organelle Structure and Function at Nanoscale Resolution with Expansion Microscopy - _id: 2564DBCA-B435-11E9-9278-68D0E5697425 call_identifier: H2020 grant_number: '665385' name: International IST Doctoral Program - _id: 34ba8964-11ca-11ed-8bc3-e15864e7e9a6 grant_number: '101044865' name: Toward an understanding of the brain interstitial system and the extracellular proteome in health and autism spectrum disorders - _id: 26AA4EF2-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: W1232-B24 name: Molecular Drug Targets publication: bioRxiv publication_status: draft related_material: record: - id: '18674' relation: dissertation_contains status: public - id: '19704' relation: later_version status: public - id: '18681' relation: dissertation_contains status: public status: public title: Light-microscopy based dense connectomic reconstruction of mammalian brain tissue tmp: image: /images/cc_by_nc_nd.png legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0) short: CC BY-NC-ND (4.0) type: preprint user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 year: '2024' ... --- APC_amount: 6468 EUR DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '14793' abstract: - lang: eng text: Superconductor/semiconductor hybrid devices have attracted increasing interest in the past years. Superconducting electronics aims to complement semiconductor technology, while hybrid architectures are at the forefront of new ideas such as topological superconductivity and protected qubits. In this work, we engineer the induced superconductivity in two-dimensional germanium hole gas by varying the distance between the quantum well and the aluminum. We demonstrate a hard superconducting gap and realize an electrically and flux tunable superconducting diode using a superconducting quantum interference device (SQUID). This allows to tune the current phase relation (CPR), to a regime where single Cooper pair tunneling is suppressed, creating a sin(2y) CPR. Shapiro experiments complement this interpretation and the microwave drive allows to create a diode with ≈ 100% efficiency. The reported results open up the path towards integration of spin qubit devices, microwave resonators and (protected) superconducting qubits on the same silicon technology compatible platform. acknowledged_ssus: - _id: M-Shop - _id: NanoFab acknowledgement: "We acknowledge Alexander Brinkmann, Alessandro Crippa, Francesco Giazotto, Andrew Higginbotham, Andrea Iorio, Giordano Scappucci, Christian Schonenberger, and Lukas Splitthoff for helpful discussions. We thank Marcel Verheijen for the support in the TEM analysis. This research and related results were made possible with the support of the NOMIS\r\nFoundation. It was supported by the Scientific Service Units of ISTA through resources provided by the MIBA Machine Shop and the nanofabrication facility, the European Union’s Horizon 2020 research andinnovation programme under Grant Agreement No 862046, the HORIZONRIA\r\n101069515 project, the European Innovation Council Pathfinder grant no. 101115315 (QuKiT), and the FWF Projects #P-32235, #P-36507 and #F-8606. For the purpose of open access, the authors have applied a CC BY public copyright licence to any Author Accepted Manuscript version arising from this submission. R.S.S. acknowledges Spanish CM “Talento Program\"\r\nProject No. 2022-T1/IND-24070. J.J. acknowledges European Research Council TOCINA 834290." article_number: '169' article_processing_charge: Yes article_type: original author: - first_name: Marco full_name: Valentini, Marco id: C0BB2FAC-D767-11E9-B658-BC13E6697425 last_name: Valentini - first_name: Oliver full_name: Sagi, Oliver id: 71616374-A8E9-11E9-A7CA-09ECE5697425 last_name: Sagi - first_name: Levon full_name: Baghumyan, Levon id: 7aa1f788-b527-11ee-aa9e-e6111a79e0c7 last_name: Baghumyan - first_name: Thijs full_name: de Gijsel, Thijs id: a0ece13c-b527-11ee-929d-bad130106eee last_name: de Gijsel - first_name: Jason full_name: Jung, Jason id: 4C9ACE7A-F248-11E8-B48F-1D18A9856A87 last_name: Jung - first_name: Stefano full_name: Calcaterra, Stefano last_name: Calcaterra - first_name: Andrea full_name: Ballabio, Andrea last_name: Ballabio - first_name: Juan L full_name: Aguilera Servin, Juan L id: 2A67C376-F248-11E8-B48F-1D18A9856A87 last_name: Aguilera Servin orcid: 0000-0002-2862-8372 - first_name: Kushagra full_name: Aggarwal, Kushagra id: b22ab905-3539-11eb-84c3-fc159dcd79cb last_name: Aggarwal orcid: 0000-0001-9985-9293 - first_name: Marian full_name: Janik, Marian id: 396A1950-F248-11E8-B48F-1D18A9856A87 last_name: Janik orcid: 0009-0003-9037-8831 - first_name: Thomas full_name: Adletzberger, Thomas id: 38756BB2-F248-11E8-B48F-1D18A9856A87 last_name: Adletzberger - first_name: Rubén full_name: Seoane Souto, Rubén last_name: Seoane Souto - first_name: Martin full_name: Leijnse, Martin last_name: Leijnse - first_name: Jeroen full_name: Danon, Jeroen last_name: Danon - first_name: Constantin full_name: Schrade, Constantin last_name: Schrade - first_name: Erik full_name: Bakkers, Erik last_name: Bakkers - first_name: Daniel full_name: Chrastina, Daniel last_name: Chrastina - first_name: Giovanni full_name: Isella, Giovanni last_name: Isella - first_name: Georgios full_name: Katsaros, Georgios id: 38DB5788-F248-11E8-B48F-1D18A9856A87 last_name: Katsaros orcid: 0000-0001-8342-202X citation: ama: Valentini M, Sagi O, Baghumyan L, et al. Parity-conserving Cooper-pair transport and ideal superconducting diode in planar germanium. Nature Communications. 2024;15. doi:10.1038/s41467-023-44114-0 apa: Valentini, M., Sagi, O., Baghumyan, L., de Gijsel, T., Jung, J., Calcaterra, S., … Katsaros, G. (2024). Parity-conserving Cooper-pair transport and ideal superconducting diode in planar germanium. Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-023-44114-0 chicago: Valentini, Marco, Oliver Sagi, Levon Baghumyan, Thijs de Gijsel, Jason Jung, Stefano Calcaterra, Andrea Ballabio, et al. “Parity-Conserving Cooper-Pair Transport and Ideal Superconducting Diode in Planar Germanium.” Nature Communications. Springer Nature, 2024. https://doi.org/10.1038/s41467-023-44114-0. ieee: M. Valentini et al., “Parity-conserving Cooper-pair transport and ideal superconducting diode in planar germanium,” Nature Communications, vol. 15. Springer Nature, 2024. ista: Valentini M, Sagi O, Baghumyan L, de Gijsel T, Jung J, Calcaterra S, Ballabio A, Aguilera Servin JL, Aggarwal K, Janik M, Adletzberger T, Seoane Souto R, Leijnse M, Danon J, Schrade C, Bakkers E, Chrastina D, Isella G, Katsaros G. 2024. Parity-conserving Cooper-pair transport and ideal superconducting diode in planar germanium. Nature Communications. 15, 169. mla: Valentini, Marco, et al. “Parity-Conserving Cooper-Pair Transport and Ideal Superconducting Diode in Planar Germanium.” Nature Communications, vol. 15, 169, Springer Nature, 2024, doi:10.1038/s41467-023-44114-0. short: M. Valentini, O. Sagi, L. Baghumyan, T. de Gijsel, J. Jung, S. Calcaterra, A. Ballabio, J.L. Aguilera Servin, K. Aggarwal, M. Janik, T. Adletzberger, R. Seoane Souto, M. Leijnse, J. Danon, C. Schrade, E. Bakkers, D. Chrastina, G. Isella, G. Katsaros, Nature Communications 15 (2024). corr_author: '1' date_created: 2024-01-14T23:00:56Z date_published: 2024-01-02T00:00:00Z date_updated: 2026-07-29T07:04:56Z day: '02' ddc: - '530' department: - _id: GeKa doi: 10.1038/s41467-023-44114-0 ec_funded: 1 external_id: isi: - '001142794000839' pmid: - '38167818' file: - access_level: open_access checksum: ef79173b45eeaf984ffa61ef2f8a52ab content_type: application/pdf creator: dernst date_created: 2024-01-17T11:03:00Z date_updated: 2024-01-17T11:03:00Z file_id: '14825' file_name: 2024_NatureComm_Valentini.pdf file_size: 2336595 relation: main_file success: 1 file_date_updated: 2024-01-17T11:03:00Z has_accepted_license: '1' intvolume: ' 15' isi: 1 language: - iso: eng month: '01' oa: 1 oa_version: Published Version pmid: 1 project: - _id: 237E5020-32DE-11EA-91FC-C7463DDC885E call_identifier: H2020 grant_number: '862046' name: TOPOLOGICALLY PROTECTED AND SCALABLE QUANTUM BITS - _id: 34c0acea-11ca-11ed-8bc3-8775e10fd452 grant_number: '101069515' name: Integrated Germanium Quantum Technology - _id: bdc2ca30-d553-11ed-ba76-cf164a5bb811 grant_number: '101115315' name: Quantum bits with Kitaev Transmons - _id: 237B3DA4-32DE-11EA-91FC-C7463DDC885E call_identifier: FWF grant_number: P32235 name: Towards scalable hut wire quantum devices - _id: bd8bd29e-d553-11ed-ba76-f0070d4b237a grant_number: P36507 name: Merging spin and superconducting qubits in planar Ge - _id: 34a66131-11ca-11ed-8bc3-a31681c6b03e grant_number: F8606 name: 'Center for Correlated Quantum Materials and Solid State Quantum Systems: Conventional and unconventional topological superconductors' - _id: 3AC91DDA-15DF-11EA-824D-93A3E7B544D1 call_identifier: FWF name: FWF Open Access Fund publication: Nature Communications publication_identifier: eissn: - 2041-1723 publication_status: published publisher: Springer Nature quality_controlled: '1' related_material: record: - id: '13312' relation: earlier_version status: public scopus_import: '1' status: public title: Parity-conserving Cooper-pair transport and ideal superconducting diode in planar germanium tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 15 year: '2024' ... --- _id: '12312' abstract: - lang: eng text: "Let $\\ell$ be a prime number. We classify the subgroups $G$ of $\\operatorname{Sp}_4(\\mathbb{F}_\\ell)$ and $\\operatorname{GSp}_4(\\mathbb{F}_\\ell)$ that act irreducibly on $\\mathbb{F}_\\ell^4$, but such that every element of $G$ fixes an $\\mathbb{F}_\\ell$-vector subspace of dimension 1. We use this classification to prove that the local-global principle for isogenies of degree $\\ell$ between abelian surfaces over number fields holds in many cases -- in particular, whenever the abelian surface has non-trivial endomorphisms and $\\ell$ is large enough with respect to the field of definition. Finally, we prove that there exist arbitrarily large primes $\\ell$ for which some abelian surface\r\n$A/\\mathbb{Q}$ fails the local-global principle for isogenies of degree $\\ell$." acknowledgement: "It is a pleasure to thank Samuele Anni for his interest in this project and for several discussions on the topic of this paper, which led in particular to Remark 6.30 and to a better understanding of the difficulties with [6]. We also thank John Cullinan for correspondence about [6] and Barinder Banwait for his many insightful comments on the first version of this paper. Finally, we thank the referee for their thorough reading of the manuscript.\r\nOpen access funding provided by Università di Pisa within the CRUI-CARE Agreement. The authors have been partially supported by MIUR (Italy) through PRIN 2017 “Geometric, algebraic and analytic methods in arithmetic\" and PRIN 2022 “Semiabelian varieties, Galois representations and related Diophantine problems\", and by the University of Pisa through PRA 2018-19 and 2022 “Spazi di moduli, rappresentazioni e strutture combinatorie\". The first author is a member of the INdAM group GNSAGA." article_number: '18' article_processing_charge: Yes (via OA deal) article_type: original arxiv: 1 author: - first_name: Davide full_name: Lombardo, Davide last_name: Lombardo - first_name: Matteo full_name: Verzobio, Matteo id: 7aa8f170-131e-11ed-88e1-a9efd01027cb last_name: Verzobio orcid: 0000-0002-0854-0306 citation: ama: Lombardo D, Verzobio M. On the local-global principle for isogenies of abelian surfaces. Selecta Mathematica. 2024;30(2). doi:10.1007/s00029-023-00908-0 apa: Lombardo, D., & Verzobio, M. (2024). On the local-global principle for isogenies of abelian surfaces. Selecta Mathematica. Springer Nature. https://doi.org/10.1007/s00029-023-00908-0 chicago: Lombardo, Davide, and Matteo Verzobio. “On the Local-Global Principle for Isogenies of Abelian Surfaces.” Selecta Mathematica. Springer Nature, 2024. https://doi.org/10.1007/s00029-023-00908-0. ieee: D. Lombardo and M. Verzobio, “On the local-global principle for isogenies of abelian surfaces,” Selecta Mathematica, vol. 30, no. 2. Springer Nature, 2024. ista: Lombardo D, Verzobio M. 2024. On the local-global principle for isogenies of abelian surfaces. Selecta Mathematica. 30(2), 18. mla: Lombardo, Davide, and Matteo Verzobio. “On the Local-Global Principle for Isogenies of Abelian Surfaces.” Selecta Mathematica, vol. 30, no. 2, 18, Springer Nature, 2024, doi:10.1007/s00029-023-00908-0. short: D. Lombardo, M. Verzobio, Selecta Mathematica 30 (2024). corr_author: '1' das_tickbox: '0' date_created: 2023-01-16T11:45:53Z date_published: 2024-01-26T00:00:00Z date_updated: 2026-07-29T09:53:10Z day: '26' ddc: - '510' department: - _id: TiBr doi: 10.1007/s00029-023-00908-0 external_id: arxiv: - '2206.15240' isi: - '001148959100001' file: - access_level: open_access checksum: ae75441420aabd80c5828bce38272ba1 content_type: application/pdf creator: dernst date_created: 2024-07-22T09:33:58Z date_updated: 2024-07-22T09:33:58Z file_id: '17298' file_name: 2024_SelectaMath_Lombardo.pdf file_size: 1301415 relation: main_file success: 1 file_date_updated: 2024-07-22T09:33:58Z has_accepted_license: '1' intvolume: ' 30' isi: 1 issue: '2' language: - iso: eng month: '01' oa: 1 oa_version: Published Version publication: Selecta Mathematica publication_identifier: eissn: - 1420-9020 issn: - 1022-1824 publication_status: published publisher: Springer Nature quality_controlled: '1' researchdata_availability: no scopus_import: '1' status: public supplementarymaterial: no title: On the local-global principle for isogenies of abelian surfaces tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 30 year: '2024' ... --- OA_place: repository OA_type: green _id: '19425' abstract: - lang: eng text: "We demonstrate that periodically driven quantum rotors provide a promising and broadly applicable platform to implement multi-gap topological phases, where groups of bands can acquire topological invariants due to non-Abelian braiding of band degeneracies. By adiabatically varying the periodic kicks to the rotor we find nodal-line braiding, which causes sign flips of topological charges of band nodes and can prevent them from annihilating, indicated by non-zero values of the %non-Abelian patch Euler class. In particular, we report\r\non the emergence of an anomalous Dirac string phase arising in the strongly driven regime, a truly out-of-equilibrium phase of the quantum rotor. This phase emanates from braiding processes involving all (quasienergy) gaps and manifests itself with edge states at zero angular momentum. Our results reveal direct applications in state-of-the-art experiments of quantum rotors, such as linear molecules driven by periodic far-off-resonant laser pulses or artificial\r\nquantum rotors in optical lattices, whose extensive versatility offers precise modification and observation of novel non-Abelian topological properties. " acknowledgement: "We thank G. M. Koutentakis, S. Wimberger, J. G. E. Harris, T. Enss and A. Ghazaryan for fruitful discussions. M.L. acknowledges support by the European Research Council (ERC) Starting Grant No. 801770 (ANGULON). R.-J. S. acknowledges funding from a EPSRC ERC underwrite grant EP/X025829/1, a EPSRC New Investigator Award grant EP/W00187X/1, as well as Trinity College, Cambridge. F.N.U. acknowledges support from the Marie ¨Sk lodowska-Curie programme of the European Commission [Grant No. 893915], Simons Investigator Award\r\n[Grant No. 511029] and Trinity College Cambridge." article_number: '2408.16848' article_processing_charge: No arxiv: 1 author: - first_name: Volker full_name: Karle, Volker id: D7C012AE-D7ED-11E9-95E8-1EC5E5697425 last_name: Karle orcid: 0000-0002-6963-0129 - first_name: Mikhail full_name: Lemeshko, Mikhail id: 37CB05FA-F248-11E8-B48F-1D18A9856A87 last_name: Lemeshko orcid: 0000-0002-6990-7802 - first_name: Adrien full_name: Bouhon, Adrien last_name: Bouhon - first_name: Robert-Jan full_name: Slager, Robert-Jan last_name: Slager - first_name: F. Nur full_name: Ünal, F. Nur last_name: Ünal citation: ama: Karle V, Lemeshko M, Bouhon A, Slager R-J, Ünal FN. Anomalous multi-gap topological phases in periodically driven quantum  rotors. arXiv. doi:10.48550/arXiv.2408.16848 apa: Karle, V., Lemeshko, M., Bouhon, A., Slager, R.-J., & Ünal, F. N. (n.d.). Anomalous multi-gap topological phases in periodically driven quantum  rotors. arXiv. https://doi.org/10.48550/arXiv.2408.16848 chicago: Karle, Volker, Mikhail Lemeshko, Adrien Bouhon, Robert-Jan Slager, and F. Nur Ünal. “Anomalous Multi-Gap Topological Phases in Periodically Driven Quantum  Rotors.” ArXiv, n.d. https://doi.org/10.48550/arXiv.2408.16848. ieee: V. Karle, M. Lemeshko, A. Bouhon, R.-J. Slager, and F. N. Ünal, “Anomalous multi-gap topological phases in periodically driven quantum  rotors,” arXiv. . ista: Karle V, Lemeshko M, Bouhon A, Slager R-J, Ünal FN. Anomalous multi-gap topological phases in periodically driven quantum  rotors. arXiv, 2408.16848. mla: Karle, Volker, et al. “Anomalous Multi-Gap Topological Phases in Periodically Driven Quantum  Rotors.” ArXiv, 2408.16848, doi:10.48550/arXiv.2408.16848. short: V. Karle, M. Lemeshko, A. Bouhon, R.-J. Slager, F.N. Ünal, ArXiv (n.d.). date_created: 2025-03-20T07:48:23Z date_published: 2024-08-29T00:00:00Z date_updated: 2026-07-29T08:59:31Z day: '29' department: - _id: MiLe doi: 10.48550/arXiv.2408.16848 ec_funded: 1 external_id: arxiv: - '2408.16848' language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.48550/arXiv.2408.16848 month: '08' oa: 1 oa_version: Preprint project: - _id: 2688CF98-B435-11E9-9278-68D0E5697425 call_identifier: H2020 grant_number: '801770' name: 'Angulon: physics and applications of a new quasiparticle' publication: arXiv publication_status: draft related_material: record: - id: '19393' relation: dissertation_contains status: public - id: '21009' relation: later_version status: public status: public title: Anomalous multi-gap topological phases in periodically driven quantum rotors type: preprint user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 year: '2024' ... --- _id: '17127' abstract: - lang: eng text: "Let P(x)∈Z[x] be a polynomial with at least two distinct complex roots. We prove that the number of solutions (x1,…,xk,y1,…,yk)∈[N]2k to the equation\r\n∏1≤i≤kP(xi)=∏1≤j≤kP(yj)≠0\r\n(for any k≥1 ) is asymptotically k!Nk as N→+∞. This solves a question first proposed and studied by Najnudel. The result can also be interpreted as saying that all even moments of random partial sums 1N√∑n≤Nf(P(n)) match standard complex Gaussian moments as N→+∞\r\n , where f is the Steinhaus random multiplicative function." acknowledgement: 'We thank Oleksiy Klurman, Ilya Shkredov, and Igor Shparlinski for helpful comments on earlier versions of the paper, and thank Yotam Hendel for providing a reference for Lemma 2.1. We also thank the anonymous referee for their generous corrections and comments. The first author has received funding from the European Union''s Horizon 2020 Research and Innovation Program under the Marie Skłodowska-Curie Grant Agreement Number: 101034413. The second author is partially supported by the Cuthbert C. Hurd Graduate Fellowship in the Mathematical Sciences, Stanford.' article_processing_charge: No article_type: original arxiv: 1 author: - first_name: Victor full_name: Wang, Victor id: 76096395-aea4-11ed-a680-ab8ebbd3f1b9 last_name: Wang orcid: 0000-0002-0704-7026 - first_name: Max Wenqiang full_name: Xu, Max Wenqiang last_name: Xu citation: ama: Wang V, Xu MW. Paucity phenomena for polynomial products. Bulletin of the London Mathematical Society. 2024;56(8):2718-2726. doi:10.1112/blms.13095 apa: Wang, V., & Xu, M. W. (2024). Paucity phenomena for polynomial products. Bulletin of the London Mathematical Society. London Mathematical Society. https://doi.org/10.1112/blms.13095 chicago: Wang, Victor, and Max Wenqiang Xu. “Paucity Phenomena for Polynomial Products.” Bulletin of the London Mathematical Society. London Mathematical Society, 2024. https://doi.org/10.1112/blms.13095. ieee: V. Wang and M. W. Xu, “Paucity phenomena for polynomial products,” Bulletin of the London Mathematical Society, vol. 56, no. 8. London Mathematical Society, pp. 2718–2726, 2024. ista: Wang V, Xu MW. 2024. Paucity phenomena for polynomial products. Bulletin of the London Mathematical Society. 56(8), 2718–2726. mla: Wang, Victor, and Max Wenqiang Xu. “Paucity Phenomena for Polynomial Products.” Bulletin of the London Mathematical Society, vol. 56, no. 8, London Mathematical Society, 2024, pp. 2718–26, doi:10.1112/blms.13095. short: V. Wang, M.W. Xu, Bulletin of the London Mathematical Society 56 (2024) 2718–2726. das_tickbox: '0' date_created: 2024-06-09T22:01:03Z date_published: 2024-08-01T00:00:00Z date_updated: 2026-07-29T09:57:59Z day: '01' ddc: - '512' department: - _id: TiBr doi: 10.1112/blms.13095 ec_funded: 1 external_id: arxiv: - '2211.02908' isi: - '001235729900001' file: - access_level: open_access checksum: ae386a4031856efac23c7cdcb53b559b content_type: application/pdf creator: vwang date_created: 2024-08-20T08:36:32Z date_updated: 2024-08-20T08:36:32Z file_id: '17446' file_name: Paucity_phenomena_for_polynomial_products__Wang_Xu_ (7).pdf file_size: 331775 relation: main_file success: 1 file_date_updated: 2024-08-20T08:36:32Z has_accepted_license: '1' intvolume: ' 56' isi: 1 issue: '8' language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.48550/arXiv.2211.02908 month: '08' oa: 1 oa_version: Submitted Version page: 2718-2726 project: - _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c call_identifier: H2020 grant_number: '101034413' name: 'IST-BRIDGE: International postdoctoral program' publication: Bulletin of the London Mathematical Society publication_identifier: eissn: - 1469-2120 issn: - 0024-6093 publication_status: published publisher: London Mathematical Society quality_controlled: '1' researchdata_availability: no scopus_import: '1' status: public supplementarymaterial: no title: Paucity phenomena for polynomial products type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 56 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '15338' abstract: - lang: eng text: We introduce a new class of generalised quadratic forms over totally real number fields, which is rich enough to capture the arithmetic of arbitrary systems of quadrics over the rational numbers. We explore this connection through a version of the Hardy–Littlewood circle method over number fields. acknowledgement: The authors are grateful to Jayce Getz for asking questions that set this project in motion and to the anonymous referee for useful comments. T.B. was supported by a FWF grant (DOI 10.55776/P32428) and by a grant from the Institute for Advanced Study School of Mathematics. L.B.P. was partially supported by NSF DMS-2200470 and DMS-1652173, and thanks the Hausdorff Centre for Mathematics for hosting research visits. article_processing_charge: Yes (via OA deal) article_type: original arxiv: 1 author: - first_name: Timothy D full_name: Browning, Timothy D id: 35827D50-F248-11E8-B48F-1D18A9856A87 last_name: Browning orcid: 0000-0002-8314-0177 - first_name: Lillian B. full_name: Pierce, Lillian B. last_name: Pierce - first_name: Damaris full_name: Schindler, Damaris last_name: Schindler citation: ama: Browning TD, Pierce LB, Schindler D. Generalised quadratic forms over totally real number fields. Journal of the Institute of Mathematics of Jussieu. 2024;23(6):2859-2912. doi:10.1017/S1474748024000161 apa: Browning, T. D., Pierce, L. B., & Schindler, D. (2024). Generalised quadratic forms over totally real number fields. Journal of the Institute of Mathematics of Jussieu. Cambridge University Press. https://doi.org/10.1017/S1474748024000161 chicago: Browning, Timothy D, Lillian B. Pierce, and Damaris Schindler. “Generalised Quadratic Forms over Totally Real Number Fields.” Journal of the Institute of Mathematics of Jussieu. Cambridge University Press, 2024. https://doi.org/10.1017/S1474748024000161. ieee: T. D. Browning, L. B. Pierce, and D. Schindler, “Generalised quadratic forms over totally real number fields,” Journal of the Institute of Mathematics of Jussieu, vol. 23, no. 6. Cambridge University Press, pp. 2859–2912, 2024. ista: Browning TD, Pierce LB, Schindler D. 2024. Generalised quadratic forms over totally real number fields. Journal of the Institute of Mathematics of Jussieu. 23(6), 2859–2912. mla: Browning, Timothy D., et al. “Generalised Quadratic Forms over Totally Real Number Fields.” Journal of the Institute of Mathematics of Jussieu, vol. 23, no. 6, Cambridge University Press, 2024, pp. 2859–912, doi:10.1017/S1474748024000161. short: T.D. Browning, L.B. Pierce, D. Schindler, Journal of the Institute of Mathematics of Jussieu 23 (2024) 2859–2912. corr_author: '1' das_tickbox: '0' date_created: 2024-04-21T22:00:53Z date_published: 2024-11-01T00:00:00Z date_updated: 2026-07-29T09:57:08Z day: '01' ddc: - '510' department: - _id: TiBr doi: 10.1017/S1474748024000161 external_id: arxiv: - '2212.11038' isi: - '001200337400001' file: - access_level: open_access checksum: b300541d581a71d92314df5ae8c4cc09 content_type: application/pdf creator: dernst date_created: 2025-01-09T08:56:33Z date_updated: 2025-01-09T08:56:33Z file_id: '18793' file_name: 2024_JournInstMathJussieu_Browning.pdf file_size: 690974 relation: main_file success: 1 file_date_updated: 2025-01-09T08:56:33Z has_accepted_license: '1' intvolume: ' 23' isi: 1 issue: '6' language: - iso: eng month: '11' oa: 1 oa_version: Published Version page: 2859-2912 project: - _id: 26AEDAB2-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: P32428 name: New frontiers of the Manin conjecture publication: Journal of the Institute of Mathematics of Jussieu publication_identifier: eissn: - 1475-3030 issn: - 1474-7480 publication_status: published publisher: Cambridge University Press quality_controlled: '1' researchdata_availability: no scopus_import: '1' status: public supplementarymaterial: no title: Generalised quadratic forms over totally real number fields tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 23 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '15337' abstract: - lang: eng text: We prove the Manin–Peyre conjecture for the number of rational points of bounded height outside of a thin subset on a family of Fano threefolds of bidegree (1, 2). acknowledgement: Open access funding provided by Institute of Science and Technology (IST Austria).The authors are grateful to Florian Wilsch for useful comments. While working on this paper the authors were supported by FWF grant P 32428. article_processing_charge: Yes (via OA deal) article_type: original arxiv: 1 author: - first_name: Dante full_name: Bonolis, Dante id: 6A459894-5FDD-11E9-AF35-BB24E6697425 last_name: Bonolis - first_name: Timothy D full_name: Browning, Timothy D id: 35827D50-F248-11E8-B48F-1D18A9856A87 last_name: Browning orcid: 0000-0002-8314-0177 - first_name: Zhizhong full_name: Huang, Zhizhong id: 21f1b52f-2fd1-11eb-a347-a4cdb9b18a51 last_name: Huang citation: ama: Bonolis D, Browning TD, Huang Z. Density of rational points on some quadric bundle threefolds. Mathematische Annalen. 2024;390:4123-4207. doi:10.1007/s00208-024-02854-4 apa: Bonolis, D., Browning, T. D., & Huang, Z. (2024). Density of rational points on some quadric bundle threefolds. Mathematische Annalen. Springer Nature. https://doi.org/10.1007/s00208-024-02854-4 chicago: Bonolis, Dante, Timothy D Browning, and Zhizhong Huang. “Density of Rational Points on Some Quadric Bundle Threefolds.” Mathematische Annalen. Springer Nature, 2024. https://doi.org/10.1007/s00208-024-02854-4. ieee: D. Bonolis, T. D. Browning, and Z. Huang, “Density of rational points on some quadric bundle threefolds,” Mathematische Annalen, vol. 390. Springer Nature, pp. 4123–4207, 2024. ista: Bonolis D, Browning TD, Huang Z. 2024. Density of rational points on some quadric bundle threefolds. Mathematische Annalen. 390, 4123–4207. mla: Bonolis, Dante, et al. “Density of Rational Points on Some Quadric Bundle Threefolds.” Mathematische Annalen, vol. 390, Springer Nature, 2024, pp. 4123–207, doi:10.1007/s00208-024-02854-4. short: D. Bonolis, T.D. Browning, Z. Huang, Mathematische Annalen 390 (2024) 4123–4207. corr_author: '1' das_tickbox: '0' date_created: 2024-04-21T22:00:53Z date_published: 2024-11-01T00:00:00Z date_updated: 2026-07-29T09:56:42Z day: '01' ddc: - '510' department: - _id: TiBr doi: 10.1007/s00208-024-02854-4 external_id: arxiv: - '2204.09322' isi: - '001204670500001' file: - access_level: open_access checksum: 5dd51531deb1e4760c38c3c0c7d5aedc content_type: application/pdf creator: dernst date_created: 2025-01-09T09:08:14Z date_updated: 2025-01-09T09:08:14Z file_id: '18796' file_name: 2024_MathAnnalen_Bonolis.pdf file_size: 1019116 relation: main_file success: 1 file_date_updated: 2025-01-09T09:08:14Z has_accepted_license: '1' intvolume: ' 390' isi: 1 language: - iso: eng month: '11' oa: 1 oa_version: Published Version page: 4123-4207 project: - _id: 26AEDAB2-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: P32428 name: New frontiers of the Manin conjecture publication: Mathematische Annalen publication_identifier: eissn: - 1432-1807 issn: - 0025-5831 publication_status: published publisher: Springer Nature quality_controlled: '1' researchdata_availability: no status: public supplementarymaterial: no title: Density of rational points on some quadric bundle threefolds tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 390 year: '2024' ... --- OA_place: publisher OA_type: hybrid PlanS_conform: '1' _id: '18930' abstract: - lang: eng text: "We study sumsets \U0001D49C + ℬ in the set of squares \U0001D4AE (and, more generally, in the set of kth powers \U0001D4AEk, where k ≥2 is an integer). It is known by a result of Gyarmati that \U0001D49C + ℬ ⊂ \U0001D4AEk ∩[1,N] implies that min(|\U0001D49C|,|ℬ|) =Ok(logN). Here, we study how the upper bound on |ℬ| decreases, when the size of |\U0001D49C| increases (or vice versa). In particular, if |\U0001D49C| ≥ Ck1m m(logN)1m , then |ℬ| = Ok(m2logN), for sufficiently large N, a positive integer m and an explicit constant C > 0. For example, with m ∼ loglogN this gives: If |\U0001D49C| ≥ CkloglogN,then |ℬ| = Ok(logN(loglogN)2)." acknowledgement: This manuscript grew out of the second author’s MSc Thesis at Graz University of Technology [34]. C. Elsholtz is supported by a joint FWF-ANR project ArithRand, grant numbers FWF I 4945-N and ANR-20-CE91-0006. Both authors would like to thank Igor Shparlinski for drawing our attention to related character sum estimates. Furthermore, we would like to thank the referee for a careful reading of the paper. article_processing_charge: Yes (via OA deal) article_type: original author: - first_name: Christian full_name: Elsholtz, Christian last_name: Elsholtz - first_name: Lena full_name: Wurzinger, Lena id: 50c57d72-32a8-11ee-aeea-d652094d2ccd last_name: Wurzinger orcid: 0009-0004-5360-0074 citation: ama: Elsholtz C, Wurzinger L. Sumsets in the set of squares. The Quarterly Journal of Mathematics. 2024;75(4):1243-1254. doi:10.1093/qmath/haae044 apa: Elsholtz, C., & Wurzinger, L. (2024). Sumsets in the set of squares. The Quarterly Journal of Mathematics. Oxford University Press. https://doi.org/10.1093/qmath/haae044 chicago: Elsholtz, Christian, and Lena Wurzinger. “Sumsets in the Set of Squares.” The Quarterly Journal of Mathematics. Oxford University Press, 2024. https://doi.org/10.1093/qmath/haae044. ieee: C. Elsholtz and L. Wurzinger, “Sumsets in the set of squares,” The Quarterly Journal of Mathematics, vol. 75, no. 4. Oxford University Press, pp. 1243–1254, 2024. ista: Elsholtz C, Wurzinger L. 2024. Sumsets in the set of squares. The Quarterly Journal of Mathematics. 75(4), 1243–1254. mla: Elsholtz, Christian, and Lena Wurzinger. “Sumsets in the Set of Squares.” The Quarterly Journal of Mathematics, vol. 75, no. 4, Oxford University Press, 2024, pp. 1243–54, doi:10.1093/qmath/haae044. short: C. Elsholtz, L. Wurzinger, The Quarterly Journal of Mathematics 75 (2024) 1243–1254. corr_author: '1' das_tickbox: '0' date_created: 2025-01-28T06:55:31Z date_published: 2024-12-01T00:00:00Z date_updated: 2026-07-29T09:58:28Z day: '01' ddc: - '510' department: - _id: TiBr doi: 10.1093/qmath/haae044 external_id: isi: - '001304396600001' file: - access_level: open_access checksum: 1a06e052761d3f1e873463d6f529dd82 content_type: application/pdf creator: dernst date_created: 2025-01-28T07:03:51Z date_updated: 2025-01-28T07:03:51Z file_id: '18931' file_name: 2024_QuarterlyJourMath_Elsholtz.pdf file_size: 424645 relation: main_file success: 1 file_date_updated: 2025-01-28T07:03:51Z has_accepted_license: '1' intvolume: ' 75' isi: 1 issue: '4' language: - iso: eng month: '12' oa: 1 oa_version: Published Version page: 1243-1254 publication: The Quarterly Journal of Mathematics publication_identifier: eissn: - 1464-3847 issn: - 0033-5606 publication_status: published publisher: Oxford University Press quality_controlled: '1' researchdata_availability: no scopus_import: '1' status: public supplementarymaterial: no title: Sumsets in the set of squares tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 75 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '15312' abstract: - lang: eng text: The question of whether or not a given integral polynomial takes infinitely many square-free values has only been addressed unconditionally for polynomials of degree at most 3. We address this question, on average, for polynomials of arbitrary degree. article_processing_charge: No article_type: original arxiv: 1 author: - first_name: Timothy D full_name: Browning, Timothy D id: 35827D50-F248-11E8-B48F-1D18A9856A87 last_name: Browning orcid: 0000-0002-8314-0177 - first_name: Igor E. full_name: Shparlinski, Igor E. last_name: Shparlinski citation: ama: Browning TD, Shparlinski IE. Square-free values of random polynomials. Journal of Number Theory. 2024;261:220-240. doi:10.1016/j.jnt.2024.02.013 apa: Browning, T. D., & Shparlinski, I. E. (2024). Square-free values of random polynomials. Journal of Number Theory. Elsevier. https://doi.org/10.1016/j.jnt.2024.02.013 chicago: Browning, Timothy D, and Igor E. Shparlinski. “Square-Free Values of Random Polynomials.” Journal of Number Theory. Elsevier, 2024. https://doi.org/10.1016/j.jnt.2024.02.013. ieee: T. D. Browning and I. E. Shparlinski, “Square-free values of random polynomials,” Journal of Number Theory, vol. 261. Elsevier, pp. 220–240, 2024. ista: Browning TD, Shparlinski IE. 2024. Square-free values of random polynomials. Journal of Number Theory. 261, 220–240. mla: Browning, Timothy D., and Igor E. Shparlinski. “Square-Free Values of Random Polynomials.” Journal of Number Theory, vol. 261, Elsevier, 2024, pp. 220–40, doi:10.1016/j.jnt.2024.02.013. short: T.D. Browning, I.E. Shparlinski, Journal of Number Theory 261 (2024) 220–240. corr_author: '1' das_tickbox: '0' date_created: 2024-04-14T22:01:00Z date_published: 2024-08-01T00:00:00Z date_updated: 2026-07-29T09:55:38Z day: '01' ddc: - '510' department: - _id: TiBr doi: 10.1016/j.jnt.2024.02.013 external_id: arxiv: - '2305.15493' isi: - '001220725000001' file: - access_level: open_access checksum: 614032802febde0aa8e904e9a8ef99ab content_type: application/pdf creator: dernst date_created: 2025-01-09T09:00:02Z date_updated: 2025-01-09T09:00:02Z file_id: '18794' file_name: 2024_JourNumberTheory_Browning.pdf file_size: 394850 relation: main_file success: 1 file_date_updated: 2025-01-09T09:00:02Z has_accepted_license: '1' intvolume: ' 261' isi: 1 language: - iso: eng month: '08' oa: 1 oa_version: Published Version page: 220-240 publication: Journal of Number Theory publication_identifier: issn: - 0022-314X publication_status: published publisher: Elsevier quality_controlled: '1' researchdata_availability: no scopus_import: '1' status: public supplementarymaterial: no title: Square-free values of random polynomials tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 261 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '19051' abstract: - lang: eng text: This paper corrects an error in an earlier work of the author. article_processing_charge: Yes (via OA deal) article_type: original author: - first_name: Timothy D full_name: Browning, Timothy D id: 35827D50-F248-11E8-B48F-1D18A9856A87 last_name: Browning orcid: 0000-0002-8314-0177 citation: ama: Browning TD. The polynomial sieve and equal sums of like polynomials. International Mathematics Research Notices. 2024;2024(13):10165-10168. doi:10.1093/imrn/rnae066 apa: Browning, T. D. (2024). The polynomial sieve and equal sums of like polynomials. International Mathematics Research Notices. Oxford University Press. https://doi.org/10.1093/imrn/rnae066 chicago: Browning, Timothy D. “The Polynomial Sieve and Equal Sums of like Polynomials.” International Mathematics Research Notices. Oxford University Press, 2024. https://doi.org/10.1093/imrn/rnae066. ieee: T. D. Browning, “The polynomial sieve and equal sums of like polynomials,” International Mathematics Research Notices, vol. 2024, no. 13. Oxford University Press, pp. 10165–10168, 2024. ista: Browning TD. 2024. The polynomial sieve and equal sums of like polynomials. International Mathematics Research Notices. 2024(13), 10165–10168. mla: Browning, Timothy D. “The Polynomial Sieve and Equal Sums of like Polynomials.” International Mathematics Research Notices, vol. 2024, no. 13, Oxford University Press, 2024, pp. 10165–68, doi:10.1093/imrn/rnae066. short: T.D. Browning, International Mathematics Research Notices 2024 (2024) 10165–10168. corr_author: '1' das_tickbox: '0' date_created: 2025-02-18T07:15:50Z date_published: 2024-07-01T00:00:00Z date_updated: 2026-07-29T09:59:57Z day: '01' ddc: - '510' department: - _id: TiBr doi: 10.1093/imrn/rnae066 external_id: isi: - '001196957300001' file: - access_level: open_access checksum: b625b8adf018d2a97591813c1fc17b96 content_type: application/pdf creator: dernst date_created: 2025-02-18T07:56:36Z date_updated: 2025-02-18T07:56:36Z file_id: '19052' file_name: 2024_IMRN_Browning.pdf file_size: 205750 relation: main_file success: 1 file_date_updated: 2025-02-18T07:56:36Z has_accepted_license: '1' intvolume: ' 2024' isi: 1 issue: '13' language: - iso: eng month: '07' oa: 1 oa_version: Published Version page: 10165-10168 publication: International Mathematics Research Notices publication_identifier: eissn: - 1687-0247 issn: - 1073-7928 publication_status: published publisher: Oxford University Press quality_controlled: '1' related_material: record: - id: '254' relation: earlier_version status: public researchdata_availability: no scopus_import: '1' status: public supplementarymaterial: no title: The polynomial sieve and equal sums of like polynomials tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 2024 year: '2024' ... --- _id: '10018' abstract: - lang: eng text: In order to study integral points of bounded log-anticanonical height on weak del Pezzo surfaces, we classify weak del Pezzo pairs. As a representative example, we consider a quartic del Pezzo surface of singularity type A1 + A3 and prove an analogue of Manin's conjecture for integral points with respect to its singularities and its lines. acknowledgement: The first author was partly supported by grant DE 1646/4-2 of the Deutsche Forschungsgemeinschaft. The second author was partly supported by FWF grant P 32428-N35 and conducted part of this work as a guest at the Institut de Mathématiques de Jussieu–Paris Rive Gauche invited by Antoine Chambert-Loir and funded by DAAD. article_processing_charge: Yes (via OA deal) article_type: original arxiv: 1 author: - first_name: Ulrich full_name: Derenthal, Ulrich last_name: Derenthal - first_name: Florian Alexander full_name: Wilsch, Florian Alexander id: 560601DA-8D36-11E9-A136-7AC1E5697425 last_name: Wilsch orcid: 0000-0001-7302-8256 citation: ama: Derenthal U, Wilsch FA. Integral points on singular del Pezzo surfaces. Journal of the Institute of Mathematics of Jussieu. 2024;23(3):1259-1294. doi:10.1017/S1474748022000482 apa: Derenthal, U., & Wilsch, F. A. (2024). Integral points on singular del Pezzo surfaces. Journal of the Institute of Mathematics of Jussieu. Cambridge University Press. https://doi.org/10.1017/S1474748022000482 chicago: Derenthal, Ulrich, and Florian Alexander Wilsch. “Integral Points on Singular Del Pezzo Surfaces.” Journal of the Institute of Mathematics of Jussieu. Cambridge University Press, 2024. https://doi.org/10.1017/S1474748022000482. ieee: U. Derenthal and F. A. Wilsch, “Integral points on singular del Pezzo surfaces,” Journal of the Institute of Mathematics of Jussieu, vol. 23, no. 3. Cambridge University Press, pp. 1259–1294, 2024. ista: Derenthal U, Wilsch FA. 2024. Integral points on singular del Pezzo surfaces. Journal of the Institute of Mathematics of Jussieu. 23(3), 1259–1294. mla: Derenthal, Ulrich, and Florian Alexander Wilsch. “Integral Points on Singular Del Pezzo Surfaces.” Journal of the Institute of Mathematics of Jussieu, vol. 23, no. 3, Cambridge University Press, 2024, pp. 1259–94, doi:10.1017/S1474748022000482. short: U. Derenthal, F.A. Wilsch, Journal of the Institute of Mathematics of Jussieu 23 (2024) 1259–1294. corr_author: '1' das_tickbox: '0' date_created: 2021-09-15T10:06:48Z date_published: 2024-05-10T00:00:00Z date_updated: 2026-07-29T10:00:51Z day: '10' ddc: - '510' department: - _id: TiBr doi: 10.1017/S1474748022000482 external_id: arxiv: - '2109.06778' isi: - '000881319200001' file: - access_level: open_access checksum: c4698ea12cfe10ef2c6c79880290c7ac content_type: application/pdf creator: dernst date_created: 2024-06-03T08:33:29Z date_updated: 2024-06-03T08:33:29Z file_id: '17102' file_name: 2024_JourMathJussieu_Derenthal.pdf file_size: 592305 relation: main_file success: 1 file_date_updated: 2024-06-03T08:33:29Z has_accepted_license: '1' intvolume: ' 23' isi: 1 issue: '3' keyword: - Integral points - del Pezzo surface - universal torsor - Manin’s conjecture language: - iso: eng month: '05' oa: 1 oa_version: Published Version page: 1259-1294 project: - _id: 26AEDAB2-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: P32428 name: New frontiers of the Manin conjecture publication: Journal of the Institute of Mathematics of Jussieu publication_identifier: eissn: - '1475-3030 ' issn: - 1474-7480 publication_status: published publisher: Cambridge University Press quality_controlled: '1' researchdata_availability: no scopus_import: '1' status: public supplementarymaterial: no title: Integral points on singular del Pezzo surfaces tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 23 year: '2024' ... --- _id: '17447' abstract: - lang: eng text: Let F be a diagonal cubic form over Z in six variables. From the dual variety in the delta method of Duke–Friedlander–Iwaniec and Heath‐Brown, we unconditionally extract a weighted count of certain special integral zeros of F in regions of diameter X - 8 . Heath‐Brown did the same in four variables, but our analysis differs and captures some novel features. We also put forth an axiomatic framework for more general F. acknowledgement: This paper is an important component of the thesis work described in [25]; many of my acknowledgements there apply here as well. I also thank my advisor, Peter Sarnak, for many helpful suggestions and questions on the exposition, references, assumptions, and scope of (various drafts of) the present work. I am also grateful to Trevor Wooley for providing some helpful general comments on special subvarieties and the reference [24]. I thank Tim Browning for inspiring part of the current title of the paper. Finally, thanks are due to the referee for providing many helpful suggestions. This work was partially supported by NSF grant DMS-1802211, and the European Union’s Horizon 2020 research and innovation program under the Marie Skłodowska-Curie Grant AgreementNo. 101034413. article_number: e12975 article_processing_charge: Yes (via OA deal) article_type: original arxiv: 1 author: - first_name: Victor full_name: Wang, Victor id: 76096395-aea4-11ed-a680-ab8ebbd3f1b9 last_name: Wang orcid: 0000-0002-0704-7026 citation: ama: Wang V. Special cubic zeros and the dual variety. Journal of the London Mathematical Society. 2024;110(3). doi:10.1112/jlms.12975 apa: Wang, V. (2024). Special cubic zeros and the dual variety. Journal of the London Mathematical Society. Wiley. https://doi.org/10.1112/jlms.12975 chicago: Wang, Victor. “Special Cubic Zeros and the Dual Variety.” Journal of the London Mathematical Society. Wiley, 2024. https://doi.org/10.1112/jlms.12975. ieee: V. Wang, “Special cubic zeros and the dual variety,” Journal of the London Mathematical Society, vol. 110, no. 3. Wiley, 2024. ista: Wang V. 2024. Special cubic zeros and the dual variety. Journal of the London Mathematical Society. 110(3), e12975. mla: Wang, Victor. “Special Cubic Zeros and the Dual Variety.” Journal of the London Mathematical Society, vol. 110, no. 3, e12975, Wiley, 2024, doi:10.1112/jlms.12975. short: V. Wang, Journal of the London Mathematical Society 110 (2024). corr_author: '1' das_tickbox: '0' date_created: 2024-08-20T08:41:40Z date_published: 2024-08-14T00:00:00Z date_updated: 2026-07-29T10:02:22Z day: '14' ddc: - '512' department: - _id: TiBr doi: 10.1112/jlms.12975 ec_funded: 1 external_id: arxiv: - '2108.03396' isi: - '001310529600001' file: - access_level: open_access checksum: 90437e19f57520b4d66ca62408f6c81e content_type: application/pdf creator: dernst date_created: 2024-08-21T06:36:40Z date_updated: 2024-08-21T06:36:40Z file_id: '17454' file_name: 2024_JourLondonMathSoc_Wang.pdf file_size: 438751 relation: main_file success: 1 file_date_updated: 2024-08-21T06:36:40Z has_accepted_license: '1' intvolume: ' 110' isi: 1 issue: '3' language: - iso: eng month: '08' oa: 1 oa_version: Published Version project: - _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c call_identifier: H2020 grant_number: '101034413' name: 'IST-BRIDGE: International postdoctoral program' publication: Journal of the London Mathematical Society publication_identifier: eissn: - 1469-7750 issn: - 0024-6107 publication_status: published publisher: Wiley quality_controlled: '1' researchdata_availability: no scopus_import: '1' status: public supplementarymaterial: no title: Special cubic zeros and the dual variety tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 110 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '17323' abstract: - lang: eng text: We investigate strong divisibility sequences and produce lower and upper bounds for the density of integers in the sequence that only have (somewhat) large prime factors. We focus on the special cases of Fibonacci numbers and elliptic divisibility sequences, discussing the limitations of our methods. At the end of the paper, there is an appendix by Sandro Bettin on divisor closed sets that we use to study the density of prime terms that appear in strong divisibility sequences. acknowledgement: The authors are very grateful to Andrew Granville, Dimitris Koukoulopoulos, Davide Lombardo,Florian Luca, Igor Shparlinski and Joni Teräväinen for useful comments. While working on thispaper, the first author was supported by a FWF Grant (DOI 10.55776/P36278) and the secondauthor was supported by the European Union’s Horizon 2020 research and innovation programunder the Marie Skłodowska-Curie Grant Agreement Number 101034413. article_number: e12269 article_processing_charge: Yes (via OA deal) article_type: original author: - first_name: Timothy D full_name: Browning, Timothy D id: 35827D50-F248-11E8-B48F-1D18A9856A87 last_name: Browning orcid: 0000-0002-8314-0177 - first_name: Matteo full_name: Verzobio, Matteo id: 7aa8f170-131e-11ed-88e1-a9efd01027cb last_name: Verzobio orcid: 0000-0002-0854-0306 citation: ama: Browning TD, Verzobio M. Strong divisibility sequences and sieve methods. Mathematika. 2024;70(4). doi:10.1112/mtk.12269 apa: Browning, T. D., & Verzobio, M. (2024). Strong divisibility sequences and sieve methods. Mathematika. London Mathematical Society. https://doi.org/10.1112/mtk.12269 chicago: Browning, Timothy D, and Matteo Verzobio. “Strong Divisibility Sequences and Sieve Methods.” Mathematika. London Mathematical Society, 2024. https://doi.org/10.1112/mtk.12269. ieee: T. D. Browning and M. Verzobio, “Strong divisibility sequences and sieve methods,” Mathematika, vol. 70, no. 4. London Mathematical Society, 2024. ista: Browning TD, Verzobio M. 2024. Strong divisibility sequences and sieve methods. Mathematika. 70(4), e12269. mla: Browning, Timothy D., and Matteo Verzobio. “Strong Divisibility Sequences and Sieve Methods.” Mathematika, vol. 70, no. 4, e12269, London Mathematical Society, 2024, doi:10.1112/mtk.12269. short: T.D. Browning, M. Verzobio, Mathematika 70 (2024). corr_author: '1' das_tickbox: '0' date_created: 2024-07-28T22:01:08Z date_published: 2024-10-01T00:00:00Z date_updated: 2026-07-29T10:01:24Z day: '01' ddc: - '510' department: - _id: TiBr doi: 10.1112/mtk.12269 ec_funded: 1 external_id: isi: - '001273912800001' file: - access_level: open_access checksum: 0b1518bdc1a901413005c19202cfa497 content_type: application/pdf creator: dernst date_created: 2025-01-13T11:06:25Z date_updated: 2025-01-13T11:06:25Z file_id: '18842' file_name: 2024_Mathematika_Browning.pdf file_size: 273006 relation: main_file success: 1 file_date_updated: 2025-01-13T11:06:25Z has_accepted_license: '1' intvolume: ' 70' isi: 1 issue: '4' language: - iso: eng month: '10' oa: 1 oa_version: Published Version project: - _id: bd8a4fdc-d553-11ed-ba76-80a0167441a3 grant_number: P36278 name: Rational curves via function field analytic number theory - _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c call_identifier: H2020 grant_number: '101034413' name: 'IST-BRIDGE: International postdoctoral program' publication: Mathematika publication_identifier: eissn: - 2041-7942 issn: - 0025-5793 publication_status: published publisher: London Mathematical Society quality_controlled: '1' researchdata_availability: no scopus_import: '1' status: public supplementarymaterial: no title: Strong divisibility sequences and sieve methods tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 70 year: '2024' ...