---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '17322'
abstract:
- lang: eng
  text: Machine learning interatomic potentials are revolutionizing large-scale, accurate
    atomistic modeling in material science and chemistry. Many potentials use atomic
    cluster expansion or equivariant message-passing frameworks. Such frameworks typically
    use spherical harmonics as angular basis functions, followed by Clebsch-Gordan
    contraction to maintain rotational symmetry. We propose a mathematically equivalent
    and simple alternative that performs all operations in the Cartesian coordinates.
    This approach provides a complete set of polynormially independent features of
    atomic environments while maintaining interaction body orders. Additionally, we
    integrate low-dimensional embeddings of various chemical elements, trainable radial
    channel coupling, and inter-atomic message passing. The resulting potential, named
    Cartesian Atomic Cluster Expansion (CACE), exhibits good accuracy, stability,
    and generalizability. We validate its performance in diverse systems, including
    bulk water, small molecules, and 25-element high-entropy alloys.
acknowledgement: B.C. thanks Ralf Drautz and Ngoc Cuong Nguyen for illuminating discussions.
article_number: '157'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Bingqing
  full_name: Cheng, Bingqing
  id: cbe3cda4-d82c-11eb-8dc7-8ff94289fcc9
  last_name: Cheng
  orcid: 0000-0002-3584-9632
citation:
  ama: Cheng B. Cartesian atomic cluster expansion for machine learning interatomic
    potentials. <i>npj Computational Materials</i>. 2024;10. doi:<a href="https://doi.org/10.1038/s41524-024-01332-4">10.1038/s41524-024-01332-4</a>
  apa: Cheng, B. (2024). Cartesian atomic cluster expansion for machine learning interatomic
    potentials. <i>Npj Computational Materials</i>. Springer Nature. <a href="https://doi.org/10.1038/s41524-024-01332-4">https://doi.org/10.1038/s41524-024-01332-4</a>
  chicago: Cheng, Bingqing. “Cartesian Atomic Cluster Expansion for Machine Learning
    Interatomic Potentials.” <i>Npj Computational Materials</i>. Springer Nature,
    2024. <a href="https://doi.org/10.1038/s41524-024-01332-4">https://doi.org/10.1038/s41524-024-01332-4</a>.
  ieee: B. Cheng, “Cartesian atomic cluster expansion for machine learning interatomic
    potentials,” <i>npj Computational Materials</i>, vol. 10. Springer Nature, 2024.
  ista: Cheng B. 2024. Cartesian atomic cluster expansion for machine learning interatomic
    potentials. npj Computational Materials. 10, 157.
  mla: Cheng, Bingqing. “Cartesian Atomic Cluster Expansion for Machine Learning Interatomic
    Potentials.” <i>Npj Computational Materials</i>, vol. 10, 157, Springer Nature,
    2024, doi:<a href="https://doi.org/10.1038/s41524-024-01332-4">10.1038/s41524-024-01332-4</a>.
  short: B. Cheng, Npj Computational Materials 10 (2024).
corr_author: '1'
das_tickbox: '1'
dataavailabilitystatement: The water dataset is from https://github.com/BingqingCheng/ab-initio-thermodynamics-of-water.
  MD17-ethanol is from http://www.sgdml.org/#datasets. BPA is from ref. 43, downloaded
  from https://github.com/davkovacs/BOTNet-datasets. The HEA25 dataset is from ref.
  45, downloaded from https://archive.materialscloud.org/record/2023.57. The training
  scripts, trained CACE potentials, and MD input files are available at https://github.com/BingqingCheng/cacefit.
date_created: 2024-07-28T22:01:08Z
date_published: 2024-07-18T00:00:00Z
date_updated: 2026-08-07T10:41:14Z
day: '18'
ddc:
- '000'
department:
- _id: BiCh
doi: 10.1038/s41524-024-01332-4
external_id:
  arxiv:
  - '2402.07472'
  isi:
  - '001271730700001'
file:
- access_level: open_access
  checksum: e6b4d1a45a9ef1e9be35b313d96ebd6f
  content_type: application/pdf
  creator: dernst
  date_created: 2025-01-09T12:36:48Z
  date_updated: 2025-01-09T12:36:48Z
  file_id: '18813'
  file_name: 2024_npjComputationalMaterials_Cheng.pdf
  file_size: 1659509
  relation: main_file
  success: 1
file_date_updated: 2025-01-09T12:36:48Z
has_accepted_license: '1'
intvolume: '        10'
isi: 1
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
publication: npj Computational Materials
publication_identifier:
  eissn:
  - 2057-3960
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
researchdata_availability: no
scopus_import: '1'
status: public
supplementarymaterial: no
title: Cartesian atomic cluster expansion for machine learning interatomic potentials
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 10
year: '2024'
...
---
_id: '17278'
abstract:
- lang: eng
  text: An azeotrope is a constant boiling point mixture, and its behavior is important
    for fluid separation processes. Predicting azeotropes from atomistic simulations
    is difficult due to the complexities and convergence problems of Monte Carlo and
    free-energy perturbation techniques. Here, we present a methodology for predicting
    the azeotropes of binary mixtures, which computes the compositional dependence
    of chemical potentials from molecular dynamics simulations using the S0 method
    and employs experimental boiling point and vaporization enthalpy data. Using this
    methodology, we reproduce the azeotropes, or lack thereof, in five case studies,
    including ethanol/water, ethanol/isooctane, methanol/water, hydrazine/water, and
    acetone/chloroform mixtures. We find that it is crucial to use the experimental
    boiling point and vaporization enthalpy for reliable azeotrope predictions, as
    empirical force fields are not accurate enough for these quantities. Finally,
    we use regular solution models to rationalize the azeotropes and reveal that they
    tend to form when the mixture components have similar boiling points and strong
    interactions.
acknowledgement: B.C. thanks Alessandro Laio, who introduced the phenomenon of azeotrope
  and suggested using the S0 method to compute it. B.C. and X.W. thank Felix Wodaczek
  for the insightful comments and suggestions on the manuscript. B.C. and X.W. acknowledge
  the resources provided by the Cambridge Tier-2 system operated by the University
  of Cambridge Research Computing Service, funded by EPSRC Tier-2 capital (Grant No.
  EP/P020259/1).
article_number: '034111'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Xiaoyu
  full_name: Wang, Xiaoyu
  id: 8dff9c62-32b0-11ee-9fa8-fc73025e10f3
  last_name: Wang
- first_name: Bingqing
  full_name: Cheng, Bingqing
  id: cbe3cda4-d82c-11eb-8dc7-8ff94289fcc9
  last_name: Cheng
  orcid: 0000-0002-3584-9632
citation:
  ama: Wang X, Cheng B. Integrating molecular dynamics simulations and experimental
    data for azeotrope predictions in binary mixtures. <i>Journal of Chemical Physics</i>.
    2024;161(3). doi:<a href="https://doi.org/10.1063/5.0217232">10.1063/5.0217232</a>
  apa: Wang, X., &#38; Cheng, B. (2024). Integrating molecular dynamics simulations
    and experimental data for azeotrope predictions in binary mixtures. <i>Journal
    of Chemical Physics</i>. AIP Publishing. <a href="https://doi.org/10.1063/5.0217232">https://doi.org/10.1063/5.0217232</a>
  chicago: Wang, Xiaoyu, and Bingqing Cheng. “Integrating Molecular Dynamics Simulations
    and Experimental Data for Azeotrope Predictions in Binary Mixtures.” <i>Journal
    of Chemical Physics</i>. AIP Publishing, 2024. <a href="https://doi.org/10.1063/5.0217232">https://doi.org/10.1063/5.0217232</a>.
  ieee: X. Wang and B. Cheng, “Integrating molecular dynamics simulations and experimental
    data for azeotrope predictions in binary mixtures,” <i>Journal of Chemical Physics</i>,
    vol. 161, no. 3. AIP Publishing, 2024.
  ista: Wang X, Cheng B. 2024. Integrating molecular dynamics simulations and experimental
    data for azeotrope predictions in binary mixtures. Journal of Chemical Physics.
    161(3), 034111.
  mla: Wang, Xiaoyu, and Bingqing Cheng. “Integrating Molecular Dynamics Simulations
    and Experimental Data for Azeotrope Predictions in Binary Mixtures.” <i>Journal
    of Chemical Physics</i>, vol. 161, no. 3, 034111, AIP Publishing, 2024, doi:<a
    href="https://doi.org/10.1063/5.0217232">10.1063/5.0217232</a>.
  short: X. Wang, B. Cheng, Journal of Chemical Physics 161 (2024).
corr_author: '1'
das_tickbox: '1'
dataavailabilitystatement: All simulation setups, analysis scripts, and raw data in
  the study are available in the SI repository https://github.com/Xiaoyu-Wang-Stone/Azeotrope_S0.
date_created: 2024-07-21T22:01:00Z
date_published: 2024-07-14T00:00:00Z
date_updated: 2026-08-07T10:38:59Z
day: '14'
department:
- _id: BiCh
- _id: GradSch
doi: 10.1063/5.0217232
external_id:
  arxiv:
  - '2405.02216'
  isi:
  - '001281819100016'
  pmid:
  - '39007379'
intvolume: '       161'
isi: 1
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2405.02216
month: '07'
oa: 1
oa_version: Preprint
pmid: 1
publication: Journal of Chemical Physics
publication_identifier:
  eissn:
  - 1089-7690
  issn:
  - 0021-9606
publication_status: published
publisher: AIP Publishing
quality_controlled: '1'
related_material:
  link:
  - relation: software
    url: https://github.com/Xiaoyu-Wang-Stone/Azeotrope_S0
researchdata_availability: no
scopus_import: '1'
status: public
supplementarymaterial: no
title: Integrating molecular dynamics simulations and experimental data for azeotrope
  predictions in binary mixtures
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 161
year: '2024'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '22513'
abstract:
- lang: eng
  text: High elevation headwater catchments are complex hydrological systems that
    seasonally buffer water and release it in the form of snow and ice melt, modulating
    downstream runoff regimes and water availability. In High Mountain Asia (HMA),
    where a wide range of climates from semi-arid to monsoonal exist, the importance
    of the cryospheric contributions to the water budget varies with the amount and
    seasonal distribution of precipitation. Losses due to evapotranspiration and sublimation
    are to date largely unquantified components of the water budget in such catchments,
    although they can be comparable in magnitude to glacier melt contributions to
    streamflow. Here, we simulate the hydrology of three high elevation headwater
    catchments in distinct climates in HMA over 10 years using an ecohydrological
    model geared towards high-mountain areas including snow and glaciers, forced with
    reanalysis data. Our results show that evapotranspiration and sublimation together
    are most important at the semi-arid site, Kyzylsu, on the northernmost slopes
    of the Pamir mountain range. Here, the evaporative loss amounts to 28% of the
    water throughput, which we define as the total water added to, or removed from
    the water balance within a year. In comparison, evaporative losses are 19% at
    the Central Himalayan site Langtang and 13% at the wettest site, 24 K, on the
    Southeastern Tibetan Plateau. At the three sites, respectively, sublimation removes
    15%, 13% and 6% of snowfall, while evapotranspiration removes the equivalent of
    76%, 28% and 19% of rainfall. In absolute terms, and across a comparable elevation
    range, the highest ET flux is 413 mm yr−1 at 24 K, while the highest sublimation
    flux is 91 mm yr−1 at Kyzylsu. During warm and dry years, glacier melt was found
    to only partially compensate for the annual supply deficit.
article_number: '044057'
article_processing_charge: No
article_type: letter_note
author:
- first_name: S
  full_name: Fugger, S
  last_name: Fugger
- first_name: T E
  full_name: Shaw, T E
  last_name: Shaw
- first_name: A
  full_name: Jouberton, A
  last_name: Jouberton
- first_name: E S
  full_name: Miles, E S
  last_name: Miles
- first_name: P
  full_name: Buri, P
  last_name: Buri
- first_name: M
  full_name: McCarthy, M
  last_name: McCarthy
- first_name: C
  full_name: Fyffe, C
  last_name: Fyffe
- first_name: Simone
  full_name: Fatichi, Simone
  id: cf8e546b-a9b0-11f0-a43b-aa89ed1b56d6
  last_name: Fatichi
- first_name: M
  full_name: Kneib, M
  last_name: Kneib
- first_name: Peter
  full_name: Molnar, Peter
  last_name: Molnar
- first_name: F
  full_name: Pellicciotti, F
  last_name: Pellicciotti
citation:
  ama: Fugger S, Shaw TE, Jouberton A, et al. Hydrological regimes and evaporative
    flux partitioning at the climatic ends of high mountain Asia. <i>Environmental
    Research Letters</i>. 2024;19(4). doi:<a href="https://doi.org/10.1088/1748-9326/ad25a0">10.1088/1748-9326/ad25a0</a>
  apa: Fugger, S., Shaw, T. E., Jouberton, A., Miles, E. S., Buri, P., McCarthy, M.,
    … Pellicciotti, F. (2024). Hydrological regimes and evaporative flux partitioning
    at the climatic ends of high mountain Asia. <i>Environmental Research Letters</i>.
    IOP Publishing. <a href="https://doi.org/10.1088/1748-9326/ad25a0">https://doi.org/10.1088/1748-9326/ad25a0</a>
  chicago: Fugger, S, T E Shaw, A Jouberton, E S Miles, P Buri, M McCarthy, C Fyffe,
    et al. “Hydrological Regimes and Evaporative Flux Partitioning at the Climatic
    Ends of High Mountain Asia.” <i>Environmental Research Letters</i>. IOP Publishing,
    2024. <a href="https://doi.org/10.1088/1748-9326/ad25a0">https://doi.org/10.1088/1748-9326/ad25a0</a>.
  ieee: S. Fugger <i>et al.</i>, “Hydrological regimes and evaporative flux partitioning
    at the climatic ends of high mountain Asia,” <i>Environmental Research Letters</i>,
    vol. 19, no. 4. IOP Publishing, 2024.
  ista: Fugger S, Shaw TE, Jouberton A, Miles ES, Buri P, McCarthy M, Fyffe C, Fatichi
    S, Kneib M, Molnar P, Pellicciotti F. 2024. Hydrological regimes and evaporative
    flux partitioning at the climatic ends of high mountain Asia. Environmental Research
    Letters. 19(4), 044057.
  mla: Fugger, S., et al. “Hydrological Regimes and Evaporative Flux Partitioning
    at the Climatic Ends of High Mountain Asia.” <i>Environmental Research Letters</i>,
    vol. 19, no. 4, 044057, IOP Publishing, 2024, doi:<a href="https://doi.org/10.1088/1748-9326/ad25a0">10.1088/1748-9326/ad25a0</a>.
  short: S. Fugger, T.E. Shaw, A. Jouberton, E.S. Miles, P. Buri, M. McCarthy, C.
    Fyffe, S. Fatichi, M. Kneib, P. Molnar, F. Pellicciotti, Environmental Research
    Letters 19 (2024).
das_tickbox: '1'
date_created: 2026-07-27T12:30:24Z
date_published: 2024-04-09T00:00:00Z
date_updated: 2026-08-07T11:03:46Z
day: '09'
doi: 10.1088/1748-9326/ad25a0
extern: '1'
intvolume: '        19'
issue: '4'
keyword:
- Glacio-hydrology
- High mountain Asia
- High mountain hydrology
- Ecohydrology
- Landsurface modelling
- Remote sensing hydrology
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1088/1748-9326/ad25a0
month: '04'
oa: 1
oa_version: Published Version
publication: Environmental Research Letters
publication_identifier:
  eissn:
  - 1748-9326
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Hydrological regimes and evaporative flux partitioning at the climatic ends
  of high mountain Asia
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 19
year: '2024'
...
---
APC_amount: 3062,93 EUR
OA_place: publisher
OA_type: hybrid
_id: '18525'
abstract:
- lang: eng
  text: As their statistical power grows, genome-wide association studies (GWAS) have
    identified an increasing number of loci underlying quantitative traits of interest.
    These loci are scattered throughout the genome and are individually responsible
    only for small fractions of the total heritable trait variance. The recently proposed
    omnigenic model provides a conceptual framework to explain these observations
    by postulating that numerous distant loci contribute to each complex trait via
    effect propagation through intracellular regulatory networks. We formalize this
    conceptual framework by proposing the “quantitative omnigenic model” (QOM), a
    statistical model that combines prior knowledge of the regulatory network topology
    with genomic data. By applying our model to gene expression traits in yeast, we
    demonstrate that QOM achieves similar gene expression prediction performance to
    traditional GWAS with hundreds of times less parameters, while simultaneously
    extracting candidate causal and quantitative chains of effect propagation through
    the regulatory network for every individual gene. We estimate the fraction of
    heritable trait variance in cis- and in trans-, break the latter down by effect
    propagation order, assess the trans- variance not attributable to transcriptional
    regulation, and show that QOM correctly accounts for the low-dimensional structure
    of gene expression covariance. We furthermore demonstrate the relevance of QOM
    for systems biology, by employing it as a statistical test for the quality of
    regulatory network reconstructions, and linking it to the propagation of nontranscriptional
    (including environmental) effects.
acknowledgement: N.R.acknowledges the support of the Austrian Academy of Sciences
  through the Doctoral Fellowship Programme (DOC) of the Austrian Academy of Sciences
  26917. M.H. and G.T. were supported in part by the Human Frontiers Science Program
  Grant RGP0034/2018. We thank Nicholas H. Barton, Fyodor Kondrashov, and Matthew
  R. Robinson for fruitful discussions.
article_number: e2402340121
article_processing_charge: Yes
article_type: original
author:
- first_name: Natalia
  full_name: Ruzickova, Natalia
  id: D2761128-D73D-11E9-A1BF-BA0DE6697425
  last_name: Ruzickova
- first_name: Michal
  full_name: Hledik, Michal
  id: 4171253A-F248-11E8-B48F-1D18A9856A87
  last_name: Hledik
- first_name: Gašper
  full_name: Tkačik, Gašper
  id: 3D494DCA-F248-11E8-B48F-1D18A9856A87
  last_name: Tkačik
  orcid: 0000-0002-6699-1455
citation:
  ama: Ruzickova N, Hledik M, Tkačik G. Quantitative omnigenic model discovers interpretable
    genome-wide associations. <i>Proceedings of the National Academy of Sciences of
    the United States of America</i>. 2024;121(44). doi:<a href="https://doi.org/10.1073/pnas.2402340121">10.1073/pnas.2402340121</a>
  apa: Ruzickova, N., Hledik, M., &#38; Tkačik, G. (2024). Quantitative omnigenic
    model discovers interpretable genome-wide associations. <i>Proceedings of the
    National Academy of Sciences of the United States of America</i>. National Academy
    of Sciences. <a href="https://doi.org/10.1073/pnas.2402340121">https://doi.org/10.1073/pnas.2402340121</a>
  chicago: Ruzickova, Natalia, Michal Hledik, and Gašper Tkačik. “Quantitative Omnigenic
    Model Discovers Interpretable Genome-Wide Associations.” <i>Proceedings of the
    National Academy of Sciences of the United States of America</i>. National Academy
    of Sciences, 2024. <a href="https://doi.org/10.1073/pnas.2402340121">https://doi.org/10.1073/pnas.2402340121</a>.
  ieee: N. Ruzickova, M. Hledik, and G. Tkačik, “Quantitative omnigenic model discovers
    interpretable genome-wide associations,” <i>Proceedings of the National Academy
    of Sciences of the United States of America</i>, vol. 121, no. 44. National Academy
    of Sciences, 2024.
  ista: Ruzickova N, Hledik M, Tkačik G. 2024. Quantitative omnigenic model discovers
    interpretable genome-wide associations. Proceedings of the National Academy of
    Sciences of the United States of America. 121(44), e2402340121.
  mla: Ruzickova, Natalia, et al. “Quantitative Omnigenic Model Discovers Interpretable
    Genome-Wide Associations.” <i>Proceedings of the National Academy of Sciences
    of the United States of America</i>, vol. 121, no. 44, e2402340121, National Academy
    of Sciences, 2024, doi:<a href="https://doi.org/10.1073/pnas.2402340121">10.1073/pnas.2402340121</a>.
  short: N. Ruzickova, M. Hledik, G. Tkačik, Proceedings of the National Academy of
    Sciences of the United States of America 121 (2024).
corr_author: '1'
date_created: 2024-11-10T23:01:59Z
date_published: 2024-10-29T00:00:00Z
date_updated: 2026-08-10T07:47:55Z
day: '29'
ddc:
- '570'
department:
- _id: GaTk
- _id: NiBa
doi: 10.1073/pnas.2402340121
external_id:
  isi:
  - '001349462600001'
  pmid:
  - '39441639'
file:
- access_level: open_access
  checksum: d930e2ccf9ec900c7d7509a78cfb3564
  content_type: application/pdf
  creator: dernst
  date_created: 2024-11-11T09:31:00Z
  date_updated: 2024-11-11T09:31:00Z
  file_id: '18536'
  file_name: 2024_PNAS_Ruzickova.pdf
  file_size: 25529709
  relation: main_file
  success: 1
file_date_updated: 2024-11-11T09:31:00Z
has_accepted_license: '1'
intvolume: '       121'
isi: 1
issue: '44'
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 7bec9174-9f16-11ee-852c-ded9fe5f810e
  name: Collective behaviour of cells in pancreatic Islets of Langerhans
- _id: 2665AAFE-B435-11E9-9278-68D0E5697425
  grant_number: RGP0034/2018
  name: Can evolution minimize spurious signaling crosstalk to reach optimal performance?
publication: Proceedings of the National Academy of Sciences of the United States
  of America
publication_identifier:
  eissn:
  - 1091-6490
  issn:
  - 0027-8424
publication_status: published
publisher: National Academy of Sciences
quality_controlled: '1'
related_material:
  record:
  - id: '20357'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Quantitative omnigenic model discovers interpretable genome-wide associations
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 121
year: '2024'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '22553'
abstract:
- lang: eng
  text: Tidal freshwater marshes are threatened by seawater intrusion globally due
    to freshwater discharge reduction and sea-level rise. However, terrestrial nitrate
    (NO3−) transport responding to seawater intrusion remains poorly understood in
    tidal marshes. After validation against laboratory experiments, numerical simulations
    were conducted to analyze seawater intrusion effects on terrestrial NO3− transport
    and transformation in tidal marsh aquifers. Results reveal that seawater intrusion
    noticeably affects NO3− transport from the marsh aquifer to the tidal creek. Seawater
    intrusion results in an upper saline plume and a saltwater wedge within the aquifer,
    which markedly narrows the discharge outlet width of the NO3− plume and intensifies
    the peak NO3− flux across the creek bank. Consequently, both the NO3− removal
    efficiency and total nitrogen gas load to the creek decrease substantially after
    seawater intrusion. This is because the reduction of the transit time and the
    mixing zone width of the NO3− plume after seawater intrusion weakens denitrification.
    Sensitivity analyses indicate that the difference of the NO3− removal efficiency
    before and after seawater intrusion depends on soil properties. A larger unsaturated
    flow effect, saturated hydraulic conductivity or effective porosity leads to a
    greater difference of the NO3− removal efficiency before and after seawater intrusion.
    The predicted decrease of the NO3− removal efficiency after seawater intrusion
    is consistent with existing field data.
article_number: e2024WR038107
article_processing_charge: No
article_type: original
author:
- first_name: Zhaoyang
  full_name: Luo, Zhaoyang
  last_name: Luo
- first_name: Jun
  full_name: Kong, Jun
  last_name: Kong
- first_name: Xiayang
  full_name: Yu, Xiayang
  last_name: Yu
- first_name: Chao
  full_name: Gao, Chao
  last_name: Gao
- first_name: D. A.
  full_name: Barry, D. A.
  last_name: Barry
- first_name: Simone
  full_name: Fatichi, Simone
  id: cf8e546b-a9b0-11f0-a43b-aa89ed1b56d6
  last_name: Fatichi
citation:
  ama: Luo Z, Kong J, Yu X, Gao C, Barry DA, Fatichi S. Seawater intrusion inhibits
    nitrate removal in tidal marsh aquifers. <i>Water Resources Research</i>. 2024;60(9).
    doi:<a href="https://doi.org/10.1029/2024wr038107">10.1029/2024wr038107</a>
  apa: Luo, Z., Kong, J., Yu, X., Gao, C., Barry, D. A., &#38; Fatichi, S. (2024).
    Seawater intrusion inhibits nitrate removal in tidal marsh aquifers. <i>Water
    Resources Research</i>. American Geophysical Union. <a href="https://doi.org/10.1029/2024wr038107">https://doi.org/10.1029/2024wr038107</a>
  chicago: Luo, Zhaoyang, Jun Kong, Xiayang Yu, Chao Gao, D. A. Barry, and Simone
    Fatichi. “Seawater Intrusion Inhibits Nitrate Removal in Tidal Marsh Aquifers.”
    <i>Water Resources Research</i>. American Geophysical Union, 2024. <a href="https://doi.org/10.1029/2024wr038107">https://doi.org/10.1029/2024wr038107</a>.
  ieee: Z. Luo, J. Kong, X. Yu, C. Gao, D. A. Barry, and S. Fatichi, “Seawater intrusion
    inhibits nitrate removal in tidal marsh aquifers,” <i>Water Resources Research</i>,
    vol. 60, no. 9. American Geophysical Union, 2024.
  ista: Luo Z, Kong J, Yu X, Gao C, Barry DA, Fatichi S. 2024. Seawater intrusion
    inhibits nitrate removal in tidal marsh aquifers. Water Resources Research. 60(9),
    e2024WR038107.
  mla: Luo, Zhaoyang, et al. “Seawater Intrusion Inhibits Nitrate Removal in Tidal
    Marsh Aquifers.” <i>Water Resources Research</i>, vol. 60, no. 9, e2024WR038107,
    American Geophysical Union, 2024, doi:<a href="https://doi.org/10.1029/2024wr038107">10.1029/2024wr038107</a>.
  short: Z. Luo, J. Kong, X. Yu, C. Gao, D.A. Barry, S. Fatichi, Water Resources Research
    60 (2024).
das_tickbox: '1'
date_created: 2026-07-27T12:30:24Z
date_published: 2024-09-01T00:00:00Z
date_updated: 2026-08-10T11:59:23Z
day: '01'
doi: 10.1029/2024wr038107
extern: '1'
intvolume: '        60'
issue: '9'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1029/2024WR038107
month: '09'
oa: 1
oa_version: Published Version
publication: Water Resources Research
publication_identifier:
  eissn:
  - 1944-7973
  issn:
  - 0043-1397
publication_status: published
publisher: American Geophysical Union
quality_controlled: '1'
scopus_import: '1'
status: public
title: Seawater intrusion inhibits nitrate removal in tidal marsh aquifers
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 60
year: '2024'
...
---
OA_place: publisher
OA_type: hybrid
_id: '22511'
abstract:
- lang: eng
  text: Wildfires are increasing in frequency, intensity, and extent globally due
    to climate change and they can alter forest composition, structure, and function.
    The destruction and subsequent regrowth of young vegetation can modify the ecosystem
    evapotranspiration and downstream water availability. However, the response of
    forest recovery on hydrology is not well known with even the sign of evapotranspiration
    and water yield changes following forest fires being uncertain across the globe.
    Here, we quantify the effects of forest regrowth after catastrophic wildfires
    on evapotranspiration and runoff in the world's tallest angiosperm forest (Eucalyptus
    regnans) in Australia. We combine eddy covariance measurements including pre-
    and post-fire periods, mechanistic ecohydrological modeling and then extend the
    analysis spatially to multiple fires in eucalypt-dominated forests in south-eastern
    Australia by utilizing remote sensing. We find a fast recovery of evapotranspiration
    which reaches and exceeds pre-fire values within 2 years after the bushfire, a
    result confirmed by eddy covariance data, remote sensing, and modeling. Such a
    fast evapotranspiration recovery is likely generalizable to tall eucalypt forests
    in south-eastern Australia as shown by remote sensing. Once climate variability
    is discounted, ecohydrological modeling shows evapotranspiration rates from the
    recovering forest which reach peak values of +20% evapotranspiration 3 years post-fire.
    As a result, modeled runoff decreases substantially. Contrary to previous research,
    we find that the increase in modeled evapotranspiration is largely caused by the
    aerodynamic effects of a much shorter forest height leading to higher surface
    temperature, higher humidity gradients and therefore increased transpiration.
    However, increases in evapotranspiration as well as decreases in runoff caused
    by the young forest are constrained by energy and water limitations. Our result
    of an increase in evapotranspiration due to aerodynamic warming in a shorter forest
    after wildfires could occur in many parts of the world experiencing forest disturbances.
article_number: e16995
article_processing_charge: No
article_type: original
author:
- first_name: Naika
  full_name: Meili, Naika
  last_name: Meili
- first_name: Jason
  full_name: Beringer, Jason
  last_name: Beringer
- first_name: Jiacheng
  full_name: Zhao, Jiacheng
  last_name: Zhao
- first_name: Simone
  full_name: Fatichi, Simone
  id: cf8e546b-a9b0-11f0-a43b-aa89ed1b56d6
  last_name: Fatichi
citation:
  ama: Meili N, Beringer J, Zhao J, Fatichi S. Aerodynamic effects cause higher forest
    evapotranspiration and water yield reductions after wildfires in tall forests.
    <i>Global Change Biology</i>. 2024;30(1). doi:<a href="https://doi.org/10.1111/gcb.16995">10.1111/gcb.16995</a>
  apa: Meili, N., Beringer, J., Zhao, J., &#38; Fatichi, S. (2024). Aerodynamic effects
    cause higher forest evapotranspiration and water yield reductions after wildfires
    in tall forests. <i>Global Change Biology</i>. Wiley. <a href="https://doi.org/10.1111/gcb.16995">https://doi.org/10.1111/gcb.16995</a>
  chicago: Meili, Naika, Jason Beringer, Jiacheng Zhao, and Simone Fatichi. “Aerodynamic
    Effects Cause Higher Forest Evapotranspiration and Water Yield Reductions after
    Wildfires in Tall Forests.” <i>Global Change Biology</i>. Wiley, 2024. <a href="https://doi.org/10.1111/gcb.16995">https://doi.org/10.1111/gcb.16995</a>.
  ieee: N. Meili, J. Beringer, J. Zhao, and S. Fatichi, “Aerodynamic effects cause
    higher forest evapotranspiration and water yield reductions after wildfires in
    tall forests,” <i>Global Change Biology</i>, vol. 30, no. 1. Wiley, 2024.
  ista: Meili N, Beringer J, Zhao J, Fatichi S. 2024. Aerodynamic effects cause higher
    forest evapotranspiration and water yield reductions after wildfires in tall forests.
    Global Change Biology. 30(1), e16995.
  mla: Meili, Naika, et al. “Aerodynamic Effects Cause Higher Forest Evapotranspiration
    and Water Yield Reductions after Wildfires in Tall Forests.” <i>Global Change
    Biology</i>, vol. 30, no. 1, e16995, Wiley, 2024, doi:<a href="https://doi.org/10.1111/gcb.16995">10.1111/gcb.16995</a>.
  short: N. Meili, J. Beringer, J. Zhao, S. Fatichi, Global Change Biology 30 (2024).
das_tickbox: '1'
date_created: 2026-07-27T12:30:24Z
date_published: 2024-01-01T00:00:00Z
date_updated: 2026-08-11T05:51:07Z
day: '01'
doi: 10.1111/gcb.16995
extern: '1'
external_id:
  pmid:
  - '37916642'
intvolume: '        30'
issue: '1'
keyword:
- Aerodynamic effects
- Bushfires Australia
- Ecohydrological modeling
- Eddy covariancemeasurements
- Eucalyptus regnans
- Forest evapotranspiration
- Forest recovery
- Mountain Ash
- TERN OzFlux
- Wildfires
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1111/gcb.16995
month: '01'
oa: 1
oa_version: Published Version
pmid: 1
publication: Global Change Biology
publication_identifier:
  eissn:
  - 1365-2486
  issn:
  - 1354-1013
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Aerodynamic effects cause higher forest evapotranspiration and water yield
  reductions after wildfires in tall forests
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 30
year: '2024'
...
---
OA_place: publisher
OA_type: hybrid
_id: '17052'
abstract:
- lang: eng
  text: Production of thermoelectric materials from solution-processed particles involves
    the synthesis of particles, their purification and densification into pelletized
    material. Chemical changes that occur during each one of these steps render them
    performance determining. Particularly the purification steps, bypassed in conventional
    solid-state synthesis, are the cause for large discrepancies among similar solution-processed
    materials. In present work, the investigation focuses on a water-based surfactant
    free solution synthesis of SnSe, a highly relevant thermoelectric material. We
    show and rationalize that the number of leaching steps, purification solvent,
    annealing, and annealing atmosphere have significant influence on the Sn : Se
    ratio and impurity content in the powder. Such compositional changes that are
    undetectable by conventional characterization techniques lead to distinct consolidated
    materials with different types and concentration of defects. Additionally, the
    profound effect on their transport properties is demonstrated. We emphasize that
    understanding the chemistry and identifying key chemical species and their role
    throughout the process is paramount for optimizing material performance. Furthermore,
    we aim to demonstrate the necessity of comprehensive reporting of these steps
    as a standard practice to ensure material reproducibility.
acknowledged_ssus:
- _id: EM-Fac
- _id: NMR
- _id: LifeSc
acknowledgement: ISTA and the Werner Siemens Foundation financially supported this
  work. The Scientific Service Units (SSU) of ISTA supported this research through
  resources provided by the Electron Microscopy Facility (EMF), NMR Facility and the
  Lab Support Facility (LSF). Dr. Krishnendu Maji at ISTA aided in this work through
  XRD analysis of the crystal phase of SnSe. Y.L. acknowledges funding from the European
  Union's Horizon 2020 research and innovation program under the Marie Sklodowska-Curie
  grant agreement No. 754411, the National Natural Science Foundation of China (NSFC)
  (Grants No. 22209034). M.C. received funding from the European Union's Horizon 2020
  research and innovation program under the Marie Skłodowska-Curie Grant Agreement
  No. 665385.
article_number: e202402628
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Christine
  full_name: Fiedler, Christine
  id: bd3fceba-dc74-11ea-a0a7-c17f71817366
  last_name: Fiedler
- first_name: Mariano
  full_name: Calcabrini, Mariano
  id: 45D7531A-F248-11E8-B48F-1D18A9856A87
  last_name: Calcabrini
  orcid: 0000-0003-4566-5877
- first_name: Yu
  full_name: Liu, Yu
  id: 2A70014E-F248-11E8-B48F-1D18A9856A87
  last_name: Liu
  orcid: 0000-0001-7313-6740
- first_name: Maria
  full_name: Ibáñez, Maria
  id: 43C61214-F248-11E8-B48F-1D18A9856A87
  last_name: Ibáñez
  orcid: 0000-0001-5013-2843
citation:
  ama: Fiedler C, Calcabrini M, Liu Y, Ibáñez M. Unveiling crucial chemical processing
    parameters influencing the performance of solution-processed inorganic thermoelectric
    materials. <i>Angewandte Chemie International Edition</i>. 2024;63(25). doi:<a
    href="https://doi.org/10.1002/anie.202402628">10.1002/anie.202402628</a>
  apa: Fiedler, C., Calcabrini, M., Liu, Y., &#38; Ibáñez, M. (2024). Unveiling crucial
    chemical processing parameters influencing the performance of solution-processed
    inorganic thermoelectric materials. <i>Angewandte Chemie International Edition</i>.
    Wiley. <a href="https://doi.org/10.1002/anie.202402628">https://doi.org/10.1002/anie.202402628</a>
  chicago: Fiedler, Christine, Mariano Calcabrini, Yu Liu, and Maria Ibáñez. “Unveiling
    Crucial Chemical Processing Parameters Influencing the Performance of Solution-Processed
    Inorganic Thermoelectric Materials.” <i>Angewandte Chemie International Edition</i>.
    Wiley, 2024. <a href="https://doi.org/10.1002/anie.202402628">https://doi.org/10.1002/anie.202402628</a>.
  ieee: C. Fiedler, M. Calcabrini, Y. Liu, and M. Ibáñez, “Unveiling crucial chemical
    processing parameters influencing the performance of solution-processed inorganic
    thermoelectric materials,” <i>Angewandte Chemie International Edition</i>, vol.
    63, no. 25. Wiley, 2024.
  ista: Fiedler C, Calcabrini M, Liu Y, Ibáñez M. 2024. Unveiling crucial chemical
    processing parameters influencing the performance of solution-processed inorganic
    thermoelectric materials. Angewandte Chemie International Edition. 63(25), e202402628.
  mla: Fiedler, Christine, et al. “Unveiling Crucial Chemical Processing Parameters
    Influencing the Performance of Solution-Processed Inorganic Thermoelectric Materials.”
    <i>Angewandte Chemie International Edition</i>, vol. 63, no. 25, e202402628, Wiley,
    2024, doi:<a href="https://doi.org/10.1002/anie.202402628">10.1002/anie.202402628</a>.
  short: C. Fiedler, M. Calcabrini, Y. Liu, M. Ibáñez, Angewandte Chemie International
    Edition 63 (2024).
corr_author: '1'
das_tickbox: '1'
date_created: 2024-05-26T22:00:58Z
date_published: 2024-06-17T00:00:00Z
date_updated: 2026-08-11T12:39:15Z
day: '17'
ddc:
- '540'
department:
- _id: MaIb
doi: 10.1002/anie.202402628
ec_funded: 1
external_id:
  isi:
  - '001223768400001'
  pmid:
  - '38623865'
file:
- access_level: open_access
  checksum: 1572a0f4d2df55751761efeb2d11c7fc
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  creator: dernst
  date_created: 2025-01-09T09:12:07Z
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  file_size: 16347226
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has_accepted_license: '1'
intvolume: '        63'
isi: 1
issue: '25'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
- _id: 2564DBCA-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '665385'
  name: International IST Doctoral Program
- _id: 9B8F7476-BA93-11EA-9121-9846C619BF3A
  name: 'HighTE: The Werner Siemens Laboratory for the High Throughput Discovery of
    Semiconductors for Waste Heat Recovery'
publication: Angewandte Chemie International Edition
publication_identifier:
  eissn:
  - 1521-3773
  issn:
  - 1433-7851
publication_status: published
publisher: Wiley
quality_controlled: '1'
related_material:
  record:
  - id: '22626'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Unveiling crucial chemical processing parameters influencing the performance
  of solution-processed inorganic thermoelectric materials
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 63
year: '2024'
...
---
APC_amount: 4394,84 EUR
OA_place: publisher
OA_type: hybrid
_id: '17124'
abstract:
- lang: eng
  text: 'In recent years, solution processes have gained considerable traction as
    a cost-effective and scalable method to produce high-performance thermoelectric
    materials. The process entails a series of critical steps: synthesis, purification,
    thermal treatments, and consolidation, each playing a pivotal role in determining
    performance, stability, and reproducibility. We have noticed a need for more comprehensive
    details for each of the described steps in most published works. Recognizing the
    significance of detailed synthetic protocols, we describe here the approach used
    to synthesize and characterize one of the highest-performing polycrystalline p-type
    SnSe. In particular, we report the synthesis of SnSe particles in water and the
    subsequent surface treatment with CdSe molecular complexes that yields CdSe-SnSe
    nanocomposites upon consolidation. Moreover, the surface treatment inhibits grain
    growth through Zenner pinning of secondary phase CdSe nanoparticles and enhances
    defect formation at different length scales. The enhanced complexity in the CdSe-SnSe
    nanocomposite microstructure with respect to SnSe promotes phonon scattering and
    thereby significantly reduces the thermal conductivity. Such surface engineering
    provides opportunities in solution processing for introducing and controlling
    defects, making it possible to optimize the transport properties and attain a
    high thermoelectric figure of merit.'
acknowledged_ssus:
- _id: EM-Fac
- _id: LifeSc
acknowledgement: The Scientific Service Units (SSU) of ISTA supported this research
  through resources provided by the Electron Microscopy Facility (EMF) and the Lab
  Support Facility (LSF). This work was financially supported by the Institute of
  Science and Technology Austria and the Werner Siemens Foundation.
article_number: e66278
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Christine
  full_name: Fiedler, Christine
  id: bd3fceba-dc74-11ea-a0a7-c17f71817366
  last_name: Fiedler
- first_name: Yu
  full_name: Liu, Yu
  id: 2A70014E-F248-11E8-B48F-1D18A9856A87
  last_name: Liu
  orcid: 0000-0001-7313-6740
- first_name: Maria
  full_name: Ibáñez, Maria
  id: 43C61214-F248-11E8-B48F-1D18A9856A87
  last_name: Ibáñez
  orcid: 0000-0001-5013-2843
citation:
  ama: Fiedler C, Liu Y, Ibáñez M. Solution-processed, surface-engineered, polycrystalline
    CdSe-SnSe exhibiting low thermal conductivity. <i>Journal of Visualized Experiments</i>.
    2024;2024(207). doi:<a href="https://doi.org/10.3791/66278">10.3791/66278</a>
  apa: Fiedler, C., Liu, Y., &#38; Ibáñez, M. (2024). Solution-processed, surface-engineered,
    polycrystalline CdSe-SnSe exhibiting low thermal conductivity. <i>Journal of Visualized
    Experiments</i>. MyJove Corporation. <a href="https://doi.org/10.3791/66278">https://doi.org/10.3791/66278</a>
  chicago: Fiedler, Christine, Yu Liu, and Maria Ibáñez. “Solution-Processed, Surface-Engineered,
    Polycrystalline CdSe-SnSe Exhibiting Low Thermal Conductivity.” <i>Journal of
    Visualized Experiments</i>. MyJove Corporation, 2024. <a href="https://doi.org/10.3791/66278">https://doi.org/10.3791/66278</a>.
  ieee: C. Fiedler, Y. Liu, and M. Ibáñez, “Solution-processed, surface-engineered,
    polycrystalline CdSe-SnSe exhibiting low thermal conductivity,” <i>Journal of
    Visualized Experiments</i>, vol. 2024, no. 207. MyJove Corporation, 2024.
  ista: Fiedler C, Liu Y, Ibáñez M. 2024. Solution-processed, surface-engineered,
    polycrystalline CdSe-SnSe exhibiting low thermal conductivity. Journal of Visualized
    Experiments. 2024(207), e66278.
  mla: Fiedler, Christine, et al. “Solution-Processed, Surface-Engineered, Polycrystalline
    CdSe-SnSe Exhibiting Low Thermal Conductivity.” <i>Journal of Visualized Experiments</i>,
    vol. 2024, no. 207, e66278, MyJove Corporation, 2024, doi:<a href="https://doi.org/10.3791/66278">10.3791/66278</a>.
  short: C. Fiedler, Y. Liu, M. Ibáñez, Journal of Visualized Experiments 2024 (2024).
corr_author: '1'
date_created: 2024-06-09T22:01:02Z
date_published: 2024-05-01T00:00:00Z
date_updated: 2026-08-11T12:39:14Z
day: '01'
ddc:
- '530'
department:
- _id: MaIb
doi: 10.3791/66278
external_id:
  isi:
  - '001281657200005'
  pmid:
  - '38829127'
file:
- access_level: open_access
  checksum: ddb41f1ce2333484ab5cd109ac2941c0
  content_type: application/pdf
  creator: dernst
  date_created: 2025-02-17T15:08:55Z
  date_updated: 2025-02-17T15:08:55Z
  file_id: '19047'
  file_name: 2024_JoVE_Fiedler.pdf
  file_size: 1371995
  relation: main_file
  success: 1
file_date_updated: 2025-02-17T15:08:55Z
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intvolume: '      2024'
isi: 1
issue: '207'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc-nd/3.0/
month: '05'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 9B8F7476-BA93-11EA-9121-9846C619BF3A
  name: 'HighTE: The Werner Siemens Laboratory for the High Throughput Discovery of
    Semiconductors for Waste Heat Recovery'
publication: Journal of Visualized Experiments
publication_identifier:
  issn:
  - 1940-087X
publication_status: published
publisher: MyJove Corporation
quality_controlled: '1'
related_material:
  record:
  - id: '22626'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Solution-processed, surface-engineered, polycrystalline CdSe-SnSe exhibiting
  low thermal conductivity
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/3.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported (CC BY-NC-ND
    3.0)
  short: CC BY-NC-ND (3.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 2024
year: '2024'
...
---
_id: '15298'
abstract:
- lang: eng
  text: Mountains are important suppliers of freshwater to downstream areas, affecting
    large populations in particular in High Mountain Asia (HMA). Yet, the propagation
    of water from HMA headwaters to downstream areas is not fully understood, as interactions
    in the mountain water cycle between the cryo-, hydro- and biosphere remain elusive.
    We review the definition of blue and green water fluxes as liquid water that contributes
    to runoff at the outlet of the selected domain (blue) and water lost to the atmosphere
    through vapor fluxes, that is evaporation from water, ground, and interception
    plus transpiration (green) and propose to add the term white water to account
    for the (often neglected) evaporation and sublimation from snow and ice. We provide
    an assessment of models that can simulate the cryo-hydro-biosphere continuum and
    the interactions between spheres in high mountain catchments, going beyond disciplinary
    separations. Land surface models are uniquely able to account for such complexity,
    since they solve the coupled fluxes of water, energy, and carbon between the land
    surface and atmosphere. Due to the mechanistic nature of such models, specific
    variables can be compared systematically to independent remote sensing observations
    – providing vital insights into model accuracy and enabling the understanding
    of the complex watersheds of HMA. We discuss recent developments in spaceborne
    earth observation products that have the potential to support catchment modeling
    in high mountain regions. We then present a pilot study application of the mechanistic
    land surface model Tethys & Chloris to a glacierized watershed in the Nepalese
    Himalayas and discuss the use of high-resolution earth observation data to constrain
    the meteorological forcing uncertainty and validate model results. We use these
    insights to highlight the remaining challenges and future opportunities that remote
    sensing data presents for land surface modeling in HMA.
acknowledgement: 'This work was supported by the ESA and NRSCC Dragon 5 cooperation
  project “Cryosphere-hydrosphere interactions of the Asian water towers: using remote
  sensing to drive hyper-resolution ecohydrological modelling” [Grant no. 59199].
  PB and FP acknowledge funding from the SNSF (High-elevation precipitation in High
  Mountain Asia, HOPE)) [Grant no. 183633]. ESM, MK, SFu and FP acknowledge funding
  from the ERC under the European Union’s Horizon 2020 research and innovation program
  (Rapid mass losses of debris-covered glaciers in High Mountain Asia, RAVEN) [Grant
  no. 772751]. LJ, CZ and MMe acknowledge the Second Tibetan Plateau Scientific Expedition
  and Research Program (STEP) [grant no. 2019QZKK010308, no. 2019QZKK0206], the National
  Natural Science Foundation of China projects (Grant no. 42171039, no. 91737205),
  the Chinese Academy of Sciences President’s International Fellowship Initiative
  [Grant no. 2020VTA0001], and the MOST High-Level Foreign Expert Program [Grant no.
  G2022055010L].'
article_processing_charge: Yes
article_type: original
author:
- first_name: Pascal
  full_name: Buri, Pascal
  last_name: Buri
- first_name: Simone
  full_name: Fatichi, Simone
  id: cf8e546b-a9b0-11f0-a43b-aa89ed1b56d6
  last_name: Fatichi
- first_name: Thomas
  full_name: Shaw, Thomas
  id: 3caa3f91-1f03-11ee-96ce-e0e553054d6e
  last_name: Shaw
  orcid: 0000-0001-7640-6152
- first_name: Catriona Louise
  full_name: Fyffe, Catriona Louise
  id: 001b0422-8d15-11ed-bc51-cab6c037a228
  last_name: Fyffe
- first_name: Evan S.
  full_name: Miles, Evan S.
  last_name: Miles
- first_name: Michael
  full_name: Mccarthy, Michael
  id: 22a2674a-61ce-11ee-94b5-d18813baf16f
  last_name: Mccarthy
- first_name: Marin
  full_name: Kneib, Marin
  last_name: Kneib
- first_name: Shaoting
  full_name: Ren, Shaoting
  last_name: Ren
- first_name: Achille
  full_name: Jouberton, Achille
  last_name: Jouberton
- first_name: Stefan
  full_name: Fugger, Stefan
  last_name: Fugger
- first_name: Li
  full_name: Jia, Li
  last_name: Jia
- first_name: Jing
  full_name: Zhang, Jing
  last_name: Zhang
- first_name: Cong
  full_name: Shen, Cong
  last_name: Shen
- first_name: Chaolei
  full_name: Zheng, Chaolei
  last_name: Zheng
- first_name: Massimo
  full_name: Menenti, Massimo
  last_name: Menenti
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
  orcid: 0000-0002-5554-8087
citation:
  ama: 'Buri P, Fatichi S, Shaw T, et al. Land surface modeling informed by earth
    observation data: Toward understanding blue–green–white water fluxes in High Mountain
    Asia. <i>Geo-Spatial Information Science</i>. 2024;27(3):703-727. doi:<a href="https://doi.org/10.1080/10095020.2024.2330546">10.1080/10095020.2024.2330546</a>'
  apa: 'Buri, P., Fatichi, S., Shaw, T., Fyffe, C. L., Miles, E. S., McCarthy, M.,
    … Pellicciotti, F. (2024). Land surface modeling informed by earth observation
    data: Toward understanding blue–green–white water fluxes in High Mountain Asia.
    <i>Geo-Spatial Information Science</i>. Taylor &#38; Francis. <a href="https://doi.org/10.1080/10095020.2024.2330546">https://doi.org/10.1080/10095020.2024.2330546</a>'
  chicago: 'Buri, Pascal, Simone Fatichi, Thomas Shaw, Catriona Louise Fyffe, Evan
    S. Miles, Michael McCarthy, Marin Kneib, et al. “Land Surface Modeling Informed
    by Earth Observation Data: Toward Understanding Blue–Green–White Water Fluxes
    in High Mountain Asia.” <i>Geo-Spatial Information Science</i>. Taylor &#38; Francis,
    2024. <a href="https://doi.org/10.1080/10095020.2024.2330546">https://doi.org/10.1080/10095020.2024.2330546</a>.'
  ieee: 'P. Buri <i>et al.</i>, “Land surface modeling informed by earth observation
    data: Toward understanding blue–green–white water fluxes in High Mountain Asia,”
    <i>Geo-Spatial Information Science</i>, vol. 27, no. 3. Taylor &#38; Francis,
    pp. 703–727, 2024.'
  ista: 'Buri P, Fatichi S, Shaw T, Fyffe CL, Miles ES, McCarthy M, Kneib M, Ren S,
    Jouberton A, Fugger S, Jia L, Zhang J, Shen C, Zheng C, Menenti M, Pellicciotti
    F. 2024. Land surface modeling informed by earth observation data: Toward understanding
    blue–green–white water fluxes in High Mountain Asia. Geo-Spatial Information Science.
    27(3), 703–727.'
  mla: 'Buri, Pascal, et al. “Land Surface Modeling Informed by Earth Observation
    Data: Toward Understanding Blue–Green–White Water Fluxes in High Mountain Asia.”
    <i>Geo-Spatial Information Science</i>, vol. 27, no. 3, Taylor &#38; Francis,
    2024, pp. 703–27, doi:<a href="https://doi.org/10.1080/10095020.2024.2330546">10.1080/10095020.2024.2330546</a>.'
  short: P. Buri, S. Fatichi, T. Shaw, C.L. Fyffe, E.S. Miles, M. McCarthy, M. Kneib,
    S. Ren, A. Jouberton, S. Fugger, L. Jia, J. Zhang, C. Shen, C. Zheng, M. Menenti,
    F. Pellicciotti, Geo-Spatial Information Science 27 (2024) 703–727.
date_created: 2024-04-07T22:00:56Z
date_published: 2024-03-22T00:00:00Z
date_updated: 2026-08-12T05:38:30Z
day: '22'
ddc:
- '550'
department:
- _id: FrPe
doi: 10.1080/10095020.2024.2330546
external_id:
  isi:
  - '001189470100001'
file:
- access_level: open_access
  checksum: afbfc4e9f1bf2a00711efc30ad667c40
  content_type: application/pdf
  creator: dernst
  date_created: 2024-07-29T11:34:54Z
  date_updated: 2024-07-29T11:34:54Z
  file_id: '17342'
  file_name: 2024_GeoSpatialInfo_Buri.pdf
  file_size: 15678450
  relation: main_file
  success: 1
file_date_updated: 2024-07-29T11:34:54Z
has_accepted_license: '1'
intvolume: '        27'
isi: 1
issue: '3'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
page: 703-727
publication: Geo-Spatial Information Science
publication_identifier:
  issn:
  - 1009-5020
publication_status: published
publisher: Taylor & Francis
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Land surface modeling informed by earth observation data: Toward understanding
  blue–green–white water fluxes in High Mountain Asia'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 27
year: '2024'
...
---
OA_type: free access
_id: '17231'
abstract:
- lang: eng
  text: In the class of projective billiards, which contains the usual billiards,
    we exhibit counter-examples to Ivrii's conjecture, which states that in any planar
    billiard with smooth boundary the set of periodic orbits has zero measure. The
    counter-examples are polygons admitting a 2-parameters family of n-periodic orbits,
    with n being either 3 or any even integer greater than 4.
article_processing_charge: No
article_type: original
author:
- first_name: Corentin
  full_name: Fiorebe, Corentin
  id: 06619f18-9070-11eb-847d-d1ee780bd88b
  last_name: Fiorebe
citation:
  ama: Fiorebe C. Examples of projective billiards with open sets of periodic orbits.
    <i>Discrete and Continuous Dynamical Systems- Series A</i>. 2024;44(11):3287-3301.
    doi:<a href="https://doi.org/10.3934/dcds.2024059">10.3934/dcds.2024059</a>
  apa: Fiorebe, C. (2024). Examples of projective billiards with open sets of periodic
    orbits. <i>Discrete and Continuous Dynamical Systems- Series A</i>. AIMS. <a href="https://doi.org/10.3934/dcds.2024059">https://doi.org/10.3934/dcds.2024059</a>
  chicago: Fiorebe, Corentin. “Examples of Projective Billiards with Open Sets of
    Periodic Orbits.” <i>Discrete and Continuous Dynamical Systems- Series A</i>.
    AIMS, 2024. <a href="https://doi.org/10.3934/dcds.2024059">https://doi.org/10.3934/dcds.2024059</a>.
  ieee: C. Fiorebe, “Examples of projective billiards with open sets of periodic orbits,”
    <i>Discrete and Continuous Dynamical Systems- Series A</i>, vol. 44, no. 11. AIMS,
    pp. 3287–3301, 2024.
  ista: Fiorebe C. 2024. Examples of projective billiards with open sets of periodic
    orbits. Discrete and Continuous Dynamical Systems- Series A. 44(11), 3287–3301.
  mla: Fiorebe, Corentin. “Examples of Projective Billiards with Open Sets of Periodic
    Orbits.” <i>Discrete and Continuous Dynamical Systems- Series A</i>, vol. 44,
    no. 11, AIMS, 2024, pp. 3287–301, doi:<a href="https://doi.org/10.3934/dcds.2024059">10.3934/dcds.2024059</a>.
  short: C. Fiorebe, Discrete and Continuous Dynamical Systems- Series A 44 (2024)
    3287–3301.
corr_author: '1'
date_created: 2024-07-14T22:01:10Z
date_published: 2024-11-01T00:00:00Z
date_updated: 2026-08-12T06:19:26Z
day: '01'
ddc:
- '500'
department:
- _id: VaKa
doi: 10.3934/dcds.2024059
external_id:
  isi:
  - '001230091000001'
intvolume: '        44'
isi: 1
issue: '11'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.3934/dcds.2024059
month: '11'
oa: 1
oa_version: Published Version
page: 3287-3301
publication: Discrete and Continuous Dynamical Systems- Series A
publication_identifier:
  eissn:
  - 1553-5231
  issn:
  - 1078-0947
publication_status: published
publisher: AIMS
quality_controlled: '1'
scopus_import: '1'
status: public
title: Examples of projective billiards with open sets of periodic orbits
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 44
year: '2024'
...
---
OA_place: repository
_id: '15091'
abstract:
- lang: eng
  text: "Motivated by applications in the medical sciences, we study finite chromatic\r\nsets
    in Euclidean space from a topological perspective. Based on the persistent\r\nhomology
    for images, kernels and cokernels, we design provably stable\r\nhomological quantifiers
    that describe the geometric micro- and macro-structure\r\nof how the color classes
    mingle. These can be efficiently computed using\r\nchromatic variants of Delaunay
    and alpha complexes, and code that does these\r\ncomputations is provided."
article_number: '2212.03128'
article_processing_charge: No
arxiv: 1
author:
- first_name: Sebastiano
  full_name: Cultrera di Montesano, Sebastiano
  id: 34D2A09C-F248-11E8-B48F-1D18A9856A87
  last_name: Cultrera di Montesano
  orcid: 0000-0001-6249-0832
- first_name: Ondrej
  full_name: Draganov, Ondrej
  id: 2B23F01E-F248-11E8-B48F-1D18A9856A87
  last_name: Draganov
  orcid: 0000-0003-0464-3823
- first_name: Herbert
  full_name: Edelsbrunner, Herbert
  id: 3FB178DA-F248-11E8-B48F-1D18A9856A87
  last_name: Edelsbrunner
  orcid: 0000-0002-9823-6833
- first_name: Morteza
  full_name: Saghafian, Morteza
  id: f86f7148-b140-11ec-9577-95435b8df824
  last_name: Saghafian
citation:
  ama: Cultrera di Montesano S, Draganov O, Edelsbrunner H, Saghafian M. Chromatic
    alpha complexes. <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/arXiv.2212.03128">10.48550/arXiv.2212.03128</a>
  apa: Cultrera di Montesano, S., Draganov, O., Edelsbrunner, H., &#38; Saghafian,
    M. (n.d.). Chromatic alpha complexes. <i>arXiv</i>. <a href="https://doi.org/10.48550/arXiv.2212.03128">https://doi.org/10.48550/arXiv.2212.03128</a>
  chicago: Cultrera di Montesano, Sebastiano, Ondrej Draganov, Herbert Edelsbrunner,
    and Morteza Saghafian. “Chromatic Alpha Complexes.” <i>ArXiv</i>, n.d. <a href="https://doi.org/10.48550/arXiv.2212.03128">https://doi.org/10.48550/arXiv.2212.03128</a>.
  ieee: S. Cultrera di Montesano, O. Draganov, H. Edelsbrunner, and M. Saghafian,
    “Chromatic alpha complexes,” <i>arXiv</i>. .
  ista: Cultrera di Montesano S, Draganov O, Edelsbrunner H, Saghafian M. Chromatic
    alpha complexes. arXiv, 2212.03128.
  mla: Cultrera di Montesano, Sebastiano, et al. “Chromatic Alpha Complexes.” <i>ArXiv</i>,
    2212.03128, doi:<a href="https://doi.org/10.48550/arXiv.2212.03128">10.48550/arXiv.2212.03128</a>.
  short: S. Cultrera di Montesano, O. Draganov, H. Edelsbrunner, M. Saghafian, ArXiv
    (n.d.).
corr_author: '1'
date_created: 2024-03-08T10:13:59Z
date_published: 2024-02-07T00:00:00Z
date_updated: 2026-08-12T06:19:48Z
day: '07'
department:
- _id: HeEd
doi: 10.48550/arXiv.2212.03128
external_id:
  arxiv:
  - '2212.03128'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/2212.03128
month: '02'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: draft
related_material:
  record:
  - id: '18979'
    relation: dissertation_contains
    status: public
  - id: '15094'
    relation: dissertation_contains
    status: public
  - id: '20585'
    relation: later_version
    status: public
status: public
title: Chromatic alpha complexes
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: preprint
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2024'
...
---
_id: '17898'
abstract:
- lang: eng
  text: 'There is an ever-growing zoo of modern neural network models that can efficiently
    learn end-to-end control from visual observations. These advanced deep models,
    ranging from convolutional to Vision Transformers, from small to gigantic networks,
    have been extensively tested on offline image classification tasks. In this paper,
    we study these vision models with respect to the open-loop training to closed-loop
    generalization abilities, i.e., deployment realizes a causal feedback loop that
    is not present during training. This causality gap typically emerges in robotics
    applications such as autonomous driving, where a network is trained to imitate
    the control commands of a human. In this setting, two situations arise: 1) Closed-loop
    testing in-distribution, where the test environment shares properties with those
    of offline training data. 2) Closed-loop testing under distribution shifts and
    out-of-distribution. Contrary to recently reported results, we show that under
    proper training guidelines, all vision architectures perform indistinguishably
    well on in-distribution deployment, resolving the causality gap. In situation
    2, We observe that scale is the strongest factor in improving closed-loop generalization
    regardless of the choice of the model architecture. Our results predict the trend
    that in the future we will see larger and larger models being used in offline-training-online-deployment
    imitation learning tasks in robotic applications.'
acknowledgement: This work was partially supported in parts by the ERC-2020-AdG 101020093.
  Additionally, it was partially sponsored by the United States Air Force Research
  Laboratory and the United States Air Force Artificial Intelligence Accelerator and
  was accomplished under Cooperative Agreement Number FA8750-19-2-1000. The views
  and conclusions contained in this document are those of the authors and should not
  be interpreted as representing the official policies, either expressed or implied,
  of the United States Air Force or the U.S. Government. The U.S. Government is authorized
  to reproduce and distribute reprints for Government purposes notwithstanding any
  copyright notation herein. This work was further supported by The Boeing Company
  and the Office of Naval Research (ONR) Grant N00014-18-1-2830.
article_processing_charge: No
author:
- first_name: Mathias
  full_name: Lechner, Mathias
  id: 3DC22916-F248-11E8-B48F-1D18A9856A87
  last_name: Lechner
- first_name: Ramin
  full_name: Hasani, Ramin
  last_name: Hasani
- first_name: Alexander
  full_name: Amini, Alexander
  last_name: Amini
- first_name: Tsun Hsuan
  full_name: Wang, Tsun Hsuan
  last_name: Wang
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000-0002-2985-7724
- first_name: Daniela
  full_name: Rus, Daniela
  last_name: Rus
citation:
  ama: 'Lechner M, Hasani R, Amini A, Wang TH, Henzinger TA, Rus D. Overparametrization
    helps offline-to-online generalization of closed-loop control from pixels. In:
    <i>Proceedings of the 2024 IEEE International Conference on Robotics and Automation</i>.
    IEEE; 2024:2774-2782. doi:<a href="https://doi.org/10.1109/ICRA57147.2024.10610284">10.1109/ICRA57147.2024.10610284</a>'
  apa: 'Lechner, M., Hasani, R., Amini, A., Wang, T. H., Henzinger, T. A., &#38; Rus,
    D. (2024). Overparametrization helps offline-to-online generalization of closed-loop
    control from pixels. In <i>Proceedings of the 2024 IEEE International Conference
    on Robotics and Automation</i> (pp. 2774–2782). Yokohama, Japan: IEEE. <a href="https://doi.org/10.1109/ICRA57147.2024.10610284">https://doi.org/10.1109/ICRA57147.2024.10610284</a>'
  chicago: Lechner, Mathias, Ramin Hasani, Alexander Amini, Tsun Hsuan Wang, Thomas
    A Henzinger, and Daniela Rus. “Overparametrization Helps Offline-to-Online Generalization
    of Closed-Loop Control from Pixels.” In <i>Proceedings of the 2024 IEEE International
    Conference on Robotics and Automation</i>, 2774–82. IEEE, 2024. <a href="https://doi.org/10.1109/ICRA57147.2024.10610284">https://doi.org/10.1109/ICRA57147.2024.10610284</a>.
  ieee: M. Lechner, R. Hasani, A. Amini, T. H. Wang, T. A. Henzinger, and D. Rus,
    “Overparametrization helps offline-to-online generalization of closed-loop control
    from pixels,” in <i>Proceedings of the 2024 IEEE International Conference on Robotics
    and Automation</i>, Yokohama, Japan, 2024, pp. 2774–2782.
  ista: 'Lechner M, Hasani R, Amini A, Wang TH, Henzinger TA, Rus D. 2024. Overparametrization
    helps offline-to-online generalization of closed-loop control from pixels. Proceedings
    of the 2024 IEEE International Conference on Robotics and Automation. ICRA: International
    Conference on Robotics and Automation, 2774–2782.'
  mla: Lechner, Mathias, et al. “Overparametrization Helps Offline-to-Online Generalization
    of Closed-Loop Control from Pixels.” <i>Proceedings of the 2024 IEEE International
    Conference on Robotics and Automation</i>, IEEE, 2024, pp. 2774–82, doi:<a href="https://doi.org/10.1109/ICRA57147.2024.10610284">10.1109/ICRA57147.2024.10610284</a>.
  short: M. Lechner, R. Hasani, A. Amini, T.H. Wang, T.A. Henzinger, D. Rus, in:,
    Proceedings of the 2024 IEEE International Conference on Robotics and Automation,
    IEEE, 2024, pp. 2774–2782.
conference:
  end_date: 2024-05-17
  location: Yokohama, Japan
  name: 'ICRA: International Conference on Robotics and Automation'
  start_date: 2024-05-13
date_created: 2024-09-08T22:01:13Z
date_published: 2024-08-08T00:00:00Z
date_updated: 2026-08-12T06:35:50Z
day: '08'
department:
- _id: ToHe
doi: 10.1109/ICRA57147.2024.10610284
ec_funded: 1
external_id:
  isi:
  - '001294576202044'
isi: 1
language:
- iso: eng
month: '08'
oa_version: None
page: 2774-2782
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
  call_identifier: H2020
  grant_number: '101020093'
  name: Vigilant Algorithmic Monitoring of Software
publication: Proceedings of the 2024 IEEE International Conference on Robotics and
  Automation
publication_identifier:
  isbn:
  - '9798350384574'
  issn:
  - 1050-4729
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Overparametrization helps offline-to-online generalization of closed-loop control
  from pixels
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2024'
...
---
_id: '17893'
abstract:
- lang: eng
  text: Strong data processing inequalities (SDPI) are an important object of study
    in Information Theory and have been well studied for f -divergences. Universal
    upper and lower bounds have been provided along with several applications, connecting
    them to impossibility (converse) results, concentration of measure, hypercontractivity,
    and so on. In this paper, we study Renyi divergence and the corresponding SDPI
    constant whose behavior seems to deviate from that of ordinary <1>-divergences.
    In particular, one can find examples showing that the universal upper bound relating
    its SDPI constant to the one of Total Variation does not hold in general. In this
    work, we prove, however, that the universal lower bound involving the SDPI constant
    of the Chi-square divergence does indeed hold. Furthermore, we also provide a
    characterization of the distribution that achieves the supremum when is equal
    to 2 and consequently compute the SDPI constant for Renyi divergence of the general
    binary channel.
acknowledgement: "The work in this paper was supported in part by the Swiss National
  Science Foundation under Grant 200364.\r\n"
article_processing_charge: No
arxiv: 1
author:
- first_name: Lifu
  full_name: Jin, Lifu
  last_name: Jin
- first_name: Amedeo Roberto
  full_name: Esposito, Amedeo Roberto
  id: 9583e921-e1ad-11ec-9862-cef099626dc9
  last_name: Esposito
- first_name: Michael
  full_name: Gastpar, Michael
  last_name: Gastpar
citation:
  ama: 'Jin L, Esposito AR, Gastpar M. Properties of the strong data processing constant
    for Rényi divergence. In: <i>Proceedings of the 2024 IEEE International Symposium
    on Information Theory</i>. IEEE; 2024:3178-3183. doi:<a href="https://doi.org/10.1109/ISIT57864.2024.10619367">10.1109/ISIT57864.2024.10619367</a>'
  apa: 'Jin, L., Esposito, A. R., &#38; Gastpar, M. (2024). Properties of the strong
    data processing constant for Rényi divergence. In <i>Proceedings of the 2024 IEEE
    International Symposium on Information Theory</i> (pp. 3178–3183). Athens, Greece:
    IEEE. <a href="https://doi.org/10.1109/ISIT57864.2024.10619367">https://doi.org/10.1109/ISIT57864.2024.10619367</a>'
  chicago: Jin, Lifu, Amedeo Roberto Esposito, and Michael Gastpar. “Properties of
    the Strong Data Processing Constant for Rényi Divergence.” In <i>Proceedings of
    the 2024 IEEE International Symposium on Information Theory</i>, 3178–83. IEEE,
    2024. <a href="https://doi.org/10.1109/ISIT57864.2024.10619367">https://doi.org/10.1109/ISIT57864.2024.10619367</a>.
  ieee: L. Jin, A. R. Esposito, and M. Gastpar, “Properties of the strong data processing
    constant for Rényi divergence,” in <i>Proceedings of the 2024 IEEE International
    Symposium on Information Theory</i>, Athens, Greece, 2024, pp. 3178–3183.
  ista: 'Jin L, Esposito AR, Gastpar M. 2024. Properties of the strong data processing
    constant for Rényi divergence. Proceedings of the 2024 IEEE International Symposium
    on Information Theory. ISIT: International Symposium on Information Theory, 3178–3183.'
  mla: Jin, Lifu, et al. “Properties of the Strong Data Processing Constant for Rényi
    Divergence.” <i>Proceedings of the 2024 IEEE International Symposium on Information
    Theory</i>, IEEE, 2024, pp. 3178–83, doi:<a href="https://doi.org/10.1109/ISIT57864.2024.10619367">10.1109/ISIT57864.2024.10619367</a>.
  short: L. Jin, A.R. Esposito, M. Gastpar, in:, Proceedings of the 2024 IEEE International
    Symposium on Information Theory, IEEE, 2024, pp. 3178–3183.
conference:
  end_date: 2024-07-12
  location: Athens, Greece
  name: 'ISIT: International Symposium on Information Theory'
  start_date: 2024-07-07
corr_author: '1'
date_created: 2024-09-08T22:01:12Z
date_published: 2024-08-19T00:00:00Z
date_updated: 2026-08-12T06:38:02Z
day: '19'
department:
- _id: MaMo
doi: 10.1109/ISIT57864.2024.10619367
external_id:
  arxiv:
  - '2403.10656'
  isi:
  - '001304426903055'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: 'https://doi.org/10.48550/arXiv.2403.10656 '
month: '08'
oa: 1
oa_version: Preprint
page: 3178-3183
publication: Proceedings of the 2024 IEEE International Symposium on Information Theory
publication_identifier:
  isbn:
  - '9798350382846'
  issn:
  - 2157-8095
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Properties of the strong data processing constant for Rényi divergence
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2024'
...
---
_id: '17895'
abstract:
- lang: eng
  text: We propose a concatenated code construction for a class of discrete-alphabet
    oblivious arbitrarily varying channels (AVCs) with cost constraints. The code
    has time and space complexity polynomial in the blocklength n . It uses a Reed-Solomon
    outer code, logarithmic blocklength random inner codes, and stochastic encoding
    by permuting the codeword before transmission. When the channel satisfies a condition
    called strong DS-nonsymmetrizability (a modified version of nonsymmetrizability
    originally due to Dobrushin and Stambler), we show that the code achieves a rate
    that for a variety of oblivious AVCs (such as classically studied error/erasure
    channels) match the known capacities.
acknowledgement: "The work of M. Langberg and A. D. Sarwate was supported in part
  by the US NSF under awards CCF-1909451 and CCF1909468. B. K. Dey was supported in
  part by the Bharti Centre\r\nfor Communication in IIT Bombay. "
article_processing_charge: No
author:
- first_name: B. K.
  full_name: Dey, B. K.
  last_name: Dey
- first_name: S.
  full_name: Jaggi, S.
  last_name: Jaggi
- first_name: M.
  full_name: Langberg, M.
  last_name: Langberg
- first_name: A. D.
  full_name: Sarwate, A. D.
  last_name: Sarwate
- first_name: Yihan
  full_name: Zhang, Yihan
  id: 2ce5da42-b2ea-11eb-bba5-9f264e9d002c
  last_name: Zhang
  orcid: 0000-0002-6465-6258
citation:
  ama: 'Dey BK, Jaggi S, Langberg M, Sarwate AD, Zhang Y. Computationally efficient
    codes for strongly Dobrushin-Stambler nonsymmetrizable oblivious AVCs. In: <i>Proceedings
    of the 2024 IEEE International Symposium on Information Theory </i>. IEEE; 2024:1586-1591.
    doi:<a href="https://doi.org/10.1109/ISIT57864.2024.10619362">10.1109/ISIT57864.2024.10619362</a>'
  apa: 'Dey, B. K., Jaggi, S., Langberg, M., Sarwate, A. D., &#38; Zhang, Y. (2024).
    Computationally efficient codes for strongly Dobrushin-Stambler nonsymmetrizable
    oblivious AVCs. In <i>Proceedings of the 2024 IEEE International Symposium on
    Information Theory </i> (pp. 1586–1591). Athens, Greece: IEEE. <a href="https://doi.org/10.1109/ISIT57864.2024.10619362">https://doi.org/10.1109/ISIT57864.2024.10619362</a>'
  chicago: Dey, B. K., S. Jaggi, M. Langberg, A. D. Sarwate, and Yihan Zhang. “Computationally
    Efficient Codes for Strongly Dobrushin-Stambler Nonsymmetrizable Oblivious AVCs.”
    In <i>Proceedings of the 2024 IEEE International Symposium on Information Theory
    </i>, 1586–91. IEEE, 2024. <a href="https://doi.org/10.1109/ISIT57864.2024.10619362">https://doi.org/10.1109/ISIT57864.2024.10619362</a>.
  ieee: B. K. Dey, S. Jaggi, M. Langberg, A. D. Sarwate, and Y. Zhang, “Computationally
    efficient codes for strongly Dobrushin-Stambler nonsymmetrizable oblivious AVCs,”
    in <i>Proceedings of the 2024 IEEE International Symposium on Information Theory
    </i>, Athens, Greece, 2024, pp. 1586–1591.
  ista: 'Dey BK, Jaggi S, Langberg M, Sarwate AD, Zhang Y. 2024. Computationally efficient
    codes for strongly Dobrushin-Stambler nonsymmetrizable oblivious AVCs. Proceedings
    of the 2024 IEEE International Symposium on Information Theory . ISIT: International
    Symposium on Information Theory, 1586–1591.'
  mla: Dey, B. K., et al. “Computationally Efficient Codes for Strongly Dobrushin-Stambler
    Nonsymmetrizable Oblivious AVCs.” <i>Proceedings of the 2024 IEEE International
    Symposium on Information Theory </i>, IEEE, 2024, pp. 1586–91, doi:<a href="https://doi.org/10.1109/ISIT57864.2024.10619362">10.1109/ISIT57864.2024.10619362</a>.
  short: B.K. Dey, S. Jaggi, M. Langberg, A.D. Sarwate, Y. Zhang, in:, Proceedings
    of the 2024 IEEE International Symposium on Information Theory , IEEE, 2024, pp.
    1586–1591.
conference:
  end_date: 2024-07-12
  location: Athens, Greece
  name: 'ISIT: International Symposium on Information Theory'
  start_date: 2024-07-07
date_created: 2024-09-08T22:01:12Z
date_published: 2024-08-19T00:00:00Z
date_updated: 2026-08-12T06:37:45Z
day: '19'
department:
- _id: MaMo
doi: 10.1109/ISIT57864.2024.10619362
external_id:
  isi:
  - '001304426901091'
isi: 1
language:
- iso: eng
month: '08'
oa_version: None
page: 1586-1591
publication: 'Proceedings of the 2024 IEEE International Symposium on Information
  Theory '
publication_identifier:
  isbn:
  - '9798350382846'
  issn:
  - 2157-8095
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Computationally efficient codes for strongly Dobrushin-Stambler nonsymmetrizable
  oblivious AVCs
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2024'
...
---
_id: '17894'
abstract:
- lang: eng
  text: 'Sibson''s α -mutual information has received renewed attention recently in
    several contexts: concentration of measure under dependence, statistical learning,
    hypothesis testing, and estimation theory. In this work, we introduce several
    variational representations of Sibson''s α -mutual information: 1) as a supremum
    over joint distributions of (a combination of) KL divergences; and 2) as a supremum
    over functions of opportune expected values. Leveraging them, we produce a variety
    of novel and known results, including a generalization of transportation-cost
    inequalities and Fano''s inequality.'
acknowledgement: The work in this paper was supported in part by the Swiss National
  Science Foundation under Grant 200364.
article_processing_charge: No
author:
- first_name: Amedeo Roberto
  full_name: Esposito, Amedeo Roberto
  id: 9583e921-e1ad-11ec-9862-cef099626dc9
  last_name: Esposito
- first_name: Michael
  full_name: Gastpar, Michael
  last_name: Gastpar
- first_name: Ibrahim
  full_name: Issa, Ibrahim
  last_name: Issa
citation:
  ama: 'Esposito AR, Gastpar M, Issa I. Variational characterizations of Sibson’s
    α-mutual information. In: <i>Proceedings of the 2024 IEEE International Symposium
    on Information Theory </i>. IEEE; 2024:2110-2115. doi:<a href="https://doi.org/10.1109/ISIT57864.2024.10619378">10.1109/ISIT57864.2024.10619378</a>'
  apa: 'Esposito, A. R., Gastpar, M., &#38; Issa, I. (2024). Variational characterizations
    of Sibson’s α-mutual information. In <i>Proceedings of the 2024 IEEE International
    Symposium on Information Theory </i> (pp. 2110–2115). Athens, Greece: IEEE. <a
    href="https://doi.org/10.1109/ISIT57864.2024.10619378">https://doi.org/10.1109/ISIT57864.2024.10619378</a>'
  chicago: Esposito, Amedeo Roberto, Michael Gastpar, and Ibrahim Issa. “Variational
    Characterizations of Sibson’s α-Mutual Information.” In <i>Proceedings of the
    2024 IEEE International Symposium on Information Theory </i>, 2110–15. IEEE, 2024.
    <a href="https://doi.org/10.1109/ISIT57864.2024.10619378">https://doi.org/10.1109/ISIT57864.2024.10619378</a>.
  ieee: A. R. Esposito, M. Gastpar, and I. Issa, “Variational characterizations of
    Sibson’s α-mutual information,” in <i>Proceedings of the 2024 IEEE International
    Symposium on Information Theory </i>, Athens, Greece, 2024, pp. 2110–2115.
  ista: 'Esposito AR, Gastpar M, Issa I. 2024. Variational characterizations of Sibson’s
    α-mutual information. Proceedings of the 2024 IEEE International Symposium on
    Information Theory . ISIT: International Symposium on Information Theory, 2110–2115.'
  mla: Esposito, Amedeo Roberto, et al. “Variational Characterizations of Sibson’s
    α-Mutual Information.” <i>Proceedings of the 2024 IEEE International Symposium
    on Information Theory </i>, IEEE, 2024, pp. 2110–15, doi:<a href="https://doi.org/10.1109/ISIT57864.2024.10619378">10.1109/ISIT57864.2024.10619378</a>.
  short: A.R. Esposito, M. Gastpar, I. Issa, in:, Proceedings of the 2024 IEEE International
    Symposium on Information Theory , IEEE, 2024, pp. 2110–2115.
conference:
  end_date: 2024-07-12
  location: Athens, Greece
  name: 'ISIT: International Symposium on Information Theory'
  start_date: 2024-07-07
corr_author: '1'
date_created: 2024-09-08T22:01:12Z
date_published: 2024-08-19T00:00:00Z
date_updated: 2026-08-12T06:38:18Z
day: '19'
department:
- _id: MaMo
doi: 10.1109/ISIT57864.2024.10619378
external_id:
  isi:
  - '001304426902023'
isi: 1
language:
- iso: eng
month: '08'
oa_version: None
page: 2110-2115
publication: 'Proceedings of the 2024 IEEE International Symposium on Information
  Theory '
publication_identifier:
  isbn:
  - '9798350382846'
  issn:
  - 2157-8095
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Variational characterizations of Sibson's α-mutual information
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2024'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '18630'
abstract:
- lang: eng
  text: 'Markov chains are the de facto finite-state model for stochastic dynamical
    systems, and Markov decision processes (MDPs) extend Markov chains by incorporating
    non-deterministic behaviors. Given an MDP and rewards on states, a classical optimization
    criterion is the maximal expected total reward where the MDP stops after T steps,
    which can be computed by a simple dynamic programming algorithm. We consider a
    natural generalization of the problem where the stopping times can be chosen according
    to a probability distribution, such that the expected stopping time is T, to optimize
    the expected total reward. Quite surprisingly we establish inter-reducibility
    of the expected stopping-time problem for Markov chains with the Positivity problem
    (which is related to the well-known Skolem problem), for which establishing either
    decidability or undecidability would be a major breakthrough. Given the hardness
    of the exact problem, we consider the approximate version of the problem: we show
    that it can be solved in exponential time for Markov chains and in exponential
    space for MDPs.'
acknowledgement: The authors are grateful to the anonymous reviewers of LICS 2021
  and of a previous version of this paper for insightful comments that helped improving
  the presentation. The research presented in this paper was partially supported by
  the grant ERC CoG 863818 (ForM-SMArt).
alternative_title:
- LMCS
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Laurent
  full_name: Doyen, Laurent
  last_name: Doyen
citation:
  ama: Chatterjee K, Doyen L. Stochastic processes with expected stopping time. <i>Logical
    Methods in Computer Science</i>. 2024;20(4):11:1-11:34. doi:<a href="https://doi.org/10.46298/lmcs-20(4:11)2024">10.46298/lmcs-20(4:11)2024</a>
  apa: Chatterjee, K., &#38; Doyen, L. (2024). Stochastic processes with expected
    stopping time. <i>Logical Methods in Computer Science</i>. EPI Sciences. <a href="https://doi.org/10.46298/lmcs-20(4:11)2024">https://doi.org/10.46298/lmcs-20(4:11)2024</a>
  chicago: Chatterjee, Krishnendu, and Laurent Doyen. “Stochastic Processes with Expected
    Stopping Time.” <i>Logical Methods in Computer Science</i>. EPI Sciences, 2024.
    <a href="https://doi.org/10.46298/lmcs-20(4:11)2024">https://doi.org/10.46298/lmcs-20(4:11)2024</a>.
  ieee: K. Chatterjee and L. Doyen, “Stochastic processes with expected stopping time,”
    <i>Logical Methods in Computer Science</i>, vol. 20, no. 4. EPI Sciences, p. 11:1-11:34,
    2024.
  ista: Chatterjee K, Doyen L. 2024. Stochastic processes with expected stopping time.
    Logical Methods in Computer Science. 20(4), 11:1-11:34.
  mla: Chatterjee, Krishnendu, and Laurent Doyen. “Stochastic Processes with Expected
    Stopping Time.” <i>Logical Methods in Computer Science</i>, vol. 20, no. 4, EPI
    Sciences, 2024, p. 11:1-11:34, doi:<a href="https://doi.org/10.46298/lmcs-20(4:11)2024">10.46298/lmcs-20(4:11)2024</a>.
  short: K. Chatterjee, L. Doyen, Logical Methods in Computer Science 20 (2024) 11:1-11:34.
corr_author: '1'
date_created: 2024-12-08T23:01:56Z
date_published: 2024-11-12T00:00:00Z
date_updated: 2026-08-12T06:39:26Z
day: '12'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.46298/lmcs-20(4:11)2024
ec_funded: 1
external_id:
  arxiv:
  - '2104.07278'
  isi:
  - '001367316400002'
file:
- access_level: open_access
  checksum: b3315c74ce18ce0a30ed33d8c9972992
  content_type: application/pdf
  creator: dernst
  date_created: 2024-12-09T08:38:48Z
  date_updated: 2024-12-09T08:38:48Z
  file_id: '18633'
  file_name: 2024_LMCS_Chatterjee.pdf
  file_size: 416814
  relation: main_file
  success: 1
file_date_updated: 2024-12-09T08:38:48Z
has_accepted_license: '1'
intvolume: '        20'
isi: 1
issue: '4'
language:
- iso: eng
month: '11'
oa: 1
oa_version: Published Version
page: 11:1-11:34
project:
- _id: 0599E47C-7A3F-11EA-A408-12923DDC885E
  call_identifier: H2020
  grant_number: '863818'
  name: 'Formal Methods for Stochastic Models: Algorithms and Applications'
publication: Logical Methods in Computer Science
publication_identifier:
  eissn:
  - 1860-5974
publication_status: published
publisher: EPI Sciences
quality_controlled: '1'
related_material:
  record:
  - id: '10004'
    relation: earlier_version
    status: public
scopus_import: '1'
status: public
title: Stochastic processes with expected stopping time
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 20
year: '2024'
...
---
OA_type: closed access
_id: '18450'
abstract:
- lang: eng
  text: In this work we present the engineering of a portable platform for sensing
    SERS signals in droplets microfluidics. This system comprised not only the read-out
    platform but also a design for the microfluidic devices optimized to enhanced
    the obtained SERS signals.
acknowledgement: The authors acknowledge the financial support of the project HfPT
  – Health from Portugal, with the reference n.° C644937233-00000047, co-funded by
  Component C5 – Capitalisation and Business Innovation under the Portuguese Resilience
  and Recovery Plan, through the NextGenerationEU Fund.
article_processing_charge: No
author:
- first_name: Sergio
  full_name: Quintero, Sergio
  last_name: Quintero
- first_name: Maria
  full_name: Relvas, Maria
  last_name: Relvas
- first_name: Marta
  full_name: Aranda, Marta
  last_name: Aranda
- first_name: Fernando
  full_name: Nodal, Fernando
  id: 8ad43d5a-1ffe-11ee-8b67-8176f59de781
  last_name: Nodal
  orcid: 0009-0006-4119-4376
- first_name: Lorena
  full_name: Dieguez, Lorena
  last_name: Dieguez
- first_name: Sara
  full_name: Abalde-Cela, Sara
  last_name: Abalde-Cela
citation:
  ama: 'Quintero S, Relvas M, Aranda M, Nodal F, Dieguez L, Abalde-Cela S. Portable
    Raman platform for SERS droplets microfludics. In: <i>2024 International Conference
    on Optical MEMS and Nanophotonics</i>. IEEE; 2024. doi:<a href="https://doi.org/10.1109/OMN61224.2024.10685279">10.1109/OMN61224.2024.10685279</a>'
  apa: 'Quintero, S., Relvas, M., Aranda, M., Nodal, F., Dieguez, L., &#38; Abalde-Cela,
    S. (2024). Portable Raman platform for SERS droplets microfludics. In <i>2024
    International Conference on Optical MEMS and Nanophotonics</i>. San Sebastian,
    Spain: IEEE. <a href="https://doi.org/10.1109/OMN61224.2024.10685279">https://doi.org/10.1109/OMN61224.2024.10685279</a>'
  chicago: Quintero, Sergio, Maria Relvas, Marta Aranda, Fernando Nodal, Lorena Dieguez,
    and Sara Abalde-Cela. “Portable Raman Platform for SERS Droplets Microfludics.”
    In <i>2024 International Conference on Optical MEMS and Nanophotonics</i>. IEEE,
    2024. <a href="https://doi.org/10.1109/OMN61224.2024.10685279">https://doi.org/10.1109/OMN61224.2024.10685279</a>.
  ieee: S. Quintero, M. Relvas, M. Aranda, F. Nodal, L. Dieguez, and S. Abalde-Cela,
    “Portable Raman platform for SERS droplets microfludics,” in <i>2024 International
    Conference on Optical MEMS and Nanophotonics</i>, San Sebastian, Spain, 2024.
  ista: 'Quintero S, Relvas M, Aranda M, Nodal F, Dieguez L, Abalde-Cela S. 2024.
    Portable Raman platform for SERS droplets microfludics. 2024 International Conference
    on Optical MEMS and Nanophotonics. OMN: Conference on Optical MEMS and Nanophotonics.'
  mla: Quintero, Sergio, et al. “Portable Raman Platform for SERS Droplets Microfludics.”
    <i>2024 International Conference on Optical MEMS and Nanophotonics</i>, IEEE,
    2024, doi:<a href="https://doi.org/10.1109/OMN61224.2024.10685279">10.1109/OMN61224.2024.10685279</a>.
  short: S. Quintero, M. Relvas, M. Aranda, F. Nodal, L. Dieguez, S. Abalde-Cela,
    in:, 2024 International Conference on Optical MEMS and Nanophotonics, IEEE, 2024.
conference:
  end_date: 2024-08-01
  location: San Sebastian, Spain
  name: 'OMN: Conference on Optical MEMS and Nanophotonics'
  start_date: 2024-07-28
date_created: 2024-10-20T22:02:07Z
date_published: 2024-09-27T00:00:00Z
date_updated: 2026-08-12T06:40:33Z
day: '27'
department:
- _id: GradSch
doi: 10.1109/OMN61224.2024.10685279
external_id:
  isi:
  - '001327768000060'
isi: 1
language:
- iso: eng
month: '09'
oa_version: None
publication: 2024 International Conference on Optical MEMS and Nanophotonics
publication_identifier:
  eissn:
  - 2160-5041
  isbn:
  - '9798350384925'
  issn:
  - 2160-5033
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Portable Raman platform for SERS droplets microfludics
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2024'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18923'
abstract:
- lang: eng
  text: 'Combinatorial optimization is a challenging problem applicable in a wide
    range of fields from logistics to finance. Recently, quantum computing has been
    used to attempt to solve these problems using a range of algorithms, including
    parameterized quantum circuits, adiabatic protocols, and quantum annealing. These
    solutions typically have several challenges: 1) there is little to no performance
    gain over classical methods; 2) not all constraints and objectives may be efficiently
    encoded in the quantum ansatz; and 3) the solution domain of the objective function
    may not be the same as the bit strings of measurement outcomes. This work presents
    “nonnative hybrid algorithms”: a framework to overcome these challenges by integrating
    quantum and classical resources with a hybrid approach. By designing nonnative
    quantum variational anosatzes that inherit some but not all problem structure,
    measurement outcomes from the quantum computer can act as a resource to be used
    by classical routines to indirectly compute optimal solutions, partially overcoming
    the challenges of contemporary quantum optimization approaches. These methods
    are demonstrated using a publicly available neutral-atom quantum computer on two
    simple problems of Max k-Cut and maximum independent set. We find improvements
    in solution quality when comparing the hybrid algorithm to its “no quantum” version,
    a demonstration of a “comparative advantage.”'
acknowledgement: "The authors would like to thank Alexander Keesling, Maddie Cain,
  Nate Gemelke, and Phillip Weinberg for helpful discussions and Danylo Lykov who
  had early contributions to this work.\r\n10.13039/100000185-Defense Advanced Research
  Projects Agency Noisy Intermediate-Scale Quantum Devices (Grant Number: W911NF2010021),
  DARPA Small Business Technology Transfer program (Grant Number: 140D0422C0035)."
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Jonathan
  full_name: Wurtz, Jonathan
  last_name: Wurtz
- first_name: Stefan
  full_name: Sack, Stefan
  id: dd622248-f6e0-11ea-865d-ce382a1c81a5
  last_name: Sack
  orcid: 0000-0001-5400-8508
- first_name: Sheng-Tao
  full_name: Wang, Sheng-Tao
  last_name: Wang
citation:
  ama: Wurtz J, Sack S, Wang S-T. Solving nonnative combinatorial optimization problems
    using hybrid quantum–classical algorithms. <i>IEEE Transactions on Quantum Engineering</i>.
    2024;5:1-14. doi:<a href="https://doi.org/10.1109/tqe.2024.3443660">10.1109/tqe.2024.3443660</a>
  apa: Wurtz, J., Sack, S., &#38; Wang, S.-T. (2024). Solving nonnative combinatorial
    optimization problems using hybrid quantum–classical algorithms. <i>IEEE Transactions
    on Quantum Engineering</i>. IEEE. <a href="https://doi.org/10.1109/tqe.2024.3443660">https://doi.org/10.1109/tqe.2024.3443660</a>
  chicago: Wurtz, Jonathan, Stefan Sack, and Sheng-Tao Wang. “Solving Nonnative Combinatorial
    Optimization Problems Using Hybrid Quantum–Classical Algorithms.” <i>IEEE Transactions
    on Quantum Engineering</i>. IEEE, 2024. <a href="https://doi.org/10.1109/tqe.2024.3443660">https://doi.org/10.1109/tqe.2024.3443660</a>.
  ieee: J. Wurtz, S. Sack, and S.-T. Wang, “Solving nonnative combinatorial optimization
    problems using hybrid quantum–classical algorithms,” <i>IEEE Transactions on Quantum
    Engineering</i>, vol. 5. IEEE, pp. 1–14, 2024.
  ista: Wurtz J, Sack S, Wang S-T. 2024. Solving nonnative combinatorial optimization
    problems using hybrid quantum–classical algorithms. IEEE Transactions on Quantum
    Engineering. 5, 1–14.
  mla: Wurtz, Jonathan, et al. “Solving Nonnative Combinatorial Optimization Problems
    Using Hybrid Quantum–Classical Algorithms.” <i>IEEE Transactions on Quantum Engineering</i>,
    vol. 5, IEEE, 2024, pp. 1–14, doi:<a href="https://doi.org/10.1109/tqe.2024.3443660">10.1109/tqe.2024.3443660</a>.
  short: J. Wurtz, S. Sack, S.-T. Wang, IEEE Transactions on Quantum Engineering 5
    (2024) 1–14.
das_tickbox: '1'
date_created: 2025-01-27T15:00:44Z
date_published: 2024-08-14T00:00:00Z
date_updated: 2026-08-12T06:42:26Z
day: '14'
ddc:
- '530'
department:
- _id: MaSe
doi: 10.1109/tqe.2024.3443660
file:
- access_level: open_access
  checksum: 19b84e35cba05bde72bfe7e0b54c3e6c
  content_type: application/pdf
  creator: dernst
  date_created: 2025-01-27T15:03:09Z
  date_updated: 2025-01-27T15:03:09Z
  file_id: '18924'
  file_name: 2024_IEEEQuantumComputing_Wurtz.pdf
  file_size: 1753095
  relation: main_file
  success: 1
file_date_updated: 2025-01-27T15:03:09Z
has_accepted_license: '1'
intvolume: '         5'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: 1-14
publication: IEEE Transactions on Quantum Engineering
publication_identifier:
  issn:
  - 2689-1808
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Solving nonnative combinatorial optimization problems using hybrid quantum–classical
  algorithms
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 5
year: '2024'
...
---
OA_place: publisher
OA_type: hybrid
_id: '22563'
abstract:
- lang: eng
  text: The ascent of water from the soil to the leaves of vascular plants, described
    by the study of plant hydraulics, regulates ecosystem responses to environmental
    forcing and recovery from stress periods. Several approaches to model plant hydraulics
    have been proposed. In this study, we introduce four different versions of plant
    hydraulics representations in the terrestrial biosphere model T&C to understand
    the significance of plant hydraulics to ecosystem functioning. We tested representations
    of plant hydraulics, investigating plant water capacitance, and long-term xylem
    damages following drought. The four models we tested were a combination of representations
    including or neglecting capacitance and including or neglecting xylem damage legacies.
    Using the models at six case studies spanning semiarid to tropical ecosystems,
    we quantify how plant xylem flow, plant water storage and long-term xylem damage
    can modulate overall water and carbon dynamics across multiple time scales. We
    show that as drought develops, models with plant hydraulics predict a slower onset
    of plant water stress, and a diurnal variability of water and carbon fluxes closer
    to observations. Plant water storage was found to be particularly important for
    the diurnal dynamics of water and carbon fluxes, with models that include plant
    water capacitance yielding better results. Models including permanent damage to
    conducting plant tissues show an additional significant drought legacy effect,
    limiting plant productivity during the recovery phase following major droughts.
    However, when considering ecosystem responses to the observed climate variability,
    plant hydraulic modules alone cannot significantly improve the overall model performance,
    even though they reproduce more realistic water and carbon dynamics. This opens
    new avenues for model development, explicitly linking plant hydraulics with additional
    ecosystem processes, such as plant phenology and improved carbon allocation algorithms.
article_number: e17022
article_processing_charge: No
article_type: original
author:
- first_name: Athanasios
  full_name: Paschalis, Athanasios
  last_name: Paschalis
- first_name: Martin G.
  full_name: De Kauwe, Martin G.
  last_name: De Kauwe
- first_name: Manon
  full_name: Sabot, Manon
  last_name: Sabot
- first_name: Simone
  full_name: Fatichi, Simone
  id: cf8e546b-a9b0-11f0-a43b-aa89ed1b56d6
  last_name: Fatichi
citation:
  ama: Paschalis A, De Kauwe MG, Sabot M, Fatichi S. When do plant hydraulics matter
    in terrestrial biosphere modelling? <i>Global Change Biology</i>. 2024;30(1).
    doi:<a href="https://doi.org/10.1111/gcb.17022">10.1111/gcb.17022</a>
  apa: Paschalis, A., De Kauwe, M. G., Sabot, M., &#38; Fatichi, S. (2024). When do
    plant hydraulics matter in terrestrial biosphere modelling? <i>Global Change Biology</i>.
    Wiley. <a href="https://doi.org/10.1111/gcb.17022">https://doi.org/10.1111/gcb.17022</a>
  chicago: Paschalis, Athanasios, Martin G. De Kauwe, Manon Sabot, and Simone Fatichi.
    “When Do Plant Hydraulics Matter in Terrestrial Biosphere Modelling?” <i>Global
    Change Biology</i>. Wiley, 2024. <a href="https://doi.org/10.1111/gcb.17022">https://doi.org/10.1111/gcb.17022</a>.
  ieee: A. Paschalis, M. G. De Kauwe, M. Sabot, and S. Fatichi, “When do plant hydraulics
    matter in terrestrial biosphere modelling?,” <i>Global Change Biology</i>, vol.
    30, no. 1. Wiley, 2024.
  ista: Paschalis A, De Kauwe MG, Sabot M, Fatichi S. 2024. When do plant hydraulics
    matter in terrestrial biosphere modelling? Global Change Biology. 30(1), e17022.
  mla: Paschalis, Athanasios, et al. “When Do Plant Hydraulics Matter in Terrestrial
    Biosphere Modelling?” <i>Global Change Biology</i>, vol. 30, no. 1, e17022, Wiley,
    2024, doi:<a href="https://doi.org/10.1111/gcb.17022">10.1111/gcb.17022</a>.
  short: A. Paschalis, M.G. De Kauwe, M. Sabot, S. Fatichi, Global Change Biology
    30 (2024).
das_tickbox: '1'
date_created: 2026-07-27T12:30:24Z
date_published: 2024-01-01T00:00:00Z
date_updated: 2026-08-12T08:44:53Z
day: '01'
doi: 10.1111/gcb.17022
extern: '1'
external_id:
  pmid:
  - '37962234 '
intvolume: '        30'
issue: '1'
keyword:
- Ecosystem recovery
- Ecosystem responses
- Plant hydraulics
- Terrestrial biosphere model
- Water stress
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: ' https://doi.org/10.1111/gcb.17022'
month: '01'
oa: 1
oa_version: Published Version
pmid: 1
publication: Global Change Biology
publication_identifier:
  eissn:
  - 1365-2486
  issn:
  - 1354-1013
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: When do plant hydraulics matter in terrestrial biosphere modelling?
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 30
year: '2024'
...
---
OA_place: publisher
OA_type: hybrid
_id: '22583'
abstract:
- lang: eng
  text: Accurately predicting weather and climate in cities is critical for safeguarding
    human health and strengthening urban resilience. Multimodel evaluations can lead
    to model improvements; however, there have been no major intercomparisons of urban-focussed
    land surface models in over a decade. Here, in Phase 1 of the Urban-PLUMBER project,
    we evaluate the ability of 30 land surface models to simulate surface energy fluxes
    critical to atmospheric meteorological and air quality simulations. We establish
    minimum and upper performance expectations for participating models using simple
    information-limited models as benchmarks. Compared with the last major model intercomparison
    at the same site, we find broad improvement in the current cohort's predictions
    of short-wave radiation, sensible and latent heat fluxes, but little or no improvement
    in long-wave radiation and momentum fluxes. Models with a simple urban representation
    (e.g., ‘slab’ schemes) generally perform well, particularly when combined with
    sophisticated hydrological/vegetation models. Some mid-complexity models (e.g.,
    ‘canyon’ schemes) also perform well, indicating efforts to integrate vegetation
    and hydrology processes have paid dividends. The most complex models that resolve
    three-dimensional interactions between buildings in general did not perform as
    well as other categories. However, these models also tended to have the simplest
    representations of hydrology and vegetation. Models without any urban representation
    (i.e., vegetation-only land surface models) performed poorly for latent heat fluxes,
    and reasonably for other energy fluxes at this suburban site. Our analysis identified
    widespread human errors in initial submissions that substantially affected model
    performances. Although significant efforts are applied to correct these errors,
    we conclude that human factors are likely to influence results in this (or any)
    model intercomparison, particularly where participating scientists have varying
    experience and first languages. These initial results are for one suburban site,
    and future phases of Urban-PLUMBER will evaluate models across 20 sites in different
    urban and regional climate zones.
article_processing_charge: No
article_type: original
author:
- first_name: Mathew J.
  full_name: Lipson, Mathew J.
  last_name: Lipson
- first_name: Sue
  full_name: Grimmond, Sue
  last_name: Grimmond
- first_name: Martin
  full_name: Best, Martin
  last_name: Best
- first_name: Gab
  full_name: Abramowitz, Gab
  last_name: Abramowitz
- first_name: Andrew
  full_name: Coutts, Andrew
  last_name: Coutts
- first_name: Nigel
  full_name: Tapper, Nigel
  last_name: Tapper
- first_name: Jong‐Jin
  full_name: Baik, Jong‐Jin
  last_name: Baik
- first_name: Meiring
  full_name: Beyers, Meiring
  last_name: Beyers
- first_name: Lewis
  full_name: Blunn, Lewis
  last_name: Blunn
- first_name: Souhail
  full_name: Boussetta, Souhail
  last_name: Boussetta
- first_name: Elie
  full_name: Bou‐Zeid, Elie
  last_name: Bou‐Zeid
- first_name: Martin G.
  full_name: De Kauwe, Martin G.
  last_name: De Kauwe
- first_name: Cécile
  full_name: de Munck, Cécile
  last_name: de Munck
- first_name: Matthias
  full_name: Demuzere, Matthias
  last_name: Demuzere
- first_name: Simone
  full_name: Fatichi, Simone
  id: cf8e546b-a9b0-11f0-a43b-aa89ed1b56d6
  last_name: Fatichi
- first_name: Krzysztof
  full_name: Fortuniak, Krzysztof
  last_name: Fortuniak
- first_name: Beom‐Soon
  full_name: Han, Beom‐Soon
  last_name: Han
- first_name: Margaret A.
  full_name: Hendry, Margaret A.
  last_name: Hendry
- first_name: Yukihiro
  full_name: Kikegawa, Yukihiro
  last_name: Kikegawa
- first_name: Hiroaki
  full_name: Kondo, Hiroaki
  last_name: Kondo
- first_name: Doo‐Il
  full_name: Lee, Doo‐Il
  last_name: Lee
- first_name: Sang‐Hyun
  full_name: Lee, Sang‐Hyun
  last_name: Lee
- first_name: Aude
  full_name: Lemonsu, Aude
  last_name: Lemonsu
- first_name: Tiago
  full_name: Machado, Tiago
  last_name: Machado
- first_name: Gabriele
  full_name: Manoli, Gabriele
  last_name: Manoli
- first_name: Alberto
  full_name: Martilli, Alberto
  last_name: Martilli
- first_name: Valéry
  full_name: Masson, Valéry
  last_name: Masson
- first_name: Joe
  full_name: McNorton, Joe
  last_name: McNorton
- first_name: Naika
  full_name: Meili, Naika
  last_name: Meili
- first_name: David
  full_name: Meyer, David
  last_name: Meyer
- first_name: Kerry A.
  full_name: Nice, Kerry A.
  last_name: Nice
- first_name: Keith W.
  full_name: Oleson, Keith W.
  last_name: Oleson
- first_name: Seung‐Bu
  full_name: Park, Seung‐Bu
  last_name: Park
- first_name: Michael
  full_name: Roth, Michael
  last_name: Roth
- first_name: Robert
  full_name: Schoetter, Robert
  last_name: Schoetter
- first_name: Andrés
  full_name: Simón‐Moral, Andrés
  last_name: Simón‐Moral
- first_name: Gert‐Jan
  full_name: Steeneveld, Gert‐Jan
  last_name: Steeneveld
- first_name: Ting
  full_name: Sun, Ting
  last_name: Sun
- first_name: Yuya
  full_name: Takane, Yuya
  last_name: Takane
- first_name: Marcus
  full_name: Thatcher, Marcus
  last_name: Thatcher
- first_name: Aristofanis
  full_name: Tsiringakis, Aristofanis
  last_name: Tsiringakis
- first_name: Mikhail
  full_name: Varentsov, Mikhail
  last_name: Varentsov
- first_name: Chenghao
  full_name: Wang, Chenghao
  last_name: Wang
- first_name: Zhi‐Hua
  full_name: Wang, Zhi‐Hua
  last_name: Wang
- first_name: Andy J.
  full_name: Pitman, Andy J.
  last_name: Pitman
citation:
  ama: 'Lipson MJ, Grimmond S, Best M, et al. Evaluation of 30 urban land surface
    models in the Urban-PLUMBER project: Phase 1 results. <i>Quarterly Journal of
    the Royal Meteorological Society</i>. 2024;150(758):126-169. doi:<a href="https://doi.org/10.1002/qj.4589">10.1002/qj.4589</a>'
  apa: 'Lipson, M. J., Grimmond, S., Best, M., Abramowitz, G., Coutts, A., Tapper,
    N., … Pitman, A. J. (2024). Evaluation of 30 urban land surface models in the
    Urban-PLUMBER project: Phase 1 results. <i>Quarterly Journal of the Royal Meteorological
    Society</i>. Wiley. <a href="https://doi.org/10.1002/qj.4589">https://doi.org/10.1002/qj.4589</a>'
  chicago: 'Lipson, Mathew J., Sue Grimmond, Martin Best, Gab Abramowitz, Andrew Coutts,
    Nigel Tapper, Jong‐Jin Baik, et al. “Evaluation of 30 Urban Land Surface Models
    in the Urban-PLUMBER Project: Phase 1 Results.” <i>Quarterly Journal of the Royal
    Meteorological Society</i>. Wiley, 2024. <a href="https://doi.org/10.1002/qj.4589">https://doi.org/10.1002/qj.4589</a>.'
  ieee: 'M. J. Lipson <i>et al.</i>, “Evaluation of 30 urban land surface models in
    the Urban-PLUMBER project: Phase 1 results,” <i>Quarterly Journal of the Royal
    Meteorological Society</i>, vol. 150, no. 758. Wiley, pp. 126–169, 2024.'
  ista: 'Lipson MJ, Grimmond S, Best M, Abramowitz G, Coutts A, Tapper N, Baik J,
    Beyers M, Blunn L, Boussetta S, Bou‐Zeid E, De Kauwe MG, de Munck C, Demuzere
    M, Fatichi S, Fortuniak K, Han B, Hendry MA, Kikegawa Y, Kondo H, Lee D, Lee S,
    Lemonsu A, Machado T, Manoli G, Martilli A, Masson V, McNorton J, Meili N, Meyer
    D, Nice KA, Oleson KW, Park S, Roth M, Schoetter R, Simón‐Moral A, Steeneveld
    G, Sun T, Takane Y, Thatcher M, Tsiringakis A, Varentsov M, Wang C, Wang Z, Pitman
    AJ. 2024. Evaluation of 30 urban land surface models in the Urban-PLUMBER project:
    Phase 1 results. Quarterly Journal of the Royal Meteorological Society. 150(758),
    126–169.'
  mla: 'Lipson, Mathew J., et al. “Evaluation of 30 Urban Land Surface Models in the
    Urban-PLUMBER Project: Phase 1 Results.” <i>Quarterly Journal of the Royal Meteorological
    Society</i>, vol. 150, no. 758, Wiley, 2024, pp. 126–69, doi:<a href="https://doi.org/10.1002/qj.4589">10.1002/qj.4589</a>.'
  short: M.J. Lipson, S. Grimmond, M. Best, G. Abramowitz, A. Coutts, N. Tapper, J.
    Baik, M. Beyers, L. Blunn, S. Boussetta, E. Bou‐Zeid, M.G. De Kauwe, C. de Munck,
    M. Demuzere, S. Fatichi, K. Fortuniak, B. Han, M.A. Hendry, Y. Kikegawa, H. Kondo,
    D. Lee, S. Lee, A. Lemonsu, T. Machado, G. Manoli, A. Martilli, V. Masson, J.
    McNorton, N. Meili, D. Meyer, K.A. Nice, K.W. Oleson, S. Park, M. Roth, R. Schoetter,
    A. Simón‐Moral, G. Steeneveld, T. Sun, Y. Takane, M. Thatcher, A. Tsiringakis,
    M. Varentsov, C. Wang, Z. Wang, A.J. Pitman, Quarterly Journal of the Royal Meteorological
    Society 150 (2024) 126–169.
das_tickbox: '1'
date_created: 2026-07-27T12:30:25Z
date_published: 2024-01-01T00:00:00Z
date_updated: 2026-08-12T08:53:18Z
day: '01'
doi: 10.1002/qj.4589
extern: '1'
intvolume: '       150'
issue: '758'
keyword:
- Benchmark
- Energy balance
- Intercomparison
- Model evaluation
- Urban climate
- Urban meteorology
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1002/qj.4589
month: '01'
oa: 1
oa_version: Published Version
page: 126-169
publication: Quarterly Journal of the Royal Meteorological Society
publication_identifier:
  eissn:
  - 1477-870X
  issn:
  - 0035-9009
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Evaluation of 30 urban land surface models in the Urban-PLUMBER project: Phase
  1 results'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 150
year: '2024'
...
