---
_id: '14990'
abstract:
- lang: eng
  text: The software artefact to evaluate the approximation of stationary distributions
    implementation.
article_processing_charge: No
author:
- first_name: Tobias
  full_name: Meggendorfer, Tobias
  id: b21b0c15-30a2-11eb-80dc-f13ca25802e1
  last_name: Meggendorfer
  orcid: 0000-0002-1712-2165
citation:
  ama: 'Meggendorfer T. Artefact for: Correct Approximation of Stationary Distributions.
    2023. doi:<a href="https://doi.org/10.5281/ZENODO.7548214">10.5281/ZENODO.7548214</a>'
  apa: 'Meggendorfer, T. (2023). Artefact for: Correct Approximation of Stationary
    Distributions. Zenodo. <a href="https://doi.org/10.5281/ZENODO.7548214">https://doi.org/10.5281/ZENODO.7548214</a>'
  chicago: 'Meggendorfer, Tobias. “Artefact for: Correct Approximation of Stationary
    Distributions.” Zenodo, 2023. <a href="https://doi.org/10.5281/ZENODO.7548214">https://doi.org/10.5281/ZENODO.7548214</a>.'
  ieee: 'T. Meggendorfer, “Artefact for: Correct Approximation of Stationary Distributions.”
    Zenodo, 2023.'
  ista: 'Meggendorfer T. 2023. Artefact for: Correct Approximation of Stationary Distributions,
    Zenodo, <a href="https://doi.org/10.5281/ZENODO.7548214">10.5281/ZENODO.7548214</a>.'
  mla: 'Meggendorfer, Tobias. <i>Artefact for: Correct Approximation of Stationary
    Distributions</i>. Zenodo, 2023, doi:<a href="https://doi.org/10.5281/ZENODO.7548214">10.5281/ZENODO.7548214</a>.'
  short: T. Meggendorfer, (2023).
corr_author: '1'
date_created: 2024-02-14T14:27:06Z
date_published: 2023-01-18T00:00:00Z
date_updated: 2025-09-09T12:28:12Z
day: '18'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.5281/ZENODO.7548214
has_accepted_license: '1'
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5281/zenodo.7548214
month: '01'
oa: 1
oa_version: Published Version
publisher: Zenodo
related_material:
  record:
  - id: '13139'
    relation: used_in_publication
    status: public
status: public
title: 'Artefact for: Correct Approximation of Stationary Distributions'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2023'
...
---
_id: '14991'
abstract:
- lang: eng
  text: This repository contains the data, scripts, WRF codes and files required to
    reproduce the results of the manuscript "Assessing Memory in Convection Schemes
    Using Idealized Tests" submitted to the Journal of Advances in Modeling Earth
    Systems (JAMES).
article_processing_charge: No
author:
- first_name: Yi-Ling
  full_name: Hwong, Yi-Ling
  id: 1217aa61-4dd1-11ec-9ac3-f2ba3f17ee22
  last_name: Hwong
  orcid: 0000-0001-9281-3479
- first_name: Maxime
  full_name: Colin, Maxime
  last_name: Colin
- first_name: Philipp
  full_name: Aglas, Philipp
  id: 02eace56-97fc-11ee-b81a-f0939ca85a77
  last_name: Aglas
- first_name: Caroline J
  full_name: Muller, Caroline J
  id: f978ccb0-3f7f-11eb-b193-b0e2bd13182b
  last_name: Muller
  orcid: 0000-0001-5836-5350
- first_name: Steven C.
  full_name: Sherwood, Steven C.
  last_name: Sherwood
citation:
  ama: Hwong Y-L, Colin M, Aglas P, Muller CJ, Sherwood SC. Data-assessing memory
    in convection schemes using idealized tests. 2023. doi:<a href="https://doi.org/10.5281/ZENODO.7757041">10.5281/ZENODO.7757041</a>
  apa: Hwong, Y.-L., Colin, M., Aglas, P., Muller, C. J., &#38; Sherwood, S. C. (2023).
    Data-assessing memory in convection schemes using idealized tests. Zenodo. <a
    href="https://doi.org/10.5281/ZENODO.7757041">https://doi.org/10.5281/ZENODO.7757041</a>
  chicago: Hwong, Yi-Ling, Maxime Colin, Philipp Aglas, Caroline J Muller, and Steven
    C. Sherwood. “Data-Assessing Memory in Convection Schemes Using Idealized Tests.”
    Zenodo, 2023. <a href="https://doi.org/10.5281/ZENODO.7757041">https://doi.org/10.5281/ZENODO.7757041</a>.
  ieee: Y.-L. Hwong, M. Colin, P. Aglas, C. J. Muller, and S. C. Sherwood, “Data-assessing
    memory in convection schemes using idealized tests.” Zenodo, 2023.
  ista: Hwong Y-L, Colin M, Aglas P, Muller CJ, Sherwood SC. 2023. Data-assessing
    memory in convection schemes using idealized tests, Zenodo, <a href="https://doi.org/10.5281/ZENODO.7757041">10.5281/ZENODO.7757041</a>.
  mla: Hwong, Yi-Ling, et al. <i>Data-Assessing Memory in Convection Schemes Using
    Idealized Tests</i>. Zenodo, 2023, doi:<a href="https://doi.org/10.5281/ZENODO.7757041">10.5281/ZENODO.7757041</a>.
  short: Y.-L. Hwong, M. Colin, P. Aglas, C.J. Muller, S.C. Sherwood, (2023).
corr_author: '1'
date_created: 2024-02-14T14:37:57Z
date_published: 2023-06-23T00:00:00Z
date_updated: 2025-09-09T13:35:40Z
day: '23'
ddc:
- '550'
department:
- _id: CaMu
doi: 10.5281/ZENODO.7757041
ec_funded: 1
has_accepted_license: '1'
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5281/zenodo.7757041
month: '06'
oa: 1
oa_version: Published Version
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publisher: Zenodo
related_material:
  record:
  - id: '14654'
    relation: used_in_publication
    status: public
status: public
title: Data-assessing memory in convection schemes using idealized tests
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2023'
...
---
_id: '14992'
abstract:
- lang: eng
  text: In this chapter we first review the Levy–Lieb functional, which gives the
    lowest kinetic and interaction energy that can be reached with all possible quantum
    states having a given density. We discuss two possible convex generalizations
    of this functional, corresponding to using mixed canonical and grand-canonical
    states, respectively. We present some recent works about the local density approximation,
    in which the functionals get replaced by purely local functionals constructed
    using the uniform electron gas energy per unit volume. We then review the known
    upper and lower bounds on the Levy–Lieb functionals. We start with the kinetic
    energy alone, then turn to the classical interaction alone, before we are able
    to put everything together. A later section is devoted to the Hohenberg–Kohn theorem
    and the role of many-body unique continuation in its proof.
alternative_title:
- Mathematics and Molecular Modeling
article_processing_charge: No
arxiv: 1
author:
- first_name: Mathieu
  full_name: Lewin, Mathieu
  last_name: Lewin
- first_name: Elliott H.
  full_name: Lieb, Elliott H.
  last_name: Lieb
- first_name: Robert
  full_name: Seiringer, Robert
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
citation:
  ama: 'Lewin M, Lieb EH, Seiringer R. Universal Functionals in Density Functional
    Theory. In: Cances E, Friesecke G, eds. <i>Density Functional Theory</i>. 1st
    ed. MAMOMO. Springer; 2023:115-182. doi:<a href="https://doi.org/10.1007/978-3-031-22340-2_3">10.1007/978-3-031-22340-2_3</a>'
  apa: Lewin, M., Lieb, E. H., &#38; Seiringer, R. (2023). Universal Functionals in
    Density Functional Theory. In E. Cances &#38; G. Friesecke (Eds.), <i>Density
    Functional Theory</i> (1st ed., pp. 115–182). Springer. <a href="https://doi.org/10.1007/978-3-031-22340-2_3">https://doi.org/10.1007/978-3-031-22340-2_3</a>
  chicago: Lewin, Mathieu, Elliott H. Lieb, and Robert Seiringer. “Universal Functionals
    in Density Functional Theory.” In <i>Density Functional Theory</i>, edited by
    Eric Cances and Gero Friesecke, 1st ed., 115–82. MAMOMO. Springer, 2023. <a href="https://doi.org/10.1007/978-3-031-22340-2_3">https://doi.org/10.1007/978-3-031-22340-2_3</a>.
  ieee: M. Lewin, E. H. Lieb, and R. Seiringer, “Universal Functionals in Density
    Functional Theory,” in <i>Density Functional Theory</i>, 1st ed., E. Cances and
    G. Friesecke, Eds. Springer, 2023, pp. 115–182.
  ista: 'Lewin M, Lieb EH, Seiringer R. 2023.Universal Functionals in Density Functional
    Theory. In: Density Functional Theory. Mathematics and Molecular Modeling, , 115–182.'
  mla: Lewin, Mathieu, et al. “Universal Functionals in Density Functional Theory.”
    <i>Density Functional Theory</i>, edited by Eric Cances and Gero Friesecke, 1st
    ed., Springer, 2023, pp. 115–82, doi:<a href="https://doi.org/10.1007/978-3-031-22340-2_3">10.1007/978-3-031-22340-2_3</a>.
  short: M. Lewin, E.H. Lieb, R. Seiringer, in:, E. Cances, G. Friesecke (Eds.), Density
    Functional Theory, 1st ed., Springer, 2023, pp. 115–182.
date_created: 2024-02-14T14:44:33Z
date_published: 2023-07-19T00:00:00Z
date_updated: 2024-02-20T08:33:06Z
day: '19'
department:
- _id: RoSe
doi: 10.1007/978-3-031-22340-2_3
edition: '1'
editor:
- first_name: Eric
  full_name: Cances, Eric
  last_name: Cances
- first_name: Gero
  full_name: Friesecke, Gero
  last_name: Friesecke
external_id:
  arxiv:
  - '1912.10424'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1912.10424
month: '07'
oa: 1
oa_version: Preprint
page: 115-182
publication: Density Functional Theory
publication_identifier:
  eisbn:
  - '9783031223402'
  isbn:
  - '9783031223396'
  issn:
  - 3005-0286
publication_status: published
publisher: Springer
quality_controlled: '1'
series_title: MAMOMO
status: public
title: Universal Functionals in Density Functional Theory
type: book_chapter
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2023'
...
---
_id: '14993'
abstract:
- lang: eng
  text: "Traditional top-down approaches for global health have historically failed
    to achieve social progress (Hoffman et al., 2015; Hoffman & Røttingen, 2015).
    Recently, however, a more holistic, multi-level approach termed One Health (OH)
    (Osterhaus et al., 2020) is being adopted. Several sets of challenges have been
    identified for the implementation of OH (dos S. Ribeiro et al., 2019), including
    policy and funding, education and training, and multi-actor, multi-domain, and
    multi-level collaborations. These exist despite the increasing accessibility to\r\nknowledge
    and digital collaborative research tools through the internet. To address some
    of these challenges, we propose a general framework for grassroots community-based
    means of participatory research. Additionally, we present a specific roadmap to
    create a Machine Learning for Global Health community in Africa. The proposed
    framework aims to enable any small group of individuals with scarce resources
    to build and sustain an online community within approximately two years. We provide
    a discussion on the potential impact of the proposed framework for global health
    research collaborations."
acknowledgement: "Houcemeddine Turki’s contributions to this final output have been
  funded through the Adapting\r\nWikidata to support clinical practice using Data
  Science, Semantic Web and Machine Learning\r\nproject, which is part of the Wikimedia
  Research Fund maintained by the Wikimedia Foundation in San Francisco, California,
  United States of America."
article_processing_charge: No
author:
- first_name: Christopher
  full_name: Currin, Christopher
  id: e8321fc5-3091-11eb-8a53-83f309a11ac9
  last_name: Currin
  orcid: 0000-0002-4809-5059
- first_name: Mercy Nyamewaa
  full_name: Asiedu , Mercy Nyamewaa
  last_name: 'Asiedu '
- first_name: Chris
  full_name: Fourie, Chris
  last_name: Fourie
- first_name: Benjamin
  full_name: Rosman, Benjamin
  last_name: Rosman
- first_name: Houcemeddine
  full_name: Turki, Houcemeddine
  last_name: Turki
- first_name: Atnafu
  full_name: Lambebo Tonja, Atnafu
  last_name: Lambebo Tonja
- first_name: Jade
  full_name: Abbott, Jade
  last_name: Abbott
- first_name: Marvellous
  full_name: Ajala, Marvellous
  last_name: Ajala
- first_name: Sadiq Adewale
  full_name: Adedayo, Sadiq Adewale
  last_name: Adedayo
- first_name: Chris Chinenye
  full_name: Emezue, Chris Chinenye
  last_name: Emezue
- first_name: Daphne
  full_name: Machangara, Daphne
  last_name: Machangara
citation:
  ama: 'Currin C, Asiedu  MN, Fourie C, et al. A framework for grassroots research
    collaboration in machine learning and global health. In: <i>1st Workshop on Machine
    Learning &#38; Global Health</i>. OpenReview; 2023.'
  apa: 'Currin, C., Asiedu , M. N., Fourie, C., Rosman, B., Turki, H., Lambebo Tonja,
    A., … Machangara, D. (2023). A framework for grassroots research collaboration
    in machine learning and global health. In <i>1st Workshop on Machine Learning
    &#38; Global Health</i>. Kigali, Rwanda: OpenReview.'
  chicago: Currin, Christopher, Mercy Nyamewaa Asiedu , Chris Fourie, Benjamin Rosman,
    Houcemeddine Turki, Atnafu Lambebo Tonja, Jade Abbott, et al. “A Framework for
    Grassroots Research Collaboration in Machine Learning and Global Health.” In <i>1st
    Workshop on Machine Learning &#38; Global Health</i>. OpenReview, 2023.
  ieee: C. Currin <i>et al.</i>, “A framework for grassroots research collaboration
    in machine learning and global health,” in <i>1st Workshop on Machine Learning
    &#38; Global Health</i>, Kigali, Rwanda, 2023.
  ista: 'Currin C, Asiedu  MN, Fourie C, Rosman B, Turki H, Lambebo Tonja A, Abbott
    J, Ajala M, Adedayo SA, Emezue CC, Machangara D. 2023. A framework for grassroots
    research collaboration in machine learning and global health. 1st Workshop on
    Machine Learning &#38; Global Health. ICLR: International Conference on Learning
    Representations.'
  mla: Currin, Christopher, et al. “A Framework for Grassroots Research Collaboration
    in Machine Learning and Global Health.” <i>1st Workshop on Machine Learning &#38;
    Global Health</i>, OpenReview, 2023.
  short: C. Currin, M.N. Asiedu , C. Fourie, B. Rosman, H. Turki, A. Lambebo Tonja,
    J. Abbott, M. Ajala, S.A. Adedayo, C.C. Emezue, D. Machangara, in:, 1st Workshop
    on Machine Learning &#38; Global Health, OpenReview, 2023.
conference:
  end_date: 2023-05-05
  location: Kigali, Rwanda
  name: 'ICLR: International Conference on Learning Representations'
  start_date: 2023-05-05
date_created: 2024-02-14T15:11:48Z
date_published: 2023-03-02T00:00:00Z
date_updated: 2026-06-18T17:42:25Z
day: '02'
ddc:
- '000'
department:
- _id: TiVo
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://openreview.net/forum?id=jHY_G91R880
month: '03'
oa: 1
oa_version: Published Version
publication: 1st Workshop on Machine Learning & Global Health
publication_status: published
publisher: OpenReview
quality_controlled: '1'
status: public
title: A framework for grassroots research collaboration in machine learning and global
  health
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2023'
...
---
_id: '14994'
abstract:
- lang: eng
  text: This resource contains the artifacts for reproducing the experimental results
    presented in the paper titled "A Flexible Toolchain for Symbolic Rabin Games under
    Fair and Stochastic Uncertainties" that has been submitted in CAV 2023.
article_processing_charge: No
author:
- first_name: Rupak
  full_name: Majumdar, Rupak
  last_name: Majumdar
- first_name: Kaushik
  full_name: Mallik, Kaushik
  id: 0834ff3c-6d72-11ec-94e0-b5b0a4fb8598
  last_name: Mallik
  orcid: 0000-0001-9864-7475
- first_name: Mateusz
  full_name: Rychlicki, Mateusz
  last_name: Rychlicki
- first_name: Anne-Kathrin
  full_name: Schmuck, Anne-Kathrin
  last_name: Schmuck
- first_name: Sadegh
  full_name: Soudjani, Sadegh
  last_name: Soudjani
citation:
  ama: Majumdar R, Mallik K, Rychlicki M, Schmuck A-K, Soudjani S. A flexible toolchain
    for symbolic rabin games under fair and stochastic uncertainties. 2023. doi:<a
    href="https://doi.org/10.5281/ZENODO.7877790">10.5281/ZENODO.7877790</a>
  apa: Majumdar, R., Mallik, K., Rychlicki, M., Schmuck, A.-K., &#38; Soudjani, S.
    (2023). A flexible toolchain for symbolic rabin games under fair and stochastic
    uncertainties. Zenodo. <a href="https://doi.org/10.5281/ZENODO.7877790">https://doi.org/10.5281/ZENODO.7877790</a>
  chicago: Majumdar, Rupak, Kaushik Mallik, Mateusz Rychlicki, Anne-Kathrin Schmuck,
    and Sadegh Soudjani. “A Flexible Toolchain for Symbolic Rabin Games under Fair
    and Stochastic Uncertainties.” Zenodo, 2023. <a href="https://doi.org/10.5281/ZENODO.7877790">https://doi.org/10.5281/ZENODO.7877790</a>.
  ieee: R. Majumdar, K. Mallik, M. Rychlicki, A.-K. Schmuck, and S. Soudjani, “A flexible
    toolchain for symbolic rabin games under fair and stochastic uncertainties.” Zenodo,
    2023.
  ista: Majumdar R, Mallik K, Rychlicki M, Schmuck A-K, Soudjani S. 2023. A flexible
    toolchain for symbolic rabin games under fair and stochastic uncertainties, Zenodo,
    <a href="https://doi.org/10.5281/ZENODO.7877790">10.5281/ZENODO.7877790</a>.
  mla: Majumdar, Rupak, et al. <i>A Flexible Toolchain for Symbolic Rabin Games under
    Fair and Stochastic Uncertainties</i>. Zenodo, 2023, doi:<a href="https://doi.org/10.5281/ZENODO.7877790">10.5281/ZENODO.7877790</a>.
  short: R. Majumdar, K. Mallik, M. Rychlicki, A.-K. Schmuck, S. Soudjani, (2023).
corr_author: '1'
date_created: 2024-02-14T15:13:00Z
date_published: 2023-04-28T00:00:00Z
date_updated: 2025-09-09T14:16:48Z
day: '28'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.5281/ZENODO.7877790
has_accepted_license: '1'
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5281/zenodo.7877790
month: '04'
oa: 1
oa_version: Published Version
publisher: Zenodo
related_material:
  record:
  - id: '14758'
    relation: used_in_publication
    status: public
status: public
title: A flexible toolchain for symbolic rabin games under fair and stochastic uncertainties
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2023'
...
---
_id: '14995'
abstract:
- lang: eng
  text: "Lincheck is a new practical and user-friendly framework for testing concurrent
    data structures on the Java Virtual Machine (JVM). It provides a simple and declarative
    way to write concurrent tests. Instead of describing how to perform the test,
    users specify what to test by declaring all the operations to examine; the framework
    automatically handles the rest. As a result, tests written with Lincheck are concise
    and easy to understand. \r\nThe artifact presents a collection of Lincheck tests
    that discover new bugs in popular libraries and implementations from the concurrency
    literature -- they are listed in Table 1, Section 3. To evaluate the performance
    of Lincheck analysis, the collection of tests also includes those which check
    correct data structures and, thus, always succeed. Similarly to Table 2, Section
    3, the experiments demonstrate the reasonable time to perform a test. Finally,
    Lincheck provides user-friendly output with an easy-to-follow trace to reproduce
    a detected error, significantly simplifying further investigation."
article_processing_charge: No
author:
- first_name: Nikita
  full_name: Koval, Nikita
  id: 2F4DB10C-F248-11E8-B48F-1D18A9856A87
  last_name: Koval
- first_name: Alexander
  full_name: Fedorov, Alexander
  id: 2e711909-896a-11ed-bdf8-eb0f5a2984c6
  last_name: Fedorov
- first_name: Maria
  full_name: Sokolova, Maria
  last_name: Sokolova
- first_name: Dmitry
  full_name: Tsitelov, Dmitry
  last_name: Tsitelov
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
citation:
  ama: 'Koval N, Fedorov A, Sokolova M, Tsitelov D, Alistarh D-A. Lincheck: A practical
    framework for testing concurrent data structures on JVM. 2023. doi:<a href="https://doi.org/10.5281/ZENODO.7877757">10.5281/ZENODO.7877757</a>'
  apa: 'Koval, N., Fedorov, A., Sokolova, M., Tsitelov, D., &#38; Alistarh, D.-A.
    (2023). Lincheck: A practical framework for testing concurrent data structures
    on JVM. Zenodo. <a href="https://doi.org/10.5281/ZENODO.7877757">https://doi.org/10.5281/ZENODO.7877757</a>'
  chicago: 'Koval, Nikita, Alexander Fedorov, Maria Sokolova, Dmitry Tsitelov, and
    Dan-Adrian Alistarh. “Lincheck: A Practical Framework for Testing Concurrent Data
    Structures on JVM.” Zenodo, 2023. <a href="https://doi.org/10.5281/ZENODO.7877757">https://doi.org/10.5281/ZENODO.7877757</a>.'
  ieee: 'N. Koval, A. Fedorov, M. Sokolova, D. Tsitelov, and D.-A. Alistarh, “Lincheck:
    A practical framework for testing concurrent data structures on JVM.” Zenodo,
    2023.'
  ista: 'Koval N, Fedorov A, Sokolova M, Tsitelov D, Alistarh D-A. 2023. Lincheck:
    A practical framework for testing concurrent data structures on JVM, Zenodo, <a
    href="https://doi.org/10.5281/ZENODO.7877757">10.5281/ZENODO.7877757</a>.'
  mla: 'Koval, Nikita, et al. <i>Lincheck: A Practical Framework for Testing Concurrent
    Data Structures on JVM</i>. Zenodo, 2023, doi:<a href="https://doi.org/10.5281/ZENODO.7877757">10.5281/ZENODO.7877757</a>.'
  short: N. Koval, A. Fedorov, M. Sokolova, D. Tsitelov, D.-A. Alistarh, (2023).
date_created: 2024-02-14T15:14:13Z
date_published: 2023-04-28T00:00:00Z
date_updated: 2025-09-09T12:51:51Z
day: '28'
ddc:
- '000'
department:
- _id: DaAl
doi: 10.5281/ZENODO.7877757
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5281/zenodo.7877757
month: '04'
oa: 1
oa_version: Published Version
publisher: Zenodo
related_material:
  record:
  - id: '14260'
    relation: used_in_publication
    status: public
status: public
title: 'Lincheck: A practical framework for testing concurrent data structures on
  JVM'
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2023'
...
---
_id: '15023'
abstract:
- lang: eng
  text: Reinforcement learning has shown promising results in learning neural network
    policies for complicated control tasks. However, the lack of formal guarantees
    about the behavior of such policies remains an impediment to their deployment.
    We propose a novel method for learning a composition of neural network policies
    in stochastic environments, along with a formal certificate which guarantees that
    a specification over the policy's behavior is satisfied with the desired probability.
    Unlike prior work on verifiable RL, our approach leverages the compositional nature
    of logical specifications provided in SpectRL, to learn over graphs of probabilistic
    reach-avoid specifications. The formal guarantees are provided by learning neural
    network policies together with reach-avoid supermartingales (RASM) for the graph’s
    sub-tasks and then composing them into a global policy. We also derive a tighter
    lower bound compared to previous work on the probability of reach-avoidance implied
    by a RASM, which is required to find a compositional policy with an acceptable
    probabilistic threshold for complex tasks with multiple edge policies. We implement
    a prototype of our approach and evaluate it on a Stochastic Nine Rooms environment.
acknowledgement: "This work was supported in part by the ERC-2020-AdG 101020093 (VAMOS)
  and the ERC-2020-\r\nCoG 863818 (FoRM-SMArt)."
alternative_title:
- NeurIPS
article_processing_charge: No
arxiv: 1
author:
- first_name: Dorde
  full_name: Zikelic, Dorde
  id: 294AA7A6-F248-11E8-B48F-1D18A9856A87
  last_name: Zikelic
  orcid: 0000-0002-4681-1699
- first_name: Mathias
  full_name: Lechner, Mathias
  id: 3DC22916-F248-11E8-B48F-1D18A9856A87
  last_name: Lechner
- first_name: Abhinav
  full_name: Verma, Abhinav
  id: a235593c-d7fa-11eb-a0c5-b22ca3c66ee6
  last_name: Verma
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000-0002-2985-7724
citation:
  ama: 'Zikelic D, Lechner M, Verma A, Chatterjee K, Henzinger TA. Compositional policy
    learning in stochastic control systems with formal guarantees. In: <i>37th Conference
    on Neural Information Processing Systems</i>. ; 2023.'
  apa: Zikelic, D., Lechner, M., Verma, A., Chatterjee, K., &#38; Henzinger, T. A.
    (2023). Compositional policy learning in stochastic control systems with formal
    guarantees. In <i>37th Conference on Neural Information Processing Systems</i>.
    New Orleans, LO, United States.
  chicago: Zikelic, Dorde, Mathias Lechner, Abhinav Verma, Krishnendu Chatterjee,
    and Thomas A Henzinger. “Compositional Policy Learning in Stochastic Control Systems
    with Formal Guarantees.” In <i>37th Conference on Neural Information Processing
    Systems</i>, 2023.
  ieee: D. Zikelic, M. Lechner, A. Verma, K. Chatterjee, and T. A. Henzinger, “Compositional
    policy learning in stochastic control systems with formal guarantees,” in <i>37th
    Conference on Neural Information Processing Systems</i>, New Orleans, LO, United
    States, 2023.
  ista: 'Zikelic D, Lechner M, Verma A, Chatterjee K, Henzinger TA. 2023. Compositional
    policy learning in stochastic control systems with formal guarantees. 37th Conference
    on Neural Information Processing Systems. NeurIPS: Neural Information Processing
    Systems, NeurIPS, .'
  mla: Zikelic, Dorde, et al. “Compositional Policy Learning in Stochastic Control
    Systems with Formal Guarantees.” <i>37th Conference on Neural Information Processing
    Systems</i>, 2023.
  short: D. Zikelic, M. Lechner, A. Verma, K. Chatterjee, T.A. Henzinger, in:, 37th
    Conference on Neural Information Processing Systems, 2023.
conference:
  end_date: 2023-12-16
  location: New Orleans, LO, United States
  name: 'NeurIPS: Neural Information Processing Systems'
  start_date: 2023-12-10
corr_author: '1'
date_created: 2024-02-25T09:23:24Z
date_published: 2023-12-15T00:00:00Z
date_updated: 2025-04-14T07:52:48Z
day: '15'
ddc:
- '000'
department:
- _id: ToHe
- _id: KrCh
ec_funded: 1
external_id:
  arxiv:
  - '2312.01456'
file:
- access_level: open_access
  checksum: 739c6d72506b778302d4e708723bf12c
  content_type: application/pdf
  creator: dernst
  date_created: 2024-07-22T11:45:17Z
  date_updated: 2024-07-22T11:45:17Z
  file_id: '17309'
  file_name: 2023_NeurIPS_Zikelic.pdf
  file_size: 562008
  relation: main_file
  success: 1
file_date_updated: 2024-07-22T11:45:17Z
has_accepted_license: '1'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
project:
- _id: 0599E47C-7A3F-11EA-A408-12923DDC885E
  call_identifier: H2020
  grant_number: '863818'
  name: 'Formal Methods for Stochastic Models: Algorithms and Applications'
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
  call_identifier: H2020
  grant_number: '101020093'
  name: Vigilant Algorithmic Monitoring of Software
publication: 37th Conference on Neural Information Processing Systems
publication_status: published
quality_controlled: '1'
status: public
title: Compositional policy learning in stochastic control systems with formal guarantees
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2023'
...
---
OA_place: publisher
OA_type: gold
_id: '15027'
abstract:
- lang: eng
  text: 'This data repository underpins the paper, published in PNAS (doi pending)
    and bioarxiv (doi: https://doi.org/10.1101/2023.07.05.547777).'
article_processing_charge: No
author:
- first_name: Samo
  full_name: Curk, Samo
  id: 031eff0d-d481-11ee-8508-cd12a7a86e5b
  last_name: Curk
  orcid: 0000-0001-6160-9766
citation:
  ama: Curk S. aggregation_data. 2023.
  apa: Curk, S. (2023). aggregation_data. Figshare.
  chicago: Curk, Samo. “Aggregation_data.” Figshare, 2023.
  ieee: S. Curk, “aggregation_data.” Figshare, 2023.
  ista: Curk S. 2023. aggregation_data, Figshare.
  mla: Curk, Samo. <i>Aggregation_data</i>. Figshare, 2023.
  short: S. Curk, (2023).
corr_author: '1'
date_created: 2024-02-26T08:37:57Z
date_published: 2023-12-13T00:00:00Z
date_updated: 2025-09-04T12:03:11Z
day: '13'
ddc:
- '570'
department:
- _id: AnSa
has_accepted_license: '1'
main_file_link:
- open_access: '1'
  url: https://figshare.com/s/85798bba4ebc68d822ed
month: '12'
oa: 1
oa_version: Published Version
publisher: Figshare
related_material:
  record:
  - id: '15001'
    relation: used_in_publication
    status: public
status: public
title: aggregation_data
tmp:
  image: /images/cc_0.png
  legal_code_url: https://creativecommons.org/publicdomain/zero/1.0/legalcode
  name: Creative Commons Public Domain Dedication (CC0 1.0)
  short: CC0 (1.0)
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2023'
...
---
_id: '15035'
abstract:
- lang: eng
  text: "This artifact aims to reproduce experiments from the paper Monitoring Hyperproperties
    With Prefix Transducers accepted at RV'23, and give further pointers to implementation
    of prefix transducers.\r\nIt has two parts: a pre-compiled docker image and sources
    that one can use to compile (locally or in docker) the software and run the experiments."
article_processing_charge: No
author:
- first_name: Marek
  full_name: Chalupa, Marek
  id: 87e34708-d6c6-11ec-9f5b-9391e7be2463
  last_name: Chalupa
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000-0002-2985-7724
citation:
  ama: Chalupa M, Henzinger TA. Monitoring hyperproperties with prefix transducers.
    2023. doi:<a href="https://doi.org/10.5281/ZENODO.8191723">10.5281/ZENODO.8191723</a>
  apa: Chalupa, M., &#38; Henzinger, T. A. (2023). Monitoring hyperproperties with
    prefix transducers. Zenodo. <a href="https://doi.org/10.5281/ZENODO.8191723">https://doi.org/10.5281/ZENODO.8191723</a>
  chicago: Chalupa, Marek, and Thomas A Henzinger. “Monitoring Hyperproperties with
    Prefix Transducers.” Zenodo, 2023. <a href="https://doi.org/10.5281/ZENODO.8191723">https://doi.org/10.5281/ZENODO.8191723</a>.
  ieee: M. Chalupa and T. A. Henzinger, “Monitoring hyperproperties with prefix transducers.”
    Zenodo, 2023.
  ista: Chalupa M, Henzinger TA. 2023. Monitoring hyperproperties with prefix transducers,
    Zenodo, <a href="https://doi.org/10.5281/ZENODO.8191723">10.5281/ZENODO.8191723</a>.
  mla: Chalupa, Marek, and Thomas A. Henzinger. <i>Monitoring Hyperproperties with
    Prefix Transducers</i>. Zenodo, 2023, doi:<a href="https://doi.org/10.5281/ZENODO.8191723">10.5281/ZENODO.8191723</a>.
  short: M. Chalupa, T.A. Henzinger, (2023).
corr_author: '1'
date_created: 2024-02-28T07:34:34Z
date_published: 2023-07-28T00:00:00Z
date_updated: 2025-04-14T09:42:55Z
day: '28'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.5281/ZENODO.8191723
ec_funded: 1
has_accepted_license: '1'
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5281/zenodo.8191722
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
  call_identifier: H2020
  grant_number: '101020093'
  name: Vigilant Algorithmic Monitoring of Software
publisher: Zenodo
related_material:
  record:
  - id: '14076'
    relation: used_in_publication
    status: public
status: public
title: Monitoring hyperproperties with prefix transducers
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2023'
...
---
OA_place: repository
_id: '15039'
abstract:
- lang: eng
  text: 'A crucial property for achieving secure, trustworthy and interpretable deep
    learning systems is their robustness: small changes to a system''s inputs should
    not result in large changes to its outputs. Mathematically, this means one strives
    for networks with a small Lipschitz constant. Several recent works have focused
    on how to construct such Lipschitz networks, typically by imposing constraints
    on the weight matrices. In this work, we study an orthogonal aspect, namely the
    role of the activation function. We show that commonly used activation functions,
    such as MaxMin, as well as all piece-wise linear ones with two segments unnecessarily
    restrict the class of representable functions, even in the simplest one-dimensional
    setting. We furthermore introduce the new N-activation function that is provably
    more expressive than currently popular activation functions. We provide code at
    this https URL.'
article_number: '2311.06103'
article_processing_charge: No
arxiv: 1
author:
- first_name: Bernd
  full_name: Prach, Bernd
  id: 2D561D42-C427-11E9-89B4-9C1AE6697425
  last_name: Prach
- first_name: Christoph
  full_name: Lampert, Christoph
  id: 40C20FD2-F248-11E8-B48F-1D18A9856A87
  last_name: Lampert
  orcid: 0000-0001-8622-7887
citation:
  ama: Prach B, Lampert C. 1-Lipschitz neural networks are more expressive with N-activations.
    <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/ARXIV.2311.06103">10.48550/ARXIV.2311.06103</a>
  apa: Prach, B., &#38; Lampert, C. (n.d.). 1-Lipschitz neural networks are more expressive
    with N-activations. <i>arXiv</i>. <a href="https://doi.org/10.48550/ARXIV.2311.06103">https://doi.org/10.48550/ARXIV.2311.06103</a>
  chicago: Prach, Bernd, and Christoph Lampert. “1-Lipschitz Neural Networks Are More
    Expressive with N-Activations.” <i>ArXiv</i>, n.d. <a href="https://doi.org/10.48550/ARXIV.2311.06103">https://doi.org/10.48550/ARXIV.2311.06103</a>.
  ieee: B. Prach and C. Lampert, “1-Lipschitz neural networks are more expressive
    with N-activations,” <i>arXiv</i>. .
  ista: Prach B, Lampert C. 1-Lipschitz neural networks are more expressive with N-activations.
    arXiv, 2311.06103.
  mla: Prach, Bernd, and Christoph Lampert. “1-Lipschitz Neural Networks Are More
    Expressive with N-Activations.” <i>ArXiv</i>, 2311.06103, doi:<a href="https://doi.org/10.48550/ARXIV.2311.06103">10.48550/ARXIV.2311.06103</a>.
  short: B. Prach, C. Lampert, ArXiv (n.d.).
corr_author: '1'
date_created: 2024-02-28T17:59:32Z
date_published: 2023-11-10T00:00:00Z
date_updated: 2026-04-07T11:49:51Z
day: '10'
department:
- _id: GradSch
- _id: ChLa
doi: 10.48550/ARXIV.2311.06103
external_id:
  arxiv:
  - '2311.06103'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2311.06103
month: '11'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: draft
related_material:
  record:
  - id: '19759'
    relation: dissertation_contains
    status: public
status: public
title: 1-Lipschitz neural networks are more expressive with N-activations
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: preprint
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2023'
...
---
_id: '15085'
abstract:
- lang: eng
  text: The hydrogen-rich outer layers of massive stars can be removed by interactions
    with a binary companion. Theoretical models predict that this stripping produces
    a population of hot helium stars of ~2 to 8 solar masses (M☉), however, only one
    such system has been identified thus far. We used ultraviolet photometry to identify
    potential stripped helium stars then investigated 25 of them using optical spectroscopy.
    We identified stars with high temperatures (~60,000 to 100,000 kelvin), high surface
    gravities, and hydrogen-depleted surfaces; 16 stars also showed binary motion.
    These properties match expectations for stars with initial masses of 8 to 25 M☉
    that were stripped by binary interaction. Their masses fall in the gap between
    subdwarf helium stars and Wolf-Rayet stars. We propose that these stars could
    be progenitors of stripped-envelope supernovae.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: M. R.
  full_name: Drout, M. R.
  last_name: Drout
- first_name: Ylva Louise Linsdotter
  full_name: Götberg, Ylva Louise Linsdotter
  id: d0648d0c-0f64-11ee-a2e0-dd0faa2e4f7d
  last_name: Götberg
  orcid: 0000-0002-6960-6911
- first_name: B. A.
  full_name: Ludwig, B. A.
  last_name: Ludwig
- first_name: J. H.
  full_name: Groh, J. H.
  last_name: Groh
- first_name: S. E.
  full_name: de Mink, S. E.
  last_name: de Mink
- first_name: A. J. G.
  full_name: O’Grady, A. J. G.
  last_name: O’Grady
- first_name: N.
  full_name: Smith, N.
  last_name: Smith
citation:
  ama: Drout MR, Götberg YLL, Ludwig BA, et al. An observed population of intermediate-mass
    helium stars that have been stripped in binaries. <i>Science</i>. 2023;382(6676):1287-1291.
    doi:<a href="https://doi.org/10.1126/science.ade4970">10.1126/science.ade4970</a>
  apa: Drout, M. R., Götberg, Y. L. L., Ludwig, B. A., Groh, J. H., de Mink, S. E.,
    O’Grady, A. J. G., &#38; Smith, N. (2023). An observed population of intermediate-mass
    helium stars that have been stripped in binaries. <i>Science</i>. American Association
    for the Advancement of Science. <a href="https://doi.org/10.1126/science.ade4970">https://doi.org/10.1126/science.ade4970</a>
  chicago: Drout, M. R., Ylva Louise Linsdotter Götberg, B. A. Ludwig, J. H. Groh,
    S. E. de Mink, A. J. G. O’Grady, and N. Smith. “An Observed Population of Intermediate-Mass
    Helium Stars That Have Been Stripped in Binaries.” <i>Science</i>. American Association
    for the Advancement of Science, 2023. <a href="https://doi.org/10.1126/science.ade4970">https://doi.org/10.1126/science.ade4970</a>.
  ieee: M. R. Drout <i>et al.</i>, “An observed population of intermediate-mass helium
    stars that have been stripped in binaries,” <i>Science</i>, vol. 382, no. 6676.
    American Association for the Advancement of Science, pp. 1287–1291, 2023.
  ista: Drout MR, Götberg YLL, Ludwig BA, Groh JH, de Mink SE, O’Grady AJG, Smith
    N. 2023. An observed population of intermediate-mass helium stars that have been
    stripped in binaries. Science. 382(6676), 1287–1291.
  mla: Drout, M. R., et al. “An Observed Population of Intermediate-Mass Helium Stars
    That Have Been Stripped in Binaries.” <i>Science</i>, vol. 382, no. 6676, American
    Association for the Advancement of Science, 2023, pp. 1287–91, doi:<a href="https://doi.org/10.1126/science.ade4970">10.1126/science.ade4970</a>.
  short: M.R. Drout, Y.L.L. Götberg, B.A. Ludwig, J.H. Groh, S.E. de Mink, A.J.G.
    O’Grady, N. Smith, Science 382 (2023) 1287–1291.
date_created: 2024-03-05T09:40:28Z
date_published: 2023-12-14T00:00:00Z
date_updated: 2024-10-14T12:32:01Z
day: '14'
doi: 10.1126/science.ade4970
extern: '1'
external_id:
  arxiv:
  - '2307.00061'
  pmid:
  - '38096420'
intvolume: '       382'
issue: '6676'
keyword:
- Stellar Astrophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2307.00061
month: '12'
oa: 1
oa_version: None
page: 1287-1291
pmid: 1
publication: Science
publication_identifier:
  eissn:
  - 1095-9203
  issn:
  - 0036-8075
publication_status: published
publisher: American Association for the Advancement of Science
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA Website
    relation: press_release
    url: https://ista.ac.at/en/news/reaching-for-the-invisible-stars/
scopus_import: '1'
status: public
title: An observed population of intermediate-mass helium stars that have been stripped
  in binaries
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 382
year: '2023'
...
---
_id: '15129'
abstract:
- lang: eng
  text: Type I CRISPR-Cas systems employ multi-subunit Cascade effector complexes
    to target foreign nucleic acids for destruction. Here, we present structures of
    D. vulgaris type I-C Cascade at various stages of double-stranded (ds)DNA target
    capture, revealing mechanisms that underpin PAM recognition and Cascade allosteric
    activation. We uncover an interesting mechanism of non-target strand (NTS) DNA
    stabilization via stacking interactions with the “belly” subunits, securing the
    NTS in place. This “molecular seatbelt” mechanism facilitates efficient R-loop
    formation and prevents dsDNA reannealing. Additionally, we provide structural
    insights into how two anti-CRISPR (Acr) proteins utilize distinct strategies to
    achieve a shared mechanism of type I-C Cascade inhibition by blocking PAM scanning.
    These observations form a structural basis for directional R-loop formation and
    reveal how different Acr proteins have converged upon common molecular mechanisms
    to efficiently shut down CRISPR immunity.
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Roisin E.
  full_name: O’Brien, Roisin E.
  last_name: O’Brien
- first_name: Jack Peter Kelly
  full_name: Bravo, Jack Peter Kelly
  id: 96aecfa5-8931-11ee-af30-aa6a5d6eee0e
  last_name: Bravo
  orcid: 0000-0003-0456-0753
- first_name: Delisa
  full_name: Ramos, Delisa
  last_name: Ramos
- first_name: Grace N.
  full_name: Hibshman, Grace N.
  last_name: Hibshman
- first_name: Jacquelyn T.
  full_name: Wright, Jacquelyn T.
  last_name: Wright
- first_name: David W.
  full_name: Taylor, David W.
  last_name: Taylor
citation:
  ama: O’Brien RE, Bravo JPK, Ramos D, Hibshman GN, Wright JT, Taylor DW. Structural
    snapshots of R-loop formation by a type I-C CRISPR Cascade. <i>Molecular Cell</i>.
    2023;83(5):746-758.e5. doi:<a href="https://doi.org/10.1016/j.molcel.2023.01.024">10.1016/j.molcel.2023.01.024</a>
  apa: O’Brien, R. E., Bravo, J. P. K., Ramos, D., Hibshman, G. N., Wright, J. T.,
    &#38; Taylor, D. W. (2023). Structural snapshots of R-loop formation by a type
    I-C CRISPR Cascade. <i>Molecular Cell</i>. Elsevier. <a href="https://doi.org/10.1016/j.molcel.2023.01.024">https://doi.org/10.1016/j.molcel.2023.01.024</a>
  chicago: O’Brien, Roisin E., Jack Peter Kelly Bravo, Delisa Ramos, Grace N. Hibshman,
    Jacquelyn T. Wright, and David W. Taylor. “Structural Snapshots of R-Loop Formation
    by a Type I-C CRISPR Cascade.” <i>Molecular Cell</i>. Elsevier, 2023. <a href="https://doi.org/10.1016/j.molcel.2023.01.024">https://doi.org/10.1016/j.molcel.2023.01.024</a>.
  ieee: R. E. O’Brien, J. P. K. Bravo, D. Ramos, G. N. Hibshman, J. T. Wright, and
    D. W. Taylor, “Structural snapshots of R-loop formation by a type I-C CRISPR Cascade,”
    <i>Molecular Cell</i>, vol. 83, no. 5. Elsevier, p. 746–758.e5, 2023.
  ista: O’Brien RE, Bravo JPK, Ramos D, Hibshman GN, Wright JT, Taylor DW. 2023. Structural
    snapshots of R-loop formation by a type I-C CRISPR Cascade. Molecular Cell. 83(5),
    746–758.e5.
  mla: O’Brien, Roisin E., et al. “Structural Snapshots of R-Loop Formation by a Type
    I-C CRISPR Cascade.” <i>Molecular Cell</i>, vol. 83, no. 5, Elsevier, 2023, p.
    746–758.e5, doi:<a href="https://doi.org/10.1016/j.molcel.2023.01.024">10.1016/j.molcel.2023.01.024</a>.
  short: R.E. O’Brien, J.P.K. Bravo, D. Ramos, G.N. Hibshman, J.T. Wright, D.W. Taylor,
    Molecular Cell 83 (2023) 746–758.e5.
date_created: 2024-03-20T10:40:56Z
date_published: 2023-03-02T00:00:00Z
date_updated: 2024-06-04T06:33:54Z
day: '02'
doi: 10.1016/j.molcel.2023.01.024
extern: '1'
external_id:
  pmid:
  - '36805026'
intvolume: '        83'
issue: '5'
keyword:
- Cell Biology
- Molecular Biology
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1016/j.molcel.2023.01.024
month: '03'
oa: 1
oa_version: Published Version
page: 746-758.e5
pmid: 1
publication: Molecular Cell
publication_identifier:
  issn:
  - 1097-2765
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Structural snapshots of R-loop formation by a type I-C CRISPR Cascade
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 83
year: '2023'
...
---
_id: '15130'
abstract:
- lang: eng
  text: Cas12a2 is a CRISPR-associated nuclease that performs RNA-guided, sequence-nonspecific
    degradation of single-stranded RNA, single-stranded DNA and double-stranded DNA
    following recognition of a complementary RNA target, culminating in abortive infection<jats:sup>1</jats:sup>.
    Here we report structures of Cas12a2 in binary, ternary and quaternary complexes
    to reveal a complete activation pathway. Our structures reveal that Cas12a2 is
    autoinhibited until binding a cognate RNA target, which exposes the RuvC active
    site within a large, positively charged cleft. Double-stranded DNA substrates
    are captured through duplex distortion and local melting, stabilized by pairs
    of ‘aromatic clamp’ residues that are crucial for double-stranded DNA degradation
    and in vivo immune system function. Our work provides a structural basis for this
    mechanism of abortive infection to achieve population-level immunity, which can
    be leveraged to create rational mutants that degrade a spectrum of collateral
    substrates.
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Jack Peter Kelly
  full_name: Bravo, Jack Peter Kelly
  id: 96aecfa5-8931-11ee-af30-aa6a5d6eee0e
  last_name: Bravo
  orcid: 0000-0003-0456-0753
- first_name: Thomson
  full_name: Hallmark, Thomson
  last_name: Hallmark
- first_name: Bronson
  full_name: Naegle, Bronson
  last_name: Naegle
- first_name: Chase L.
  full_name: Beisel, Chase L.
  last_name: Beisel
- first_name: Ryan N.
  full_name: Jackson, Ryan N.
  last_name: Jackson
- first_name: David W.
  full_name: Taylor, David W.
  last_name: Taylor
citation:
  ama: Bravo JPK, Hallmark T, Naegle B, Beisel CL, Jackson RN, Taylor DW. RNA targeting
    unleashes indiscriminate nuclease activity of CRISPR–Cas12a2. <i>Nature</i>. 2023;613(7944):582-587.
    doi:<a href="https://doi.org/10.1038/s41586-022-05560-w">10.1038/s41586-022-05560-w</a>
  apa: Bravo, J. P. K., Hallmark, T., Naegle, B., Beisel, C. L., Jackson, R. N., &#38;
    Taylor, D. W. (2023). RNA targeting unleashes indiscriminate nuclease activity
    of CRISPR–Cas12a2. <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/s41586-022-05560-w">https://doi.org/10.1038/s41586-022-05560-w</a>
  chicago: Bravo, Jack Peter Kelly, Thomson Hallmark, Bronson Naegle, Chase L. Beisel,
    Ryan N. Jackson, and David W. Taylor. “RNA Targeting Unleashes Indiscriminate
    Nuclease Activity of CRISPR–Cas12a2.” <i>Nature</i>. Springer Nature, 2023. <a
    href="https://doi.org/10.1038/s41586-022-05560-w">https://doi.org/10.1038/s41586-022-05560-w</a>.
  ieee: J. P. K. Bravo, T. Hallmark, B. Naegle, C. L. Beisel, R. N. Jackson, and D.
    W. Taylor, “RNA targeting unleashes indiscriminate nuclease activity of CRISPR–Cas12a2,”
    <i>Nature</i>, vol. 613, no. 7944. Springer Nature, pp. 582–587, 2023.
  ista: Bravo JPK, Hallmark T, Naegle B, Beisel CL, Jackson RN, Taylor DW. 2023. RNA
    targeting unleashes indiscriminate nuclease activity of CRISPR–Cas12a2. Nature.
    613(7944), 582–587.
  mla: Bravo, Jack Peter Kelly, et al. “RNA Targeting Unleashes Indiscriminate Nuclease
    Activity of CRISPR–Cas12a2.” <i>Nature</i>, vol. 613, no. 7944, Springer Nature,
    2023, pp. 582–87, doi:<a href="https://doi.org/10.1038/s41586-022-05560-w">10.1038/s41586-022-05560-w</a>.
  short: J.P.K. Bravo, T. Hallmark, B. Naegle, C.L. Beisel, R.N. Jackson, D.W. Taylor,
    Nature 613 (2023) 582–587.
date_created: 2024-03-20T10:41:36Z
date_published: 2023-01-04T00:00:00Z
date_updated: 2024-06-04T06:30:59Z
day: '04'
doi: 10.1038/s41586-022-05560-w
extern: '1'
external_id:
  pmid:
  - '36599980'
intvolume: '       613'
issue: '7944'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1038/s41586-022-05560-w
month: '01'
oa: 1
oa_version: Published Version
page: 582-587
pmid: 1
publication: Nature
publication_identifier:
  eissn:
  - 1476-4687
  issn:
  - 0028-0836
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: RNA targeting unleashes indiscriminate nuclease activity of CRISPR–Cas12a2
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 613
year: '2023'
...
---
_id: '15148'
abstract:
- lang: eng
  text: 'The basic helix–loop–helix (bHLH) family of transcription factors recognizes
    DNA motifs known as E-boxes (CANNTG) and includes 108 members<jats:sup>1</jats:sup>.
    Here we investigate how chromatinized E-boxes are engaged by two structurally
    diverse bHLH proteins: the proto-oncogene MYC-MAX and the circadian transcription
    factor CLOCK-BMAL1 (refs. <jats:sup>2,3</jats:sup>). Both transcription factors
    bind to E-boxes preferentially near the nucleosomal entry–exit sites. Structural
    studies with engineered or native nucleosome sequences show that MYC-MAX or CLOCK-BMAL1
    triggers the release of DNA from histones to gain access. Atop the H2A–H2B acidic
    patch<jats:sup>4</jats:sup>, the CLOCK-BMAL1 Per-Arnt-Sim (PAS) dimerization domains
    engage the histone octamer disc. Binding of tandem E-boxes<jats:sup>5–7</jats:sup>
    at endogenous DNA sequences occurs through direct interactions between two CLOCK-BMAL1
    protomers and histones and is important for circadian cycling. At internal E-boxes,
    the MYC-MAX leucine zipper can also interact with histones H2B and H3, and its
    binding is indirectly enhanced by OCT4 elsewhere on the nucleosome. The nucleosomal
    E-box position and the type of bHLH dimerization domain jointly determine the
    histone contact, the affinity and the degree of competition and cooperativity
    with other nucleosome-bound factors.'
article_processing_charge: No
article_type: original
author:
- first_name: Alicia
  full_name: Michael, Alicia
  id: 6437c950-2a03-11ee-914d-d6476dd7b75c
  last_name: Michael
  orcid: 0000-0002-6080-839X
- first_name: Lisa
  full_name: Stoos, Lisa
  last_name: Stoos
- first_name: Priya
  full_name: Crosby, Priya
  last_name: Crosby
- first_name: Nikolas
  full_name: Eggers, Nikolas
  last_name: Eggers
- first_name: Xinyu Y.
  full_name: Nie, Xinyu Y.
  last_name: Nie
- first_name: Kristina
  full_name: Makasheva, Kristina
  last_name: Makasheva
- first_name: Martina
  full_name: Minnich, Martina
  last_name: Minnich
- first_name: Kelly L.
  full_name: Healy, Kelly L.
  last_name: Healy
- first_name: Joscha
  full_name: Weiss, Joscha
  last_name: Weiss
- first_name: Georg
  full_name: Kempf, Georg
  last_name: Kempf
- first_name: Simone
  full_name: Cavadini, Simone
  last_name: Cavadini
- first_name: Lukas
  full_name: Kater, Lukas
  last_name: Kater
- first_name: Jan
  full_name: Seebacher, Jan
  last_name: Seebacher
- first_name: Luca
  full_name: Vecchia, Luca
  last_name: Vecchia
- first_name: Deyasini
  full_name: Chakraborty, Deyasini
  last_name: Chakraborty
- first_name: Luke
  full_name: Isbel, Luke
  last_name: Isbel
- first_name: Ralph S.
  full_name: Grand, Ralph S.
  last_name: Grand
- first_name: Florian
  full_name: Andersch, Florian
  last_name: Andersch
- first_name: Jennifer L.
  full_name: Fribourgh, Jennifer L.
  last_name: Fribourgh
- first_name: Dirk
  full_name: Schübeler, Dirk
  last_name: Schübeler
- first_name: Johannes
  full_name: Zuber, Johannes
  last_name: Zuber
- first_name: Andrew C.
  full_name: Liu, Andrew C.
  last_name: Liu
- first_name: Peter B.
  full_name: Becker, Peter B.
  last_name: Becker
- first_name: Beat
  full_name: Fierz, Beat
  last_name: Fierz
- first_name: Carrie L.
  full_name: Partch, Carrie L.
  last_name: Partch
- first_name: Jerome S.
  full_name: Menet, Jerome S.
  last_name: Menet
- first_name: Nicolas H.
  full_name: Thomä, Nicolas H.
  last_name: Thomä
citation:
  ama: Michael AK, Stoos L, Crosby P, et al. Cooperation between bHLH transcription
    factors and histones for DNA access. <i>Nature</i>. 2023;619(7969):385-393. doi:<a
    href="https://doi.org/10.1038/s41586-023-06282-3">10.1038/s41586-023-06282-3</a>
  apa: Michael, A. K., Stoos, L., Crosby, P., Eggers, N., Nie, X. Y., Makasheva, K.,
    … Thomä, N. H. (2023). Cooperation between bHLH transcription factors and histones
    for DNA access. <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/s41586-023-06282-3">https://doi.org/10.1038/s41586-023-06282-3</a>
  chicago: Michael, Alicia K., Lisa Stoos, Priya Crosby, Nikolas Eggers, Xinyu Y.
    Nie, Kristina Makasheva, Martina Minnich, et al. “Cooperation between BHLH Transcription
    Factors and Histones for DNA Access.” <i>Nature</i>. Springer Nature, 2023. <a
    href="https://doi.org/10.1038/s41586-023-06282-3">https://doi.org/10.1038/s41586-023-06282-3</a>.
  ieee: A. K. Michael <i>et al.</i>, “Cooperation between bHLH transcription factors
    and histones for DNA access,” <i>Nature</i>, vol. 619, no. 7969. Springer Nature,
    pp. 385–393, 2023.
  ista: Michael AK, Stoos L, Crosby P, Eggers N, Nie XY, Makasheva K, Minnich M, Healy
    KL, Weiss J, Kempf G, Cavadini S, Kater L, Seebacher J, Vecchia L, Chakraborty
    D, Isbel L, Grand RS, Andersch F, Fribourgh JL, Schübeler D, Zuber J, Liu AC,
    Becker PB, Fierz B, Partch CL, Menet JS, Thomä NH. 2023. Cooperation between bHLH
    transcription factors and histones for DNA access. Nature. 619(7969), 385–393.
  mla: Michael, Alicia K., et al. “Cooperation between BHLH Transcription Factors
    and Histones for DNA Access.” <i>Nature</i>, vol. 619, no. 7969, Springer Nature,
    2023, pp. 385–93, doi:<a href="https://doi.org/10.1038/s41586-023-06282-3">10.1038/s41586-023-06282-3</a>.
  short: A.K. Michael, L. Stoos, P. Crosby, N. Eggers, X.Y. Nie, K. Makasheva, M.
    Minnich, K.L. Healy, J. Weiss, G. Kempf, S. Cavadini, L. Kater, J. Seebacher,
    L. Vecchia, D. Chakraborty, L. Isbel, R.S. Grand, F. Andersch, J.L. Fribourgh,
    D. Schübeler, J. Zuber, A.C. Liu, P.B. Becker, B. Fierz, C.L. Partch, J.S. Menet,
    N.H. Thomä, Nature 619 (2023) 385–393.
date_created: 2024-03-21T07:52:44Z
date_published: 2023-07-05T00:00:00Z
date_updated: 2024-03-25T12:42:29Z
day: '05'
doi: 10.1038/s41586-023-06282-3
extern: '1'
intvolume: '       619'
issue: '7969'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1038/s41586-023-06282-3
month: '07'
oa: 1
oa_version: Published Version
page: 385-393
publication: Nature
publication_identifier:
  eissn:
  - 1476-4687
  issn:
  - 0028-0836
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Cooperation between bHLH transcription factors and histones for DNA access
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 619
year: '2023'
...
---
_id: '15149'
abstract:
- lang: eng
  text: The genomic binding sites of the transcription factor (TF) and tumor suppressor
    p53 are unusually diverse with regard to their chromatin features, including histone
    modifications, raising the possibility that the local chromatin environment can
    contextualize p53 regulation. Here, we show that epigenetic characteristics of
    closed chromatin, such as DNA methylation, do not influence the binding of p53
    across the genome. Instead, the ability of p53 to open chromatin and activate
    its target genes is locally restricted by its cofactor Trim24. Trim24 binds to
    both p53 and unmethylated histone 3 lysine 4 (H3K4), thereby preferentially localizing
    to those p53 sites that reside in closed chromatin, whereas it is deterred from
    accessible chromatin by H3K4 methylation. The presence of Trim24 increases cell
    viability upon stress and enables p53 to affect gene expression as a function
    of the local chromatin state. These findings link H3K4 methylation to p53 function
    and illustrate how specificity in chromatin can be achieved, not by TF-intrinsic
    sensitivity to histone modifications, but by employing chromatin-sensitive cofactors
    that locally modulate TF function.
article_processing_charge: No
article_type: original
author:
- first_name: Luke
  full_name: Isbel, Luke
  last_name: Isbel
- first_name: Murat
  full_name: Iskar, Murat
  last_name: Iskar
- first_name: Sevi
  full_name: Durdu, Sevi
  last_name: Durdu
- first_name: Joscha
  full_name: Weiss, Joscha
  last_name: Weiss
- first_name: Ralph S.
  full_name: Grand, Ralph S.
  last_name: Grand
- first_name: Eric
  full_name: Hietter-Pfeiffer, Eric
  last_name: Hietter-Pfeiffer
- first_name: Zuzanna
  full_name: Kozicka, Zuzanna
  last_name: Kozicka
- first_name: Alicia
  full_name: Michael, Alicia
  id: 6437c950-2a03-11ee-914d-d6476dd7b75c
  last_name: Michael
  orcid: 0000-0002-6080-839X
- first_name: Lukas
  full_name: Burger, Lukas
  last_name: Burger
- first_name: Nicolas H.
  full_name: Thomä, Nicolas H.
  last_name: Thomä
- first_name: Dirk
  full_name: Schübeler, Dirk
  last_name: Schübeler
citation:
  ama: Isbel L, Iskar M, Durdu S, et al. Readout of histone methylation by Trim24
    locally restricts chromatin opening by p53. <i>Nature Structural &#38; Molecular
    Biology</i>. 2023;30(7):948-957. doi:<a href="https://doi.org/10.1038/s41594-023-01021-8">10.1038/s41594-023-01021-8</a>
  apa: Isbel, L., Iskar, M., Durdu, S., Weiss, J., Grand, R. S., Hietter-Pfeiffer,
    E., … Schübeler, D. (2023). Readout of histone methylation by Trim24 locally restricts
    chromatin opening by p53. <i>Nature Structural &#38; Molecular Biology</i>. Springer
    Nature. <a href="https://doi.org/10.1038/s41594-023-01021-8">https://doi.org/10.1038/s41594-023-01021-8</a>
  chicago: Isbel, Luke, Murat Iskar, Sevi Durdu, Joscha Weiss, Ralph S. Grand, Eric
    Hietter-Pfeiffer, Zuzanna Kozicka, et al. “Readout of Histone Methylation by Trim24
    Locally Restricts Chromatin Opening by P53.” <i>Nature Structural &#38; Molecular
    Biology</i>. Springer Nature, 2023. <a href="https://doi.org/10.1038/s41594-023-01021-8">https://doi.org/10.1038/s41594-023-01021-8</a>.
  ieee: L. Isbel <i>et al.</i>, “Readout of histone methylation by Trim24 locally
    restricts chromatin opening by p53,” <i>Nature Structural &#38; Molecular Biology</i>,
    vol. 30, no. 7. Springer Nature, pp. 948–957, 2023.
  ista: Isbel L, Iskar M, Durdu S, Weiss J, Grand RS, Hietter-Pfeiffer E, Kozicka
    Z, Michael AK, Burger L, Thomä NH, Schübeler D. 2023. Readout of histone methylation
    by Trim24 locally restricts chromatin opening by p53. Nature Structural &#38;
    Molecular Biology. 30(7), 948–957.
  mla: Isbel, Luke, et al. “Readout of Histone Methylation by Trim24 Locally Restricts
    Chromatin Opening by P53.” <i>Nature Structural &#38; Molecular Biology</i>, vol.
    30, no. 7, Springer Nature, 2023, pp. 948–57, doi:<a href="https://doi.org/10.1038/s41594-023-01021-8">10.1038/s41594-023-01021-8</a>.
  short: L. Isbel, M. Iskar, S. Durdu, J. Weiss, R.S. Grand, E. Hietter-Pfeiffer,
    Z. Kozicka, A.K. Michael, L. Burger, N.H. Thomä, D. Schübeler, Nature Structural
    &#38; Molecular Biology 30 (2023) 948–957.
date_created: 2024-03-21T07:53:24Z
date_published: 2023-06-29T00:00:00Z
date_updated: 2024-03-25T12:37:20Z
day: '29'
doi: 10.1038/s41594-023-01021-8
extern: '1'
external_id:
  pmid:
  - '37386214'
intvolume: '        30'
issue: '7'
keyword:
- Molecular Biology
- Structural Biology
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1038/s41594-023-01021-8
month: '06'
oa: 1
oa_version: Published Version
page: 948-957
pmid: 1
publication: Nature Structural & Molecular Biology
publication_identifier:
  eissn:
  - 1545-9985
  issn:
  - 1545-9993
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Readout of histone methylation by Trim24 locally restricts chromatin opening
  by p53
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 30
year: '2023'
...
---
_id: '15173'
abstract:
- lang: eng
  text: 'We show that the number of linear spaces on a set of n points and the number
    of rank-3 matroids on a ground set of size n are both of the form (cn+o(n))n2/6,
    where c=e3√/2−3(1+3–√)/2. This is the final piece of the puzzle for enumerating
    fixed-rank matroids at this level of accuracy: the numbers of rank-1 and rank-2
    matroids on a ground set of size n have exact representations in terms of well-known
    combinatorial functions, and it was recently proved by van der Hofstad, Pendavingh,
    and van der Pol that for constant r≥4 there are (e1−rn+o(n))nr−1/r! rank-r matroids
    on a ground set of size n. In our proof, we introduce a new approach for bounding
    the number of clique decompositions of a complete graph, using quasirandomness
    instead of the so-called entropy method that is common in this area.'
acknowledgement: "Sah and Sawhney were supported by NSF Graduate Research Fellowship
  Program DGE-1745302. Sah was supported by the PD Soros Fellowship.\r\nWe thank Michael
  Simkin for helpful comments on the manuscript. We thank Zach Hunter for\r\nseveral
  corrections."
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Matthew Alan
  full_name: Kwan, Matthew Alan
  id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3
  last_name: Kwan
  orcid: 0000-0002-4003-7567
- first_name: Ashwin
  full_name: Sah, Ashwin
  last_name: Sah
- first_name: Mehtaab
  full_name: Sawhney, Mehtaab
  last_name: Sawhney
citation:
  ama: Kwan MA, Sah A, Sawhney M. Enumerating matroids and linear spaces. <i>Comptes
    Rendus Mathematique</i>. 2023;361(G2):565-575. doi:<a href="https://doi.org/10.5802/crmath.423">10.5802/crmath.423</a>
  apa: Kwan, M. A., Sah, A., &#38; Sawhney, M. (2023). Enumerating matroids and linear
    spaces. <i>Comptes Rendus Mathematique</i>. Academie des Sciences. <a href="https://doi.org/10.5802/crmath.423">https://doi.org/10.5802/crmath.423</a>
  chicago: Kwan, Matthew Alan, Ashwin Sah, and Mehtaab Sawhney. “Enumerating Matroids
    and Linear Spaces.” <i>Comptes Rendus Mathematique</i>. Academie des Sciences,
    2023. <a href="https://doi.org/10.5802/crmath.423">https://doi.org/10.5802/crmath.423</a>.
  ieee: M. A. Kwan, A. Sah, and M. Sawhney, “Enumerating matroids and linear spaces,”
    <i>Comptes Rendus Mathematique</i>, vol. 361, no. G2. Academie des Sciences, pp.
    565–575, 2023.
  ista: Kwan MA, Sah A, Sawhney M. 2023. Enumerating matroids and linear spaces. Comptes
    Rendus Mathematique. 361(G2), 565–575.
  mla: Kwan, Matthew Alan, et al. “Enumerating Matroids and Linear Spaces.” <i>Comptes
    Rendus Mathematique</i>, vol. 361, no. G2, Academie des Sciences, 2023, pp. 565–75,
    doi:<a href="https://doi.org/10.5802/crmath.423">10.5802/crmath.423</a>.
  short: M.A. Kwan, A. Sah, M. Sawhney, Comptes Rendus Mathematique 361 (2023) 565–575.
date_created: 2024-03-24T23:01:00Z
date_published: 2023-02-01T00:00:00Z
date_updated: 2025-09-09T14:26:32Z
day: '01'
ddc:
- '510'
department:
- _id: MaKw
doi: 10.5802/crmath.423
external_id:
  arxiv:
  - '2112.03788'
  isi:
  - '001167671400009'
file:
- access_level: open_access
  checksum: d1d0e0a854a79ae95fb66d75d9117a68
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  creator: dernst
  date_created: 2024-03-25T07:21:52Z
  date_updated: 2024-03-25T07:21:52Z
  file_id: '15174'
  file_name: 2023_ComptesRendusMath_Kwan.pdf
  file_size: 598097
  relation: main_file
  success: 1
file_date_updated: 2024-03-25T07:21:52Z
has_accepted_license: '1'
intvolume: '       361'
isi: 1
issue: G2
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: 565-575
publication: Comptes Rendus Mathematique
publication_identifier:
  eissn:
  - 1778-3569
  issn:
  - 1631-073X
publication_status: published
publisher: Academie des Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: Enumerating matroids and linear spaces
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 361
year: '2023'
...
---
_id: '15190'
abstract:
- lang: eng
  text: We report on IXPE, NICER, and XMM–Newton observations of the magnetar 1E 2259+586.
    We find that the source is significantly polarized at about or above 20  per cent
    for all phases except for the secondary peak where it is more weakly polarized.
    The polarization degree is strongest during the primary minimum which is also
    the phase where an absorption feature has been identified previously. The polarization
    angle of the photons are consistent with a rotating vector model with a mode switch
    between the primary minimum and the rest of the rotation of the neutron star.
    We propose a scenario in which the emission at the source is weakly polarized
    (as in a condensed surface) and, as the radiation passes through a plasma arch,
    resonant cyclotron scattering off of protons produces the observed polarized radiation.
    This confirms the magnetar nature of the source with a surface field greater than
    about 1015 G.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Jeremy
  full_name: Heyl, Jeremy
  last_name: Heyl
- first_name: Roberto
  full_name: Taverna, Roberto
  last_name: Taverna
- first_name: Roberto
  full_name: Turolla, Roberto
  last_name: Turolla
- first_name: Gian Luca
  full_name: Israel, Gian Luca
  last_name: Israel
- first_name: Mason
  full_name: Ng, Mason
  last_name: Ng
- first_name: Demet
  full_name: Kırmızıbayrak, Demet
  last_name: Kırmızıbayrak
- first_name: Denis
  full_name: González-Caniulef, Denis
  last_name: González-Caniulef
- first_name: Ilaria
  full_name: Caiazzo, Ilaria
  id: 8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d
  last_name: Caiazzo
  orcid: 0000-0002-4770-5388
- first_name: Silvia
  full_name: Zane, Silvia
  last_name: Zane
- first_name: Steven R
  full_name: Ehlert, Steven R
  last_name: Ehlert
- first_name: Michela
  full_name: Negro, Michela
  last_name: Negro
- first_name: Iván
  full_name: Agudo, Iván
  last_name: Agudo
- first_name: Lucio Angelo
  full_name: Antonelli, Lucio Angelo
  last_name: Antonelli
- first_name: Matteo
  full_name: Bachetti, Matteo
  last_name: Bachetti
- first_name: Luca
  full_name: Baldini, Luca
  last_name: Baldini
- first_name: Wayne H
  full_name: Baumgartner, Wayne H
  last_name: Baumgartner
- first_name: Ronaldo
  full_name: Bellazzini, Ronaldo
  last_name: Bellazzini
- first_name: Stefano
  full_name: Bianchi, Stefano
  last_name: Bianchi
- first_name: Stephen D
  full_name: Bongiorno, Stephen D
  last_name: Bongiorno
- first_name: Raffaella
  full_name: Bonino, Raffaella
  last_name: Bonino
- first_name: Alessandro
  full_name: Brez, Alessandro
  last_name: Brez
- first_name: Niccolò
  full_name: Bucciantini, Niccolò
  last_name: Bucciantini
- first_name: Fiamma
  full_name: Capitanio, Fiamma
  last_name: Capitanio
- first_name: Simone
  full_name: Castellano, Simone
  last_name: Castellano
- first_name: Elisabetta
  full_name: Cavazzuti, Elisabetta
  last_name: Cavazzuti
- first_name: Chien-Ting
  full_name: Chen, Chien-Ting
  last_name: Chen
- first_name: Stefano
  full_name: Ciprini, Stefano
  last_name: Ciprini
- first_name: Enrico
  full_name: Costa, Enrico
  last_name: Costa
- first_name: Alessandra
  full_name: De Rosa, Alessandra
  last_name: De Rosa
- first_name: Ettore
  full_name: Del Monte, Ettore
  last_name: Del Monte
- first_name: Laura
  full_name: Di Gesu, Laura
  last_name: Di Gesu
- first_name: Niccolò
  full_name: Di Lalla, Niccolò
  last_name: Di Lalla
- first_name: Alessandro
  full_name: Di Marco, Alessandro
  last_name: Di Marco
- first_name: Immacolata
  full_name: Donnarumma, Immacolata
  last_name: Donnarumma
- first_name: Victor
  full_name: Doroshenko, Victor
  last_name: Doroshenko
- first_name: Michal
  full_name: Dovčiak, Michal
  last_name: Dovčiak
- first_name: Teruaki
  full_name: Enoto, Teruaki
  last_name: Enoto
- first_name: Yuri
  full_name: Evangelista, Yuri
  last_name: Evangelista
- first_name: Sergio
  full_name: Fabiani, Sergio
  last_name: Fabiani
- first_name: Riccardo
  full_name: Ferrazzoli, Riccardo
  last_name: Ferrazzoli
- first_name: Javier A
  full_name: Garcia, Javier A
  last_name: Garcia
- first_name: Shuichi
  full_name: Gunji, Shuichi
  last_name: Gunji
- first_name: Kiyoshi
  full_name: Hayashida, Kiyoshi
  last_name: Hayashida
- first_name: Wataru
  full_name: Iwakiri, Wataru
  last_name: Iwakiri
- first_name: Svetlana G
  full_name: Jorstad, Svetlana G
  last_name: Jorstad
- first_name: Philip
  full_name: Kaaret, Philip
  last_name: Kaaret
- first_name: Vladimir
  full_name: Karas, Vladimir
  last_name: Karas
- first_name: Fabian
  full_name: Kislat, Fabian
  last_name: Kislat
- first_name: Takao
  full_name: Kitaguchi, Takao
  last_name: Kitaguchi
- first_name: Jeffery J
  full_name: Kolodziejczak, Jeffery J
  last_name: Kolodziejczak
- first_name: Henric
  full_name: Krawczynski, Henric
  last_name: Krawczynski
- first_name: Fabio La
  full_name: Monaca, Fabio La
  last_name: Monaca
- first_name: Luca
  full_name: Latronico, Luca
  last_name: Latronico
- first_name: Ioannis
  full_name: Liodakis, Ioannis
  last_name: Liodakis
- first_name: Simone
  full_name: Maldera, Simone
  last_name: Maldera
- first_name: Alberto
  full_name: Manfreda, Alberto
  last_name: Manfreda
- first_name: Frédéric
  full_name: Marin, Frédéric
  last_name: Marin
- first_name: Andrea
  full_name: Marinucci, Andrea
  last_name: Marinucci
- first_name: Alan P
  full_name: Marscher, Alan P
  last_name: Marscher
- first_name: Herman L
  full_name: Marshall, Herman L
  last_name: Marshall
- first_name: Francesco
  full_name: Massaro, Francesco
  last_name: Massaro
- first_name: Giorgio
  full_name: Matt, Giorgio
  last_name: Matt
- first_name: Ikuyuki
  full_name: Mitsuishi, Ikuyuki
  last_name: Mitsuishi
- first_name: Tsunefumi
  full_name: Mizuno, Tsunefumi
  last_name: Mizuno
- first_name: Fabio
  full_name: Muleri, Fabio
  last_name: Muleri
- first_name: C-Y
  full_name: Ng, C-Y
  last_name: Ng
- first_name: Stephen L
  full_name: O’Dell, Stephen L
  last_name: O’Dell
- first_name: Nicola
  full_name: Omodei, Nicola
  last_name: Omodei
- first_name: Chiara
  full_name: Oppedisano, Chiara
  last_name: Oppedisano
- first_name: Alessandro
  full_name: Papitto, Alessandro
  last_name: Papitto
- first_name: George G
  full_name: Pavlov, George G
  last_name: Pavlov
- first_name: Abel Lawrence
  full_name: Peirson, Abel Lawrence
  last_name: Peirson
- first_name: Matteo
  full_name: Perri, Matteo
  last_name: Perri
- first_name: Melissa
  full_name: Pesce-Rollins, Melissa
  last_name: Pesce-Rollins
- first_name: Pierre-Olivier
  full_name: Petrucci, Pierre-Olivier
  last_name: Petrucci
- first_name: Maura
  full_name: Pilia, Maura
  last_name: Pilia
- first_name: Andrea
  full_name: Possenti, Andrea
  last_name: Possenti
- first_name: Juri
  full_name: Poutanen, Juri
  last_name: Poutanen
- first_name: Simonetta
  full_name: Puccetti, Simonetta
  last_name: Puccetti
- first_name: Brian D
  full_name: Ramsey, Brian D
  last_name: Ramsey
- first_name: John
  full_name: Rankin, John
  last_name: Rankin
- first_name: Ajay
  full_name: Ratheesh, Ajay
  last_name: Ratheesh
- first_name: Oliver J
  full_name: Roberts, Oliver J
  last_name: Roberts
- first_name: Roger W
  full_name: Romani, Roger W
  last_name: Romani
- first_name: Carmelo
  full_name: Sgrò, Carmelo
  last_name: Sgrò
- first_name: Patrick
  full_name: Slane, Patrick
  last_name: Slane
- first_name: Paolo
  full_name: Soffitta, Paolo
  last_name: Soffitta
- first_name: Gloria
  full_name: Spandre, Gloria
  last_name: Spandre
- first_name: Douglas A
  full_name: Swartz, Douglas A
  last_name: Swartz
- first_name: Toru
  full_name: Tamagawa, Toru
  last_name: Tamagawa
- first_name: Fabrizio
  full_name: Tavecchio, Fabrizio
  last_name: Tavecchio
- first_name: Yuzuru
  full_name: Tawara, Yuzuru
  last_name: Tawara
- first_name: Allyn F
  full_name: Tennant, Allyn F
  last_name: Tennant
- first_name: Nicholas E
  full_name: Thomas, Nicholas E
  last_name: Thomas
- first_name: Francesco
  full_name: Tombesi, Francesco
  last_name: Tombesi
- first_name: Alessio
  full_name: Trois, Alessio
  last_name: Trois
- first_name: Sergey S
  full_name: Tsygankov, Sergey S
  last_name: Tsygankov
- first_name: Jacco
  full_name: Vink, Jacco
  last_name: Vink
- first_name: Martin C
  full_name: Weisskopf, Martin C
  last_name: Weisskopf
- first_name: Kinwah
  full_name: Wu, Kinwah
  last_name: Wu
- first_name: Fei
  full_name: Xie, Fei
  last_name: Xie
citation:
  ama: Heyl J, Taverna R, Turolla R, et al. The detection of polarized X-ray emission
    from the magnetar 1E 2259+586. <i>Monthly Notices of the Royal Astronomical Society</i>.
    2023;527(4):12219-12231. doi:<a href="https://doi.org/10.1093/mnras/stad3680">10.1093/mnras/stad3680</a>
  apa: Heyl, J., Taverna, R., Turolla, R., Israel, G. L., Ng, M., Kırmızıbayrak, D.,
    … Xie, F. (2023). The detection of polarized X-ray emission from the magnetar
    1E 2259+586. <i>Monthly Notices of the Royal Astronomical Society</i>. Oxford
    University Press. <a href="https://doi.org/10.1093/mnras/stad3680">https://doi.org/10.1093/mnras/stad3680</a>
  chicago: Heyl, Jeremy, Roberto Taverna, Roberto Turolla, Gian Luca Israel, Mason
    Ng, Demet Kırmızıbayrak, Denis González-Caniulef, et al. “The Detection of Polarized
    X-Ray Emission from the Magnetar 1E 2259+586.” <i>Monthly Notices of the Royal
    Astronomical Society</i>. Oxford University Press, 2023. <a href="https://doi.org/10.1093/mnras/stad3680">https://doi.org/10.1093/mnras/stad3680</a>.
  ieee: J. Heyl <i>et al.</i>, “The detection of polarized X-ray emission from the
    magnetar 1E 2259+586,” <i>Monthly Notices of the Royal Astronomical Society</i>,
    vol. 527, no. 4. Oxford University Press, pp. 12219–12231, 2023.
  ista: Heyl J et al. 2023. The detection of polarized X-ray emission from the magnetar
    1E 2259+586. Monthly Notices of the Royal Astronomical Society. 527(4), 12219–12231.
  mla: Heyl, Jeremy, et al. “The Detection of Polarized X-Ray Emission from the Magnetar
    1E 2259+586.” <i>Monthly Notices of the Royal Astronomical Society</i>, vol. 527,
    no. 4, Oxford University Press, 2023, pp. 12219–31, doi:<a href="https://doi.org/10.1093/mnras/stad3680">10.1093/mnras/stad3680</a>.
  short: J. Heyl, R. Taverna, R. Turolla, G.L. Israel, M. Ng, D. Kırmızıbayrak, D.
    González-Caniulef, I. Caiazzo, S. Zane, S.R. Ehlert, M. Negro, I. Agudo, L.A.
    Antonelli, M. Bachetti, L. Baldini, W.H. Baumgartner, R. Bellazzini, S. Bianchi,
    S.D. Bongiorno, R. Bonino, A. Brez, N. Bucciantini, F. Capitanio, S. Castellano,
    E. Cavazzuti, C.-T. Chen, S. Ciprini, E. Costa, A. De Rosa, E. Del Monte, L. Di
    Gesu, N. Di Lalla, A. Di Marco, I. Donnarumma, V. Doroshenko, M. Dovčiak, T. Enoto,
    Y. Evangelista, S. Fabiani, R. Ferrazzoli, J.A. Garcia, S. Gunji, K. Hayashida,
    W. Iwakiri, S.G. Jorstad, P. Kaaret, V. Karas, F. Kislat, T. Kitaguchi, J.J. Kolodziejczak,
    H. Krawczynski, F.L. Monaca, L. Latronico, I. Liodakis, S. Maldera, A. Manfreda,
    F. Marin, A. Marinucci, A.P. Marscher, H.L. Marshall, F. Massaro, G. Matt, I.
    Mitsuishi, T. Mizuno, F. Muleri, C.-Y. Ng, S.L. O’Dell, N. Omodei, C. Oppedisano,
    A. Papitto, G.G. Pavlov, A.L. Peirson, M. Perri, M. Pesce-Rollins, P.-O. Petrucci,
    M. Pilia, A. Possenti, J. Poutanen, S. Puccetti, B.D. Ramsey, J. Rankin, A. Ratheesh,
    O.J. Roberts, R.W. Romani, C. Sgrò, P. Slane, P. Soffitta, G. Spandre, D.A. Swartz,
    T. Tamagawa, F. Tavecchio, Y. Tawara, A.F. Tennant, N.E. Thomas, F. Tombesi, A.
    Trois, S.S. Tsygankov, J. Vink, M.C. Weisskopf, K. Wu, F. Xie, Monthly Notices
    of the Royal Astronomical Society 527 (2023) 12219–12231.
date_created: 2024-03-26T09:44:24Z
date_published: 2023-12-01T00:00:00Z
date_updated: 2024-04-02T06:51:04Z
day: '01'
doi: 10.1093/mnras/stad3680
extern: '1'
external_id:
  arxiv:
  - '2311.03637'
intvolume: '       527'
issue: '4'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1093/mnras/stad3680
month: '12'
oa: 1
oa_version: Published Version
page: 12219-12231
publication: Monthly Notices of the Royal Astronomical Society
publication_identifier:
  eissn:
  - 1365-2966
  issn:
  - 0035-8711
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: The detection of polarized X-ray emission from the magnetar 1E 2259+586
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 527
year: '2023'
...
---
_id: '15192'
abstract:
- lang: eng
  text: We searched the Gaia DR3 database for ultramassive white dwarfs with kinematics
    consistent with having escaped the nearby Hyades open cluster, identifying three
    such candidates. Two of these candidates have masses estimated from Gaia photometry
    of approximately 1.1 solar masses; their status as products of single-stellar
    evolution that have escaped the cluster was deemed too questionable for immediate
    follow-up analysis. The remaining candidate has an expected mass >1.3 solar masses,
    significantly reducing the probability of it being an interloper. Analysis of
    follow-up Gemini GMOS spectroscopy for this source reveals a nonmagnetized hydrogen
    atmosphere white dwarf with a mass and age consistent with having formed from
    a single star. Assuming a single-stellar-evolution formation channel, we estimate
    a 97.8% chance that the candidate is a true escapee from the Hyades. With a determined
    mass of 1.317 solar masses, this is potentially the most massive known single-evolution
    white dwarf and is by far the most massive with a strong association with an open
    cluster.
article_number: L41
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: David R.
  full_name: Miller, David R.
  last_name: Miller
- first_name: Ilaria
  full_name: Caiazzo, Ilaria
  id: 8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d
  last_name: Caiazzo
  orcid: 0000-0002-4770-5388
- first_name: Jeremy
  full_name: Heyl, Jeremy
  last_name: Heyl
- first_name: Harvey B.
  full_name: Richer, Harvey B.
  last_name: Richer
- first_name: Kareem
  full_name: El-Badry, Kareem
  last_name: El-Badry
- first_name: Antonio C.
  full_name: Rodriguez, Antonio C.
  last_name: Rodriguez
- first_name: Zachary P.
  full_name: Vanderbosch, Zachary P.
  last_name: Vanderbosch
- first_name: Jan
  full_name: van Roestel, Jan
  last_name: van Roestel
citation:
  ama: Miller DR, Caiazzo I, Heyl J, et al. An extremely massive white dwarf escaped
    from the Hyades star cluster. <i>The Astrophysical Journal Letters</i>. 2023;956(2).
    doi:<a href="https://doi.org/10.3847/2041-8213/acffc4">10.3847/2041-8213/acffc4</a>
  apa: Miller, D. R., Caiazzo, I., Heyl, J., Richer, H. B., El-Badry, K., Rodriguez,
    A. C., … van Roestel, J. (2023). An extremely massive white dwarf escaped from
    the Hyades star cluster. <i>The Astrophysical Journal Letters</i>. American Astronomical
    Society. <a href="https://doi.org/10.3847/2041-8213/acffc4">https://doi.org/10.3847/2041-8213/acffc4</a>
  chicago: Miller, David R., Ilaria Caiazzo, Jeremy Heyl, Harvey B. Richer, Kareem
    El-Badry, Antonio C. Rodriguez, Zachary P. Vanderbosch, and Jan van Roestel. “An
    Extremely Massive White Dwarf Escaped from the Hyades Star Cluster.” <i>The Astrophysical
    Journal Letters</i>. American Astronomical Society, 2023. <a href="https://doi.org/10.3847/2041-8213/acffc4">https://doi.org/10.3847/2041-8213/acffc4</a>.
  ieee: D. R. Miller <i>et al.</i>, “An extremely massive white dwarf escaped from
    the Hyades star cluster,” <i>The Astrophysical Journal Letters</i>, vol. 956,
    no. 2. American Astronomical Society, 2023.
  ista: Miller DR, Caiazzo I, Heyl J, Richer HB, El-Badry K, Rodriguez AC, Vanderbosch
    ZP, van Roestel J. 2023. An extremely massive white dwarf escaped from the Hyades
    star cluster. The Astrophysical Journal Letters. 956(2), L41.
  mla: Miller, David R., et al. “An Extremely Massive White Dwarf Escaped from the
    Hyades Star Cluster.” <i>The Astrophysical Journal Letters</i>, vol. 956, no.
    2, L41, American Astronomical Society, 2023, doi:<a href="https://doi.org/10.3847/2041-8213/acffc4">10.3847/2041-8213/acffc4</a>.
  short: D.R. Miller, I. Caiazzo, J. Heyl, H.B. Richer, K. El-Badry, A.C. Rodriguez,
    Z.P. Vanderbosch, J. van Roestel, The Astrophysical Journal Letters 956 (2023).
date_created: 2024-03-26T09:45:38Z
date_published: 2023-10-19T00:00:00Z
date_updated: 2024-04-02T06:56:01Z
day: '19'
doi: 10.3847/2041-8213/acffc4
extern: '1'
external_id:
  arxiv:
  - '2310.03204'
intvolume: '       956'
issue: '2'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.3847/2041-8213/acffc4
month: '10'
oa: 1
oa_version: Published Version
publication: The Astrophysical Journal Letters
publication_identifier:
  eissn:
  - 2041-8213
  issn:
  - 2041-8205
publication_status: published
publisher: American Astronomical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: An extremely massive white dwarf escaped from the Hyades star cluster
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 956
year: '2023'
...
---
_id: '15193'
abstract:
- lang: eng
  text: We report on Imaging X-ray polarimetry explorer (IXPE) observations of the
    Be-transient X-ray pulsar LS V +44 17/RX J0440.9+4431 made at two luminosity levels
    during the giant outburst in January–February 2023. Considering the observed spectral
    variability and changes in the pulse profiles, the source was likely caught in
    supercritical and subcritical states with significantly different emission-region
    geometry, associated with the presence of accretion columns and hot spots, respectively.
    We focus here on the pulse-phase-resolved polarimetric analysis and find that
    the observed dependencies of the polarization degree and polarization angle (PA)
    on the pulse phase are indeed drastically different for the two observations.
    The observed differences, if interpreted within the framework of the rotating
    vector model (RVM), imply dramatic variations in the spin axis inclination, the
    position angle, and the magnetic colatitude by tens of degrees within the space
    of just a few days. We suggest that the apparent changes in the observed PA phase
    dependence are predominantly related to the presence of an unpulsed polarized
    component in addition to the polarized radiation associated with the pulsar itself.
    We then show that the observed PA phase dependence in both observations can be
    explained with a single set of RVM parameters defining the pulsar’s geometry.
    We also suggest that the additional polarized component is likely produced by
    scattering of the pulsar radiation in the equatorial disk wind.
article_number: A57
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Victor
  full_name: Doroshenko, Victor
  last_name: Doroshenko
- first_name: Juri
  full_name: Poutanen, Juri
  last_name: Poutanen
- first_name: Jeremy
  full_name: Heyl, Jeremy
  last_name: Heyl
- first_name: Sergey S.
  full_name: Tsygankov, Sergey S.
  last_name: Tsygankov
- first_name: Ilaria
  full_name: Caiazzo, Ilaria
  id: 8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d
  last_name: Caiazzo
  orcid: 0000-0002-4770-5388
- first_name: Roberto
  full_name: Turolla, Roberto
  last_name: Turolla
- first_name: Alexandra
  full_name: Veledina, Alexandra
  last_name: Veledina
- first_name: Martin C.
  full_name: Weisskopf, Martin C.
  last_name: Weisskopf
- first_name: Sofia V.
  full_name: Forsblom, Sofia V.
  last_name: Forsblom
- first_name: Denis
  full_name: González-Caniulef, Denis
  last_name: González-Caniulef
- first_name: Vladislav
  full_name: Loktev, Vladislav
  last_name: Loktev
- first_name: Christian
  full_name: Malacaria, Christian
  last_name: Malacaria
- first_name: Alexander A.
  full_name: Mushtukov, Alexander A.
  last_name: Mushtukov
- first_name: Valery F.
  full_name: Suleimanov, Valery F.
  last_name: Suleimanov
- first_name: Alexander A.
  full_name: Lutovinov, Alexander A.
  last_name: Lutovinov
- first_name: Ilya A.
  full_name: Mereminskiy, Ilya A.
  last_name: Mereminskiy
- first_name: Sergey V.
  full_name: Molkov, Sergey V.
  last_name: Molkov
- first_name: Alexander
  full_name: Salganik, Alexander
  last_name: Salganik
- first_name: Andrea
  full_name: Santangelo, Andrea
  last_name: Santangelo
- first_name: Andrei V.
  full_name: Berdyugin, Andrei V.
  last_name: Berdyugin
- first_name: Vadim
  full_name: Kravtsov, Vadim
  last_name: Kravtsov
- first_name: Anagha P.
  full_name: Nitindala, Anagha P.
  last_name: Nitindala
- first_name: Iván
  full_name: Agudo, Iván
  last_name: Agudo
- first_name: Lucio A.
  full_name: Antonelli, Lucio A.
  last_name: Antonelli
- first_name: Matteo
  full_name: Bachetti, Matteo
  last_name: Bachetti
- first_name: Luca
  full_name: Baldini, Luca
  last_name: Baldini
- first_name: Wayne H.
  full_name: Baumgartner, Wayne H.
  last_name: Baumgartner
- first_name: Ronaldo
  full_name: Bellazzini, Ronaldo
  last_name: Bellazzini
- first_name: Stefano
  full_name: Bianchi, Stefano
  last_name: Bianchi
- first_name: Stephen D.
  full_name: Bongiorno, Stephen D.
  last_name: Bongiorno
- first_name: Raffaella
  full_name: Bonino, Raffaella
  last_name: Bonino
- first_name: Alessandro
  full_name: Brez, Alessandro
  last_name: Brez
- first_name: Niccolò
  full_name: Bucciantini, Niccolò
  last_name: Bucciantini
- first_name: Fiamma
  full_name: Capitanio, Fiamma
  last_name: Capitanio
- first_name: Simone
  full_name: Castellano, Simone
  last_name: Castellano
- first_name: Elisabetta
  full_name: Cavazzuti, Elisabetta
  last_name: Cavazzuti
- first_name: Chien-Ting
  full_name: Chen, Chien-Ting
  last_name: Chen
- first_name: Stefano
  full_name: Ciprini, Stefano
  last_name: Ciprini
- first_name: Enrico
  full_name: Costa, Enrico
  last_name: Costa
- first_name: Alessandra
  full_name: De Rosa, Alessandra
  last_name: De Rosa
- first_name: Ettore
  full_name: Del Monte, Ettore
  last_name: Del Monte
- first_name: Laura
  full_name: Di Gesu, Laura
  last_name: Di Gesu
- first_name: Niccolò
  full_name: Di Lalla, Niccolò
  last_name: Di Lalla
- first_name: Alessandro
  full_name: Di Marco, Alessandro
  last_name: Di Marco
- first_name: Immacolata
  full_name: Donnarumma, Immacolata
  last_name: Donnarumma
- first_name: Michal
  full_name: Dovčiak, Michal
  last_name: Dovčiak
- first_name: Steven R.
  full_name: Ehlert, Steven R.
  last_name: Ehlert
- first_name: Teruaki
  full_name: Enoto, Teruaki
  last_name: Enoto
- first_name: Yuri
  full_name: Evangelista, Yuri
  last_name: Evangelista
- first_name: Sergio
  full_name: Fabiani, Sergio
  last_name: Fabiani
- first_name: Riccardo
  full_name: Ferrazzoli, Riccardo
  last_name: Ferrazzoli
- first_name: Javier A.
  full_name: García, Javier A.
  last_name: García
- first_name: Shuichi
  full_name: Gunji, Shuichi
  last_name: Gunji
- first_name: Kiyoshi
  full_name: Hayashida, Kiyoshi
  last_name: Hayashida
- first_name: Wataru
  full_name: Iwakiri, Wataru
  last_name: Iwakiri
- first_name: Svetlana G.
  full_name: Jorstad, Svetlana G.
  last_name: Jorstad
- first_name: Philip
  full_name: Kaaret, Philip
  last_name: Kaaret
- first_name: Vladimir
  full_name: Karas, Vladimir
  last_name: Karas
- first_name: Fabian
  full_name: Kislat, Fabian
  last_name: Kislat
- first_name: Takao
  full_name: Kitaguchi, Takao
  last_name: Kitaguchi
- first_name: Jeffery J.
  full_name: Kolodziejczak, Jeffery J.
  last_name: Kolodziejczak
- first_name: Henric
  full_name: Krawczynski, Henric
  last_name: Krawczynski
- first_name: Fabio
  full_name: La Monaca, Fabio
  last_name: La Monaca
- first_name: Luca
  full_name: Latronico, Luca
  last_name: Latronico
- first_name: Ioannis
  full_name: Liodakis, Ioannis
  last_name: Liodakis
- first_name: Simone
  full_name: Maldera, Simone
  last_name: Maldera
- first_name: Alberto
  full_name: Manfreda, Alberto
  last_name: Manfreda
- first_name: Frédéric
  full_name: Marin, Frédéric
  last_name: Marin
- first_name: Andrea
  full_name: Marinucci, Andrea
  last_name: Marinucci
- first_name: Alan P.
  full_name: Marscher, Alan P.
  last_name: Marscher
- first_name: Herman L.
  full_name: Marshall, Herman L.
  last_name: Marshall
- first_name: Francesco
  full_name: Massaro, Francesco
  last_name: Massaro
- first_name: Giorgio
  full_name: Matt, Giorgio
  last_name: Matt
- first_name: Ikuyuki
  full_name: Mitsuishi, Ikuyuki
  last_name: Mitsuishi
- first_name: Tsunefumi
  full_name: Mizuno, Tsunefumi
  last_name: Mizuno
- first_name: Fabio
  full_name: Muleri, Fabio
  last_name: Muleri
- first_name: Michela
  full_name: Negro, Michela
  last_name: Negro
- first_name: Chi-Yung
  full_name: Ng, Chi-Yung
  last_name: Ng
- first_name: Stephen L.
  full_name: O’Dell, Stephen L.
  last_name: O’Dell
- first_name: Nicola
  full_name: Omodei, Nicola
  last_name: Omodei
- first_name: Chiara
  full_name: Oppedisano, Chiara
  last_name: Oppedisano
- first_name: Alessandro
  full_name: Papitto, Alessandro
  last_name: Papitto
- first_name: George G.
  full_name: Pavlov, George G.
  last_name: Pavlov
- first_name: Abel L.
  full_name: Peirson, Abel L.
  last_name: Peirson
- first_name: Matteo
  full_name: Perri, Matteo
  last_name: Perri
- first_name: Melissa
  full_name: Pesce-Rollins, Melissa
  last_name: Pesce-Rollins
- first_name: Pierre-Olivier
  full_name: Petrucci, Pierre-Olivier
  last_name: Petrucci
- first_name: Maura
  full_name: Pilia, Maura
  last_name: Pilia
- first_name: Andrea
  full_name: Possenti, Andrea
  last_name: Possenti
- first_name: Simonetta
  full_name: Puccetti, Simonetta
  last_name: Puccetti
- first_name: Brian D.
  full_name: Ramsey, Brian D.
  last_name: Ramsey
- first_name: John
  full_name: Rankin, John
  last_name: Rankin
- first_name: Ajay
  full_name: Ratheesh, Ajay
  last_name: Ratheesh
- first_name: Oliver J.
  full_name: Roberts, Oliver J.
  last_name: Roberts
- first_name: Roger W.
  full_name: Romani, Roger W.
  last_name: Romani
- first_name: Carmelo
  full_name: Sgrò, Carmelo
  last_name: Sgrò
- first_name: Patrick
  full_name: Slane, Patrick
  last_name: Slane
- first_name: Paolo
  full_name: Soffitta, Paolo
  last_name: Soffitta
- first_name: Gloria
  full_name: Spandre, Gloria
  last_name: Spandre
- first_name: Douglas A.
  full_name: Swartz, Douglas A.
  last_name: Swartz
- first_name: Toru
  full_name: Tamagawa, Toru
  last_name: Tamagawa
- first_name: Fabrizio
  full_name: Tavecchio, Fabrizio
  last_name: Tavecchio
- first_name: Roberto
  full_name: Taverna, Roberto
  last_name: Taverna
- first_name: Yuzuru
  full_name: Tawara, Yuzuru
  last_name: Tawara
- first_name: Allyn F.
  full_name: Tennant, Allyn F.
  last_name: Tennant
- first_name: Nicholas E.
  full_name: Thomas, Nicholas E.
  last_name: Thomas
- first_name: Francesco
  full_name: Tombesi, Francesco
  last_name: Tombesi
- first_name: Alessio
  full_name: Trois, Alessio
  last_name: Trois
- first_name: Jacco
  full_name: Vink, Jacco
  last_name: Vink
- first_name: Kinwah
  full_name: Wu, Kinwah
  last_name: Wu
- first_name: Fei
  full_name: Xie, Fei
  last_name: Xie
- first_name: Silvia
  full_name: Zane, Silvia
  last_name: Zane
citation:
  ama: Doroshenko V, Poutanen J, Heyl J, et al. Complex variations in X-ray polarization
    in the X-ray pulsar LS V +44 17/RX J0440.9+4431. <i>Astronomy &#38; Astrophysics</i>.
    2023;677. doi:<a href="https://doi.org/10.1051/0004-6361/202347088">10.1051/0004-6361/202347088</a>
  apa: Doroshenko, V., Poutanen, J., Heyl, J., Tsygankov, S. S., Caiazzo, I., Turolla,
    R., … Zane, S. (2023). Complex variations in X-ray polarization in the X-ray pulsar
    LS V +44 17/RX J0440.9+4431. <i>Astronomy &#38; Astrophysics</i>. EDP Sciences.
    <a href="https://doi.org/10.1051/0004-6361/202347088">https://doi.org/10.1051/0004-6361/202347088</a>
  chicago: Doroshenko, Victor, Juri Poutanen, Jeremy Heyl, Sergey S. Tsygankov, Ilaria
    Caiazzo, Roberto Turolla, Alexandra Veledina, et al. “Complex Variations in X-Ray
    Polarization in the X-Ray Pulsar LS V +44 17/RX J0440.9+4431.” <i>Astronomy &#38;
    Astrophysics</i>. EDP Sciences, 2023. <a href="https://doi.org/10.1051/0004-6361/202347088">https://doi.org/10.1051/0004-6361/202347088</a>.
  ieee: V. Doroshenko <i>et al.</i>, “Complex variations in X-ray polarization in
    the X-ray pulsar LS V +44 17/RX J0440.9+4431,” <i>Astronomy &#38; Astrophysics</i>,
    vol. 677. EDP Sciences, 2023.
  ista: Doroshenko V et al. 2023. Complex variations in X-ray polarization in the
    X-ray pulsar LS V +44 17/RX J0440.9+4431. Astronomy &#38; Astrophysics. 677, A57.
  mla: Doroshenko, Victor, et al. “Complex Variations in X-Ray Polarization in the
    X-Ray Pulsar LS V +44 17/RX J0440.9+4431.” <i>Astronomy &#38; Astrophysics</i>,
    vol. 677, A57, EDP Sciences, 2023, doi:<a href="https://doi.org/10.1051/0004-6361/202347088">10.1051/0004-6361/202347088</a>.
  short: V. Doroshenko, J. Poutanen, J. Heyl, S.S. Tsygankov, I. Caiazzo, R. Turolla,
    A. Veledina, M.C. Weisskopf, S.V. Forsblom, D. González-Caniulef, V. Loktev, C.
    Malacaria, A.A. Mushtukov, V.F. Suleimanov, A.A. Lutovinov, I.A. Mereminskiy,
    S.V. Molkov, A. Salganik, A. Santangelo, A.V. Berdyugin, V. Kravtsov, A.P. Nitindala,
    I. Agudo, L.A. Antonelli, M. Bachetti, L. Baldini, W.H. Baumgartner, R. Bellazzini,
    S. Bianchi, S.D. Bongiorno, R. Bonino, A. Brez, N. Bucciantini, F. Capitanio,
    S. Castellano, E. Cavazzuti, C.-T. Chen, S. Ciprini, E. Costa, A. De Rosa, E.
    Del Monte, L. Di Gesu, N. Di Lalla, A. Di Marco, I. Donnarumma, M. Dovčiak, S.R.
    Ehlert, T. Enoto, Y. Evangelista, S. Fabiani, R. Ferrazzoli, J.A. García, S. Gunji,
    K. Hayashida, W. Iwakiri, S.G. Jorstad, P. Kaaret, V. Karas, F. Kislat, T. Kitaguchi,
    J.J. Kolodziejczak, H. Krawczynski, F. La Monaca, L. Latronico, I. Liodakis, S.
    Maldera, A. Manfreda, F. Marin, A. Marinucci, A.P. Marscher, H.L. Marshall, F.
    Massaro, G. Matt, I. Mitsuishi, T. Mizuno, F. Muleri, M. Negro, C.-Y. Ng, S.L.
    O’Dell, N. Omodei, C. Oppedisano, A. Papitto, G.G. Pavlov, A.L. Peirson, M. Perri,
    M. Pesce-Rollins, P.-O. Petrucci, M. Pilia, A. Possenti, S. Puccetti, B.D. Ramsey,
    J. Rankin, A. Ratheesh, O.J. Roberts, R.W. Romani, C. Sgrò, P. Slane, P. Soffitta,
    G. Spandre, D.A. Swartz, T. Tamagawa, F. Tavecchio, R. Taverna, Y. Tawara, A.F.
    Tennant, N.E. Thomas, F. Tombesi, A. Trois, J. Vink, K. Wu, F. Xie, S. Zane, Astronomy
    &#38; Astrophysics 677 (2023).
date_created: 2024-03-26T09:46:01Z
date_published: 2023-09-04T00:00:00Z
date_updated: 2024-04-02T06:57:11Z
day: '04'
doi: 10.1051/0004-6361/202347088
extern: '1'
external_id:
  arxiv:
  - '2306.02116'
intvolume: '       677'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1051/0004-6361/202347088
month: '09'
oa: 1
oa_version: Published Version
publication: Astronomy & Astrophysics
publication_identifier:
  eissn:
  - 1432-0746
  issn:
  - 0004-6361
publication_status: published
publisher: EDP Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: Complex variations in X-ray polarization in the X-ray pulsar LS V +44 17/RX
  J0440.9+4431
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 677
year: '2023'
...
---
_id: '15194'
abstract:
- lang: eng
  text: "AM Canum Venaticorum (AM CVn) systems are ultracompact binaries where a white
    dwarf accretes from a helium-rich degenerate or semidegenerate donor. Some AM
    CVn systems will be among the loudest sources of gravitational waves for the upcoming
    Laser Interferometer Space Antenna; yet the formation channel of AM CVns remains
    uncertain. We report the study and characterization of a new eclipsing AM CVn,
    SRGeJ045359.9+622444 (hereafter, SRGeJ0453), discovered from a joint Spektrum-Roentgen-Gamma
    (SRG) Extended Roentgen Survey with an Imaging Telescope Array (eROSITA) mission
    and Zwicky Transient Facility program to identify cataclysmic variables (CVs).
    We obtained optical photometry to confirm the eclipse of SRGeJ0453 and determine
    the orbital period to be \r\n. We constrain the binary parameters by modeling
    the high-speed photometry and radial-velocity curves and find Mdonor = 0.044 ±
    0.024M⊙ and Rdonor = 0.078 ± 0.012R⊙. The X-ray spectrum is approximated by a
    power-law model with an unusually flat photon index of Γ ∼ 1 previously seen in
    magnetic CVs with SRG/eROSITA, but verifying that the magnetic nature of SRGeJ0453
    requires further investigation. Optical spectroscopy suggests that the donor star
    of SRGeJ0453 could have initially been a He star or a He white dwarf. SRGeJ0453
    is the ninth eclipsing AM CVn system published to date, and its lack of optical
    outbursts have made it elusive in previous surveys. The discovery of SRGeJ0453
    using joint X-ray and optical surveys highlights the potential for discovering
    similar systems in the near future."
article_number: '63'
article_processing_charge: No
article_type: original
author:
- first_name: Antonio C.
  full_name: Rodriguez, Antonio C.
  last_name: Rodriguez
- first_name: Ilkham
  full_name: Galiullin, Ilkham
  last_name: Galiullin
- first_name: Marat
  full_name: Gilfanov, Marat
  last_name: Gilfanov
- first_name: Shrinivas R.
  full_name: Kulkarni, Shrinivas R.
  last_name: Kulkarni
- first_name: Irek
  full_name: Khamitov, Irek
  last_name: Khamitov
- first_name: Ilfan
  full_name: Bikmaev, Ilfan
  last_name: Bikmaev
- first_name: Jan
  full_name: van Roestel, Jan
  last_name: van Roestel
- first_name: Lev
  full_name: Yungelson, Lev
  last_name: Yungelson
- first_name: Kareem
  full_name: El-Badry, Kareem
  last_name: El-Badry
- first_name: Rashid
  full_name: Sunayev, Rashid
  last_name: Sunayev
- first_name: Thomas A.
  full_name: Prince, Thomas A.
  last_name: Prince
- first_name: Mikhail
  full_name: Buntov, Mikhail
  last_name: Buntov
- first_name: Ilaria
  full_name: Caiazzo, Ilaria
  id: 8ae5b6e7-2a03-11ee-914d-b58ed7a3b47d
  last_name: Caiazzo
  orcid: 0000-0002-4770-5388
- first_name: Andrew
  full_name: Drake, Andrew
  last_name: Drake
- first_name: Mark
  full_name: Gorbachev, Mark
  last_name: Gorbachev
- first_name: Matthew J.
  full_name: Graham, Matthew J.
  last_name: Graham
- first_name: Rustam
  full_name: Gumerov, Rustam
  last_name: Gumerov
- first_name: Eldar
  full_name: Irtuganov, Eldar
  last_name: Irtuganov
- first_name: Russ R.
  full_name: Laher, Russ R.
  last_name: Laher
- first_name: Frank J.
  full_name: Masci, Frank J.
  last_name: Masci
- first_name: Pavel
  full_name: Medvedev, Pavel
  last_name: Medvedev
- first_name: Josiah
  full_name: Purdum, Josiah
  last_name: Purdum
- first_name: Nail
  full_name: Sakhibullin, Nail
  last_name: Sakhibullin
- first_name: Alexander
  full_name: Sklyanov, Alexander
  last_name: Sklyanov
- first_name: Roger
  full_name: Smith, Roger
  last_name: Smith
- first_name: Paula
  full_name: Szkody, Paula
  last_name: Szkody
- first_name: Zachary P.
  full_name: Vanderbosch, Zachary P.
  last_name: Vanderbosch
citation:
  ama: 'Rodriguez AC, Galiullin I, Gilfanov M, et al. SRGeJ045359.9+622444: A 55 minute
    period eclipsing AM Canum Venaticorum star discovered from a joint SRG/eROSITA
    + ZTF search. <i>The Astrophysical Journal</i>. 2023;954(1). doi:<a href="https://doi.org/10.3847/1538-4357/ace698">10.3847/1538-4357/ace698</a>'
  apa: 'Rodriguez, A. C., Galiullin, I., Gilfanov, M., Kulkarni, S. R., Khamitov,
    I., Bikmaev, I., … Vanderbosch, Z. P. (2023). SRGeJ045359.9+622444: A 55 minute
    period eclipsing AM Canum Venaticorum star discovered from a joint SRG/eROSITA
    + ZTF search. <i>The Astrophysical Journal</i>. American Astronomical Society.
    <a href="https://doi.org/10.3847/1538-4357/ace698">https://doi.org/10.3847/1538-4357/ace698</a>'
  chicago: 'Rodriguez, Antonio C., Ilkham Galiullin, Marat Gilfanov, Shrinivas R.
    Kulkarni, Irek Khamitov, Ilfan Bikmaev, Jan van Roestel, et al. “SRGeJ045359.9+622444:
    A 55 Minute Period Eclipsing AM Canum Venaticorum Star Discovered from a Joint
    SRG/EROSITA + ZTF Search.” <i>The Astrophysical Journal</i>. American Astronomical
    Society, 2023. <a href="https://doi.org/10.3847/1538-4357/ace698">https://doi.org/10.3847/1538-4357/ace698</a>.'
  ieee: 'A. C. Rodriguez <i>et al.</i>, “SRGeJ045359.9+622444: A 55 minute period
    eclipsing AM Canum Venaticorum star discovered from a joint SRG/eROSITA + ZTF
    search,” <i>The Astrophysical Journal</i>, vol. 954, no. 1. American Astronomical
    Society, 2023.'
  ista: 'Rodriguez AC, Galiullin I, Gilfanov M, Kulkarni SR, Khamitov I, Bikmaev I,
    van Roestel J, Yungelson L, El-Badry K, Sunayev R, Prince TA, Buntov M, Caiazzo
    I, Drake A, Gorbachev M, Graham MJ, Gumerov R, Irtuganov E, Laher RR, Masci FJ,
    Medvedev P, Purdum J, Sakhibullin N, Sklyanov A, Smith R, Szkody P, Vanderbosch
    ZP. 2023. SRGeJ045359.9+622444: A 55 minute period eclipsing AM Canum Venaticorum
    star discovered from a joint SRG/eROSITA + ZTF search. The Astrophysical Journal.
    954(1), 63.'
  mla: 'Rodriguez, Antonio C., et al. “SRGeJ045359.9+622444: A 55 Minute Period Eclipsing
    AM Canum Venaticorum Star Discovered from a Joint SRG/EROSITA + ZTF Search.” <i>The
    Astrophysical Journal</i>, vol. 954, no. 1, 63, American Astronomical Society,
    2023, doi:<a href="https://doi.org/10.3847/1538-4357/ace698">10.3847/1538-4357/ace698</a>.'
  short: A.C. Rodriguez, I. Galiullin, M. Gilfanov, S.R. Kulkarni, I. Khamitov, I.
    Bikmaev, J. van Roestel, L. Yungelson, K. El-Badry, R. Sunayev, T.A. Prince, M.
    Buntov, I. Caiazzo, A. Drake, M. Gorbachev, M.J. Graham, R. Gumerov, E. Irtuganov,
    R.R. Laher, F.J. Masci, P. Medvedev, J. Purdum, N. Sakhibullin, A. Sklyanov, R.
    Smith, P. Szkody, Z.P. Vanderbosch, The Astrophysical Journal 954 (2023).
date_created: 2024-03-26T09:46:30Z
date_published: 2023-08-23T00:00:00Z
date_updated: 2024-04-02T06:58:03Z
day: '23'
doi: 10.3847/1538-4357/ace698
extern: '1'
intvolume: '       954'
issue: '1'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.3847/1538-4357/ace698
month: '08'
oa: 1
oa_version: Published Version
publication: The Astrophysical Journal
publication_identifier:
  eissn:
  - 1538-4357
  issn:
  - 0004-637X
publication_status: published
publisher: American Astronomical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'SRGeJ045359.9+622444: A 55 minute period eclipsing AM Canum Venaticorum star
  discovered from a joint SRG/eROSITA + ZTF search'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 954
year: '2023'
...
