---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '21484'
abstract:
- lang: eng
text: An individual's phenotype reflects a complex interplay of the direct effects
of their DNA, epigenetic modifications of their DNA induced by their parents,
and indirect effects of their parents' DNA. Here, we derive how the genetic variance
within a population is changed under the influence of indirect maternal, paternal
and parent-of-origin effects under random mating. We also consider indirect effects
of a sibling, in particular how the genetic variance is altered when looking at
the phenotypic difference between two siblings. The calculations are then extended
to include assortative mating (AM), which alters the variance by inducing increased
homozygosity and correlations within and across loci. AM likely leads to covariance
of parental genetic effects, a measure of the similarity of parents in the indirect
effects they have on their children. We propose that this assortment for parental
characteristics, where biological parents create similar environments for their
children, can create shared parental effects across traits and the appearance
of cross-trait AM. Our theory shows how the resemblance among relatives increases
under both AM, indirect and parent-of-origin effects. When our model is used to
predict correlations among relatives in human height, we find that explaining
the patterns observed in real data requires both indirect genetic effects and
assortative mating. The degree to which direct, indirect and epigenetic effects
shape the phenotypic variance of complex traits remains an open question that
requires large-scale family data to be resolved.
acknowledgement: We thank members of the Medical Genomics group at ISTA for their
comments, which improved this manuscript. This work was funded by an SNSF Eccellenza
Grant to MRR (PCEGP3-181181), and by core funding from the Institute of Science
and Technology Austria.
article_number: iyag042
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Ilse
full_name: Krätschmer, Ilse
id: 30d4014e-7753-11eb-b44b-db6d61112e73
last_name: Krätschmer
orcid: 0000-0002-5636-9259
- first_name: Matthew Richard
full_name: Robinson, Matthew Richard
id: E5D42276-F5DA-11E9-8E24-6303E6697425
last_name: Robinson
orcid: 0000-0001-8982-8813
citation:
ama: Krätschmer I, Robinson MR. A quantitative genetic model for indirect genetic
effects and genomic imprinting under random and assortative mating. Genetics.
2026. doi:10.1093/genetics/iyag042
apa: Krätschmer, I., & Robinson, M. R. (2026). A quantitative genetic model
for indirect genetic effects and genomic imprinting under random and assortative
mating. Genetics. Oxford University Press. https://doi.org/10.1093/genetics/iyag042
chicago: Krätschmer, Ilse, and Matthew Richard Robinson. “A Quantitative Genetic
Model for Indirect Genetic Effects and Genomic Imprinting under Random and Assortative
Mating.” Genetics. Oxford University Press, 2026. https://doi.org/10.1093/genetics/iyag042.
ieee: I. Krätschmer and M. R. Robinson, “A quantitative genetic model for indirect
genetic effects and genomic imprinting under random and assortative mating,” Genetics.
Oxford University Press, 2026.
ista: Krätschmer I, Robinson MR. 2026. A quantitative genetic model for indirect
genetic effects and genomic imprinting under random and assortative mating. Genetics.,
iyag042.
mla: Krätschmer, Ilse, and Matthew Richard Robinson. “A Quantitative Genetic Model
for Indirect Genetic Effects and Genomic Imprinting under Random and Assortative
Mating.” Genetics, iyag042, Oxford University Press, 2026, doi:10.1093/genetics/iyag042.
short: I. Krätschmer, M.R. Robinson, Genetics (2026).
corr_author: '1'
date_created: 2026-03-23T15:02:54Z
date_published: 2026-02-12T00:00:00Z
date_updated: 2026-06-18T08:31:14Z
day: '12'
ddc:
- '570'
department:
- _id: MaRo
doi: 10.1093/genetics/iyag042
external_id:
pmid:
- '41677404'
has_accepted_license: '1'
language:
- iso: eng
license: https://creativecommons.org/licenses/by/4.0/
main_file_link:
- open_access: '1'
url: https://doi.org/10.1093/genetics/iyag042
month: '02'
oa: 1
oa_version: Published Version
pmid: 1
publication: Genetics
publication_identifier:
issn:
- 1943-2631
publication_status: epub_ahead
publisher: Oxford University Press
quality_controlled: '1'
related_material:
link:
- relation: software
url: https://github.com/medical-genomics-group/familyMC
status: public
title: A quantitative genetic model for indirect genetic effects and genomic imprinting
under random and assortative mating
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2026'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '21502'
abstract:
- lang: eng
text: The mammalian brain stores glucose, the main circulating energy substrate,
as glycogen. In rodents, the cerebellum contains relatively high glycogen levels,
yet its cellular and subcellular distribution remains poorly defined. Using monoclonal
antibodies against glycogen, we examined its distribution in the mouse cerebellar
cortex. Glycogen was predominantly localized to Bergmann glia (BG) processes in
the molecular layer and was also detected in Purkinje cells (PCs), the principal
cerebellar neurons. To assess the functional significance of cerebellar glycogen,
we analyzed behavior in mice lacking glycogen synthase 1 (Gys1) in BG or PCs using
a floxed Gys1 line. Gys1 deficiency in either PCs or GFAP-positive cells reduced
anxiety-like behavior, whereas combined deletion caused PC degeneration and ataxia.
These findings reveal a critical role for glycogen metabolism in both astrocytes
and neurons in cerebellar function.
acknowledgement: This work was supported by the Novo Nordisk Foundation (NNFOC0058058,
H. Hirase), the Danmarks Frie Forskningsfond (0134-00107B and 5283-00069A, H.Hirase),
the Lundbeck Foundation, Japan Society for the Promotion of Science Grants-in-Aid
for Scientific Research (KAKENHI) program (22K06454/24H01221, A.K.; 23K27482, H.Hirai),
the Japan Agency for Medical Research and Development (AMED) Brain Mapping by Integrated
Neurotechnologies for Disease Studies (Brain/MINDS) (JP21dm0207111, H. Hirai), AMED
Brain/MINDS 2.0 (JP23wm0625001 and JP24wm0625103, H. Hirai), and grants from the
Spanish Ministerio de Ciencia e Innovación (MCIU/FEDER/AEI) (PID2020-118699 GB-100,
J.D.) and the Fundación Ramón Areces (J.D.). Sonam Akther has been supported by
the RIKEN IPA fellowship. We are thankful to Dr. Yuki Oe for his support in the
initial stage of this study and to Dan Xue for his help with the graphical abstract.
We thank Dr. Pia Weikop for providing CTN research infrastructure. The authors declare
no competing financial interests.
article_number: '115192'
article_processing_charge: Yes
article_type: original
author:
- first_name: Sonam
full_name: Akther, Sonam
last_name: Akther
- first_name: Ashley Bomin
full_name: Lee, Ashley Bomin
last_name: Lee
- first_name: Ayumu
full_name: Konno, Ayumu
last_name: Konno
- first_name: Antonis
full_name: Asiminas, Antonis
last_name: Asiminas
- first_name: Marta
full_name: Vittani, Marta
last_name: Vittani
- first_name: Tsuneko
full_name: Mishima, Tsuneko
last_name: Mishima
- first_name: Hirokazu
full_name: Hirai, Hirokazu
last_name: Hirai
- first_name: Claire Francesca
full_name: Meehan, Claire Francesca
last_name: Meehan
- first_name: Jordi
full_name: Duran, Jordi
last_name: Duran
- first_name: Joan
full_name: Guinovart, Joan
last_name: Guinovart
- first_name: Hitoshi
full_name: Ashida, Hitoshi
last_name: Ashida
- first_name: Tsuyoshi
full_name: Morita, Tsuyoshi
last_name: Morita
- first_name: Otto
full_name: Baba, Otto
last_name: Baba
- first_name: Ryuichi
full_name: Shigemoto, Ryuichi
id: 499F3ABC-F248-11E8-B48F-1D18A9856A87
last_name: Shigemoto
orcid: 0000-0001-8761-9444
- first_name: Maiken
full_name: Nedergaard, Maiken
last_name: Nedergaard
- first_name: Hajime
full_name: Hirase, Hajime
last_name: Hirase
citation:
ama: Akther S, Lee AB, Konno A, et al. Distribution and functional significance
of rodent cerebellar glycogen. iScience. 2026;29(4). doi:10.1016/j.isci.2026.115192
apa: Akther, S., Lee, A. B., Konno, A., Asiminas, A., Vittani, M., Mishima, T.,
… Hirase, H. (2026). Distribution and functional significance of rodent cerebellar
glycogen. IScience. Elsevier. https://doi.org/10.1016/j.isci.2026.115192
chicago: Akther, Sonam, Ashley Bomin Lee, Ayumu Konno, Antonis Asiminas, Marta Vittani,
Tsuneko Mishima, Hirokazu Hirai, et al. “Distribution and Functional Significance
of Rodent Cerebellar Glycogen.” IScience. Elsevier, 2026. https://doi.org/10.1016/j.isci.2026.115192.
ieee: S. Akther et al., “Distribution and functional significance of rodent
cerebellar glycogen,” iScience, vol. 29, no. 4. Elsevier, 2026.
ista: Akther S, Lee AB, Konno A, Asiminas A, Vittani M, Mishima T, Hirai H, Meehan
CF, Duran J, Guinovart J, Ashida H, Morita T, Baba O, Shigemoto R, Nedergaard
M, Hirase H. 2026. Distribution and functional significance of rodent cerebellar
glycogen. iScience. 29(4), 115192.
mla: Akther, Sonam, et al. “Distribution and Functional Significance of Rodent Cerebellar
Glycogen.” IScience, vol. 29, no. 4, 115192, Elsevier, 2026, doi:10.1016/j.isci.2026.115192.
short: S. Akther, A.B. Lee, A. Konno, A. Asiminas, M. Vittani, T. Mishima, H. Hirai,
C.F. Meehan, J. Duran, J. Guinovart, H. Ashida, T. Morita, O. Baba, R. Shigemoto,
M. Nedergaard, H. Hirase, IScience 29 (2026).
date_created: 2026-03-29T22:07:07Z
date_published: 2026-03-17T00:00:00Z
date_updated: 2026-06-18T08:32:22Z
day: '17'
ddc:
- '570'
department:
- _id: RySh
doi: 10.1016/j.isci.2026.115192
external_id:
pmid:
- '41890976'
intvolume: ' 29'
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1016/j.isci.2026.115192
month: '03'
oa: 1
oa_version: Published Version
pmid: 1
publication: iScience
publication_identifier:
eissn:
- 2589-0042
publication_status: epub_ahead
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Distribution and functional significance of rodent cerebellar glycogen
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 29
year: '2026'
...
---
OA_place: publisher
OA_type: gold
_id: '21436'
abstract:
- lang: eng
text: 'The cobalt-intercalated transition metal dichalcogenide CoxTaS2 hosts a rich
landscape of magnetic phases that depend sensitively on x. While the stoichiometric
compound with x = 1/3 exhibits a single magnetic transition, samples with x≤0.325
display two transitions with an anomalous Hall effect (AHE) emerging in the lower
temperature phase. Here, we resolve the spin structure in each phase by employing
a suite of magneto-optical probes that include the discovery of anomalous magneto-birefringence:
a spontaneous time-reversal sensitive rotation of the principal optic axes. A
symmetry-based analysis identifies the AHE-active phase as an anisotropic (2+1)Q
state, in which magnetic modulation at one wavevector (Q) differs in symmetry
from that at the remaining two. The (2+1)Q state naturally exhibits scalar spin
chirality as a mechanism for the AHE and expands the classification of multi-Q
magnetic phases.'
acknowledgement: 'We thank Linda Ye and Yue Sun for helpful discussion. Experimental
and theoretical work at LBNL and UC Berkeley was funded by the Quantum Materials
(KC2202) program under the U.S. Department of Energy, Office of Science, Office
of Basic Energy Sciences, Materials Sciences and Engineering Division under Contract
No. DE-AC02-05CH11231. V.S. and J.O. received support from the Gordon and Betty
Moore Foundation’s EPiQS Initiative through Grant GBMF4537 to J.O. at UC Berkeley.
J.K. received support from the National Science Foundation Graduate Research Fellowship
Program under Grant No. 2146752. Any opinions, findings, and conclusions or recommendations
expressed in this material are those of the author(s) and do not necessarily reflect
the views of the National Science Foundation. During the preparation of this manuscript,
we became aware of the following related work: refs. 56,57,58.'
article_number: '2507.12588'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Jonathon
full_name: Kruppe, Jonathon
last_name: Kruppe
- first_name: Josue
full_name: Rodriguez, Josue
last_name: Rodriguez
- first_name: Catherine
full_name: Xu, Catherine
last_name: Xu
- first_name: James
full_name: Analytis, James
last_name: Analytis
- first_name: Joseph
full_name: Orenstein, Joseph
last_name: Orenstein
- first_name: Veronika
full_name: Sunko, Veronika
id: 23cb1cf6-2c7a-11ef-91a4-f72fc19f20b3
last_name: Sunko
orcid: 0000-0003-2724-3523
citation:
ama: Kruppe J, Rodriguez J, Xu C, Analytis J, Orenstein J, Sunko V. Anisotropic
multi-Q order in CoxTaS2. npj Quantum Materials. 2026. doi:10.1038/s41535-026-00856-w
apa: Kruppe, J., Rodriguez, J., Xu, C., Analytis, J., Orenstein, J., & Sunko,
V. (2026). Anisotropic multi-Q order in CoxTaS2. Npj Quantum Materials.
Springer Nature. https://doi.org/10.1038/s41535-026-00856-w
chicago: Kruppe, Jonathon, Josue Rodriguez, Catherine Xu, James Analytis, Joseph
Orenstein, and Veronika Sunko. “Anisotropic Multi-Q Order in CoxTaS2.” Npj
Quantum Materials. Springer Nature, 2026. https://doi.org/10.1038/s41535-026-00856-w.
ieee: J. Kruppe, J. Rodriguez, C. Xu, J. Analytis, J. Orenstein, and V. Sunko, “Anisotropic
multi-Q order in CoxTaS2,” npj Quantum Materials. Springer Nature, 2026.
ista: Kruppe J, Rodriguez J, Xu C, Analytis J, Orenstein J, Sunko V. 2026. Anisotropic
multi-Q order in CoxTaS2. npj Quantum Materials., 2507.12588.
mla: Kruppe, Jonathon, et al. “Anisotropic Multi-Q Order in CoxTaS2.” Npj Quantum
Materials, 2507.12588, Springer Nature, 2026, doi:10.1038/s41535-026-00856-w.
short: J. Kruppe, J. Rodriguez, C. Xu, J. Analytis, J. Orenstein, V. Sunko, Npj
Quantum Materials (2026).
corr_author: '1'
date_created: 2026-03-11T10:39:55Z
date_published: 2026-04-09T00:00:00Z
date_updated: 2026-06-18T08:32:52Z
day: '09'
ddc:
- '530'
department:
- _id: VeSu
doi: 10.1038/s41535-026-00856-w
external_id:
arxiv:
- '2507.12588'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1038/s41535-026-00856-w
month: '04'
oa: 1
oa_version: Published Version
publication: npj Quantum Materials
publication_identifier:
eissn:
- 2397-4648
publication_status: epub_ahead
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Anisotropic multi-Q order in CoxTaS2
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2026'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
PlanS_conform: '1'
_id: '21986'
abstract:
- lang: eng
text: Over the past two decades, molecular electronics has made significant progress
toward discovering nanoscale analogues of conventional electronic components,
largely enabled by the development of the scanning tunneling microscope-based
break-junction (STM-BJ) technique. The STM-BJ technique enables precise and highly
reproducible measurement of a molecule’s electronic transport properties, making
it a powerful technique to explore physiochemical and electrochemical phenomena
that are otherwise difficult to access. It has gained substantial popularity in
the past 20 years, with experiments becoming increasingly diverse and sophisticated.
Despite the wealth of literature, an accessible, practical guide to performing
STM-BJ experiments and interpreting the data is largely absent. This tutorial
includes a brief background into the development of STM-BJ measurements, followed
by detailed explanations of instrumentation, data collection, statistical analysis,
variations on standard experiments, and some troubleshooting methods. It is aimed
at researchers looking to begin or improve STM-BJ studies in their laboratories,
graduate students and postdoctoral researchers learning the technique, and readers
seeking to critically evaluate the growing body of STM-BJ literature.
acknowledgement: We thank Michael Inkpen, Timothy Su, Masha Kamenetska, and Wanzhuo
Shi for comments and Jyotisman Hazarika for data collection. This work was supported
in part by the National Science Foundation (NSF-DMR 2241180) and by the Institute
of Science and Technology Austria.
article_processing_charge: Yes
article_type: original
author:
- first_name: Emma
full_name: York, Emma
id: 08dde91e-8e0a-11f0-9d7d-9e8d80864f16
last_name: York
- first_name: Latha
full_name: Venkataraman, Latha
id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
last_name: Venkataraman
orcid: 0000-0002-6957-6089
citation:
ama: York E, Venkataraman L. Scanning tunneling microscope-based break-junction
technique - A tutorial. ACS Physical Chemistry Au. 2026;6(3):408-424. doi:10.1021/acsphyschemau.6c00026
apa: York, E., & Venkataraman, L. (2026). Scanning tunneling microscope-based
break-junction technique - A tutorial. ACS Physical Chemistry Au. American
Chemical Society. https://doi.org/10.1021/acsphyschemau.6c00026
chicago: York, Emma, and Latha Venkataraman. “Scanning Tunneling Microscope-Based
Break-Junction Technique - A Tutorial.” ACS Physical Chemistry Au. American
Chemical Society, 2026. https://doi.org/10.1021/acsphyschemau.6c00026.
ieee: E. York and L. Venkataraman, “Scanning tunneling microscope-based break-junction
technique - A tutorial,” ACS Physical Chemistry Au, vol. 6, no. 3. American
Chemical Society, pp. 408–424, 2026.
ista: York E, Venkataraman L. 2026. Scanning tunneling microscope-based break-junction
technique - A tutorial. ACS Physical Chemistry Au. 6(3), 408–424.
mla: York, Emma, and Latha Venkataraman. “Scanning Tunneling Microscope-Based Break-Junction
Technique - A Tutorial.” ACS Physical Chemistry Au, vol. 6, no. 3, American
Chemical Society, 2026, pp. 408–24, doi:10.1021/acsphyschemau.6c00026.
short: E. York, L. Venkataraman, ACS Physical Chemistry Au 6 (2026) 408–424.
corr_author: '1'
date_created: 2026-06-10T07:38:41Z
date_published: 2026-05-04T00:00:00Z
date_updated: 2026-06-19T06:35:58Z
day: '04'
ddc:
- '540'
department:
- _id: LaVe
doi: 10.1021/acsphyschemau.6c00026
external_id:
pmid:
- '42221941'
file:
- access_level: open_access
checksum: 1dc16bdfb1c1cd3acde802f4350cb42a
content_type: application/pdf
creator: dernst
date_created: 2026-06-19T06:31:16Z
date_updated: 2026-06-19T06:31:16Z
file_id: '22020'
file_name: 2026_ACSPhysChem_York.pdf
file_size: 11251172
relation: main_file
success: 1
file_date_updated: 2026-06-19T06:31:16Z
has_accepted_license: '1'
intvolume: ' 6'
issue: '3'
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
page: 408-424
pmid: 1
publication: ACS Physical Chemistry Au
publication_identifier:
eissn:
- 2694-2445
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Scanning tunneling microscope-based break-junction technique - A tutorial
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 6
year: '2026'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '21987'
abstract:
- lang: eng
text: 'We introduce JODIE, a genetic joint modeling approach that estimates how
DNA loci influence human traits by partitioning genetic effects into four components:
direct effects (from a child’s alleles), indirect maternal and paternal effects
(from parents’ alleles), and parent-of-origin (PofO) effects (dependent on parental
transmission of alleles), while uniquely accounting for assortative mating. We
analyze 30,000 child-mother-father trios from the Estonian Biobank and the Norwegian
Mother, Father, and Child Cohort, focusing on height, body mass index, and childhood
educational test scores. We find direct effects to be the largest contributor
to trait variation, but combined, indirect parental and PofO effects are similarly
substantial. We support our results by within-family genome-wide association testing
and identify 276 independently associated DNA regions with a complex interplay
between direct, indirect, and PofO effects. By joint modeling, we show that direct,
indirect, and PofO effects collectively shape human phenotypic variation across
loci genome-wide.'
acknowledged_ssus:
- _id: ScienComp
acknowledgement: "We thank Zoltan Kutalik, Peter Visscher, and members of the Robinson
group at ISTA for their comments, which improved this manuscript. This work was
funded by an SNSF Eccellenza Grant to M.R.R. (PCEGP3-181181) and by core funding
from the Institute of Science and Technology Austria.\r\nThe Norwegian Mother, Father,
and Child Cohort Study is supported by the Norwegian Ministry of Health and Care
Services and the Ministry of Education and Research. We are grateful to all the
participating families in Norway who take part in this on-going cohort study. We
thank the Norwegian Institute of Public Health (NIPH) for generating high-quality
genomic data. The research is part of the HARVEST collaboration, supported by the
Research Council of Norway (#229624). We also thank the NORMENT Center for providing
genotype data, funded by the Research Council of Norway (#223273), South East Norway
Health Authorities, and Stiftelsen Kristian Gerhard Jebsen, and in collaboration
with deCODE Genetics. We further thank the Center for Diabetes Research, the University
of Bergen for providing genotype data funded by the ERC AdG project SELECTionPREDISPOSED,
Stiftelsen Kristian Gerhard Jebsen, Trond Mohn Foundation, the Research Council
of Norway, the Novo Nordisk Foundation, the University of Bergen, and the Western
Norway Health Authorities. The MoBa work was performed on the TSD (Tjeneste for
Sensitive Data) facilities, owned by the University of Oslo, operated and developed
by the TSD service group at the University of Oslo, IT Department (USIT, tsd-drift@usit.uio.no).
E.Y. is supported by the European Union (grant numbers 101045526 and 101073237)
and the Research Council of Norway (grant numbers 336078, 288083, and 331640).\r\nWe
would like to acknowledge the participants and investigators of the Generation Scotland
Cohort study. Generation Scotland received core support from the Chief Scientist
Office of the Scottish Government Health Directorates (CZD/16/6) and the Scottish
Funding Council (HR03006). Genotyping and methylation typing of the GS:SFHS samples
was carried out by the Genetics Core Laboratory at the Wellcome Trust Clinical Research
Facility, Edinburgh, Scotland and was funded by the Medical Research Council UK
and the Wellcome Trust (Wellcome Trust Strategic Award “STratifying Resilience and
Depression Longitudinally” [STRADL] ref. 104036/Z/14/Z).\r\nWe would like to thank
and acknowledge the participants and investigators of the Estonian Biobank (EstBB)
study. The research was conducted using the Estonian Center of Genomics/Roadmap
II funded by the Estonian Research Council (project number TT17).\r\nNorwegian analyses
were performed on resources provided by Sigma2 - the National Infrastructure for
High-Performance Computing and Data Storage in Norway. Estonian Data analysis was
carried out in the High-Performance Computing Center cloud provided by University
of Tartu. Analysis of the Generation Scotland data and the summary statistics obtained
from the other analyses was conducted at IST Austria and is supported by the Scientific
Service Units (SSU) of IST Austria through resources provided by Scientific Computing
(SciComp)."
article_number: '101277'
article_processing_charge: Yes
article_type: original
author:
- first_name: Ilse
full_name: Krätschmer, Ilse
id: 30d4014e-7753-11eb-b44b-db6d61112e73
last_name: Krätschmer
orcid: 0000-0002-5636-9259
- first_name: Laura
full_name: Hegemann, Laura
last_name: Hegemann
- first_name: Robin J.
full_name: Hofmeister, Robin J.
last_name: Hofmeister
- first_name: Elizabeth C.
full_name: Corfield, Elizabeth C.
last_name: Corfield
- first_name: Mahdi
full_name: Mahmoudi, Mahdi
last_name: Mahmoudi
- first_name: Olivier
full_name: Delaneau, Olivier
last_name: Delaneau
- first_name: Ole A.
full_name: Andreassen, Ole A.
last_name: Andreassen
- first_name: Archie
full_name: Campbell, Archie
last_name: Campbell
- first_name: Caroline
full_name: Hayward, Caroline
last_name: Hayward
- first_name: Riccardo E.
full_name: Marioni, Riccardo E.
last_name: Marioni
- first_name: Eivind
full_name: Ystrom, Eivind
last_name: Ystrom
- first_name: Alexandra
full_name: Havdahl, Alexandra
last_name: Havdahl
- first_name: Matthew Richard
full_name: Robinson, Matthew Richard
id: E5D42276-F5DA-11E9-8E24-6303E6697425
last_name: Robinson
orcid: 0000-0001-8982-8813
citation:
ama: Krätschmer I, Hegemann L, Hofmeister RJ, et al. Separating direct, indirect,
and parent-of-origin genetic effects in the human population. Cell Genomics.
doi:10.1016/j.xgen.2026.101277
apa: Krätschmer, I., Hegemann, L., Hofmeister, R. J., Corfield, E. C., Mahmoudi,
M., Delaneau, O., … Robinson, M. R. (n.d.). Separating direct, indirect, and parent-of-origin
genetic effects in the human population. Cell Genomics. Elsevier. https://doi.org/10.1016/j.xgen.2026.101277
chicago: Krätschmer, Ilse, Laura Hegemann, Robin J. Hofmeister, Elizabeth C. Corfield,
Mahdi Mahmoudi, Olivier Delaneau, Ole A. Andreassen, et al. “Separating Direct,
Indirect, and Parent-of-Origin Genetic Effects in the Human Population.” Cell
Genomics. Elsevier, n.d. https://doi.org/10.1016/j.xgen.2026.101277.
ieee: I. Krätschmer et al., “Separating direct, indirect, and parent-of-origin
genetic effects in the human population,” Cell Genomics. Elsevier.
ista: Krätschmer I, Hegemann L, Hofmeister RJ, Corfield EC, Mahmoudi M, Delaneau
O, Andreassen OA, Campbell A, Hayward C, Marioni RE, Ystrom E, Havdahl A, Robinson
MR. Separating direct, indirect, and parent-of-origin genetic effects in the human
population. Cell Genomics., 101277.
mla: Krätschmer, Ilse, et al. “Separating Direct, Indirect, and Parent-of-Origin
Genetic Effects in the Human Population.” Cell Genomics, 101277, Elsevier,
doi:10.1016/j.xgen.2026.101277.
short: I. Krätschmer, L. Hegemann, R.J. Hofmeister, E.C. Corfield, M. Mahmoudi,
O. Delaneau, O.A. Andreassen, A. Campbell, C. Hayward, R.E. Marioni, E. Ystrom,
A. Havdahl, M.R. Robinson, Cell Genomics (n.d.).
corr_author: '1'
date_created: 2026-06-10T07:39:08Z
date_published: 2026-06-09T00:00:00Z
date_updated: 2026-06-19T07:00:47Z
day: '09'
department:
- _id: MaRo
doi: 10.1016/j.xgen.2026.101277
external_id:
pmid:
- '40909755'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1016/j.xgen.2026.101277
month: '06'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 9B8D11D6-BA93-11EA-9121-9846C619BF3A
grant_number: PCEGP3_181181
name: Improving estimation and prediction of common complex disease risk
publication: Cell Genomics
publication_identifier:
eissn:
- 2666-979X
publication_status: inpress
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Separating direct, indirect, and parent-of-origin genetic effects in the human
population
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2026'
...
---
OA_place: repository
OA_type: green
_id: '21994'
abstract:
- lang: eng
text: Adaptive plant development is orchestrated, among others, by directional,
intercellular transport of the phytohormone auxin. Self-organizing development,
such as flexible vasculature formation, depends on so-called auxin canalization,
manifested by the gradual formation of auxin transport channels through feedback
between auxin signalling and transport. Herein, we identify MAKR6 as an important,
novel component in this feedback. MAKR6 expression accumulates strongly in vascular
cells and is tightly regulated by auxin via the Aux/IAA-ARF-WRKY23 transcriptional
network. MAKR6 is required for auxin canalization-dependent processes, including
leaf venation, vasculature regeneration, and de novo auxin channel formation from
local auxin sources. Mechanistically, MAKR6 interacts with the PIN1 auxin transporter,
modulating its trafficking and polarization. MAKR6 also associates with and integrates
two key receptor-like kinase complexes involved in canalization, TMK1/4 and the
CAMEL-CANAR. Together, our study establishes MAKR6 as a multifaceted regulator
that couples transcriptional auxin signalling to PIN1 repolarization and coordinates
multiple RLK-mediated signalling pathways during canalization. This provides mechanistic
insights into auxin canalization and exemplifies a framework for exploring similar
regulatory nodes in other developmental contexts.
acknowledgement: 'We would like to thank Dr. Yvon Jaillais (ENS, Lyon) for sharing
MAKR2 materials. This research was supported by the Scientific Service Units (SSU)
of ISTA through resources provided by the Imaging & Optics Facility (IOF) and the
Lab Support Facility (LSF). The research in the Friml group leading to these results
was funded by the European Research Council (ERC): 101142681 CYNIPS; and the Austrian
Science Fund (FWF): I 6123-B and P 37051-B. Ewa Mazur was supported by the National
Science Centre (NCN), Poland, under the OPUS call in the WEAVE programme: 2021/43/I/NZ1/01835.'
article_processing_charge: No
author:
- first_name: Zengxiang
full_name: Ge, Zengxiang
id: f43371a3-09ff-11eb-8013-bd0c6a2f6de8
last_name: Ge
orcid: 0000-0001-9381-3577
- first_name: Lilla
full_name: Koczka, Lilla
last_name: Koczka
- first_name: Ewa
full_name: Mazur, Ewa
last_name: Mazur
- first_name: Gergely
full_name: Molnar, Gergely
id: 34F1AF46-F248-11E8-B48F-1D18A9856A87
last_name: Molnar
- first_name: Dmitrii
full_name: Vladimirtsev, Dmitrii
id: 60466724-5355-11ee-ae5a-fa55e8f99c3d
last_name: Vladimirtsev
- first_name: Nada
full_name: Kassem, Nada
last_name: Kassem
- first_name: Sara
full_name: Ait Ikene, Sara
id: 6a0bb896-6bad-11f1-9bef-906e9eb76034
last_name: Ait Ikene
- first_name: Lukas
full_name: Fiedler, Lukas
id: 7c417475-8972-11ed-ae7b-8b674ca26986
last_name: Fiedler
- first_name: Jiří
full_name: Friml, Jiří
id: 4159519E-F248-11E8-B48F-1D18A9856A87
last_name: Friml
orcid: 0000-0002-8302-7596
citation:
ama: Ge Z, Koczka L, Mazur E, et al. MAKR6 integrates TMK and CAMEL/CANAR signalling
for auxin canalization in Arabidopsis. bioRxiv. doi:10.1101/2025.10.07.680881
apa: Ge, Z., Koczka, L., Mazur, E., Molnar, G., Vladimirtsev, D., Kassem, N., …
Friml, J. (n.d.). MAKR6 integrates TMK and CAMEL/CANAR signalling for auxin canalization
in Arabidopsis. bioRxiv. https://doi.org/10.1101/2025.10.07.680881
chicago: Ge, Zengxiang, Lilla Koczka, Ewa Mazur, Gergely Molnar, Dmitrii Vladimirtsev,
Nada Kassem, Sara Ait Ikene, Lukas Fiedler, and Jiří Friml. “MAKR6 Integrates
TMK and CAMEL/CANAR Signalling for Auxin Canalization in Arabidopsis.” BioRxiv,
n.d. https://doi.org/10.1101/2025.10.07.680881.
ieee: Z. Ge et al., “MAKR6 integrates TMK and CAMEL/CANAR signalling for
auxin canalization in Arabidopsis,” bioRxiv. .
ista: Ge Z, Koczka L, Mazur E, Molnar G, Vladimirtsev D, Kassem N, Ait Ikene S,
Fiedler L, Friml J. MAKR6 integrates TMK and CAMEL/CANAR signalling for auxin
canalization in Arabidopsis. bioRxiv, 10.1101/2025.10.07.680881.
mla: Ge, Zengxiang, et al. “MAKR6 Integrates TMK and CAMEL/CANAR Signalling for
Auxin Canalization in Arabidopsis.” BioRxiv, doi:10.1101/2025.10.07.680881.
short: Z. Ge, L. Koczka, E. Mazur, G. Molnar, D. Vladimirtsev, N. Kassem, S. Ait
Ikene, L. Fiedler, J. Friml, BioRxiv (n.d.).
corr_author: '1'
date_created: 2026-06-13T16:57:07Z
date_published: 2026-05-30T00:00:00Z
date_updated: 2026-06-19T07:14:01Z
day: '30'
ddc:
- '580'
department:
- _id: GradSch
- _id: JiFr
doi: 10.1101/2025.10.07.680881
has_accepted_license: '1'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc-nd/4.0/
main_file_link:
- open_access: '1'
url: https://doi.org/10.1101/2025.10.07.680881
month: '05'
oa: 1
oa_version: Preprint
project:
- _id: 8f347782-16d5-11f0-9cad-8c19706ee739
grant_number: '101142681'
name: Cyclic nucleotides as second messengers in plants
- _id: bd76d395-d553-11ed-ba76-f678c14f9033
grant_number: I06123
name: Peptide receptors for auxin canalization in Arabidopsis
- _id: 7bcece63-9f16-11ee-852c-ae94e099eeb6
grant_number: P37051
name: Guanylate cyclase activity of TIR1/AFBs auxin receptors
publication: bioRxiv
publication_status: submitted
scopus_import: '1'
status: public
title: MAKR6 integrates TMK and CAMEL/CANAR signalling for auxin canalization in Arabidopsis
tmp:
image: /images/cc_by_nc_nd.png
legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
(CC BY-NC-ND 4.0)
short: CC BY-NC-ND (4.0)
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2026'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
PlanS_conform: '1'
_id: '21998'
abstract:
- lang: eng
text: Little Red Dots (LRDs), among the most enigmatic high-redshift discoveries
by JWST, are commonly believed to be powered by accreting supermassive black holes.
Here, we explore the possibility that these sources are globular clusters in formation,
with rest-frame UV arising from a very young stellar population and rest-frame
optical from a short-lived supermassive (>104 M⊙) star. The spectral profiles
of LRDs are broadly consistent with this scenario, though the observed temperatures
and bolometric luminosities favor emission reprocessed by optically thick continuum-driven
winds not fully captured by current models. The LRD z ∼ 5−7 UV luminosity function
naturally evolves, under standard evolutionary and mass-loss prescriptions, into
a present-day mass function with a turnover at log10(M*/M⊙) = 5.3 and an exponential
cutoff at high masses, consistent with local globular cluster populations. We
estimate the total present-day number density of LRDs formed across all redshifts
to be ≈0.3 Mpc−3, similar within uncertainties to local globular clusters. The
observed LRD redshift range matches the age distribution of metal-poor globular
clusters, without current LRD counterparts to the metal-rich population. If LRDs
are globular clusters in formation, we predict chemical abundance patterns characteristic
of multiple stellar populations, including enhanced He and N, and potential Na–O
and Al–Mg anticorrelations. These results offer a local perspective to explore
this surprisingly abundant population of distant sources, and a potential new
window into extreme stellar astrophysics in the early Universe.
acknowledgement: "We thank the referees for detailed and highly constructive reports
that significantly improved the scope and breadth of the manuscript. J.C. thanks
Hollis Akins, Volker Bromm, Rui Chaves-Marques, Steve Finkelstein, Karl Gebhardt,
Keith Hawkins, Harley Katz, Stellar Offner, Daniel Schaerer, Grace Telford, and
Jorick Vink for conversations that improved the Letter. A.d.G. acknowledges support
from a Clay Fellowship awarded by the Smithsonian Astrophysical Observatory. M.B.K.
acknowledges support from NSF grants AST-2108962 and AST-2408247; NASA grant 80NSSC22K0827;
HST-GO-16686, HST-AR-17028, JWST-GO-03788, and JWST-AR-06278 from the Space Telescope
Science Institute, which is operated by AURA, Inc., under NASA contract NAS5-26555;
and from the Samuel T. and Fern Yanagisawa Regents Professorship in Astronomy at
UT Austin. A.A.C.S. acknowledges support by the Deutsche Forschungsgemeinschaft
(DFG, German Research Foundation) in the form of an Emmy Noether Research Group—Project-ID
445674056 (SA4064/1-1, PI Sander). A.A.C.S. further acknowledges support from the
Deutsches Zentrum für Luft und Raumfahrt (DLR) grant grants 50 OR 2509 (PI: A.A.C.
Sander) and 50 OR 2306 (PI: V. Ramachandran/A.A.C. Sander) as well as from the Federal
Ministry of Research, Technology, and Space (BMFTR) and the Baden-Württemberg Ministry
of Science as part of the Excellence Strategy of the German Federal and State Governments.
This project was cofunded by the European Union (Project 101183150—OCEANS).\r\n\r\nThis
work is based in part on observations made with the NASA/ESA/CSA James Webb Space
Telescope. The data were obtained from the Mikulski Archive for Space Telescopes
at the Space Telescope Science Institute, which is operated by the Association of
Universities for Research in Astronomy, Inc., under NASA contract NAS 5-03127 for
JWST. These observations are associated with programs 1180, 1181, 1208, 1212, 1213,
1215, 1286, 1345, 1433, 2198, 2561, 2750, 2767, 4106, 4233, 5105, 5224, 6368, and
6585."
article_number: L4
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: John
full_name: Chisholm, John
last_name: Chisholm
- first_name: Danielle A.
full_name: Berg, Danielle A.
last_name: Berg
- first_name: Michael
full_name: Boylan-Kolchin, Michael
last_name: Boylan-Kolchin
- first_name: Anna
full_name: De Graaff, Anna
last_name: De Graaff
- first_name: Lukas J.
full_name: Furtak, Lukas J.
last_name: Furtak
- first_name: Vasily
full_name: Kokorev, Vasily
last_name: Kokorev
- first_name: Jorryt J
full_name: Matthee, Jorryt J
id: 7439a258-f3c0-11ec-9501-9df22fe06720
last_name: Matthee
orcid: 0000-0003-2871-127X
- first_name: Julian B.
full_name: Muñoz, Julian B.
last_name: Muñoz
- first_name: Rohan P.
full_name: Naidu, Rohan P.
last_name: Naidu
- first_name: Andreas A.C.
full_name: Sander, Andreas A.C.
last_name: Sander
citation:
ama: Chisholm J, Berg DA, Boylan-Kolchin M, et al. Little Red Dots as globular clusters
in formation. The Astrophysical Journal Letters. 2026;1004(1). doi:10.3847/2041-8213/ae6dae
apa: Chisholm, J., Berg, D. A., Boylan-Kolchin, M., De Graaff, A., Furtak, L. J.,
Kokorev, V., … Sander, A. A. C. (2026). Little Red Dots as globular clusters in
formation. The Astrophysical Journal Letters. IOP Publishing. https://doi.org/10.3847/2041-8213/ae6dae
chicago: Chisholm, John, Danielle A. Berg, Michael Boylan-Kolchin, Anna De Graaff,
Lukas J. Furtak, Vasily Kokorev, Jorryt J Matthee, Julian B. Muñoz, Rohan P. Naidu,
and Andreas A.C. Sander. “Little Red Dots as Globular Clusters in Formation.”
The Astrophysical Journal Letters. IOP Publishing, 2026. https://doi.org/10.3847/2041-8213/ae6dae.
ieee: J. Chisholm et al., “Little Red Dots as globular clusters in formation,”
The Astrophysical Journal Letters, vol. 1004, no. 1. IOP Publishing, 2026.
ista: Chisholm J, Berg DA, Boylan-Kolchin M, De Graaff A, Furtak LJ, Kokorev V,
Matthee JJ, Muñoz JB, Naidu RP, Sander AAC. 2026. Little Red Dots as globular
clusters in formation. The Astrophysical Journal Letters. 1004(1), L4.
mla: Chisholm, John, et al. “Little Red Dots as Globular Clusters in Formation.”
The Astrophysical Journal Letters, vol. 1004, no. 1, L4, IOP Publishing,
2026, doi:10.3847/2041-8213/ae6dae.
short: J. Chisholm, D.A. Berg, M. Boylan-Kolchin, A. De Graaff, L.J. Furtak, V.
Kokorev, J.J. Matthee, J.B. Muñoz, R.P. Naidu, A.A.C. Sander, The Astrophysical
Journal Letters 1004 (2026).
date_created: 2026-06-14T22:01:42Z
date_published: 2026-06-10T00:00:00Z
date_updated: 2026-06-19T09:50:33Z
day: '10'
ddc:
- '520'
department:
- _id: JoMa
doi: 10.3847/2041-8213/ae6dae
external_id:
arxiv:
- '2602.15935'
file:
- access_level: open_access
checksum: 66949af6e620c8ef37de42688829a3e3
content_type: application/pdf
creator: dernst
date_created: 2026-06-19T09:45:21Z
date_updated: 2026-06-19T09:45:21Z
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file_name: 2026_AstrophysicalJourLetters_Chisholm.pdf
file_size: 919919
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success: 1
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intvolume: ' 1004'
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language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
publication: The Astrophysical Journal Letters
publication_identifier:
eissn:
- 2041-8213
issn:
- 2041-8205
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Little Red Dots as globular clusters in formation
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 1004
year: '2026'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
PlanS_conform: '1'
_id: '21997'
abstract:
- lang: eng
text: 'The massive binary common envelope (CE) phase plays a pivotal role in the
formation of close black hole (BH)/neutron star binaries, yet significant uncertainties
remain in our understanding of this process. In this study, we aim to constrain
the massive binary CE phase by systematically reconstructing three observed BH
X-ray binaries (BHXBs): GRO J1655-40, SAX J1819.3-2525, and 4U 1543-47. Through
comprehensive binary evolution simulations and parametric supernova modeling,
we establish lower limits for the CE efficiency parameters under different energy
considerations within the standard energy formalism. Specifically, we derive minimum
values for three cases: α0.5U and αU, representing CE efficiencies with half and
all of the internal energy contributing to the envelope ejection, respectively,
and αH, accounting for the envelope’s enthalpy. Our analysis reveals that the
self-consistent formation of these three BHXBs requires CE efficiency parameters
satisfying α0.5U ≳ 6.7, αU ≳ 4.2, and αH ≳ 1.7. Notably, we find no viable solutions
with CE efficiency values below unity, even when considering the most extreme
scenarios, in which the envelope binding energy is significantly reduced through
enthalpy inclusion. Our results strongly imply that either additional energy sources
are required or the formalism itself must be revised. Furthermore, we quantitatively
assess the impact of BH natal kicks on our results. A key finding is that 4U 1543-47’s
formation requires substantial natal kicks (≳50 km s−1), as lower kick velocities
are incompatible with isolated binary evolution.'
acknowledgement: We deeply thank the referee for a very careful reading and constructive
comments that have led to the improvement of the manuscript. The authors are grateful
to Poshak Gandhi for his valuable suggestions and feedback on this work. This work
is supported by the Natural Science Foundation of China (grant Nos. 12125303, 12525304,
12288102, 12473034, 12103028, 12333008, 12422305, 12090040/3, 12273105, 11703081,
11422324, 12073070, and 12173081), the CAS Project for Young Scientists in Basic
Research (YSBR-148), the Strategic Priority Research Program of the Chinese Academy
of Sciences (grant Nos. XDB1160303, XDB1160201, and XDB1160000), the National Key
R&D Program of China (grant Nos. 2021YFA1600403 and 2021YFA1600400), the Key Research
Program of Frontier Sciences of CAS (No. ZDBS-LY-7005), the “CAS Light of West China”,
the Yunnan Revitalization Talent Support Program-Science & Technology Champion Project
(No. 202305AB350003) and Young Talent Project, the International Centre of Supernovae
(ICESUN), Yunnan Key Laboratory of Supernova Research (Nos. 202302AN360001 and 202201BC070003),
Yunnan Fundamental Research Projects (No. 202401AT070139), and the Natural Science
Foundation of Henan Province (No. 242300420944). X.C. acknowledges the New Cornerstone
Science Foundation through the XPLORER PRIZE. The authors gratefully acknowledge
the “PHOENIX Supercomputing Platform” jointly operated by the Binary Population
Synthesis Group and the Stellar Astrophysics Group at Yunnan Observatories, Chinese
Academy of Sciences.
article_number: '31'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Zhenwei
full_name: Li, Zhenwei
last_name: Li
- first_name: Dandan
full_name: Wei, Dandan
id: 5dd129bd-0601-11ef-b325-833284687b76
last_name: Wei
- first_name: Shi
full_name: Jia, Shi
last_name: Jia
- first_name: Hailiang
full_name: Chen, Hailiang
last_name: Chen
- first_name: Hongwei
full_name: Ge, Hongwei
last_name: Ge
- first_name: Zhuo
full_name: Chen, Zhuo
last_name: Chen
- first_name: Yangyang
full_name: Zhang, Yangyang
last_name: Zhang
- first_name: Xuefei
full_name: Chen, Xuefei
last_name: Chen
- first_name: Zhanwen
full_name: Han, Zhanwen
last_name: Han
citation:
ama: 'Li Z, Wei D, Jia S, et al. A path to constraints on common envelope ejection
in massive binaries: Full evolutionary reconstruction of three Black Hole X-ray
binaries. The Astrophysical Journal. 2026;1004(1). doi:10.3847/1538-4357/ae66fd'
apa: 'Li, Z., Wei, D., Jia, S., Chen, H., Ge, H., Chen, Z., … Han, Z. (2026). A
path to constraints on common envelope ejection in massive binaries: Full evolutionary
reconstruction of three Black Hole X-ray binaries. The Astrophysical Journal.
IOP Publishing. https://doi.org/10.3847/1538-4357/ae66fd'
chicago: 'Li, Zhenwei, Dandan Wei, Shi Jia, Hailiang Chen, Hongwei Ge, Zhuo Chen,
Yangyang Zhang, Xuefei Chen, and Zhanwen Han. “A Path to Constraints on Common
Envelope Ejection in Massive Binaries: Full Evolutionary Reconstruction of Three
Black Hole X-Ray Binaries.” The Astrophysical Journal. IOP Publishing,
2026. https://doi.org/10.3847/1538-4357/ae66fd.'
ieee: 'Z. Li et al., “A path to constraints on common envelope ejection in
massive binaries: Full evolutionary reconstruction of three Black Hole X-ray binaries,”
The Astrophysical Journal, vol. 1004, no. 1. IOP Publishing, 2026.'
ista: 'Li Z, Wei D, Jia S, Chen H, Ge H, Chen Z, Zhang Y, Chen X, Han Z. 2026. A
path to constraints on common envelope ejection in massive binaries: Full evolutionary
reconstruction of three Black Hole X-ray binaries. The Astrophysical Journal.
1004(1), 31.'
mla: 'Li, Zhenwei, et al. “A Path to Constraints on Common Envelope Ejection in
Massive Binaries: Full Evolutionary Reconstruction of Three Black Hole X-Ray Binaries.”
The Astrophysical Journal, vol. 1004, no. 1, 31, IOP Publishing, 2026,
doi:10.3847/1538-4357/ae66fd.'
short: Z. Li, D. Wei, S. Jia, H. Chen, H. Ge, Z. Chen, Y. Zhang, X. Chen, Z. Han,
The Astrophysical Journal 1004 (2026).
date_created: 2026-06-14T22:01:42Z
date_published: 2026-06-10T00:00:00Z
date_updated: 2026-06-19T09:58:52Z
day: '10'
ddc:
- '520'
department:
- _id: YlGo
doi: 10.3847/1538-4357/ae66fd
external_id:
arxiv:
- '2604.10440'
file:
- access_level: open_access
checksum: bb76fbb51f8d2834cb79f19e7932e3bd
content_type: application/pdf
creator: dernst
date_created: 2026-06-19T09:56:29Z
date_updated: 2026-06-19T09:56:29Z
file_id: '22099'
file_name: 2026_AstrophysicalJour_Li.pdf
file_size: 3386217
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success: 1
file_date_updated: 2026-06-19T09:56:29Z
has_accepted_license: '1'
intvolume: ' 1004'
issue: '1'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
publication: The Astrophysical Journal
publication_identifier:
eissn:
- 1538-4357
issn:
- 0004-637X
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'A path to constraints on common envelope ejection in massive binaries: Full
evolutionary reconstruction of three Black Hole X-ray binaries'
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 1004
year: '2026'
...
---
OA_place: publisher
OA_type: hybrid
_id: '14278'
abstract:
- lang: eng
text: 'The Birkhoff conjecture says that the boundary of a strictly convex integrable
billiard table is necessarily an ellipse. In this article, we consider a stronger
notion of integrability, namely, integrability close to the boundary, and prove
a local version of this conjecture: a small perturbation of almost every ellipse
that preserves integrability near the boundary, is itself an ellipse. We apply
this result to study local spectral uniqueness of ellipses using the connection
between the wave trace of the Laplacian and the dynamics near the boundary and
establish local uniqueness for almost all of them.'
acknowledgement: 'The author acknowledges the partial support of the European Research
Council Grant #885707. He also thanks Vadim Kaloshin for proposing the idea of the
project and greatly aiding the implementation. The author is also grateful to Hamid
Hezari, Amir Vig, Steve Zelditch, Comlan E. Koudjinan, Corentin Fierobe, Ngo Nhok
Tkhai Shon and Roman Sarapin for useful discussions. The author also acknowledges
partial support of ISTern summer program. The project started in the summer of 2021,
when the author was an intern at ISTA. Open access funding provided by Institute
of Science and Technology (IST Austria).'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Illya
full_name: Koval, Illya
id: 2eed1f3b-896a-11ed-bdf8-93c7c4bf159e
last_name: Koval
citation:
ama: Koval I. Local strong Birkhoff conjecture and local spectral rigidity of almost
every ellipse. Inventiones Mathematicae. 2025. doi:10.1007/s00222-025-01397-y
apa: Koval, I. (2025). Local strong Birkhoff conjecture and local spectral rigidity
of almost every ellipse. Inventiones Mathematicae. Springer Nature. https://doi.org/10.1007/s00222-025-01397-y
chicago: Koval, Illya. “Local Strong Birkhoff Conjecture and Local Spectral Rigidity
of Almost Every Ellipse.” Inventiones Mathematicae. Springer Nature, 2025.
https://doi.org/10.1007/s00222-025-01397-y.
ieee: I. Koval, “Local strong Birkhoff conjecture and local spectral rigidity of
almost every ellipse,” Inventiones Mathematicae. Springer Nature, 2025.
ista: Koval I. 2025. Local strong Birkhoff conjecture and local spectral rigidity
of almost every ellipse. Inventiones Mathematicae.
mla: Koval, Illya. “Local Strong Birkhoff Conjecture and Local Spectral Rigidity
of Almost Every Ellipse.” Inventiones Mathematicae, Springer Nature, 2025,
doi:10.1007/s00222-025-01397-y.
short: I. Koval, Inventiones Mathematicae (2025).
corr_author: '1'
date_created: 2023-09-06T08:35:43Z
date_published: 2025-12-11T00:00:00Z
date_updated: 2025-12-29T11:37:48Z
day: '11'
ddc:
- '510'
department:
- _id: GradSch
- _id: VaKa
doi: 10.1007/s00222-025-01397-y
ec_funded: 1
external_id:
arxiv:
- '2111.12171'
has_accepted_license: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1007/s00222-025-01397-y
month: '12'
oa: 1
oa_version: Published Version
project:
- _id: 9B8B92DE-BA93-11EA-9121-9846C619BF3A
call_identifier: H2020
grant_number: '885707'
name: Spectral rigidity and integrability for billiards and geodesic flows
publication: Inventiones Mathematicae
publication_identifier:
eissn:
- 1432-1297
issn:
- 0020-9910
publication_status: epub_ahead
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Local strong Birkhoff conjecture and local spectral rigidity of almost every
ellipse
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
OA_place: publisher
OA_type: gold
_id: '14647'
abstract:
- lang: eng
text: "In the developing vertebrate central nervous system, neurons and glia typically
arise\r\nsequentially from common progenitors. Here, we report that the transcription
factor Forkhead\r\nBox G1 (Foxg1) regulates gliogenesis in the mouse neocortex
via distinct cell-autonomous roles in progenitors and postmitotic neurons that
regulate different aspects of the gliogenic FGF signalling pathway. We demonstrate
that loss of Foxg1 in cortical progenitors at neurogenic stages causes premature
astrogliogenesis. We identify a novel FOXG1 target, the pro-gliogenic FGF pathway
component Fgfr3, which is suppressed by FOXG1 cell-autonomously to maintain neurogenesis.
Furthermore, FOXG1 can also suppress premature astrogliogenesis triggered by the
augmentation of FGF signalling. We identify a second novel function of FOXG1 in
regulating the expression of gliogenic cues in newborn neocortical upper-layer
neurons. Loss of FOXG1 in postmitotic neurons non-autonomously enhances gliogenesis
in the progenitors via FGF signalling. These results fit well with the model that
newborn neurons secrete cues that trigger progenitors to produce the next wave
of cell types, astrocytes. If FGF signalling is attenuated in Foxg1 null progenitors,
they progress to oligodendrocyte production. Therefore, loss of FOXG1 transitions
the progenitor to a gliogenic state, producing either astrocytes or oligodendrocytes
depending on FGF signalling levels. Our results uncover how FOXG1 integrates extrinsic
signalling via the FGF pathway to regulate the sequential generation of neurons,
astrocytes, and oligodendrocytes in the cerebral cortex. "
acknowledgement: "We thank the animal house staff of the Tata Institute of Fundamental
Research, Mumbai (TIFR), for their excellent support; Gordon Fishell (Harvard Medical
School, USA), and Goichi Miyoshi (Gunma University, Japan) for the Foxg1 floxed
mouse line; Hiroshi Kawasaki (Kanazawa University, Japan) for the plasmids pCAG-FGF8
and pCAG-sFgfr3c; Soo Kyung Lee (University at Buffalo, The State University of
New York, USA) for the Foxg1lox/lox genotyping primers and protocol. We thank Deepak
Modi and Vainav Patel (National Institute for Research in Reproductive and Child
Health, NIRRCH, Mumbai, India) for the use of the NIRRCH FACS Facility, and the
staff of the NIRRCH and TIFR FACS facilities for their assistance. We thank Denis
Jabaudon (University of Geneva, Switzerland) for his critical comments on the manuscript
and members of the Jabaudon lab for helpful discussions. This work was funded by
the Department of Atomic Energy (DAE), Govt. of India (Project Identification no.
RTI4003,\r\nDAE OM no. 1303/2/2019/R&D-II/DAE/2079). "
article_number: '101851'
article_processing_charge: Yes
article_type: original
author:
- first_name: Mahima
full_name: Bose, Mahima
last_name: Bose
- first_name: Varun
full_name: Suresh, Varun
last_name: Suresh
- first_name: Urvi
full_name: Mishra, Urvi
last_name: Mishra
- first_name: Ishita
full_name: Talwar, Ishita
last_name: Talwar
- first_name: Anuradha
full_name: Yadav, Anuradha
last_name: Yadav
- first_name: Shiona
full_name: Biswas, Shiona
last_name: Biswas
- first_name: Simon
full_name: Hippenmeyer, Simon
id: 37B36620-F248-11E8-B48F-1D18A9856A87
last_name: Hippenmeyer
orcid: 0000-0003-2279-1061
- first_name: Shubha
full_name: Tole, Shubha
last_name: Tole
citation:
ama: Bose M, Suresh V, Mishra U, et al. Dual role of FOXG1 in regulating gliogenesis
in the developing neocortex via the FGF signalling pathway. eLife. 2025;13.
doi:10.7554/elife.101851.3
apa: Bose, M., Suresh, V., Mishra, U., Talwar, I., Yadav, A., Biswas, S., … Tole,
S. (2025). Dual role of FOXG1 in regulating gliogenesis in the developing neocortex
via the FGF signalling pathway. ELife. eLife Sciences Publications. https://doi.org/10.7554/elife.101851.3
chicago: Bose, Mahima, Varun Suresh, Urvi Mishra, Ishita Talwar, Anuradha Yadav,
Shiona Biswas, Simon Hippenmeyer, and Shubha Tole. “Dual Role of FOXG1 in Regulating
Gliogenesis in the Developing Neocortex via the FGF Signalling Pathway.” ELife.
eLife Sciences Publications, 2025. https://doi.org/10.7554/elife.101851.3.
ieee: M. Bose et al., “Dual role of FOXG1 in regulating gliogenesis in the
developing neocortex via the FGF signalling pathway,” eLife, vol. 13. eLife
Sciences Publications, 2025.
ista: Bose M, Suresh V, Mishra U, Talwar I, Yadav A, Biswas S, Hippenmeyer S, Tole
S. 2025. Dual role of FOXG1 in regulating gliogenesis in the developing neocortex
via the FGF signalling pathway. eLife. 13, 101851.
mla: Bose, Mahima, et al. “Dual Role of FOXG1 in Regulating Gliogenesis in the Developing
Neocortex via the FGF Signalling Pathway.” ELife, vol. 13, 101851, eLife
Sciences Publications, 2025, doi:10.7554/elife.101851.3.
short: M. Bose, V. Suresh, U. Mishra, I. Talwar, A. Yadav, S. Biswas, S. Hippenmeyer,
S. Tole, ELife 13 (2025).
date_created: 2023-12-06T13:07:01Z
date_published: 2025-03-14T00:00:00Z
date_updated: 2025-05-14T11:41:52Z
day: '14'
ddc:
- '570'
department:
- _id: SiHi
doi: 10.7554/elife.101851.3
external_id:
pmid:
- '40085500'
file:
- access_level: open_access
checksum: 64a6a6f86e24b21fe72c7a7fd6056fed
content_type: application/pdf
creator: dernst
date_created: 2025-04-03T11:19:26Z
date_updated: 2025-04-03T11:19:26Z
file_id: '19467'
file_name: 2025_eLife_Bose.pdf
file_size: 17462771
relation: main_file
success: 1
file_date_updated: 2025-04-03T11:19:26Z
has_accepted_license: '1'
intvolume: ' 13'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
pmid: 1
publication: eLife
publication_identifier:
eissn:
- 2050-084X
publication_status: published
publisher: eLife Sciences Publications
quality_controlled: '1'
scopus_import: '1'
status: public
title: Dual role of FOXG1 in regulating gliogenesis in the developing neocortex via
the FGF signalling pathway
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 13
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '18074'
abstract:
- lang: eng
text: The Aharonov–Casher theorem is a result on the number of the so-called zero
modes of a system described by the magnetic Pauli operator in R2. In this paper
we address the same question for the Dirac operator on a flat two-dimensional
manifold with boundary and Atiyah–Patodi–Singer boundary condition. More concretely
we are interested in the plane and a disc with a finite number of circular holes
cut out. We consider a smooth compactly supported magnetic field on the manifold
and an arbitrary magnetic field inside the holes.
acknowledgement: "First and foremost I am grateful to Jan Philip Solovej for fruitful
meetings during (and after) my PhD programme, when this work was done. Further I
would like to thank Joshua Hunt, Anna Sisak, Jakub Löwit, Błażej Ruba, Volodymir
Riabov, Lukas Schimmer and Georgios Koutentakis for valuable discussions. Many thanks
belong to Rafael Benguria for hosting my visit, during which some of the work has
been done. I am also grateful to Marina Prokhorova who first initiated the discussion
of this project topic and to Annemarie Luger for her valuable comments during my
PhD defence and in particular pointing out the qualitative difference in our two
main results. I would like to acknowledge support for research on this paper from
VILLUM FONDEN through the QMATH Centre of Excellence grant. nr. 10059. This project
also received funding from the European Union’s Horizon 2020 research and innovation
programme under the Marie Skłodowska-Curie grant agreement No 101034413. I am grateful
to the two reviewers for reading carefully my manuscript and pointing out several
issues contributing thus significantly to the readability and clarity of this paper.\r\nOpen
access funding provided by Institute of Science and Technology (IST Austria)."
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Marie
full_name: Fialova, Marie
id: e9c9844d-9e21-11ec-b482-f96fc09f7c4d
last_name: Fialova
citation:
ama: Fialova M. Aharonov–Casher theorems for Dirac operators on manifolds with boundary
and APS boundary condition. Annales Henri Poincare. 2025;26:2859-2900.
doi:10.1007/s00023-024-01482-7
apa: Fialova, M. (2025). Aharonov–Casher theorems for Dirac operators on manifolds
with boundary and APS boundary condition. Annales Henri Poincare. Springer
Nature. https://doi.org/10.1007/s00023-024-01482-7
chicago: Fialova, Marie. “Aharonov–Casher Theorems for Dirac Operators on Manifolds
with Boundary and APS Boundary Condition.” Annales Henri Poincare. Springer
Nature, 2025. https://doi.org/10.1007/s00023-024-01482-7.
ieee: M. Fialova, “Aharonov–Casher theorems for Dirac operators on manifolds with
boundary and APS boundary condition,” Annales Henri Poincare, vol. 26.
Springer Nature, pp. 2859–2900, 2025.
ista: Fialova M. 2025. Aharonov–Casher theorems for Dirac operators on manifolds
with boundary and APS boundary condition. Annales Henri Poincare. 26, 2859–2900.
mla: Fialova, Marie. “Aharonov–Casher Theorems for Dirac Operators on Manifolds
with Boundary and APS Boundary Condition.” Annales Henri Poincare, vol.
26, Springer Nature, 2025, pp. 2859–900, doi:10.1007/s00023-024-01482-7.
short: M. Fialova, Annales Henri Poincare 26 (2025) 2859–2900.
corr_author: '1'
date_created: 2024-09-15T22:01:42Z
date_published: 2025-08-01T00:00:00Z
date_updated: 2025-09-30T10:22:14Z
day: '01'
ddc:
- '510'
department:
- _id: RoSe
doi: 10.1007/s00023-024-01482-7
ec_funded: 1
external_id:
arxiv:
- '2304.13373'
isi:
- '001304370000001'
file:
- access_level: open_access
checksum: d8d2d6dbce293c9ee6eaa9262e597147
content_type: application/pdf
creator: dernst
date_created: 2025-08-05T11:24:25Z
date_updated: 2025-08-05T11:24:25Z
file_id: '20124'
file_name: 2025_AnnalesHenriPoincare_Fialova.pdf
file_size: 728124
relation: main_file
success: 1
file_date_updated: 2025-08-05T11:24:25Z
has_accepted_license: '1'
intvolume: ' 26'
isi: 1
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: 2859-2900
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
call_identifier: H2020
grant_number: '101034413'
name: 'IST-BRIDGE: International postdoctoral program'
publication: Annales Henri Poincare
publication_identifier:
issn:
- 1424-0637
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Aharonov–Casher theorems for Dirac operators on manifolds with boundary and
APS boundary condition
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 26
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18154'
abstract:
- lang: eng
text: 'In 1976, Deligne and Lusztig realized the representation theory of finite
groups of Lie type inside étale cohomology of certain algebraic varieties. Recently,
a p-adic version of this theory started to emerge: there are p-adic Deligne–Lusztig
spaces, whose cohomology encodes representation theoretic information for p-adic
groups – for instance, it partially realizes the local Langlands correspondence
with characteristic zero coefficients. However, the parallel case of coefficients
of positive characteristic ℓ≠p has not been inspected so far. The purpose of
this article is to initiate such an inspection. In particular, we relate cohomology
of certain p-adic Deligne–Lusztig spaces to Vignéras''s modular local Langlands
correspondence for GLn.'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Jakub
full_name: Löwit, Jakub
id: e3b80ae2-eb8e-11eb-b029-9aef4a9108a0
last_name: Löwit
citation:
ama: Löwit J. On modulo ℓ cohomology of p-adic Deligne–Lusztig varieties for GLn.
Journal of Algebra. 2025;663(2):81-118. doi:10.1016/j.jalgebra.2024.08.033
apa: Löwit, J. (2025). On modulo ℓ cohomology of p-adic Deligne–Lusztig varieties
for GLn. Journal of Algebra. Elsevier. https://doi.org/10.1016/j.jalgebra.2024.08.033
chicago: Löwit, Jakub. “On modulo ℓ Cohomology of P-Adic Deligne–Lusztig Varieties
for GLn.” Journal of Algebra. Elsevier, 2025. https://doi.org/10.1016/j.jalgebra.2024.08.033.
ieee: J. Löwit, “On modulo ℓ cohomology of p-adic Deligne–Lusztig varieties for
GLn,” Journal of Algebra, vol. 663, no. 2. Elsevier, pp. 81–118, 2025.
ista: Löwit J. 2025. On modulo ℓ cohomology of p-adic Deligne–Lusztig varieties
for GLn. Journal of Algebra. 663(2), 81–118.
mla: Löwit, Jakub. “On modulo ℓ Cohomology of P-Adic Deligne–Lusztig Varieties for
GLn.” Journal of Algebra, vol. 663, no. 2, Elsevier, 2025, pp. 81–118,
doi:10.1016/j.jalgebra.2024.08.033.
short: J. Löwit, Journal of Algebra 663 (2025) 81–118.
corr_author: '1'
date_created: 2024-09-29T22:01:37Z
date_published: 2025-02-01T00:00:00Z
date_updated: 2025-02-27T12:32:40Z
day: '01'
ddc:
- '510'
department:
- _id: TaHa
doi: 10.1016/j.jalgebra.2024.08.033
external_id:
arxiv:
- '2404.11176'
isi:
- '001325207800001'
file:
- access_level: open_access
checksum: eb240e93c178e48429ad918c9058f1fe
content_type: application/pdf
creator: dernst
date_created: 2025-01-13T08:57:57Z
date_updated: 2025-01-13T08:57:57Z
file_id: '18830'
file_name: 2024_JourAlgebra_Loewit.pdf
file_size: 731175
relation: main_file
success: 1
file_date_updated: 2025-01-13T08:57:57Z
has_accepted_license: '1'
intvolume: ' 663'
isi: 1
issue: '2'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: 81-118
publication: Journal of Algebra
publication_identifier:
eissn:
- 1090-266X
issn:
- 0021-8693
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: On modulo ℓ cohomology of p-adic Deligne–Lusztig varieties for GLn
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 663
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18157'
abstract:
- lang: eng
text: "Interest in sliding block puzzles dates back to the 15-puzzle, seemingly
invented by Noyes Chapman in 1874 (see [23] for an account of the fascinating
history of the puzzle). The game consists of fifteen movable square blocks numbered
\r\n and arranged within a \r\n square box, leaving one empty space (see Figure
1). The task at hand is to start from a given configuration of the numbered blocks
and reach the desired target configuration, where the only allowed move is to
slide a numbered block into an adjacent empty space. This task seemed to be unpredictably
either very easy to accomplish, or completely impossible, and the puzzle turned
into a worldwide sensation in the spring of 1880. A particularly challenging instance,
known as the 13-15-14 puzzle, consisted of initial and target configurations that
differed by a single swap (historically this swap involved the blocks labeled
14 and 15). The craze of this puzzle was such that it consistently made newspaper
headlines in 1880, with an article in the New York Times lamenting that it was
“threatening our free institutions” [23, p. 9]. Various prizes were offered for
anyone who could solve this challenge, beginning with a $25 set of teeth and culminating
with Sam Loyd’s famous $1,000 cash prize."
acknowledgement: Open access funding provided by Copenhagen University.
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Florestan R
full_name: Brunck, Florestan R
id: 6ab6e556-f394-11eb-9cf6-9dfb78f00d8d
last_name: Brunck
- first_name: Matthew Alan
full_name: Kwan, Matthew Alan
id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3
last_name: Kwan
orcid: 0000-0002-4003-7567
citation:
ama: 'Brunck FR, Kwan MA. Books, Hallways, and social butterflies: A note on sliding
block puzzles. Mathematical Intelligencer. 2025;47:52-65. doi:10.1007/s00283-024-10358-x'
apa: 'Brunck, F. R., & Kwan, M. A. (2025). Books, Hallways, and social butterflies:
A note on sliding block puzzles. Mathematical Intelligencer. Springer Nature.
https://doi.org/10.1007/s00283-024-10358-x'
chicago: 'Brunck, Florestan R, and Matthew Alan Kwan. “Books, Hallways, and Social
Butterflies: A Note on Sliding Block Puzzles.” Mathematical Intelligencer.
Springer Nature, 2025. https://doi.org/10.1007/s00283-024-10358-x.'
ieee: 'F. R. Brunck and M. A. Kwan, “Books, Hallways, and social butterflies: A
note on sliding block puzzles,” Mathematical Intelligencer, vol. 47. Springer
Nature, pp. 52–65, 2025.'
ista: 'Brunck FR, Kwan MA. 2025. Books, Hallways, and social butterflies: A note
on sliding block puzzles. Mathematical Intelligencer. 47, 52–65.'
mla: 'Brunck, Florestan R., and Matthew Alan Kwan. “Books, Hallways, and Social
Butterflies: A Note on Sliding Block Puzzles.” Mathematical Intelligencer,
vol. 47, Springer Nature, 2025, pp. 52–65, doi:10.1007/s00283-024-10358-x.'
short: F.R. Brunck, M.A. Kwan, Mathematical Intelligencer 47 (2025) 52–65.
date_created: 2024-09-29T22:01:38Z
date_published: 2025-03-01T00:00:00Z
date_updated: 2025-05-19T14:00:09Z
day: '01'
ddc:
- '510'
department:
- _id: UlWa
- _id: MaKw
doi: 10.1007/s00283-024-10358-x
external_id:
arxiv:
- '2303.09459'
isi:
- '001318056000001'
file:
- access_level: open_access
checksum: c932ebe45c460d4a73f5b2dcca643db1
content_type: application/pdf
creator: dernst
date_created: 2025-04-08T11:17:45Z
date_updated: 2025-04-08T11:17:45Z
file_id: '19530'
file_name: 2025_MathIntelligencer_Brunck.pdf
file_size: 1760643
relation: main_file
success: 1
file_date_updated: 2025-04-08T11:17:45Z
has_accepted_license: '1'
intvolume: ' 47'
isi: 1
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
page: 52-65
publication: Mathematical Intelligencer
publication_identifier:
issn:
- 0343-6993
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Books, Hallways, and social butterflies: A note on sliding block puzzles'
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 47
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18169'
abstract:
- lang: eng
text: "As the complexity and criticality of software increase every year, so does
the importance of runtime monitoring. Third-party and best-effort monitoring are
especially valuable, yet under-explored areas of runtime monitoring. In this context,
third-party monitoring means monitoring with a limited knowledge of the monitored
software (as it has been developed by a third party). Best-effort monitoring keeps
pace with the monitored software at the cost of possibly imprecise verdicts when
keeping up with the monitored software would not be feasible. Most existing monitoring
frameworks do not support the combination of third-party and best-effort monitoring
because they either require the full access to the monitored code or the ability
to process all observable events, or both.\r\nWe present a middleware framework,
Vamos, for the runtime monitoring of software. Vamos is explicitly designed to
support third-party and best-effort scenarios. The design goals of Vamos are (i)
efficiency (tracing events with low overhead), (ii) flexibility (the ability to
monitor a variety of different event channels, and to connect to a wide range
of monitors), and (iii) ease-of-use. To achieve its goals, Vamos combines aspects
of event broker and event recognition systems with aspects of stream processing
systems.\r\nWe implemented a prototype toolchain for Vamos and conducted a set
of experiments demonstrating the usability of the scheme. The results indicate
that Vamos enables writing useful yet efficient monitors, and simplifies key aspects
of setting up a monitoring system from scratch."
acknowledgement: This work was supported in part by the ERC-2020-AdG 101020093. The
authors would like to thank the STTT reviewers for their valuable feedback and suggestions.
article_number: '103212'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Marek
full_name: Chalupa, Marek
id: 87e34708-d6c6-11ec-9f5b-9391e7be2463
last_name: Chalupa
- first_name: Fabian
full_name: Mühlböck, Fabian
id: 6395C5F6-89DF-11E9-9C97-6BDFE5697425
last_name: Mühlböck
orcid: 0000-0003-1548-0177
- first_name: Stefanie
full_name: Muroya Lei, Stefanie
id: a376de31-8972-11ed-ae7b-d0251c13c8ff
last_name: Muroya Lei
- first_name: Thomas A
full_name: Henzinger, Thomas A
id: 40876CD8-F248-11E8-B48F-1D18A9856A87
last_name: Henzinger
orcid: 0000-0002-2985-7724
citation:
ama: 'Chalupa M, Mühlböck F, Muroya Lei S, Henzinger TA. VAMOS: Middleware for best-effort
third-party monitoring. Science of Computer Programming. 2025;240(2). doi:10.1016/j.scico.2024.103212'
apa: 'Chalupa, M., Mühlböck, F., Muroya Lei, S., & Henzinger, T. A. (2025).
VAMOS: Middleware for best-effort third-party monitoring. Science of Computer
Programming. Elsevier. https://doi.org/10.1016/j.scico.2024.103212'
chicago: 'Chalupa, Marek, Fabian Mühlböck, Stefanie Muroya Lei, and Thomas A Henzinger.
“VAMOS: Middleware for Best-Effort Third-Party Monitoring.” Science of Computer
Programming. Elsevier, 2025. https://doi.org/10.1016/j.scico.2024.103212.'
ieee: 'M. Chalupa, F. Mühlböck, S. Muroya Lei, and T. A. Henzinger, “VAMOS: Middleware
for best-effort third-party monitoring,” Science of Computer Programming,
vol. 240, no. 2. Elsevier, 2025.'
ista: 'Chalupa M, Mühlböck F, Muroya Lei S, Henzinger TA. 2025. VAMOS: Middleware
for best-effort third-party monitoring. Science of Computer Programming. 240(2),
103212.'
mla: 'Chalupa, Marek, et al. “VAMOS: Middleware for Best-Effort Third-Party Monitoring.”
Science of Computer Programming, vol. 240, no. 2, 103212, Elsevier, 2025,
doi:10.1016/j.scico.2024.103212.'
short: M. Chalupa, F. Mühlböck, S. Muroya Lei, T.A. Henzinger, Science of Computer
Programming 240 (2025).
corr_author: '1'
date_created: 2024-10-06T22:01:10Z
date_published: 2025-02-01T00:00:00Z
date_updated: 2025-09-09T12:25:29Z
day: '01'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.1016/j.scico.2024.103212
ec_funded: 1
external_id:
isi:
- '001327852600001'
file:
- access_level: open_access
checksum: cd93c0c356e479ffccfbe8499b6ba8e2
content_type: application/pdf
creator: dernst
date_created: 2025-01-13T09:02:47Z
date_updated: 2025-01-13T09:02:47Z
file_id: '18831'
file_name: 2024_ScienceCompProg_Chalupa.pdf
file_size: 1173677
relation: main_file
success: 1
file_date_updated: 2025-01-13T09:02:47Z
has_accepted_license: '1'
intvolume: ' 240'
isi: 1
issue: '2'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
call_identifier: H2020
grant_number: '101020093'
name: Vigilant Algorithmic Monitoring of Software
publication: Science of Computer Programming
publication_identifier:
issn:
- 0167-6423
publication_status: published
publisher: Elsevier
quality_controlled: '1'
related_material:
record:
- id: '12856'
relation: earlier_version
status: public
scopus_import: '1'
status: public
title: 'VAMOS: Middleware for best-effort third-party monitoring'
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 240
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18170'
abstract:
- lang: eng
text: 'This study presents a graphene field-effect transistor (gFET) biosensor with
dual detection capabilities for SARS-CoV-2: one RNA detection assay to confirm
viral positivity and the other for nucleocapsid (N-)protein detection as a proxy
for infectiousness of the patient. This technology can be rapidly adapted to emerging
infectious diseases, making an essential tool to contain future pandemics. To
detect viral RNA, the highly conserved E-gene of the virus was targeted, allowing
for the determination of SARS-CoV-2 presence or absence using nasopharyngeal swab
samples. For N-protein detection, specific antibodies were used. Tested on 213
clinical nasopharyngeal samples, the gFET biosensor showed good correlation with
RT-PCR cycle threshold values, proving its high sensitivity in detecting SARS-CoV-2
RNA. Specificity was confirmed using 21 pre-pandemic samples positive for other
respiratory viruses. The gFET biosensor had a limit of detection (LOD) for N-protein
of 0.9 pM, establishing a foundation for the development of a sensitive tool for
monitoring active viral infection. Results of gFET based N-protein detection corresponded
to the results of virus culture in all 16 available clinical samples and thus
it also proved its capability to serve as a proxy for infectivity. Overall, these
findings support the potential of the gFET biosensor as a point-of-care device
for rapid diagnosis of SARS-CoV-2 infection and indirect assessment of infectiousness
in patients, providing additional information for clinical and public health decision-making.'
acknowledgement: 'This research was funded in whole by the Austrian Science Fund (FWF)
[P 35103-B, Grant-DOI: 10.55776/P35103]. For open access purposes, the author has
applied a CC BY public copyright license to any author-accepted manuscript version
arising from this submission. We would like to thank Olfert Landt for advice on
ssDNA probe design; Rui Qiang Chen, Jennifer Stock, and Christine Wukotitsch for
their excellent support with ONT sequencing; Christoph Köppl and Andreas Fischer
for excellent support in recombinant N protein expression and purification; and
the whole team at the division of clinical virology for their support with standard
diagnostics.'
article_number: '116807'
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Anna Nele
full_name: Herdina, Anna Nele
last_name: Herdina
- first_name: Anil
full_name: Bozdogan, Anil
last_name: Bozdogan
- first_name: Patrik
full_name: Aspermair, Patrik
last_name: Aspermair
- first_name: Jakub
full_name: Dostalek, Jakub
last_name: Dostalek
- first_name: Miriam
full_name: Klausberger, Miriam
last_name: Klausberger
- first_name: Nico
full_name: Lingg, Nico
last_name: Lingg
- first_name: Monika
full_name: Cserjan-Puschmann, Monika
last_name: Cserjan-Puschmann
- first_name: Patricia Pereira
full_name: Aguilar, Patricia Pereira
last_name: Aguilar
- first_name: Simone
full_name: Auer, Simone
last_name: Auer
- first_name: Halil
full_name: Demirtas, Halil
last_name: Demirtas
- first_name: Jakob
full_name: Andersson, Jakob
id: 3a5f4167-9bd9-11ed-bd12-a1446d38776f
last_name: Andersson
- first_name: Felix
full_name: Lötsch, Felix
last_name: Lötsch
- first_name: Barbara
full_name: Holzer, Barbara
last_name: Holzer
- first_name: Adi
full_name: Steinrigl, Adi
last_name: Steinrigl
- first_name: Florian
full_name: Thalhammer, Florian
last_name: Thalhammer
- first_name: Julia
full_name: Schellnegger, Julia
last_name: Schellnegger
- first_name: Monika
full_name: Breuer, Monika
last_name: Breuer
- first_name: Wolfgang
full_name: Knoll, Wolfgang
last_name: Knoll
- first_name: Robert
full_name: Strassl, Robert
last_name: Strassl
citation:
ama: 'Herdina AN, Bozdogan A, Aspermair P, et al. Bridging basic science and applied
diagnostics: Comprehensive viral diagnostics enabled by graphene-based electronic
biosensor technology advancements. Biosensors and Bioelectronics. 2025;267.
doi:10.1016/j.bios.2024.116807'
apa: 'Herdina, A. N., Bozdogan, A., Aspermair, P., Dostalek, J., Klausberger, M.,
Lingg, N., … Strassl, R. (2025). Bridging basic science and applied diagnostics:
Comprehensive viral diagnostics enabled by graphene-based electronic biosensor
technology advancements. Biosensors and Bioelectronics. Elsevier. https://doi.org/10.1016/j.bios.2024.116807'
chicago: 'Herdina, Anna Nele, Anil Bozdogan, Patrik Aspermair, Jakub Dostalek, Miriam
Klausberger, Nico Lingg, Monika Cserjan-Puschmann, et al. “Bridging Basic Science
and Applied Diagnostics: Comprehensive Viral Diagnostics Enabled by Graphene-Based
Electronic Biosensor Technology Advancements.” Biosensors and Bioelectronics.
Elsevier, 2025. https://doi.org/10.1016/j.bios.2024.116807.'
ieee: 'A. N. Herdina et al., “Bridging basic science and applied diagnostics:
Comprehensive viral diagnostics enabled by graphene-based electronic biosensor
technology advancements,” Biosensors and Bioelectronics, vol. 267. Elsevier,
2025.'
ista: 'Herdina AN, Bozdogan A, Aspermair P, Dostalek J, Klausberger M, Lingg N,
Cserjan-Puschmann M, Aguilar PP, Auer S, Demirtas H, Andersson J, Lötsch F, Holzer
B, Steinrigl A, Thalhammer F, Schellnegger J, Breuer M, Knoll W, Strassl R. 2025.
Bridging basic science and applied diagnostics: Comprehensive viral diagnostics
enabled by graphene-based electronic biosensor technology advancements. Biosensors
and Bioelectronics. 267, 116807.'
mla: 'Herdina, Anna Nele, et al. “Bridging Basic Science and Applied Diagnostics:
Comprehensive Viral Diagnostics Enabled by Graphene-Based Electronic Biosensor
Technology Advancements.” Biosensors and Bioelectronics, vol. 267, 116807,
Elsevier, 2025, doi:10.1016/j.bios.2024.116807.'
short: A.N. Herdina, A. Bozdogan, P. Aspermair, J. Dostalek, M. Klausberger, N.
Lingg, M. Cserjan-Puschmann, P.P. Aguilar, S. Auer, H. Demirtas, J. Andersson,
F. Lötsch, B. Holzer, A. Steinrigl, F. Thalhammer, J. Schellnegger, M. Breuer,
W. Knoll, R. Strassl, Biosensors and Bioelectronics 267 (2025).
date_created: 2024-10-06T22:01:11Z
date_published: 2025-01-01T00:00:00Z
date_updated: 2025-02-27T12:34:07Z
day: '01'
ddc:
- '570'
department:
- _id: LeSa
doi: 10.1016/j.bios.2024.116807
external_id:
isi:
- '001328413700001'
pmid:
- '39341071'
file:
- access_level: open_access
checksum: 208ac27dab27af792d198fcb74af8756
content_type: application/pdf
creator: dernst
date_created: 2025-01-13T11:14:32Z
date_updated: 2025-01-13T11:14:32Z
file_id: '18843'
file_name: 2025_BiosensorsBioelectronics_Herdina.pdf
file_size: 4135372
relation: main_file
success: 1
file_date_updated: 2025-01-13T11:14:32Z
has_accepted_license: '1'
intvolume: ' 267'
isi: 1
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
pmid: 1
publication: Biosensors and Bioelectronics
publication_identifier:
eissn:
- 1873-4235
issn:
- 0956-5663
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Bridging basic science and applied diagnostics: Comprehensive viral diagnostics
enabled by graphene-based electronic biosensor technology advancements'
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 267
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '18449'
abstract:
- lang: eng
text: "Research involving human subjects or identifiable human material and data
must be assessed by an ethics committee. The Karl Landsteiner University of Health
Sciences has established a Commission on Ethics and Scientific Integrity to evaluate
medical research conducted by its faculty and students and at its affiliated hospitals.\r\nAll
projects submitted to the Commission on Ethics and Scientific Integrity between
2018 and 2023 were analyzed regarding their major characteristics, the duration
of the evaluation process, and votes issued.\r\nA total of 520 applications were
electronically submitted during the observation period. Most of the studies were
retrospective data analyses in the field of oncology, psychology and surgery.
Most studies included less than 100 volunteers. Of the applications 50% received
a final vote within 5 months, during which several revision rounds took place.
Overall, about 77% of votes issued during the observation period were positive
and 2% were rejections. In 11% files were closed due to withdrawal. In 11% final
votes were pending at the end of the observation period due to requests for revisions.\r\nOur
results emphasize the importance of institutional ethics committees using the
example of the Commission on Ethics and Scientific Integrity at the Karl Landsteiner
University. Such committees fill a gap in evaluating research not covered by Austrian
legal regulations. Continuous development of standards, operating procedures,
and national and international collaborations are required to assess and minimize
risks to trial subjects and to provide a safe and productive environment for research
in human medicine and related fields."
acknowledgement: Open access funding provided by Karl Landsteiner University.
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Sophie
full_name: Schober, Sophie
id: 80b0a0ef-4b9f-11ec-b119-8d9d94c4a1d8
last_name: Schober
- first_name: Sascha
full_name: Klee, Sascha
last_name: Klee
- first_name: Franz
full_name: Trautinger, Franz
last_name: Trautinger
citation:
ama: 'Schober S, Klee S, Trautinger F. The role of institutional ethics committees
in Austria: Report of the Commission on Ethics and Scientific Integrity of the
Karl Landsteiner University of Health Sciences 2018–2023. Wiener Klinische
Wochenschrift. 2025;137:432-437. doi:10.1007/s00508-024-02462-x'
apa: 'Schober, S., Klee, S., & Trautinger, F. (2025). The role of institutional
ethics committees in Austria: Report of the Commission on Ethics and Scientific
Integrity of the Karl Landsteiner University of Health Sciences 2018–2023. Wiener
Klinische Wochenschrift. Springer Nature. https://doi.org/10.1007/s00508-024-02462-x'
chicago: 'Schober, Sophie, Sascha Klee, and Franz Trautinger. “The Role of Institutional
Ethics Committees in Austria: Report of the Commission on Ethics and Scientific
Integrity of the Karl Landsteiner University of Health Sciences 2018–2023.” Wiener
Klinische Wochenschrift. Springer Nature, 2025. https://doi.org/10.1007/s00508-024-02462-x.'
ieee: 'S. Schober, S. Klee, and F. Trautinger, “The role of institutional ethics
committees in Austria: Report of the Commission on Ethics and Scientific Integrity
of the Karl Landsteiner University of Health Sciences 2018–2023,” Wiener Klinische
Wochenschrift, vol. 137. Springer Nature, pp. 432–437, 2025.'
ista: 'Schober S, Klee S, Trautinger F. 2025. The role of institutional ethics committees
in Austria: Report of the Commission on Ethics and Scientific Integrity of the
Karl Landsteiner University of Health Sciences 2018–2023. Wiener Klinische Wochenschrift.
137, 432–437.'
mla: 'Schober, Sophie, et al. “The Role of Institutional Ethics Committees in Austria:
Report of the Commission on Ethics and Scientific Integrity of the Karl Landsteiner
University of Health Sciences 2018–2023.” Wiener Klinische Wochenschrift,
vol. 137, Springer Nature, 2025, pp. 432–37, doi:10.1007/s00508-024-02462-x.'
short: S. Schober, S. Klee, F. Trautinger, Wiener Klinische Wochenschrift 137 (2025)
432–437.
corr_author: '1'
date_created: 2024-10-20T22:02:07Z
date_published: 2025-07-01T00:00:00Z
date_updated: 2025-12-30T06:55:59Z
day: '01'
ddc:
- '570'
department:
- _id: PreCl
doi: 10.1007/s00508-024-02462-x
external_id:
isi:
- '001329812000001'
file:
- access_level: open_access
checksum: 321be8a584117feaea9f3feaa28caabd
content_type: application/pdf
creator: dernst
date_created: 2025-12-30T06:54:03Z
date_updated: 2025-12-30T06:54:03Z
file_id: '20880'
file_name: 2025_WrKlinischeWochenschrift_Schober.pdf
file_size: 580791
relation: main_file
success: 1
file_date_updated: 2025-12-30T06:54:03Z
has_accepted_license: '1'
intvolume: ' 137'
isi: 1
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 432-437
publication: Wiener Klinische Wochenschrift
publication_identifier:
eissn:
- 1613-7671
issn:
- 0043-5325
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The role of institutional ethics committees in Austria: Report of the Commission
on Ethics and Scientific Integrity of the Karl Landsteiner University of Health
Sciences 2018–2023'
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 137
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18478'
abstract:
- lang: eng
text: For a given graph G=(V,E), we define its \emph{nth subdivision} as the graph
obtained from G by replacing every edge by a path of length n. We also define
the \emph{mth power} of G as the graph on vertex set V where we connect every
pair of vertices at distance at most m in G. In this paper, we study the chromatic
number of powers of subdivisions of graphs and resolve the case m=n asymptotically.
In particular, our result confirms a conjecture of Mozafari-Nia and Iradmusa in
the case m=n=3 in a strong sense.
acknowledgement: "This work was initiated at the annual workshop of the Combinatorics
and Graph Theory group of Freie Universität Berlin in Wilhelmsaue in September 2023.
The authors would like to thank the institution for enabling this research. Finally,
the fourth author would like to thank Tibor Szabó and the Combinatorics and Graph
Theory group at Freie Universität Berlin for their hospitality during the research
visit. Additionally, we thank Moharram Iradmusa for bringing the papers [5], [7]
to our attention. Finally, we thank the anonymous referees for their suggestions
on the manuscript, which have improved the quality of the document.\r\nM.A.: This
project has received funding from the European Union’s Horizon 2020 research and
innovation programme under the Marie Skłodowska-Curie grant agreement No 101034413
.\r\nS.B.: The research leading to these results was supported by EPSRC, UK, grant
no. EP/V048287/1. There are no additional data beyond that contained within the
main manuscript.\r\nS.R.: Funded by the Deutsche Forschungsgemeinschaft (DFG, German
Research Foundation) under Germany’s Excellence Strategy – The Berlin Mathematics
Research Center MATH+ (EXC-2046/1, project ID: 390685689).\r\nJ.R. acknowledges
the support of the Grant PID2020-113082GB-I00 funded by MICIU/AEI/10.13039/501100011033,
Spain, and the Severo Ochoa and María de Maeztu Program for Centers and Units of
Excellence in R&D, Spain (CEX2020-001084-M)."
article_processing_charge: Yes (in subscription journal)
article_type: original
arxiv: 1
author:
- first_name: Michael
full_name: Anastos, Michael
id: 0b2a4358-bb35-11ec-b7b9-e3279b593dbb
last_name: Anastos
- first_name: Simona
full_name: Boyadzhiyska, Simona
last_name: Boyadzhiyska
- first_name: Silas
full_name: Rathke, Silas
last_name: Rathke
- first_name: Juanjo
full_name: Rué, Juanjo
last_name: Rué
citation:
ama: Anastos M, Boyadzhiyska S, Rathke S, Rué J. On the chromatic number of powers
of subdivisions of graphs. Discrete Applied Mathematics. 2025;360:506-511.
doi:10.1016/j.dam.2024.10.002
apa: Anastos, M., Boyadzhiyska, S., Rathke, S., & Rué, J. (2025). On the chromatic
number of powers of subdivisions of graphs. Discrete Applied Mathematics.
Elsevier. https://doi.org/10.1016/j.dam.2024.10.002
chicago: Anastos, Michael, Simona Boyadzhiyska, Silas Rathke, and Juanjo Rué. “On
the Chromatic Number of Powers of Subdivisions of Graphs.” Discrete Applied
Mathematics. Elsevier, 2025. https://doi.org/10.1016/j.dam.2024.10.002.
ieee: M. Anastos, S. Boyadzhiyska, S. Rathke, and J. Rué, “On the chromatic number
of powers of subdivisions of graphs,” Discrete Applied Mathematics, vol.
360. Elsevier, pp. 506–511, 2025.
ista: Anastos M, Boyadzhiyska S, Rathke S, Rué J. 2025. On the chromatic number
of powers of subdivisions of graphs. Discrete Applied Mathematics. 360, 506–511.
mla: Anastos, Michael, et al. “On the Chromatic Number of Powers of Subdivisions
of Graphs.” Discrete Applied Mathematics, vol. 360, Elsevier, 2025, pp.
506–11, doi:10.1016/j.dam.2024.10.002.
short: M. Anastos, S. Boyadzhiyska, S. Rathke, J. Rué, Discrete Applied Mathematics
360 (2025) 506–511.
corr_author: '1'
date_created: 2024-10-27T23:01:44Z
date_published: 2025-01-15T00:00:00Z
date_updated: 2025-04-14T07:54:56Z
day: '15'
ddc:
- '510'
department:
- _id: MaKw
doi: 10.1016/j.dam.2024.10.002
ec_funded: 1
external_id:
arxiv:
- '2404.05542'
isi:
- '001343647000001'
file:
- access_level: open_access
checksum: bd20a13e56b3ea01daf5e7aca5247c60
content_type: application/pdf
creator: dernst
date_created: 2025-01-13T09:25:59Z
date_updated: 2025-01-13T09:25:59Z
file_id: '18836'
file_name: 2025_DiscreteApplMath_Anastos.pdf
file_size: 441060
relation: main_file
success: 1
file_date_updated: 2025-01-13T09:25:59Z
has_accepted_license: '1'
intvolume: ' 360'
isi: 1
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
page: 506-511
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
call_identifier: H2020
grant_number: '101034413'
name: 'IST-BRIDGE: International postdoctoral program'
publication: Discrete Applied Mathematics
publication_identifier:
issn:
- 0166-218X
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: On the chromatic number of powers of subdivisions of graphs
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 360
year: '2025'
...
---
OA_type: closed access
_id: '18529'
abstract:
- lang: eng
text: Temporal networks are obtained from time-dependent interactions among individuals,
whereas the interactions can be emails, phone calls, face-to-face meetings, or
work collaboration. In this article, a temporal game framework is established,
in which interactions among rational individuals are embedded into two-player
games in a time-dependent manner. This allows studying the time-dependent complexity
and variability of interactions, and the way they affect prosocial behaviors.
Based on this simple mathematical model, it is found that the level of cooperation
is promoted when the time of collaboration is equally limited for every individual.
This observation is confirmed by a series of systematic human experiments on over
1,400 subjects, forming a foundation for comprehensively describing human temporal
interactions in collaboration. The research results reveal an important incentive
for human cooperation, leading to a better understanding of a fascinating aspect
of human nature in society.
article_processing_charge: No
article_type: original
author:
- first_name: Yichao
full_name: Zhang, Yichao
last_name: Zhang
- first_name: Jiasheng
full_name: Wang, Jiasheng
last_name: Wang
- first_name: Guanghui
full_name: Wen, Guanghui
last_name: Wen
- first_name: Jihong
full_name: Guan, Jihong
last_name: Guan
- first_name: Shuigeng
full_name: Zhou, Shuigeng
last_name: Zhou
- first_name: Guanrong
full_name: Chen, Guanrong
last_name: Chen
- first_name: Krishnendu
full_name: Chatterjee, Krishnendu
id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
last_name: Chatterjee
orcid: 0000-0002-4561-241X
- first_name: Matjaz
full_name: Perc, Matjaz
last_name: Perc
citation:
ama: Zhang Y, Wang J, Wen G, et al. Limitation of time promotes cooperation in structured
collaboration systems. IEEE Transactions on Network Science and Engineering.
2025;12(1):4-12. doi:10.1109/TNSE.2024.3481434
apa: Zhang, Y., Wang, J., Wen, G., Guan, J., Zhou, S., Chen, G., … Perc, M. (2025).
Limitation of time promotes cooperation in structured collaboration systems. IEEE
Transactions on Network Science and Engineering. IEEE. https://doi.org/10.1109/TNSE.2024.3481434
chicago: Zhang, Yichao, Jiasheng Wang, Guanghui Wen, Jihong Guan, Shuigeng Zhou,
Guanrong Chen, Krishnendu Chatterjee, and Matjaz Perc. “Limitation of Time Promotes
Cooperation in Structured Collaboration Systems.” IEEE Transactions on Network
Science and Engineering. IEEE, 2025. https://doi.org/10.1109/TNSE.2024.3481434.
ieee: Y. Zhang et al., “Limitation of time promotes cooperation in structured
collaboration systems,” IEEE Transactions on Network Science and Engineering,
vol. 12, no. 1. IEEE, pp. 4–12, 2025.
ista: Zhang Y, Wang J, Wen G, Guan J, Zhou S, Chen G, Chatterjee K, Perc M. 2025.
Limitation of time promotes cooperation in structured collaboration systems. IEEE
Transactions on Network Science and Engineering. 12(1), 4–12.
mla: Zhang, Yichao, et al. “Limitation of Time Promotes Cooperation in Structured
Collaboration Systems.” IEEE Transactions on Network Science and Engineering,
vol. 12, no. 1, IEEE, 2025, pp. 4–12, doi:10.1109/TNSE.2024.3481434.
short: Y. Zhang, J. Wang, G. Wen, J. Guan, S. Zhou, G. Chen, K. Chatterjee, M. Perc,
IEEE Transactions on Network Science and Engineering 12 (2025) 4–12.
date_created: 2024-11-10T23:02:00Z
date_published: 2025-01-01T00:00:00Z
date_updated: 2025-02-27T12:35:48Z
day: '01'
department:
- _id: KrCh
doi: 10.1109/TNSE.2024.3481434
external_id:
isi:
- '001385382200040'
intvolume: ' 12'
isi: 1
issue: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 4-12
publication: IEEE Transactions on Network Science and Engineering
publication_identifier:
eissn:
- 2327-4697
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Limitation of time promotes cooperation in structured collaboration systems
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 12
year: '2025'
...
---
OA_type: closed access
_id: '18558'
abstract:
- lang: eng
text: The current investigation presents a facile and cost-effective sol-gel approach
for the synthesis of phase-pure multiferroic bismuth ferrite (BiFeO3) nanoparticles
(BFO NPs) by using propylene glycol as a complexing agent, intended for use as
a photocatalyst to efficiently degrade organic dyes in aqueous solutions under
natural sunlight. Characterization techniques, including thermogravimetric analysis
(TGA), Fourier transform infrared spectroscopy (FT-IR), and X-ray diffraction
(XRD), elucidated a plausible reaction pathway for the formation of phase-pure
BFO NPs. Rietveld refinement of the XRD data, in conjunction with transmission
electron microscopy (TEM) and Raman spectroscopy, confirmed the synthesis of single-phase
BFO NPs at 400 °C, displaying a space group of R3c and an average crystallite
size of 25 nm. UV–visible diffuse reflectance spectroscopy revealed an absorption
cut-off wavelength near 590 nm, corresponding to a band gap of 2.08 eV, indicating
the capability of BFO NPs to absorb visible light within the 400–590 nm range.
BFO NPs have shown efficient and rapid photocatalytic degradation of methylene
blue (MB) in acidic, neutral, and basic pH conditions under natural sunlight.
This is attributed to the intrinsic ferroelectric and ferromagnetic ordering present
in synthesized BFO NPs which facilitates the separation and migration of photoinduced
charges through band bending phenomena at the interface.
acknowledgement: "Simant Kumar Srivastav greatly acknowledges the University Grant
Commission (UGC), New Delhi, India for providing BSR start-up grant to carry out
this research work.\r\nThis research was supported by start-up grant of the University
Grant Commission (UGC), New Delhi, India through project no F-30-500/2019 (BSR)."
article_processing_charge: No
article_type: original
author:
- first_name: Madhu
full_name: Verma, Madhu
last_name: Verma
- first_name: Ajay
full_name: Kumar, Ajay
last_name: Kumar
- first_name: Vijay Kumar
full_name: Thakur, Vijay Kumar
last_name: Thakur
- first_name: Akanksha
full_name: Maurya, Akanksha
last_name: Maurya
- first_name: Sachin
full_name: Kumar, Sachin
last_name: Kumar
- first_name: Saurabh
full_name: Singh, Saurabh
id: 12d625da-9cb3-11ed-9667-af09d37d3f0a
last_name: Singh
orcid: 0000-0003-2209-5269
- first_name: Simant Kumar
full_name: Srivastav, Simant Kumar
last_name: Srivastav
citation:
ama: Verma M, Kumar A, Thakur VK, et al. Efficient and rapid sunlight-driven photocatalytic
degradation of methylene blue dye using multiferroic BiFeO3 nanoparticles. Journal
of Sol-Gel Science and Technology. 2025;113:356-373. doi:10.1007/s10971-024-06607-2
apa: Verma, M., Kumar, A., Thakur, V. K., Maurya, A., Kumar, S., Singh, S., &
Srivastav, S. K. (2025). Efficient and rapid sunlight-driven photocatalytic degradation
of methylene blue dye using multiferroic BiFeO3 nanoparticles. Journal of Sol-Gel
Science and Technology. Springer Nature. https://doi.org/10.1007/s10971-024-06607-2
chicago: Verma, Madhu, Ajay Kumar, Vijay Kumar Thakur, Akanksha Maurya, Sachin Kumar,
Saurabh Singh, and Simant Kumar Srivastav. “Efficient and Rapid Sunlight-Driven
Photocatalytic Degradation of Methylene Blue Dye Using Multiferroic BiFeO3 Nanoparticles.”
Journal of Sol-Gel Science and Technology. Springer Nature, 2025. https://doi.org/10.1007/s10971-024-06607-2.
ieee: M. Verma et al., “Efficient and rapid sunlight-driven photocatalytic
degradation of methylene blue dye using multiferroic BiFeO3 nanoparticles,” Journal
of Sol-Gel Science and Technology, vol. 113. Springer Nature, pp. 356–373,
2025.
ista: Verma M, Kumar A, Thakur VK, Maurya A, Kumar S, Singh S, Srivastav SK. 2025.
Efficient and rapid sunlight-driven photocatalytic degradation of methylene blue
dye using multiferroic BiFeO3 nanoparticles. Journal of Sol-Gel Science and Technology.
113, 356–373.
mla: Verma, Madhu, et al. “Efficient and Rapid Sunlight-Driven Photocatalytic Degradation
of Methylene Blue Dye Using Multiferroic BiFeO3 Nanoparticles.” Journal of
Sol-Gel Science and Technology, vol. 113, Springer Nature, 2025, pp. 356–73,
doi:10.1007/s10971-024-06607-2.
short: M. Verma, A. Kumar, V.K. Thakur, A. Maurya, S. Kumar, S. Singh, S.K. Srivastav,
Journal of Sol-Gel Science and Technology 113 (2025) 356–373.
date_created: 2024-11-17T23:01:47Z
date_published: 2025-02-01T00:00:00Z
date_updated: 2025-05-19T14:00:43Z
day: '01'
department:
- _id: MaIb
doi: 10.1007/s10971-024-06607-2
external_id:
isi:
- '001348590700001'
intvolume: ' 113'
isi: 1
language:
- iso: eng
month: '02'
oa_version: None
page: 356-373
publication: Journal of Sol-Gel Science and Technology
publication_identifier:
eissn:
- 1573-4846
issn:
- 0928-0707
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Efficient and rapid sunlight-driven photocatalytic degradation of methylene
blue dye using multiferroic BiFeO3 nanoparticles
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 113
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18580'
abstract:
- lang: eng
text: Motivated by the study of recurrent orbits and dynamics within a Morse set
of a Morse decomposition we introduce the concept of Morse predecomposition of
an isolated invariant set within the setting of both combinatorial and classical
dynamical systems. While Morse decomposition summarizes solely the gradient part
of a dynamical system, the developed generalization extends to the recurrent component
as well. In particular, a chain recurrent set, which is indecomposable in terms
of Morse decomposition, can be represented more finely in the Morse predecomposition
framework. This generalization is achieved by forgoing the poset structure inherent
to Morse decomposition and relaxing the notion of connection between Morse sets
(elements of Morse decomposition) in favor of what we term ’links’. We prove that
a Morse decomposition is a special case of Morse predecomposition indexed by a
poset. Additionally, we show how a Morse predecomposition may be condensed back
to retrieve a Morse decomposition.
acknowledgement: 'M.L. acknowledge support by the Dioscuri program initiated by the
Max Planck Society, jointly managed with the National Science Centre (Poland), and
mutually funded by the Polish Ministry of Science and Higher Education and the German
Federal Ministry of Education and Research. M.L. also acknowledges that this project
has received funding from the European Union’s Horizon 2020 research and innovation
programme under the Marie Skłodowska-Curie Grant Agreement No. 101034413. Research
of M.M. is partially supported by the Polish National Science Center under Opus
Grant No. 2019/35/B/ST1/00874. The work of K.M. was partially supported by the National
Science Foundation under awards DMS-1839294 and HDR TRIPODS award CCF-1934924, DARPA
contract HR0011-16-2-0033, National Institutes of Health award R01 GM126555, Air
Force Office of Scientific Research under award numbers FA9550-23-1-0011, AWD00010853-MOD002
and MURI FA9550-23-1-0400. K.M. was also supported by a grant from the Simons Foundation.
Open access funding provided by Institute of Science and Technology (IST Austria). '
article_number: '5'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Michał
full_name: Lipiński, Michał
id: dfffb474-4317-11ee-8f5c-fe3fc95a425e
last_name: Lipiński
orcid: 0000-0001-9789-9750
- first_name: Konstantin
full_name: Mischaikow, Konstantin
last_name: Mischaikow
- first_name: Marian
full_name: Mrozek, Marian
last_name: Mrozek
citation:
ama: Lipiński M, Mischaikow K, Mrozek M. Morse predecomposition of an invariant
set. Qualitative Theory of Dynamical Systems. 2025;24(1). doi:10.1007/s12346-024-01144-3
apa: Lipiński, M., Mischaikow, K., & Mrozek, M. (2025). Morse predecomposition
of an invariant set. Qualitative Theory of Dynamical Systems. Springer
Nature. https://doi.org/10.1007/s12346-024-01144-3
chicago: Lipiński, Michał, Konstantin Mischaikow, and Marian Mrozek. “Morse Predecomposition
of an Invariant Set.” Qualitative Theory of Dynamical Systems. Springer
Nature, 2025. https://doi.org/10.1007/s12346-024-01144-3.
ieee: M. Lipiński, K. Mischaikow, and M. Mrozek, “Morse predecomposition of an invariant
set,” Qualitative Theory of Dynamical Systems, vol. 24, no. 1. Springer
Nature, 2025.
ista: Lipiński M, Mischaikow K, Mrozek M. 2025. Morse predecomposition of an invariant
set. Qualitative Theory of Dynamical Systems. 24(1), 5.
mla: Lipiński, Michał, et al. “Morse Predecomposition of an Invariant Set.” Qualitative
Theory of Dynamical Systems, vol. 24, no. 1, 5, Springer Nature, 2025, doi:10.1007/s12346-024-01144-3.
short: M. Lipiński, K. Mischaikow, M. Mrozek, Qualitative Theory of Dynamical Systems
24 (2025).
corr_author: '1'
date_created: 2024-11-24T23:01:47Z
date_published: 2025-02-01T00:00:00Z
date_updated: 2025-04-14T07:54:56Z
day: '01'
ddc:
- '514'
- '510'
department:
- _id: UlWa
doi: 10.1007/s12346-024-01144-3
ec_funded: 1
external_id:
arxiv:
- '2312.08013'
isi:
- '001356000500005'
file:
- access_level: open_access
checksum: 73309a57cc798d696caa57b6aa1467d8
content_type: application/pdf
creator: mlipinsk
date_created: 2024-11-28T06:52:38Z
date_updated: 2024-11-28T06:52:38Z
file_id: '18595'
file_name: 2025_predecomposition.pdf
file_size: 1483668
relation: main_file
success: 1
file_date_updated: 2024-11-28T06:52:38Z
has_accepted_license: '1'
intvolume: ' 24'
isi: 1
issue: '1'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
call_identifier: H2020
grant_number: '101034413'
name: 'IST-BRIDGE: International postdoctoral program'
publication: Qualitative Theory of Dynamical Systems
publication_identifier:
eissn:
- 1662-3592
issn:
- 1575-5460
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Morse predecomposition of an invariant set
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 24
year: '2025'
...