---
_id: '12578'
abstract:
- lang: eng
  text: "Currently, about 12 %–13 % of High Mountain Asia’s glacier area is debris-covered,
    which alters its surface mass balance. However, in regional-scale modelling approaches,
    debris-covered glaciers are typically treated as clean-ice glaciers, leading to
    a bias when modelling their future evolution. Here, we present a new approach
    for modelling debris area and thickness evolution, applicable from single glaciers
    to the global scale. We derive a parameterization and implement it as a module
    into the Global Glacier Evolution Model (GloGEMflow), a combined mass-balance
    ice-flow model. The module is initialized with both glacier-specific observations
    of the debris' spatial distribution and estimates of debris thickness. These data
    sets account for the fact that debris can either enhance or reduce surface melt
    depending on thickness. Our model approach also enables representing the spatiotemporal
    evolution of debris extent and thickness. We calibrate and evaluate the module
    on a selected subset of glaciers and apply GloGEMflow using different climate
    scenarios to project the future evolution of all glaciers in High Mountain Asia
    until 2100. Explicitly accounting for debris cover has only a minor effect on
    the projected mass loss, which is in line with previous projections. Despite this
    small effect, we argue that the improved process representation is of added value
    when aiming at capturing intra-glacier scales, i.e. spatial mass-balance distribution.\r\nDepending
    on the climate scenario, the mean debris-cover fraction is expected to increase,
    while mean debris thickness is projected to show only minor changes, although
    large local thickening is expected. To isolate the influence of explicitly accounting
    for supraglacial debris cover, we re-compute glacier evolution without the debris-cover
    module. We show that glacier geometry, area, volume, and flow velocity evolve
    differently, especially at the level of individual glaciers. This highlights the
    importance of accounting for debris cover and its spatiotemporal evolution when
    projecting future glacier changes."
article_processing_charge: No
article_type: original
author:
- first_name: Loris
  full_name: Compagno, Loris
  last_name: Compagno
- first_name: Matthias
  full_name: Huss, Matthias
  last_name: Huss
- first_name: Evan Stewart
  full_name: Miles, Evan Stewart
  last_name: Miles
- first_name: Michael James
  full_name: McCarthy, Michael James
  last_name: McCarthy
- first_name: Harry
  full_name: Zekollari, Harry
  last_name: Zekollari
- first_name: Amaury
  full_name: Dehecq, Amaury
  last_name: Dehecq
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
- first_name: Daniel
  full_name: Farinotti, Daniel
  last_name: Farinotti
citation:
  ama: 'Compagno L, Huss M, Miles ES, et al. Modelling supraglacial debris-cover evolution
    from the single-glacier to the regional scale: An application to High Mountain
    Asia. <i>The Cryosphere</i>. 2022;16(5):1697-1718. doi:<a href="https://doi.org/10.5194/tc-16-1697-2022">10.5194/tc-16-1697-2022</a>'
  apa: 'Compagno, L., Huss, M., Miles, E. S., McCarthy, M. J., Zekollari, H., Dehecq,
    A., … Farinotti, D. (2022). Modelling supraglacial debris-cover evolution from
    the single-glacier to the regional scale: An application to High Mountain Asia.
    <i>The Cryosphere</i>. Copernicus Publications. <a href="https://doi.org/10.5194/tc-16-1697-2022">https://doi.org/10.5194/tc-16-1697-2022</a>'
  chicago: 'Compagno, Loris, Matthias Huss, Evan Stewart Miles, Michael James McCarthy,
    Harry Zekollari, Amaury Dehecq, Francesca Pellicciotti, and Daniel Farinotti.
    “Modelling Supraglacial Debris-Cover Evolution from the Single-Glacier to the
    Regional Scale: An Application to High Mountain Asia.” <i>The Cryosphere</i>.
    Copernicus Publications, 2022. <a href="https://doi.org/10.5194/tc-16-1697-2022">https://doi.org/10.5194/tc-16-1697-2022</a>.'
  ieee: 'L. Compagno <i>et al.</i>, “Modelling supraglacial debris-cover evolution
    from the single-glacier to the regional scale: An application to High Mountain
    Asia,” <i>The Cryosphere</i>, vol. 16, no. 5. Copernicus Publications, pp. 1697–1718,
    2022.'
  ista: 'Compagno L, Huss M, Miles ES, McCarthy MJ, Zekollari H, Dehecq A, Pellicciotti
    F, Farinotti D. 2022. Modelling supraglacial debris-cover evolution from the single-glacier
    to the regional scale: An application to High Mountain Asia. The Cryosphere. 16(5),
    1697–1718.'
  mla: 'Compagno, Loris, et al. “Modelling Supraglacial Debris-Cover Evolution from
    the Single-Glacier to the Regional Scale: An Application to High Mountain Asia.”
    <i>The Cryosphere</i>, vol. 16, no. 5, Copernicus Publications, 2022, pp. 1697–718,
    doi:<a href="https://doi.org/10.5194/tc-16-1697-2022">10.5194/tc-16-1697-2022</a>.'
  short: L. Compagno, M. Huss, E.S. Miles, M.J. McCarthy, H. Zekollari, A. Dehecq,
    F. Pellicciotti, D. Farinotti, The Cryosphere 16 (2022) 1697–1718.
date_created: 2023-02-20T08:10:09Z
date_published: 2022-05-05T00:00:00Z
date_updated: 2023-02-28T13:47:17Z
day: '05'
doi: 10.5194/tc-16-1697-2022
extern: '1'
intvolume: '        16'
issue: '5'
keyword:
- Earth-Surface Processes
- Water Science and Technology
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5194/tc-16-1697-2022
month: '05'
oa: 1
oa_version: Published Version
page: 1697-1718
publication: The Cryosphere
publication_identifier:
  issn:
  - 1994-0424
publication_status: published
publisher: Copernicus Publications
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Modelling supraglacial debris-cover evolution from the single-glacier to the
  regional scale: An application to High Mountain Asia'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 16
year: '2022'
...
---
_id: '12579'
abstract:
- lang: eng
  text: "The Indian and East Asian summer monsoons shape the melt and accumulation
    patterns of glaciers in High Mountain Asia in complex ways due to the interaction
    of persistent cloud cover, large temperature ranges, high atmospheric water content
    and high precipitation rates. Glacier energy- and mass-balance modelling using
    in situ measurements offers insights into the ways in which surface processes
    are shaped by climatic regimes. In this study, we use a full energy- and mass-balance
    model and seven on-glacier automatic weather station datasets from different parts
    of the Central and Eastern Himalaya to investigate how monsoon conditions influence
    the glacier surface energy and mass balance. In particular, we look at how debris-covered
    and debris-free glaciers respond differently to monsoonal conditions.\r\nThe radiation
    budget primarily controls the melt of clean-ice glaciers, but turbulent fluxes
    play an important role in modulating the melt energy on debris-covered glaciers.
    The sensible heat flux decreases during core monsoon, but the latent heat flux
    cools the surface due to evaporation of liquid water. This interplay of radiative
    and turbulent fluxes causes debris-covered glacier melt rates to stay almost constant
    through the different phases of the monsoon. Ice melt under thin debris, on the
    other hand, is amplified by both the dark surface and the turbulent fluxes, which
    intensify melt during monsoon through surface heating and condensation.\r\nPre-monsoon
    snow cover can considerably delay melt onset and have a strong impact on the seasonal
    mass balance. Intermittent monsoon snow cover lowers the melt rates at high elevation.
    This work is fundamental to the understanding of the present and future Himalayan
    cryosphere and water budget, while informing and motivating further glacier- and
    catchment-scale research using process-based models."
article_processing_charge: No
article_type: original
author:
- first_name: Stefan
  full_name: Fugger, Stefan
  last_name: Fugger
- first_name: Catriona L.
  full_name: Fyffe, Catriona L.
  last_name: Fyffe
- first_name: Simone
  full_name: Fatichi, Simone
  last_name: Fatichi
- first_name: Evan
  full_name: Miles, Evan
  last_name: Miles
- first_name: Michael
  full_name: McCarthy, Michael
  last_name: McCarthy
- first_name: Thomas E.
  full_name: Shaw, Thomas E.
  last_name: Shaw
- first_name: Baohong
  full_name: Ding, Baohong
  last_name: Ding
- first_name: Wei
  full_name: Yang, Wei
  last_name: Yang
- first_name: Patrick
  full_name: Wagnon, Patrick
  last_name: Wagnon
- first_name: Walter
  full_name: Immerzeel, Walter
  last_name: Immerzeel
- first_name: Qiao
  full_name: Liu, Qiao
  last_name: Liu
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
citation:
  ama: Fugger S, Fyffe CL, Fatichi S, et al. Understanding monsoon controls on the
    energy and mass balance of glaciers in the Central and Eastern Himalaya. <i>The
    Cryosphere</i>. 2022;16(5):1631-1652. doi:<a href="https://doi.org/10.5194/tc-16-1631-2022">10.5194/tc-16-1631-2022</a>
  apa: Fugger, S., Fyffe, C. L., Fatichi, S., Miles, E., McCarthy, M., Shaw, T. E.,
    … Pellicciotti, F. (2022). Understanding monsoon controls on the energy and mass
    balance of glaciers in the Central and Eastern Himalaya. <i>The Cryosphere</i>.
    Copernicus Publications. <a href="https://doi.org/10.5194/tc-16-1631-2022">https://doi.org/10.5194/tc-16-1631-2022</a>
  chicago: Fugger, Stefan, Catriona L. Fyffe, Simone Fatichi, Evan Miles, Michael
    McCarthy, Thomas E. Shaw, Baohong Ding, et al. “Understanding Monsoon Controls
    on the Energy and Mass Balance of Glaciers in the Central and Eastern Himalaya.”
    <i>The Cryosphere</i>. Copernicus Publications, 2022. <a href="https://doi.org/10.5194/tc-16-1631-2022">https://doi.org/10.5194/tc-16-1631-2022</a>.
  ieee: S. Fugger <i>et al.</i>, “Understanding monsoon controls on the energy and
    mass balance of glaciers in the Central and Eastern Himalaya,” <i>The Cryosphere</i>,
    vol. 16, no. 5. Copernicus Publications, pp. 1631–1652, 2022.
  ista: Fugger S, Fyffe CL, Fatichi S, Miles E, McCarthy M, Shaw TE, Ding B, Yang
    W, Wagnon P, Immerzeel W, Liu Q, Pellicciotti F. 2022. Understanding monsoon controls
    on the energy and mass balance of glaciers in the Central and Eastern Himalaya.
    The Cryosphere. 16(5), 1631–1652.
  mla: Fugger, Stefan, et al. “Understanding Monsoon Controls on the Energy and Mass
    Balance of Glaciers in the Central and Eastern Himalaya.” <i>The Cryosphere</i>,
    vol. 16, no. 5, Copernicus Publications, 2022, pp. 1631–52, doi:<a href="https://doi.org/10.5194/tc-16-1631-2022">10.5194/tc-16-1631-2022</a>.
  short: S. Fugger, C.L. Fyffe, S. Fatichi, E. Miles, M. McCarthy, T.E. Shaw, B. Ding,
    W. Yang, P. Wagnon, W. Immerzeel, Q. Liu, F. Pellicciotti, The Cryosphere 16 (2022)
    1631–1652.
date_created: 2023-02-20T08:10:16Z
date_published: 2022-05-05T00:00:00Z
date_updated: 2023-02-28T13:45:01Z
day: '05'
doi: 10.5194/tc-16-1631-2022
extern: '1'
intvolume: '        16'
issue: '5'
keyword:
- Earth-Surface Processes
- Water Science and Technology
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5194/tc-16-1631-2022
month: '05'
oa: 1
oa_version: Published Version
page: 1631-1652
publication: The Cryosphere
publication_identifier:
  issn:
  - 1994-0424
publication_status: published
publisher: Copernicus Publications
quality_controlled: '1'
scopus_import: '1'
status: public
title: Understanding monsoon controls on the energy and mass balance of glaciers in
  the Central and Eastern Himalaya
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 16
year: '2022'
...
---
_id: '12580'
abstract:
- lang: eng
  text: River systems originating from the Upper Indus Basin (UIB) are dominated by
    runoff from snow and glacier melt and summer monsoonal rainfall. These water resources
    are highly stressed as huge populations of people living in this region depend
    on them, including for agriculture, domestic use, and energy production. Projections
    suggest that the UIB region will be affected by considerable (yet poorly quantified)
    changes to the seasonality and composition of runoff in the future, which are
    likely to have considerable impacts on these supplies. Given how directly and
    indirectly communities and ecosystems are dependent on these resources and the
    growing pressure on them due to ever-increasing demands, the impacts of climate
    change pose considerable adaptation challenges. The strong linkages between hydroclimate,
    cryosphere, water resources, and human activities within the UIB suggest that
    a multi- and inter-disciplinary research approach integrating the social and natural/environmental
    sciences is critical for successful adaptation to ongoing and future hydrological
    and climate change. Here we use a horizon scanning technique to identify the Top
    100 questions related to the most pressing knowledge gaps and research priorities
    in social and natural sciences on climate change and water in the UIB. These questions
    are on the margins of current thinking and investigation and are clustered into
    14 themes, covering three overarching topics of “governance, policy, and sustainable
    solutions”, “socioeconomic processes and livelihoods”, and “integrated Earth System
    processes”. Raising awareness of these cutting-edge knowledge gaps and opportunities
    will hopefully encourage researchers, funding bodies, practitioners, and policy
    makers to address them.
article_number: e2021EF002619
article_processing_charge: No
article_type: original
author:
- first_name: Andrew
  full_name: Orr, Andrew
  last_name: Orr
- first_name: Bashir
  full_name: Ahmad, Bashir
  last_name: Ahmad
- first_name: Undala
  full_name: Alam, Undala
  last_name: Alam
- first_name: ArivudaiNambi
  full_name: Appadurai, ArivudaiNambi
  last_name: Appadurai
- first_name: Zareen P.
  full_name: Bharucha, Zareen P.
  last_name: Bharucha
- first_name: Hester
  full_name: Biemans, Hester
  last_name: Biemans
- first_name: Tobias
  full_name: Bolch, Tobias
  last_name: Bolch
- first_name: Narayan P.
  full_name: Chaulagain, Narayan P.
  last_name: Chaulagain
- first_name: Sanita
  full_name: Dhaubanjar, Sanita
  last_name: Dhaubanjar
- first_name: A. P.
  full_name: Dimri, A. P.
  last_name: Dimri
- first_name: Harry
  full_name: Dixon, Harry
  last_name: Dixon
- first_name: Hayley J.
  full_name: Fowler, Hayley J.
  last_name: Fowler
- first_name: Giovanna
  full_name: Gioli, Giovanna
  last_name: Gioli
- first_name: Sarah J.
  full_name: Halvorson, Sarah J.
  last_name: Halvorson
- first_name: Abid
  full_name: Hussain, Abid
  last_name: Hussain
- first_name: Ghulam
  full_name: Jeelani, Ghulam
  last_name: Jeelani
- first_name: Simi
  full_name: Kamal, Simi
  last_name: Kamal
- first_name: Imran S.
  full_name: Khalid, Imran S.
  last_name: Khalid
- first_name: Shiyin
  full_name: Liu, Shiyin
  last_name: Liu
- first_name: Arthur
  full_name: Lutz, Arthur
  last_name: Lutz
- first_name: Meeta K.
  full_name: Mehra, Meeta K.
  last_name: Mehra
- first_name: Evan
  full_name: Miles, Evan
  last_name: Miles
- first_name: Andrea
  full_name: Momblanch, Andrea
  last_name: Momblanch
- first_name: Veruska
  full_name: Muccione, Veruska
  last_name: Muccione
- first_name: Aditi
  full_name: Mukherji, Aditi
  last_name: Mukherji
- first_name: Daanish
  full_name: Mustafa, Daanish
  last_name: Mustafa
- first_name: Omaid
  full_name: Najmuddin, Omaid
  last_name: Najmuddin
- first_name: Mohammad N.
  full_name: Nasimi, Mohammad N.
  last_name: Nasimi
- first_name: Marcus
  full_name: Nüsser, Marcus
  last_name: Nüsser
- first_name: Vishnu P.
  full_name: Pandey, Vishnu P.
  last_name: Pandey
- first_name: Sitara
  full_name: Parveen, Sitara
  last_name: Parveen
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
- first_name: Carmel
  full_name: Pollino, Carmel
  last_name: Pollino
- first_name: Emily
  full_name: Potter, Emily
  last_name: Potter
- first_name: Mohammad R.
  full_name: Qazizada, Mohammad R.
  last_name: Qazizada
- first_name: Saon
  full_name: Ray, Saon
  last_name: Ray
- first_name: Shakil
  full_name: Romshoo, Shakil
  last_name: Romshoo
- first_name: Syamal K.
  full_name: Sarkar, Syamal K.
  last_name: Sarkar
- first_name: Amiera
  full_name: Sawas, Amiera
  last_name: Sawas
- first_name: Sumit
  full_name: Sen, Sumit
  last_name: Sen
- first_name: Attaullah
  full_name: Shah, Attaullah
  last_name: Shah
- first_name: M. Azeem Ali
  full_name: Shah, M. Azeem Ali
  last_name: Shah
- first_name: Joseph M.
  full_name: Shea, Joseph M.
  last_name: Shea
- first_name: Ali T.
  full_name: Sheikh, Ali T.
  last_name: Sheikh
- first_name: Arun B.
  full_name: Shrestha, Arun B.
  last_name: Shrestha
- first_name: Shresth
  full_name: Tayal, Shresth
  last_name: Tayal
- first_name: Snehlata
  full_name: Tigala, Snehlata
  last_name: Tigala
- first_name: Zeeshan T.
  full_name: Virk, Zeeshan T.
  last_name: Virk
- first_name: Philippus
  full_name: Wester, Philippus
  last_name: Wester
- first_name: James L.
  full_name: Wescoat, James L.
  last_name: Wescoat
citation:
  ama: 'Orr A, Ahmad B, Alam U, et al. Knowledge priorities on climate change and
    water in the Upper Indus Basin: A horizon scanning exercise to identify the Top
    100 research questions in social and natural sciences. <i>Earth’s Future</i>.
    2022;10(4). doi:<a href="https://doi.org/10.1029/2021ef002619">10.1029/2021ef002619</a>'
  apa: 'Orr, A., Ahmad, B., Alam, U., Appadurai, A., Bharucha, Z. P., Biemans, H.,
    … Wescoat, J. L. (2022). Knowledge priorities on climate change and water in the
    Upper Indus Basin: A horizon scanning exercise to identify the Top 100 research
    questions in social and natural sciences. <i>Earth’s Future</i>. American Geophysical
    Union. <a href="https://doi.org/10.1029/2021ef002619">https://doi.org/10.1029/2021ef002619</a>'
  chicago: 'Orr, Andrew, Bashir Ahmad, Undala Alam, ArivudaiNambi Appadurai, Zareen
    P. Bharucha, Hester Biemans, Tobias Bolch, et al. “Knowledge Priorities on Climate
    Change and Water in the Upper Indus Basin: A Horizon Scanning Exercise to Identify
    the Top 100 Research Questions in Social and Natural Sciences.” <i>Earth’s Future</i>.
    American Geophysical Union, 2022. <a href="https://doi.org/10.1029/2021ef002619">https://doi.org/10.1029/2021ef002619</a>.'
  ieee: 'A. Orr <i>et al.</i>, “Knowledge priorities on climate change and water in
    the Upper Indus Basin: A horizon scanning exercise to identify the Top 100 research
    questions in social and natural sciences,” <i>Earth’s Future</i>, vol. 10, no.
    4. American Geophysical Union, 2022.'
  ista: 'Orr A, Ahmad B, Alam U, Appadurai A, Bharucha ZP, Biemans H, Bolch T, Chaulagain
    NP, Dhaubanjar S, Dimri AP, Dixon H, Fowler HJ, Gioli G, Halvorson SJ, Hussain
    A, Jeelani G, Kamal S, Khalid IS, Liu S, Lutz A, Mehra MK, Miles E, Momblanch
    A, Muccione V, Mukherji A, Mustafa D, Najmuddin O, Nasimi MN, Nüsser M, Pandey
    VP, Parveen S, Pellicciotti F, Pollino C, Potter E, Qazizada MR, Ray S, Romshoo
    S, Sarkar SK, Sawas A, Sen S, Shah A, Shah MAA, Shea JM, Sheikh AT, Shrestha AB,
    Tayal S, Tigala S, Virk ZT, Wester P, Wescoat JL. 2022. Knowledge priorities on
    climate change and water in the Upper Indus Basin: A horizon scanning exercise
    to identify the Top 100 research questions in social and natural sciences. Earth’s
    Future. 10(4), e2021EF002619.'
  mla: 'Orr, Andrew, et al. “Knowledge Priorities on Climate Change and Water in the
    Upper Indus Basin: A Horizon Scanning Exercise to Identify the Top 100 Research
    Questions in Social and Natural Sciences.” <i>Earth’s Future</i>, vol. 10, no.
    4, e2021EF002619, American Geophysical Union, 2022, doi:<a href="https://doi.org/10.1029/2021ef002619">10.1029/2021ef002619</a>.'
  short: A. Orr, B. Ahmad, U. Alam, A. Appadurai, Z.P. Bharucha, H. Biemans, T. Bolch,
    N.P. Chaulagain, S. Dhaubanjar, A.P. Dimri, H. Dixon, H.J. Fowler, G. Gioli, S.J.
    Halvorson, A. Hussain, G. Jeelani, S. Kamal, I.S. Khalid, S. Liu, A. Lutz, M.K.
    Mehra, E. Miles, A. Momblanch, V. Muccione, A. Mukherji, D. Mustafa, O. Najmuddin,
    M.N. Nasimi, M. Nüsser, V.P. Pandey, S. Parveen, F. Pellicciotti, C. Pollino,
    E. Potter, M.R. Qazizada, S. Ray, S. Romshoo, S.K. Sarkar, A. Sawas, S. Sen, A.
    Shah, M.A.A. Shah, J.M. Shea, A.T. Sheikh, A.B. Shrestha, S. Tayal, S. Tigala,
    Z.T. Virk, P. Wester, J.L. Wescoat, Earth’s Future 10 (2022).
date_created: 2023-02-20T08:10:23Z
date_published: 2022-04-01T00:00:00Z
date_updated: 2023-02-28T13:41:50Z
day: '01'
doi: 10.1029/2021ef002619
extern: '1'
intvolume: '        10'
issue: '4'
keyword:
- Earth and Planetary Sciences (miscellaneous)
- General Environmental Science
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1029/2021EF002619
month: '04'
oa: 1
oa_version: Published Version
publication: Earth's Future
publication_identifier:
  issn:
  - 2328-4277
publication_status: published
publisher: American Geophysical Union
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Knowledge priorities on climate change and water in the Upper Indus Basin:
  A horizon scanning exercise to identify the Top 100 research questions in social
  and natural sciences'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 10
year: '2022'
...
---
_id: '12581'
abstract:
- lang: eng
  text: Topographic development via paraglacial slope failure (PSF) represents a complex
    interplay between geological structure, climate, and glacial denudation. Southeastern
    Tibet has experienced amongst the highest rates of ice mass loss in High Mountain
    Asia in recent decades, but few studies have focused on the implications of this
    mass loss on the stability of paraglacial slopes. We used repeat satellite- and
    unpiloted aerial vehicle (UAV)-derived imagery between 1990 and 2020 as the basis
    for mapping PSFs from slopes adjacent to Hailuogou Glacier (HLG), a 5 km long
    monsoon temperate valley glacier in the Mt. Gongga region. We observed recent
    lowering of the glacier tongue surface at rates of up to 0.88 m a−1 in the period
    2000 to 2016, whilst overall paraglacial bare ground area (PBGA) on glacier-adjacent
    slopes increased from 0.31 ± 0.27 km2 in 1990 to 1.38 ± 0.06 km2 in 2020. Decadal
    PBGA expansion rates were ∼ 0.01 km2 a−1, 0.02 km2 a−1, and 0.08 km2 in the periods
    1990–2000, 2000–2011, and 2011–2020 respectively, indicating an increasing rate
    of expansion of PBGA. Three types of PSFs, including rockfalls, sediment-mantled
    slope slides, and headward gully erosion, were mapped, with a total area of 0.75 ± 0.03 km2
    in 2020. South-facing valley slopes (true left of the glacier) exhibited more
    destabilization (56 % of the total PSF area) than north-facing (true right) valley
    slopes (44 % of the total PSF area). Deformation of sediment-mantled moraine slopes
    (mean 1.65–2.63 ± 0.04 cm d−1) and an increase in erosion activity in ice-marginal
    tributary valleys caused by a drop in local base level (gully headward erosion
    rates are 0.76–3.39 cm d−1) have occurred in tandem with recent glacier downwasting.
    We also observe deformation of glacier ice, possibly driven by destabilization
    of lateral moraine, as has been reported in other deglaciating mountain glacier
    catchments. The formation, evolution, and future trajectory of PSFs at HLG (as
    well as other monsoon-dominated deglaciating mountain areas) are related to glacial
    history, including recent rapid downwasting leading to the exposure of steep,
    unstable bedrock and moraine slopes, and climatic conditions that promote slope
    instability, such as very high seasonal precipitation and seasonal temperature
    fluctuations that are conducive to freeze–thaw and ice segregation processes.
article_processing_charge: No
article_type: original
author:
- first_name: Yan
  full_name: Zhong, Yan
  last_name: Zhong
- first_name: Qiao
  full_name: Liu, Qiao
  last_name: Liu
- first_name: Matthew
  full_name: Westoby, Matthew
  last_name: Westoby
- first_name: Yong
  full_name: Nie, Yong
  last_name: Nie
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
- first_name: Bo
  full_name: Zhang, Bo
  last_name: Zhang
- first_name: Jialun
  full_name: Cai, Jialun
  last_name: Cai
- first_name: Guoxiang
  full_name: Liu, Guoxiang
  last_name: Liu
- first_name: Haijun
  full_name: Liao, Haijun
  last_name: Liao
- first_name: Xuyang
  full_name: Lu, Xuyang
  last_name: Lu
citation:
  ama: Zhong Y, Liu Q, Westoby M, et al. Intensified paraglacial slope failures due
    to accelerating downwasting of a temperate glacier in Mt. Gongga, southeastern
    Tibetan Plateau. <i>Earth Surface Dynamics</i>. 2022;10(1):23-42. doi:<a href="https://doi.org/10.5194/esurf-10-23-2022">10.5194/esurf-10-23-2022</a>
  apa: Zhong, Y., Liu, Q., Westoby, M., Nie, Y., Pellicciotti, F., Zhang, B., … Lu,
    X. (2022). Intensified paraglacial slope failures due to accelerating downwasting
    of a temperate glacier in Mt. Gongga, southeastern Tibetan Plateau. <i>Earth Surface
    Dynamics</i>. Copernicus Publications. <a href="https://doi.org/10.5194/esurf-10-23-2022">https://doi.org/10.5194/esurf-10-23-2022</a>
  chicago: Zhong, Yan, Qiao Liu, Matthew Westoby, Yong Nie, Francesca Pellicciotti,
    Bo Zhang, Jialun Cai, Guoxiang Liu, Haijun Liao, and Xuyang Lu. “Intensified Paraglacial
    Slope Failures Due to Accelerating Downwasting of a Temperate Glacier in Mt. Gongga,
    Southeastern Tibetan Plateau.” <i>Earth Surface Dynamics</i>. Copernicus Publications,
    2022. <a href="https://doi.org/10.5194/esurf-10-23-2022">https://doi.org/10.5194/esurf-10-23-2022</a>.
  ieee: Y. Zhong <i>et al.</i>, “Intensified paraglacial slope failures due to accelerating
    downwasting of a temperate glacier in Mt. Gongga, southeastern Tibetan Plateau,”
    <i>Earth Surface Dynamics</i>, vol. 10, no. 1. Copernicus Publications, pp. 23–42,
    2022.
  ista: Zhong Y, Liu Q, Westoby M, Nie Y, Pellicciotti F, Zhang B, Cai J, Liu G, Liao
    H, Lu X. 2022. Intensified paraglacial slope failures due to accelerating downwasting
    of a temperate glacier in Mt. Gongga, southeastern Tibetan Plateau. Earth Surface
    Dynamics. 10(1), 23–42.
  mla: Zhong, Yan, et al. “Intensified Paraglacial Slope Failures Due to Accelerating
    Downwasting of a Temperate Glacier in Mt. Gongga, Southeastern Tibetan Plateau.”
    <i>Earth Surface Dynamics</i>, vol. 10, no. 1, Copernicus Publications, 2022,
    pp. 23–42, doi:<a href="https://doi.org/10.5194/esurf-10-23-2022">10.5194/esurf-10-23-2022</a>.
  short: Y. Zhong, Q. Liu, M. Westoby, Y. Nie, F. Pellicciotti, B. Zhang, J. Cai,
    G. Liu, H. Liao, X. Lu, Earth Surface Dynamics 10 (2022) 23–42.
date_created: 2023-02-20T08:10:30Z
date_published: 2022-01-11T00:00:00Z
date_updated: 2023-02-28T13:38:27Z
day: '11'
doi: 10.5194/esurf-10-23-2022
extern: '1'
intvolume: '        10'
issue: '1'
keyword:
- Earth-Surface Processes
- Geophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5194/esurf-10-23-2022
month: '01'
oa: 1
oa_version: Published Version
page: 23-42
publication: Earth Surface Dynamics
publication_identifier:
  issn:
  - 2196-632X
publication_status: published
publisher: Copernicus Publications
quality_controlled: '1'
scopus_import: '1'
status: public
title: Intensified paraglacial slope failures due to accelerating downwasting of a
  temperate glacier in Mt. Gongga, southeastern Tibetan Plateau
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 10
year: '2022'
...
---
_id: '12582'
abstract:
- lang: eng
  text: Supraglacial debris covers 7% of mountain glacier area globally and generally
    reduces glacier surface melt. Enhanced energy absorption at ice cliffs and supraglacial
    ponds scattered across the debris surface leads these features to contribute disproportionately
    to glacier-wide ablation. However, the degree to which cliffs and ponds actually
    increase melt rates remains unclear, as these features have only been studied
    in a detailed manner for selected locations, almost exclusively in High Mountain
    Asia. In this study we model the surface energy balance for debris-covered ice,
    ice cliffs, and supraglacial ponds with a set of automatic weather station records
    representing the global prevalence of debris-covered glacier ice. We generate
    5000 random sets of values for physical parameters using probability distributions
    derived from literature, which we use to investigate relative melt rates and to
    isolate the melt responses of debris, cliffs and ponds to the site-specific meteorological
    forcing. Modelled sub-debris melt rates are primarily controlled by debris thickness
    and thermal conductivity. At a reference thickness of 0.1 m, sub-debris melt rates
    vary considerably, differing by up to a factor of four between sites, mainly attributable
    to air temperature differences. We find that melt rates for ice cliffs are consistently
    2–3× the melt rate for clean glacier ice, but this melt enhancement decays with
    increasing clean ice melt rates. Energy absorption at supraglacial ponds is dominated
    by latent heat exchange and is therefore highly sensitive to wind speed and relative
    humidity, but is generally less than for clean ice. Our results provide reference
    melt enhancement factors for melt modelling of debris-covered glacier sites, globally,
    while highlighting the need for direct measurement of debris-covered glacier surface
    characteristics, physical parameters, and local meteorological conditions at a
    variety of sites around the world.
article_number: '064004'
article_processing_charge: No
article_type: letter_note
author:
- first_name: E S
  full_name: Miles, E S
  last_name: Miles
- first_name: J F
  full_name: Steiner, J F
  last_name: Steiner
- first_name: P
  full_name: Buri, P
  last_name: Buri
- first_name: W W
  full_name: Immerzeel, W W
  last_name: Immerzeel
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
citation:
  ama: Miles ES, Steiner JF, Buri P, Immerzeel WW, Pellicciotti F. Controls on the
    relative melt rates of debris-covered glacier surfaces. <i>Environmental Research
    Letters</i>. 2022;17(6). doi:<a href="https://doi.org/10.1088/1748-9326/ac6966">10.1088/1748-9326/ac6966</a>
  apa: Miles, E. S., Steiner, J. F., Buri, P., Immerzeel, W. W., &#38; Pellicciotti,
    F. (2022). Controls on the relative melt rates of debris-covered glacier surfaces.
    <i>Environmental Research Letters</i>. IOP Publishing. <a href="https://doi.org/10.1088/1748-9326/ac6966">https://doi.org/10.1088/1748-9326/ac6966</a>
  chicago: Miles, E S, J F Steiner, P Buri, W W Immerzeel, and Francesca Pellicciotti.
    “Controls on the Relative Melt Rates of Debris-Covered Glacier Surfaces.” <i>Environmental
    Research Letters</i>. IOP Publishing, 2022. <a href="https://doi.org/10.1088/1748-9326/ac6966">https://doi.org/10.1088/1748-9326/ac6966</a>.
  ieee: E. S. Miles, J. F. Steiner, P. Buri, W. W. Immerzeel, and F. Pellicciotti,
    “Controls on the relative melt rates of debris-covered glacier surfaces,” <i>Environmental
    Research Letters</i>, vol. 17, no. 6. IOP Publishing, 2022.
  ista: Miles ES, Steiner JF, Buri P, Immerzeel WW, Pellicciotti F. 2022. Controls
    on the relative melt rates of debris-covered glacier surfaces. Environmental Research
    Letters. 17(6), 064004.
  mla: Miles, E. S., et al. “Controls on the Relative Melt Rates of Debris-Covered
    Glacier Surfaces.” <i>Environmental Research Letters</i>, vol. 17, no. 6, 064004,
    IOP Publishing, 2022, doi:<a href="https://doi.org/10.1088/1748-9326/ac6966">10.1088/1748-9326/ac6966</a>.
  short: E.S. Miles, J.F. Steiner, P. Buri, W.W. Immerzeel, F. Pellicciotti, Environmental
    Research Letters 17 (2022).
date_created: 2023-02-20T08:10:37Z
date_published: 2022-06-01T00:00:00Z
date_updated: 2023-02-28T13:34:25Z
day: '01'
doi: 10.1088/1748-9326/ac6966
extern: '1'
intvolume: '        17'
issue: '6'
keyword:
- Public Health
- Environmental and Occupational Health
- General Environmental Science
- Renewable Energy
- Sustainability and the Environment
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1088/1748-9326/ac6966
month: '06'
oa: 1
oa_version: Published Version
publication: Environmental Research Letters
publication_identifier:
  issn:
  - 1748-9326
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Controls on the relative melt rates of debris-covered glacier surfaces
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 17
year: '2022'
...
---
_id: '12664'
abstract:
- lang: eng
  text: Randomized smoothing is currently considered the state-of-the-art method to
    obtain certifiably robust classifiers. Despite its remarkable performance, the
    method is associated with various serious problems such as “certified accuracy
    waterfalls”, certification vs. accuracy trade-off, or even fairness issues. Input-dependent
    smoothing approaches have been proposed with intention of overcoming these flaws.
    However, we demonstrate that these methods lack formal guarantees and so the resulting
    certificates are not justified. We show that in general, the input-dependent smoothing
    suffers from the curse of dimensionality, forcing the variance function to have
    low semi-elasticity. On the other hand, we provide a theoretical and practical
    framework that enables the usage of input-dependent smoothing even in the presence
    of the curse of dimensionality, under strict restrictions. We present one concrete
    design of the smoothing variance function and test it on CIFAR10 and MNIST. Our
    design mitigates some of the problems of classical smoothing and is formally underlined,
    yet further improvement of the design is still necessary.
article_processing_charge: No
arxiv: 1
author:
- first_name: Peter
  full_name: Súkeník, Peter
  id: d64d6a8d-eb8e-11eb-b029-96fd216dec3c
  last_name: Súkeník
- first_name: Aleksei
  full_name: Kuvshinov, Aleksei
  last_name: Kuvshinov
- first_name: Stephan
  full_name: Günnemann, Stephan
  last_name: Günnemann
citation:
  ama: 'Súkeník P, Kuvshinov A, Günnemann S. Intriguing properties of input-dependent
    randomized smoothing. In: <i>Proceedings of the 39th International Conference
    on Machine Learning</i>. Vol 162. ML Research Press; 2022:20697-20743.'
  apa: 'Súkeník, P., Kuvshinov, A., &#38; Günnemann, S. (2022). Intriguing properties
    of input-dependent randomized smoothing. In <i>Proceedings of the 39th International
    Conference on Machine Learning</i> (Vol. 162, pp. 20697–20743). Baltimore, MD,
    United States: ML Research Press.'
  chicago: Súkeník, Peter, Aleksei Kuvshinov, and Stephan Günnemann. “Intriguing Properties
    of Input-Dependent Randomized Smoothing.” In <i>Proceedings of the 39th International
    Conference on Machine Learning</i>, 162:20697–743. ML Research Press, 2022.
  ieee: P. Súkeník, A. Kuvshinov, and S. Günnemann, “Intriguing properties of input-dependent
    randomized smoothing,” in <i>Proceedings of the 39th International Conference
    on Machine Learning</i>, Baltimore, MD, United States, 2022, vol. 162, pp. 20697–20743.
  ista: 'Súkeník P, Kuvshinov A, Günnemann S. 2022. Intriguing properties of input-dependent
    randomized smoothing. Proceedings of the 39th International Conference on Machine
    Learning. ICML: International Conference on Machine Learning vol. 162, 20697–20743.'
  mla: Súkeník, Peter, et al. “Intriguing Properties of Input-Dependent Randomized
    Smoothing.” <i>Proceedings of the 39th International Conference on Machine Learning</i>,
    vol. 162, ML Research Press, 2022, pp. 20697–743.
  short: P. Súkeník, A. Kuvshinov, S. Günnemann, in:, Proceedings of the 39th International
    Conference on Machine Learning, ML Research Press, 2022, pp. 20697–20743.
conference:
  end_date: 2022-07-23
  location: Baltimore, MD, United States
  name: 'ICML: International Conference on Machine Learning'
  start_date: 2022-07-17
corr_author: '1'
date_created: 2023-02-20T08:30:21Z
date_published: 2022-07-19T00:00:00Z
date_updated: 2025-07-10T11:50:28Z
day: '19'
ddc:
- '004'
external_id:
  arxiv:
  - '2110.05365'
file:
- access_level: open_access
  checksum: ab8695b1e24fb4fef4f1f9cd63ca8238
  content_type: application/pdf
  creator: chl
  date_created: 2023-02-20T08:30:10Z
  date_updated: 2023-02-20T08:30:10Z
  file_id: '12665'
  file_name: sukeni-k22a.pdf
  file_size: 8470811
  relation: main_file
  success: 1
file_date_updated: 2023-02-20T08:30:10Z
has_accepted_license: '1'
intvolume: '       162'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 20697-20743
publication: Proceedings of the 39th International Conference on Machine Learning
publication_status: published
publisher: ML Research Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Intriguing properties of input-dependent randomized smoothing
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 162
year: '2022'
...
---
_id: '12670'
abstract:
- lang: eng
  text: DNA methylation plays essential homeostatic functions in eukaryotic genomes.
    In animals, DNA methylation is also developmentally regulated and, in turn, regulates
    development. In the past two decades, huge research effort has endorsed the understanding
    that DNA methylation plays a similar role in plant development, especially during
    sexual reproduction. The power of whole-genome sequencing and cell isolation techniques,
    as well as bioinformatics tools, have enabled recent studies to reveal dynamic
    changes in DNA methylation during germline development. Furthermore, the combination
    of these technological advances with genetics, developmental biology and cell
    biology tools has revealed functional methylation reprogramming events that control
    gene and transposon activities in flowering plant germlines. In this review, we
    discuss the major advances in our knowledge of DNA methylation dynamics during
    male and female germline development in flowering plants.
article_processing_charge: No
article_type: review
author:
- first_name: Shengbo
  full_name: He, Shengbo
  last_name: He
- first_name: Xiaoqi
  full_name: Feng, Xiaoqi
  id: e0164712-22ee-11ed-b12a-d80fcdf35958
  last_name: Feng
  orcid: 0000-0002-4008-1234
citation:
  ama: He S, Feng X. DNA methylation dynamics during germline development. <i>Journal
    of Integrative Plant Biology</i>. 2022;64(12):2240-2251. doi:<a href="https://doi.org/10.1111/jipb.13422">10.1111/jipb.13422</a>
  apa: He, S., &#38; Feng, X. (2022). DNA methylation dynamics during germline development.
    <i>Journal of Integrative Plant Biology</i>. Wiley. <a href="https://doi.org/10.1111/jipb.13422">https://doi.org/10.1111/jipb.13422</a>
  chicago: He, Shengbo, and Xiaoqi Feng. “DNA Methylation Dynamics during Germline
    Development.” <i>Journal of Integrative Plant Biology</i>. Wiley, 2022. <a href="https://doi.org/10.1111/jipb.13422">https://doi.org/10.1111/jipb.13422</a>.
  ieee: S. He and X. Feng, “DNA methylation dynamics during germline development,”
    <i>Journal of Integrative Plant Biology</i>, vol. 64, no. 12. Wiley, pp. 2240–2251,
    2022.
  ista: He S, Feng X. 2022. DNA methylation dynamics during germline development.
    Journal of Integrative Plant Biology. 64(12), 2240–2251.
  mla: He, Shengbo, and Xiaoqi Feng. “DNA Methylation Dynamics during Germline Development.”
    <i>Journal of Integrative Plant Biology</i>, vol. 64, no. 12, Wiley, 2022, pp.
    2240–51, doi:<a href="https://doi.org/10.1111/jipb.13422">10.1111/jipb.13422</a>.
  short: S. He, X. Feng, Journal of Integrative Plant Biology 64 (2022) 2240–2251.
date_created: 2023-02-23T09:15:57Z
date_published: 2022-12-07T00:00:00Z
date_updated: 2024-10-14T12:03:14Z
day: '07'
department:
- _id: XiFe
doi: 10.1111/jipb.13422
extern: '1'
external_id:
  pmid:
  - '36478632'
intvolume: '        64'
issue: '12'
keyword:
- Plant Science
- General Biochemistry
- Genetics and Molecular Biology
- Biochemistry
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1111/jipb.13422
month: '12'
oa: 1
oa_version: Published Version
page: 2240-2251
pmid: 1
publication: Journal of Integrative Plant Biology
publication_identifier:
  eissn:
  - 1744-7909
  issn:
  - 1672-9072
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: DNA methylation dynamics during germline development
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 64
year: '2022'
...
---
_id: '12671'
abstract:
- lang: eng
  text: Sperm chromatin is typically transformed by protamines into a compact and
    transcriptionally inactive state1,2. Sperm cells of flowering plants lack protamines,
    yet they have small, transcriptionally active nuclei with chromatin condensed
    through an unknown mechanism3,4. Here we show that a histone variant, H2B.8, mediates
    sperm chromatin and nuclear condensation in Arabidopsis thaliana. Loss of H2B.8
    causes enlarged sperm nuclei with dispersed chromatin, whereas ectopic expression
    in somatic cells produces smaller nuclei with aggregated chromatin. This result
    demonstrates that H2B.8 is sufficient for chromatin condensation. H2B.8 aggregates
    transcriptionally inactive AT-rich chromatin into phase-separated condensates,
    which facilitates nuclear compaction without reducing transcription. Reciprocal
    crosses show that mutation of h2b.8 reduces male transmission, which suggests
    that H2B.8-mediated sperm compaction is important for fertility. Altogether, our
    results reveal a new mechanism of nuclear compaction through global aggregation
    of unexpressed chromatin. We propose that H2B.8 is an evolutionary innovation
    of flowering plants that achieves nuclear condensation compatible with active
    transcription.
article_processing_charge: No
article_type: original
author:
- first_name: Toby
  full_name: Buttress, Toby
  last_name: Buttress
- first_name: Shengbo
  full_name: He, Shengbo
  last_name: He
- first_name: Liang
  full_name: Wang, Liang
  last_name: Wang
- first_name: Shaoli
  full_name: Zhou, Shaoli
  last_name: Zhou
- first_name: Gerhard
  full_name: Saalbach, Gerhard
  last_name: Saalbach
- first_name: Martin
  full_name: Vickers, Martin
  last_name: Vickers
- first_name: Guohong
  full_name: Li, Guohong
  last_name: Li
- first_name: Pilong
  full_name: Li, Pilong
  last_name: Li
- first_name: Xiaoqi
  full_name: Feng, Xiaoqi
  id: e0164712-22ee-11ed-b12a-d80fcdf35958
  last_name: Feng
  orcid: 0000-0002-4008-1234
citation:
  ama: Buttress T, He S, Wang L, et al. Histone H2B.8 compacts flowering plant sperm
    through chromatin phase separation. <i>Nature</i>. 2022;611(7936):614-622. doi:<a
    href="https://doi.org/10.1038/s41586-022-05386-6">10.1038/s41586-022-05386-6</a>
  apa: Buttress, T., He, S., Wang, L., Zhou, S., Saalbach, G., Vickers, M., … Feng,
    X. (2022). Histone H2B.8 compacts flowering plant sperm through chromatin phase
    separation. <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/s41586-022-05386-6">https://doi.org/10.1038/s41586-022-05386-6</a>
  chicago: Buttress, Toby, Shengbo He, Liang Wang, Shaoli Zhou, Gerhard Saalbach,
    Martin Vickers, Guohong Li, Pilong Li, and Xiaoqi Feng. “Histone H2B.8 Compacts
    Flowering Plant Sperm through Chromatin Phase Separation.” <i>Nature</i>. Springer
    Nature, 2022. <a href="https://doi.org/10.1038/s41586-022-05386-6">https://doi.org/10.1038/s41586-022-05386-6</a>.
  ieee: T. Buttress <i>et al.</i>, “Histone H2B.8 compacts flowering plant sperm through
    chromatin phase separation,” <i>Nature</i>, vol. 611, no. 7936. Springer Nature,
    pp. 614–622, 2022.
  ista: Buttress T, He S, Wang L, Zhou S, Saalbach G, Vickers M, Li G, Li P, Feng
    X. 2022. Histone H2B.8 compacts flowering plant sperm through chromatin phase
    separation. Nature. 611(7936), 614–622.
  mla: Buttress, Toby, et al. “Histone H2B.8 Compacts Flowering Plant Sperm through
    Chromatin Phase Separation.” <i>Nature</i>, vol. 611, no. 7936, Springer Nature,
    2022, pp. 614–22, doi:<a href="https://doi.org/10.1038/s41586-022-05386-6">10.1038/s41586-022-05386-6</a>.
  short: T. Buttress, S. He, L. Wang, S. Zhou, G. Saalbach, M. Vickers, G. Li, P.
    Li, X. Feng, Nature 611 (2022) 614–622.
date_created: 2023-02-23T09:17:05Z
date_published: 2022-11-17T00:00:00Z
date_updated: 2024-10-14T12:03:36Z
day: '17'
department:
- _id: XiFe
doi: 10.1038/s41586-022-05386-6
extern: '1'
external_id:
  pmid:
  - '36323776'
intvolume: '       611'
issue: '7936'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1038/s41586-022-05386-6
month: '11'
oa: 1
oa_version: Published Version
page: 614-622
pmid: 1
publication: Nature
publication_identifier:
  eissn:
  - 1476-4687
  issn:
  - 0028-0836
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Histone H2B.8 compacts flowering plant sperm through chromatin phase separation
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 611
year: '2022'
...
---
_id: '12677'
abstract:
- lang: eng
  text: "In modern sample-driven Prophet Inequality, an adversary chooses a sequence
    of n items with values v1,v2,…,vn to be presented to a decision maker (DM). The
    process follows in two phases. In the first phase (sampling phase), some items,
    possibly selected at random, are revealed to the DM, but she can never accept
    them. In the second phase, the DM is presented with the other items in a random
    order and online fashion. For each item, she must make an irrevocable decision
    to either accept the item and stop the process or reject the item forever and
    proceed to the next item. The goal of the DM is to maximize the expected value
    as compared to a Prophet (or offline algorithm) that has access to all information.
    In this setting, the sampling phase has no cost and is not part of the optimization
    process. However, in many scenarios, the samples are obtained as part of the decision-making
    process.\r\nWe model this aspect as a two-phase Prophet Inequality where an adversary
    chooses a sequence of 2n items with values v1,v2,…,v2n and the items are randomly
    ordered. Finally, there are two phases of the Prophet Inequality problem with
    the first n-items and the rest of the items, respectively. We show that some basic
    algorithms achieve a ratio of at most 0.450. We present an algorithm that achieves
    a ratio of at least 0.495. Finally, we show that for every algorithm the ratio
    it can achieve is at most 0.502. Hence our algorithm is near-optimal."
acknowledgement: This research was partially supported by the ERC CoG 863818 (ForM-SMArt)
  grant.
article_number: '2209.14368'
article_processing_charge: No
arxiv: 1
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Mona
  full_name: Mohammadi, Mona
  id: 4363614d-b686-11ed-a7d5-ac9e4a24bc2e
  last_name: Mohammadi
- first_name: Raimundo J
  full_name: Saona Urmeneta, Raimundo J
  id: BD1DF4C4-D767-11E9-B658-BC13E6697425
  last_name: Saona Urmeneta
  orcid: 0000-0001-5103-038X
citation:
  ama: Chatterjee K, Mohammadi M, Saona Urmeneta RJ. Repeated prophet inequality with
    near-optimal bounds. <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/ARXIV.2209.14368">10.48550/ARXIV.2209.14368</a>
  apa: Chatterjee, K., Mohammadi, M., &#38; Saona Urmeneta, R. J. (n.d.). Repeated
    prophet inequality with near-optimal bounds. <i>arXiv</i>. <a href="https://doi.org/10.48550/ARXIV.2209.14368">https://doi.org/10.48550/ARXIV.2209.14368</a>
  chicago: Chatterjee, Krishnendu, Mona Mohammadi, and Raimundo J Saona Urmeneta.
    “Repeated Prophet Inequality with Near-Optimal Bounds.” <i>ArXiv</i>, n.d. <a
    href="https://doi.org/10.48550/ARXIV.2209.14368">https://doi.org/10.48550/ARXIV.2209.14368</a>.
  ieee: K. Chatterjee, M. Mohammadi, and R. J. Saona Urmeneta, “Repeated prophet inequality
    with near-optimal bounds,” <i>arXiv</i>. .
  ista: Chatterjee K, Mohammadi M, Saona Urmeneta RJ. Repeated prophet inequality
    with near-optimal bounds. arXiv, 2209.14368.
  mla: Chatterjee, Krishnendu, et al. “Repeated Prophet Inequality with Near-Optimal
    Bounds.” <i>ArXiv</i>, 2209.14368, doi:<a href="https://doi.org/10.48550/ARXIV.2209.14368">10.48550/ARXIV.2209.14368</a>.
  short: K. Chatterjee, M. Mohammadi, R.J. Saona Urmeneta, ArXiv (n.d.).
corr_author: '1'
date_created: 2023-02-24T12:21:40Z
date_published: 2022-09-28T00:00:00Z
date_updated: 2025-04-14T07:52:48Z
day: '28'
department:
- _id: GradSch
- _id: KrCh
doi: 10.48550/ARXIV.2209.14368
ec_funded: 1
external_id:
  arxiv:
  - '2209.14368'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: ' https://doi.org/10.48550/arXiv.2209.14368'
month: '09'
oa: 1
oa_version: Preprint
project:
- _id: 0599E47C-7A3F-11EA-A408-12923DDC885E
  call_identifier: H2020
  grant_number: '863818'
  name: 'Formal Methods for Stochastic Models: Algorithms and Applications'
publication: arXiv
publication_status: submitted
status: public
title: Repeated prophet inequality with near-optimal bounds
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '12684'
abstract:
- lang: eng
  text: Given a place  ω  of a global function field  K  over a finite field, with
    associated affine function ring  Rω  and completion  Kω , the aim of this paper
    is to give an effective joint equidistribution result for renormalized primitive
    lattice points  (a,b)∈Rω2  in the plane  Kω2 , and for renormalized solutions
    to the gcd equation  ax+by=1 . The main tools are techniques of Goronik and Nevo
    for counting lattice points in well-rounded families of subsets. This gives a
    sharper analog in positive characteristic of a result of Nevo and the first author
    for the equidistribution of the primitive lattice points in  \ZZ2 .
acknowledgement: "The authors warmly thank Amos Nevo for having presented the authors
  to each other during\r\na beautiful conference in Goa in February 2016, where the
  idea of this paper was born. The\r\nfirst author thanks the IHES for two post-doctoral
  years when most of this paper was discussed,\r\nand the Topology team in Orsay for
  financial support at the final stage. The first author was\r\nsupported by the EPRSC
  EP/P026710/1 grant. Finally, we warmly thank the referee for many\r\nvery helpful
  comments that have improved the readability of this paper."
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Tal
  full_name: Horesh, Tal
  id: C8B7BF48-8D81-11E9-BCA9-F536E6697425
  last_name: Horesh
- first_name: Frédéric
  full_name: Paulin, Frédéric
  last_name: Paulin
citation:
  ama: Horesh T, Paulin F. Effective equidistribution of lattice points in positive
    characteristic. <i>Journal de Theorie des Nombres de Bordeaux</i>. 2022;34(3):679-703.
    doi:<a href="https://doi.org/10.5802/JTNB.1222">10.5802/JTNB.1222</a>
  apa: Horesh, T., &#38; Paulin, F. (2022). Effective equidistribution of lattice
    points in positive characteristic. <i>Journal de Theorie Des Nombres de Bordeaux</i>.
    Université de Bordeaux. <a href="https://doi.org/10.5802/JTNB.1222">https://doi.org/10.5802/JTNB.1222</a>
  chicago: Horesh, Tal, and Frédéric Paulin. “Effective Equidistribution of Lattice
    Points in Positive Characteristic.” <i>Journal de Theorie Des Nombres de Bordeaux</i>.
    Université de Bordeaux, 2022. <a href="https://doi.org/10.5802/JTNB.1222">https://doi.org/10.5802/JTNB.1222</a>.
  ieee: T. Horesh and F. Paulin, “Effective equidistribution of lattice points in
    positive characteristic,” <i>Journal de Theorie des Nombres de Bordeaux</i>, vol.
    34, no. 3. Université de Bordeaux, pp. 679–703, 2022.
  ista: Horesh T, Paulin F. 2022. Effective equidistribution of lattice points in
    positive characteristic. Journal de Theorie des Nombres de Bordeaux. 34(3), 679–703.
  mla: Horesh, Tal, and Frédéric Paulin. “Effective Equidistribution of Lattice Points
    in Positive Characteristic.” <i>Journal de Theorie Des Nombres de Bordeaux</i>,
    vol. 34, no. 3, Université de Bordeaux, 2022, pp. 679–703, doi:<a href="https://doi.org/10.5802/JTNB.1222">10.5802/JTNB.1222</a>.
  short: T. Horesh, F. Paulin, Journal de Theorie Des Nombres de Bordeaux 34 (2022)
    679–703.
corr_author: '1'
date_created: 2023-02-26T23:01:02Z
date_published: 2022-01-27T00:00:00Z
date_updated: 2025-05-14T11:23:08Z
day: '27'
ddc:
- '510'
department:
- _id: TiBr
doi: 10.5802/JTNB.1222
external_id:
  arxiv:
  - '2001.01534'
  isi:
  - '000926504300003'
file:
- access_level: open_access
  checksum: 08f28fded270251f568f610cf5166d69
  content_type: application/pdf
  creator: dernst
  date_created: 2023-02-27T09:10:13Z
  date_updated: 2023-02-27T09:10:13Z
  file_id: '12689'
  file_name: 2023_JourTheorieNombreBordeaux_Horesh.pdf
  file_size: 870468
  relation: main_file
  success: 1
file_date_updated: 2023-02-27T09:10:13Z
has_accepted_license: '1'
intvolume: '        34'
isi: 1
issue: '3'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nd/4.0/
month: '01'
oa: 1
oa_version: Published Version
page: 679-703
publication: Journal de Theorie des Nombres de Bordeaux
publication_identifier:
  eissn:
  - 2118-8572
  issn:
  - 1246-7405
publication_status: published
publisher: Université de Bordeaux
quality_controlled: '1'
scopus_import: '1'
status: public
title: Effective equidistribution of lattice points in positive characteristic
tmp:
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  legal_code_url: https://creativecommons.org/licenses/by-nd/4.0/legalcode
  name: Creative Commons Attribution-NoDerivatives 4.0 International (CC BY-ND 4.0)
  short: CC BY-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 34
year: '2022'
...
---
_id: '12775'
abstract:
- lang: eng
  text: "We consider the problem of approximating the reachability probabilities in
    Markov decision processes (MDP) with uncountable (continuous) state and action
    spaces. While there are algorithms that, for special classes of such MDP, provide
    a sequence of approximations converging to the true value in the limit, our aim
    is to obtain an algorithm with guarantees on the precision of the approximation.\r\nAs
    this problem is undecidable in general, assumptions on the MDP are necessary.
    Our main contribution is to identify sufficient assumptions that are as weak as
    possible, thus approaching the \"boundary\" of which systems can be correctly
    and reliably analyzed. To this end, we also argue why each of our assumptions
    is necessary for algorithms based on processing finitely many observations.\r\nWe
    present two solution variants. The first one provides converging lower bounds
    under weaker assumptions than typical ones from previous works concerned with
    guarantees. The second one then utilizes stronger assumptions to additionally
    provide converging upper bounds. Altogether, we obtain an anytime algorithm, i.e.
    yielding a sequence of approximants with known and iteratively improving precision,
    converging to the true value in the limit. Besides, due to the generality of our
    assumptions, our algorithms are very general templates, readily allowing for various
    heuristics from literature in contrast to, e.g., a specific discretization algorithm.
    Our theoretical contribution thus paves the way for future practical improvements
    without sacrificing correctness guarantees."
acknowledgement: "Kush Grover: The author has been supported by the DFG research training
  group GRK\r\n2428 ConVeY.\r\nMaximilian Weininger: The author has been partially
  supported by DFG projects 383882557\r\nStatistical Unbounded Verification (SUV)
  and 427755713 Group-By Objectives in Probabilistic\r\nVerification (GOPro)"
alternative_title:
- LIPIcs
article_number: '11'
article_processing_charge: No
arxiv: 1
author:
- first_name: Kush
  full_name: Grover, Kush
  last_name: Grover
- first_name: Jan
  full_name: Kretinsky, Jan
  id: 44CEF464-F248-11E8-B48F-1D18A9856A87
  last_name: Kretinsky
  orcid: 0000-0002-8122-2881
- first_name: Tobias
  full_name: Meggendorfer, Tobias
  id: b21b0c15-30a2-11eb-80dc-f13ca25802e1
  last_name: Meggendorfer
  orcid: 0000-0002-1712-2165
- first_name: Maimilian
  full_name: Weininger, Maimilian
  last_name: Weininger
citation:
  ama: 'Grover K, Kretinsky J, Meggendorfer T, Weininger M. Anytime guarantees for
    reachability in uncountable Markov decision processes. In: <i>33rd International
    Conference on Concurrency Theory </i>. Vol 243. Schloss Dagstuhl - Leibniz-Zentrum
    für Informatik; 2022. doi:<a href="https://doi.org/10.4230/LIPIcs.CONCUR.2022.11">10.4230/LIPIcs.CONCUR.2022.11</a>'
  apa: 'Grover, K., Kretinsky, J., Meggendorfer, T., &#38; Weininger, M. (2022). Anytime
    guarantees for reachability in uncountable Markov decision processes. In <i>33rd
    International Conference on Concurrency Theory </i> (Vol. 243). Warsaw, Poland:
    Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href="https://doi.org/10.4230/LIPIcs.CONCUR.2022.11">https://doi.org/10.4230/LIPIcs.CONCUR.2022.11</a>'
  chicago: Grover, Kush, Jan Kretinsky, Tobias Meggendorfer, and Maimilian Weininger.
    “Anytime Guarantees for Reachability in Uncountable Markov Decision Processes.”
    In <i>33rd International Conference on Concurrency Theory </i>, Vol. 243. Schloss
    Dagstuhl - Leibniz-Zentrum für Informatik, 2022. <a href="https://doi.org/10.4230/LIPIcs.CONCUR.2022.11">https://doi.org/10.4230/LIPIcs.CONCUR.2022.11</a>.
  ieee: K. Grover, J. Kretinsky, T. Meggendorfer, and M. Weininger, “Anytime guarantees
    for reachability in uncountable Markov decision processes,” in <i>33rd International
    Conference on Concurrency Theory </i>, Warsaw, Poland, 2022, vol. 243.
  ista: 'Grover K, Kretinsky J, Meggendorfer T, Weininger M. 2022. Anytime guarantees
    for reachability in uncountable Markov decision processes. 33rd International
    Conference on Concurrency Theory . CONCUR: Conference on Concurrency Theory, LIPIcs,
    vol. 243, 11.'
  mla: Grover, Kush, et al. “Anytime Guarantees for Reachability in Uncountable Markov
    Decision Processes.” <i>33rd International Conference on Concurrency Theory </i>,
    vol. 243, 11, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022, doi:<a
    href="https://doi.org/10.4230/LIPIcs.CONCUR.2022.11">10.4230/LIPIcs.CONCUR.2022.11</a>.
  short: K. Grover, J. Kretinsky, T. Meggendorfer, M. Weininger, in:, 33rd International
    Conference on Concurrency Theory , Schloss Dagstuhl - Leibniz-Zentrum für Informatik,
    2022.
conference:
  end_date: 2022-09-16
  location: Warsaw, Poland
  name: 'CONCUR: Conference on Concurrency Theory'
  start_date: 2022-09-13
corr_author: '1'
date_created: 2023-03-28T08:09:32Z
date_published: 2022-09-15T00:00:00Z
date_updated: 2024-10-09T21:04:52Z
day: '15'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.4230/LIPIcs.CONCUR.2022.11
external_id:
  arxiv:
  - '2008.04824'
file:
- access_level: open_access
  checksum: e282e43d3ae0ba6e067b72f4583e13c0
  content_type: application/pdf
  creator: dernst
  date_created: 2023-09-26T10:43:15Z
  date_updated: 2023-09-26T10:43:15Z
  file_id: '14372'
  file_name: 2022_LIPIcS_Grover.pdf
  file_size: 960036
  relation: main_file
  success: 1
file_date_updated: 2023-09-26T10:43:15Z
has_accepted_license: '1'
intvolume: '       243'
language:
- iso: eng
license: https://creativecommons.org/licenses/by/4.0/
month: '09'
oa: 1
oa_version: Published Version
publication: '33rd International Conference on Concurrency Theory '
publication_identifier:
  issn:
  - 1868-8969
publication_status: published
publisher: Schloss Dagstuhl - Leibniz-Zentrum für Informatik
quality_controlled: '1'
scopus_import: '1'
status: public
title: Anytime guarantees for reachability in uncountable Markov decision processes
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 243
year: '2022'
...
---
_id: '12776'
abstract:
- lang: eng
  text: An improved asymptotic formula is established for the number of rational points
    of bounded height on the split smooth del Pezzo surface of degree 5. The proof
    uses the five conic bundle structures on the surface.
acknowledgement: This work was begun while the author was participating in the programme
  on "Diophantine equations" at the Hausdorff Research Institute for Mathematics in
  Bonn in 2009. The hospitality and financial support of the institute is gratefully
  acknowledged. The idea of using conic bundles to study the split del Pezzo surface
  of degree 5 was explained to the author by Professor Salberger. The author is very
  grateful to him for his input into this project and also to Shuntaro Yamagishi for
  many useful comments on an earlier version of this manuscript. While working on
  this paper the author was supported by FWF grant P32428-N35.
article_processing_charge: No
article_type: original
author:
- first_name: Timothy D
  full_name: Browning, Timothy D
  id: 35827D50-F248-11E8-B48F-1D18A9856A87
  last_name: Browning
  orcid: 0000-0002-8314-0177
citation:
  ama: Browning TD. Revisiting the Manin–Peyre conjecture for the split del Pezzo
    surface of degree 5. <i>New York Journal of Mathematics</i>. 2022;28:1193-1229.
  apa: Browning, T. D. (2022). Revisiting the Manin–Peyre conjecture for the split
    del Pezzo surface of degree 5. <i>New York Journal of Mathematics</i>. State University
    of New York.
  chicago: Browning, Timothy D. “Revisiting the Manin–Peyre Conjecture for the Split
    Del Pezzo Surface of Degree 5.” <i>New York Journal of Mathematics</i>. State
    University of New York, 2022.
  ieee: T. D. Browning, “Revisiting the Manin–Peyre conjecture for the split del Pezzo
    surface of degree 5,” <i>New York Journal of Mathematics</i>, vol. 28. State University
    of New York, pp. 1193–1229, 2022.
  ista: Browning TD. 2022. Revisiting the Manin–Peyre conjecture for the split del
    Pezzo surface of degree 5. New York Journal of Mathematics. 28, 1193–1229.
  mla: Browning, Timothy D. “Revisiting the Manin–Peyre Conjecture for the Split Del
    Pezzo Surface of Degree 5.” <i>New York Journal of Mathematics</i>, vol. 28, State
    University of New York, 2022, pp. 1193–229.
  short: T.D. Browning, New York Journal of Mathematics 28 (2022) 1193–1229.
corr_author: '1'
date_created: 2023-03-28T09:21:09Z
date_published: 2022-08-24T00:00:00Z
date_updated: 2025-04-15T07:39:01Z
day: '24'
ddc:
- '510'
department:
- _id: TiBr
file:
- access_level: open_access
  checksum: c01e8291794a1bdb7416aa103cb68ef8
  content_type: application/pdf
  creator: dernst
  date_created: 2023-03-30T07:09:35Z
  date_updated: 2023-03-30T07:09:35Z
  file_id: '12778'
  file_name: 2022_NYJM_Browning.pdf
  file_size: 897267
  relation: main_file
  success: 1
file_date_updated: 2023-03-30T07:09:35Z
has_accepted_license: '1'
intvolume: '        28'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: 1193 - 1229
project:
- _id: 26AEDAB2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P32428
  name: New frontiers of the Manin conjecture
publication: New York Journal of Mathematics
publication_identifier:
  issn:
  - 1076-9803
publication_status: published
publisher: State University of New York
quality_controlled: '1'
status: public
title: Revisiting the Manin–Peyre conjecture for the split del Pezzo surface of degree
  5
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 28
year: '2022'
...
---
_id: '12793'
abstract:
- lang: eng
  text: "Let F be a global function field with constant field Fq. Let G be a reductive
    group over Fq. We establish a variant of Arthur's truncated kernel for G and for
    its Lie algebra which generalizes Arthur's original construction. We establish
    a coarse geometric expansion for our variant truncation.\r\nAs applications, we
    consider some existence and uniqueness problems of some cuspidal automorphic representations
    for the functions field of the projective line P1Fq with two points of ramifications."
acknowledgement: 'I’d like to thank Prof. Chaudouard for introducing me to this area.
  I’d like to thank Prof. Harris for asking me the question that makes Section 10
  possible. I’m grateful for the support of Prof. Hausel and IST Austria. The author
  was funded by an ISTplus fellowship: This project has received funding from the
  European Union’s Horizon 2020 research and innovation programme under the Marie
  Skłodowska-Curie Grant Agreement No. 754411.'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Hongjie
  full_name: Yu, Hongjie
  id: 3D7DD9BE-F248-11E8-B48F-1D18A9856A87
  last_name: Yu
  orcid: 0000-0001-5128-7126
citation:
  ama: Yu H.  A coarse geometric expansion of a variant of Arthur’s truncated traces
    and some applications. <i>Pacific Journal of Mathematics</i>. 2022;321(1):193-237.
    doi:<a href="https://doi.org/10.2140/pjm.2022.321.193">10.2140/pjm.2022.321.193</a>
  apa: Yu, H. (2022).  A coarse geometric expansion of a variant of Arthur’s truncated
    traces and some applications. <i>Pacific Journal of Mathematics</i>. Mathematical
    Sciences Publishers. <a href="https://doi.org/10.2140/pjm.2022.321.193">https://doi.org/10.2140/pjm.2022.321.193</a>
  chicago: Yu, Hongjie. “ A Coarse Geometric Expansion of a Variant of Arthur’s Truncated
    Traces and Some Applications.” <i>Pacific Journal of Mathematics</i>. Mathematical
    Sciences Publishers, 2022. <a href="https://doi.org/10.2140/pjm.2022.321.193">https://doi.org/10.2140/pjm.2022.321.193</a>.
  ieee: H. Yu, “ A coarse geometric expansion of a variant of Arthur’s truncated traces
    and some applications,” <i>Pacific Journal of Mathematics</i>, vol. 321, no. 1.
    Mathematical Sciences Publishers, pp. 193–237, 2022.
  ista: Yu H. 2022.  A coarse geometric expansion of a variant of Arthur’s truncated
    traces and some applications. Pacific Journal of Mathematics. 321(1), 193–237.
  mla: Yu, Hongjie. “ A Coarse Geometric Expansion of a Variant of Arthur’s Truncated
    Traces and Some Applications.” <i>Pacific Journal of Mathematics</i>, vol. 321,
    no. 1, Mathematical Sciences Publishers, 2022, pp. 193–237, doi:<a href="https://doi.org/10.2140/pjm.2022.321.193">10.2140/pjm.2022.321.193</a>.
  short: H. Yu, Pacific Journal of Mathematics 321 (2022) 193–237.
corr_author: '1'
date_created: 2023-04-02T22:01:11Z
date_published: 2022-08-29T00:00:00Z
date_updated: 2025-04-14T07:44:01Z
day: '29'
department:
- _id: TaHa
doi: 10.2140/pjm.2022.321.193
ec_funded: 1
external_id:
  arxiv:
  - '2109.10245'
  isi:
  - '000954466300006'
intvolume: '       321'
isi: 1
issue: '1'
keyword:
- Arthur–Selberg trace formula
- cuspidal automorphic representations
- global function fields
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2109.10245
month: '08'
oa: 1
oa_version: Preprint
page: 193-237
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
publication: Pacific Journal of Mathematics
publication_identifier:
  eissn:
  - 1945-5844
  issn:
  - 0030-8730
publication_status: published
publisher: Mathematical Sciences Publishers
quality_controlled: '1'
scopus_import: '1'
status: public
title: ' A coarse geometric expansion of a variant of Arthur''s truncated traces and
  some applications'
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 321
year: '2022'
...
---
_id: '12860'
abstract:
- lang: eng
  text: 'Memorization of the relation between entities in a dataset can lead to privacy
    issues when using a trained model for question answering. We introduce Relational
    Memorization (RM) to understand, quantify and control this phenomenon. While bounding
    general memorization can have detrimental effects on the performance of a trained
    model, bounding RM does not prevent effective learning. The difference is most
    pronounced when the data distribution is long-tailed, with many queries having
    only few training examples: Impeding general memorization prevents effective learning,
    while impeding only relational memorization still allows learning general properties
    of the underlying concepts. We formalize the notion of Relational Privacy (RP)
    and, inspired by Differential Privacy (DP), we provide a possible definition of
    Differential Relational Privacy (DrP). These notions can be used to describe and
    compute bounds on the amount of RM in a trained model. We illustrate Relational
    Privacy concepts in experiments with large-scale models for Question Answering.'
article_number: '2203.16701'
article_processing_charge: No
arxiv: 1
author:
- first_name: Simone
  full_name: Bombari, Simone
  id: ca726dda-de17-11ea-bc14-f9da834f63aa
  last_name: Bombari
- first_name: Alessandro
  full_name: Achille, Alessandro
  last_name: Achille
- first_name: Zijian
  full_name: Wang, Zijian
  last_name: Wang
- first_name: Yu-Xiang
  full_name: Wang, Yu-Xiang
  last_name: Wang
- first_name: Yusheng
  full_name: Xie, Yusheng
  last_name: Xie
- first_name: Kunwar Yashraj
  full_name: Singh, Kunwar Yashraj
  last_name: Singh
- first_name: Srikar
  full_name: Appalaraju, Srikar
  last_name: Appalaraju
- first_name: Vijay
  full_name: Mahadevan, Vijay
  last_name: Mahadevan
- first_name: Stefano
  full_name: Soatto, Stefano
  last_name: Soatto
citation:
  ama: Bombari S, Achille A, Wang Z, et al. Towards differential relational privacy
    and its use in question answering. <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/arXiv.2203.16701">10.48550/arXiv.2203.16701</a>
  apa: Bombari, S., Achille, A., Wang, Z., Wang, Y.-X., Xie, Y., Singh, K. Y., … Soatto,
    S. (n.d.). Towards differential relational privacy and its use in question answering.
    <i>arXiv</i>. <a href="https://doi.org/10.48550/arXiv.2203.16701">https://doi.org/10.48550/arXiv.2203.16701</a>
  chicago: Bombari, Simone, Alessandro Achille, Zijian Wang, Yu-Xiang Wang, Yusheng
    Xie, Kunwar Yashraj Singh, Srikar Appalaraju, Vijay Mahadevan, and Stefano Soatto.
    “Towards Differential Relational Privacy and Its Use in Question Answering.” <i>ArXiv</i>,
    n.d. <a href="https://doi.org/10.48550/arXiv.2203.16701">https://doi.org/10.48550/arXiv.2203.16701</a>.
  ieee: S. Bombari <i>et al.</i>, “Towards differential relational privacy and its
    use in question answering,” <i>arXiv</i>. .
  ista: Bombari S, Achille A, Wang Z, Wang Y-X, Xie Y, Singh KY, Appalaraju S, Mahadevan
    V, Soatto S. Towards differential relational privacy and its use in question answering.
    arXiv, 2203.16701.
  mla: Bombari, Simone, et al. “Towards Differential Relational Privacy and Its Use
    in Question Answering.” <i>ArXiv</i>, 2203.16701, doi:<a href="https://doi.org/10.48550/arXiv.2203.16701">10.48550/arXiv.2203.16701</a>.
  short: S. Bombari, A. Achille, Z. Wang, Y.-X. Wang, Y. Xie, K.Y. Singh, S. Appalaraju,
    V. Mahadevan, S. Soatto, ArXiv (n.d.).
date_created: 2023-04-23T16:11:48Z
date_published: 2022-03-30T00:00:00Z
date_updated: 2023-04-25T07:34:49Z
day: '30'
department:
- _id: GradSch
- _id: MaMo
doi: 10.48550/arXiv.2203.16701
external_id:
  arxiv:
  - '2203.16701'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2203.16701
month: '03'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: submitted
status: public
title: Towards differential relational privacy and its use in question answering
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '12894'
acknowledgement: "The abstracts in this booklet are licenced under a CC BY 4.0 licence
  (https://creativecommons.org/licenses/by/4.0/legalcode), except Markus Wallerberger’s
  contribution at page 21, licenced under a CC BY-SA 4.0 licence (https://creativecommons.org/licenses/by-sa/4.0/legalcode).\r\n"
article_processing_charge: No
author:
- first_name: Alois
  full_name: Schlögl, Alois
  id: 45BF87EE-F248-11E8-B48F-1D18A9856A87
  last_name: Schlögl
  orcid: 0000-0002-5621-8100
- first_name: Andrei
  full_name: Hornoiu, Andrei
  id: 77129392-B450-11EA-8745-D4653DDC885E
  last_name: Hornoiu
- first_name: Stefano
  full_name: Elefante, Stefano
  id: 490F40CE-F248-11E8-B48F-1D18A9856A87
  last_name: Elefante
- first_name: Stephan
  full_name: Stadlbauer, Stephan
  id: 4D0BC184-F248-11E8-B48F-1D18A9856A87
  last_name: Stadlbauer
citation:
  ama: 'Schlögl A, Hornoiu A, Elefante S, Stadlbauer S. Where is the sweet spot? A
    procurement story of general purpose compute nodes. In: <i>ASHPC22 - Austrian-Slovenian
    HPC Meeting 2022</i>. EuroCC Austria c/o Universität Wien; 2022:7. doi:<a href="https://doi.org/10.25365/phaidra.337">10.25365/phaidra.337</a>'
  apa: 'Schlögl, A., Hornoiu, A., Elefante, S., &#38; Stadlbauer, S. (2022). Where
    is the sweet spot? A procurement story of general purpose compute nodes. In <i>ASHPC22
    - Austrian-Slovenian HPC Meeting 2022</i> (p. 7). Grundlsee, Austria: EuroCC Austria
    c/o Universität Wien. <a href="https://doi.org/10.25365/phaidra.337">https://doi.org/10.25365/phaidra.337</a>'
  chicago: Schlögl, Alois, Andrei Hornoiu, Stefano Elefante, and Stephan Stadlbauer.
    “Where Is the Sweet Spot? A Procurement Story of General Purpose Compute Nodes.”
    In <i>ASHPC22 - Austrian-Slovenian HPC Meeting 2022</i>, 7. EuroCC Austria c/o
    Universität Wien, 2022. <a href="https://doi.org/10.25365/phaidra.337">https://doi.org/10.25365/phaidra.337</a>.
  ieee: A. Schlögl, A. Hornoiu, S. Elefante, and S. Stadlbauer, “Where is the sweet
    spot? A procurement story of general purpose compute nodes,” in <i>ASHPC22 - Austrian-Slovenian
    HPC Meeting 2022</i>, Grundlsee, Austria, 2022, p. 7.
  ista: 'Schlögl A, Hornoiu A, Elefante S, Stadlbauer S. 2022. Where is the sweet
    spot? A procurement story of general purpose compute nodes. ASHPC22 - Austrian-Slovenian
    HPC Meeting 2022. ASHPC: Austrian-Slovenian HPC Meeting, 7.'
  mla: Schlögl, Alois, et al. “Where Is the Sweet Spot? A Procurement Story of General
    Purpose Compute Nodes.” <i>ASHPC22 - Austrian-Slovenian HPC Meeting 2022</i>,
    EuroCC Austria c/o Universität Wien, 2022, p. 7, doi:<a href="https://doi.org/10.25365/phaidra.337">10.25365/phaidra.337</a>.
  short: A. Schlögl, A. Hornoiu, S. Elefante, S. Stadlbauer, in:, ASHPC22 - Austrian-Slovenian
    HPC Meeting 2022, EuroCC Austria c/o Universität Wien, 2022, p. 7.
conference:
  end_date: 2022-06-02
  location: Grundlsee, Austria
  name: 'ASHPC: Austrian-Slovenian HPC Meeting'
  start_date: 2022-05-31
corr_author: '1'
date_created: 2023-05-05T09:13:42Z
date_published: 2022-06-02T00:00:00Z
date_updated: 2024-10-09T21:05:24Z
day: '02'
ddc:
- '000'
department:
- _id: ScienComp
doi: 10.25365/phaidra.337
file:
- access_level: open_access
  checksum: e3f8c240b85422ce2190e7b203cc2563
  content_type: application/pdf
  creator: schloegl
  date_created: 2023-05-05T09:06:00Z
  date_updated: 2023-05-05T09:06:00Z
  file_id: '12895'
  file_name: BOOKLET_ASHPC22.pdf
  file_size: 7180531
  relation: main_file
  success: 1
file_date_updated: 2023-05-05T09:06:00Z
has_accepted_license: '1'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: '7'
publication: ASHPC22 - Austrian-Slovenian HPC Meeting 2022
publication_identifier:
  isbn:
  - 978-3-200-08499-5
publication_status: published
publisher: EuroCC Austria c/o Universität Wien
status: public
title: Where is the sweet spot? A procurement story of general purpose compute nodes
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference_abstract
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '12923'
abstract:
- lang: eng
  text: Photoredox-mediated Ni-catalyzed cross-couplings are powerful transformations
    to form carbon–heteroatom bonds and are generally photocatalyzed by noble metal
    complexes. Low-cost and easy-to-prepare carbon dots (CDs) are attractive quasi-homogeneous
    photocatalyst alternatives, but their applicability is limited by their short
    photoluminescence (PL) lifetimes. By tuning the surface and PL properties of CDs,
    we designed colloidal CD nano-photocatalysts for a broad range of Ni-mediated
    cross-couplings between aryl halides and nucleophiles. In particular, a CD decorated
    with amino groups permitted coupling to a wide range of aryl halides and thiols
    under mild, base-free conditions. Mechanistic studies suggested dynamic quenching
    of the CD excited state by the Ni co-catalyst and identified that pyridinium iodide
    (pyHI), a previously used additive in metallaphotocatalyzed cross-couplings, can
    also act as a photocatalyst in such transformations.
article_processing_charge: No
article_type: original
author:
- first_name: Zhouxiang
  full_name: Zhao, Zhouxiang
  last_name: Zhao
- first_name: Bartholomäus
  full_name: Pieber, Bartholomäus
  id: 93e5e5b2-0da6-11ed-8a41-af589a024726
  last_name: Pieber
  orcid: 0000-0001-8689-388X
- first_name: Martina
  full_name: Delbianco, Martina
  last_name: Delbianco
citation:
  ama: Zhao Z, Pieber B, Delbianco M. Modulating the surface and photophysical properties
    of carbon dots to access colloidal photocatalysts for cross-couplings. <i>ACS
    Catalysis</i>. 2022;12(22):13831-13837. doi:<a href="https://doi.org/10.1021/acscatal.2c04025">10.1021/acscatal.2c04025</a>
  apa: Zhao, Z., Pieber, B., &#38; Delbianco, M. (2022). Modulating the surface and
    photophysical properties of carbon dots to access colloidal photocatalysts for
    cross-couplings. <i>ACS Catalysis</i>. American Chemical Society. <a href="https://doi.org/10.1021/acscatal.2c04025">https://doi.org/10.1021/acscatal.2c04025</a>
  chicago: Zhao, Zhouxiang, Bartholomäus Pieber, and Martina Delbianco. “Modulating
    the Surface and Photophysical Properties of Carbon Dots to Access Colloidal Photocatalysts
    for Cross-Couplings.” <i>ACS Catalysis</i>. American Chemical Society, 2022. <a
    href="https://doi.org/10.1021/acscatal.2c04025">https://doi.org/10.1021/acscatal.2c04025</a>.
  ieee: Z. Zhao, B. Pieber, and M. Delbianco, “Modulating the surface and photophysical
    properties of carbon dots to access colloidal photocatalysts for cross-couplings,”
    <i>ACS Catalysis</i>, vol. 12, no. 22. American Chemical Society, pp. 13831–13837,
    2022.
  ista: Zhao Z, Pieber B, Delbianco M. 2022. Modulating the surface and photophysical
    properties of carbon dots to access colloidal photocatalysts for cross-couplings.
    ACS Catalysis. 12(22), 13831–13837.
  mla: Zhao, Zhouxiang, et al. “Modulating the Surface and Photophysical Properties
    of Carbon Dots to Access Colloidal Photocatalysts for Cross-Couplings.” <i>ACS
    Catalysis</i>, vol. 12, no. 22, American Chemical Society, 2022, pp. 13831–37,
    doi:<a href="https://doi.org/10.1021/acscatal.2c04025">10.1021/acscatal.2c04025</a>.
  short: Z. Zhao, B. Pieber, M. Delbianco, ACS Catalysis 12 (2022) 13831–13837.
date_created: 2023-05-08T08:28:54Z
date_published: 2022-10-27T00:00:00Z
date_updated: 2024-10-14T12:07:49Z
day: '27'
doi: 10.1021/acscatal.2c04025
extern: '1'
intvolume: '        12'
issue: '22'
keyword:
- Catalysis
- General Chemistry
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1021/acscatal.2c04025
month: '10'
oa: 1
oa_version: Published Version
page: 13831-13837
publication: ACS Catalysis
publication_identifier:
  eissn:
  - 2155-5435
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Modulating the surface and photophysical properties of carbon dots to access
  colloidal photocatalysts for cross-couplings
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 12
year: '2022'
...
---
_id: '12924'
abstract:
- lang: eng
  text: We demonstrate that several visible-light-mediated carbon−heteroatom cross-coupling
    reactions can be carried out using a photoactive NiII precatalyst that forms in
    situ from a nickel salt and a bipyridine ligand decorated with two carbazole groups
    (Ni(Czbpy)Cl2). The activation of this precatalyst towards cross-coupling reactions
    follows a hitherto undisclosed mechanism that is different from previously reported
    light-responsive nickel complexes that undergo metal-to-ligand charge transfer.
    Theoretical and spectroscopic investigations revealed that irradiation of Ni(Czbpy)Cl2
    with visible light causes an initial intraligand charge transfer event that triggers
    productive catalysis. Ligand polymerization affords a porous, recyclable organic
    polymer for heterogeneous nickel catalysis of cross-coupling reactions. The heterogeneous
    catalyst shows stable performance in a packed-bed flow reactor during a week of
    continuous operation.
article_number: e202211433
article_processing_charge: No
article_type: original
author:
- first_name: Cristian
  full_name: Cavedon, Cristian
  last_name: Cavedon
- first_name: Sebastian
  full_name: Gisbertz, Sebastian
  last_name: Gisbertz
- first_name: Susanne
  full_name: Reischauer, Susanne
  last_name: Reischauer
- first_name: Sarah
  full_name: Vogl, Sarah
  last_name: Vogl
- first_name: Eric
  full_name: Sperlich, Eric
  last_name: Sperlich
- first_name: John H.
  full_name: Burke, John H.
  last_name: Burke
- first_name: Rachel F.
  full_name: Wallick, Rachel F.
  last_name: Wallick
- first_name: Stefanie
  full_name: Schrottke, Stefanie
  last_name: Schrottke
- first_name: Wei‐Hsin
  full_name: Hsu, Wei‐Hsin
  last_name: Hsu
- first_name: Lucia
  full_name: Anghileri, Lucia
  last_name: Anghileri
- first_name: Yannik
  full_name: Pfeifer, Yannik
  last_name: Pfeifer
- first_name: Noah
  full_name: Richter, Noah
  last_name: Richter
- first_name: Christian
  full_name: Teutloff, Christian
  last_name: Teutloff
- first_name: Henrike
  full_name: Müller‐Werkmeister, Henrike
  last_name: Müller‐Werkmeister
- first_name: Dario
  full_name: Cambié, Dario
  last_name: Cambié
- first_name: Peter H.
  full_name: Seeberger, Peter H.
  last_name: Seeberger
- first_name: Josh
  full_name: Vura‐Weis, Josh
  last_name: Vura‐Weis
- first_name: Renske M.
  full_name: van der Veen, Renske M.
  last_name: van der Veen
- first_name: Arne
  full_name: Thomas, Arne
  last_name: Thomas
- first_name: Bartholomäus
  full_name: Pieber, Bartholomäus
  id: 93e5e5b2-0da6-11ed-8a41-af589a024726
  last_name: Pieber
  orcid: 0000-0001-8689-388X
citation:
  ama: Cavedon C, Gisbertz S, Reischauer S, et al. Intraligand charge transfer enables
    visible‐light‐mediated Nickel‐catalyzed cross-coupling reactions. <i>Angewandte
    Chemie International Edition</i>. 2022;61(46). doi:<a href="https://doi.org/10.1002/anie.202211433">10.1002/anie.202211433</a>
  apa: Cavedon, C., Gisbertz, S., Reischauer, S., Vogl, S., Sperlich, E., Burke, J.
    H., … Pieber, B. (2022). Intraligand charge transfer enables visible‐light‐mediated
    Nickel‐catalyzed cross-coupling reactions. <i>Angewandte Chemie International
    Edition</i>. Wiley. <a href="https://doi.org/10.1002/anie.202211433">https://doi.org/10.1002/anie.202211433</a>
  chicago: Cavedon, Cristian, Sebastian Gisbertz, Susanne Reischauer, Sarah Vogl,
    Eric Sperlich, John H. Burke, Rachel F. Wallick, et al. “Intraligand Charge Transfer
    Enables Visible‐light‐mediated Nickel‐catalyzed Cross-Coupling Reactions.” <i>Angewandte
    Chemie International Edition</i>. Wiley, 2022. <a href="https://doi.org/10.1002/anie.202211433">https://doi.org/10.1002/anie.202211433</a>.
  ieee: C. Cavedon <i>et al.</i>, “Intraligand charge transfer enables visible‐light‐mediated
    Nickel‐catalyzed cross-coupling reactions,” <i>Angewandte Chemie International
    Edition</i>, vol. 61, no. 46. Wiley, 2022.
  ista: Cavedon C, Gisbertz S, Reischauer S, Vogl S, Sperlich E, Burke JH, Wallick
    RF, Schrottke S, Hsu W, Anghileri L, Pfeifer Y, Richter N, Teutloff C, Müller‐Werkmeister
    H, Cambié D, Seeberger PH, Vura‐Weis J, van der Veen RM, Thomas A, Pieber B. 2022.
    Intraligand charge transfer enables visible‐light‐mediated Nickel‐catalyzed cross-coupling
    reactions. Angewandte Chemie International Edition. 61(46), e202211433.
  mla: Cavedon, Cristian, et al. “Intraligand Charge Transfer Enables Visible‐light‐mediated
    Nickel‐catalyzed Cross-Coupling Reactions.” <i>Angewandte Chemie International
    Edition</i>, vol. 61, no. 46, e202211433, Wiley, 2022, doi:<a href="https://doi.org/10.1002/anie.202211433">10.1002/anie.202211433</a>.
  short: C. Cavedon, S. Gisbertz, S. Reischauer, S. Vogl, E. Sperlich, J.H. Burke,
    R.F. Wallick, S. Schrottke, W. Hsu, L. Anghileri, Y. Pfeifer, N. Richter, C. Teutloff,
    H. Müller‐Werkmeister, D. Cambié, P.H. Seeberger, J. Vura‐Weis, R.M. van der Veen,
    A. Thomas, B. Pieber, Angewandte Chemie International Edition 61 (2022).
date_created: 2023-05-08T08:30:11Z
date_published: 2022-11-14T00:00:00Z
date_updated: 2024-10-14T12:07:40Z
day: '14'
doi: 10.1002/anie.202211433
extern: '1'
intvolume: '        61'
issue: '46'
keyword:
- General Chemistry
- Catalysis
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1002/anie.202211433
month: '11'
oa: 1
oa_version: Published Version
publication: Angewandte Chemie International Edition
publication_identifier:
  eissn:
  - 1521-3773
  issn:
  - 1433-7851
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Intraligand charge transfer enables visible‐light‐mediated Nickel‐catalyzed
  cross-coupling reactions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 61
year: '2022'
...
---
_id: '12938'
abstract:
- lang: eng
  text: In this work, a feed-forward artificial neural network (FF-ANN) design capable
    of locating eigensolutions to Schrödinger's equation via self-supervised learning
    is outlined. Based on the input potential determining the nature of the quantum
    problem, the presented FF-ANN strategy identifies valid solutions solely by minimizing
    Schrödinger's equation encoded in a suitably designed global loss function. In
    addition to benchmark calculations of prototype systems with known analytical
    solutions, the outlined methodology was also applied to experimentally accessible
    quantum systems, such as the vibrational states of molecular hydrogen H2 and its
    isotopologues HD and D2 as well as the torsional tunnel splitting in the phenol
    molecule. It is shown that in conjunction with the use of SIREN activation functions
    a high accuracy in the energy eigenvalues and wavefunctions is achieved without
    the requirement to adjust the implementation to the vastly different range of
    input potentials, thereby even considering problems under periodic boundary conditions.
article_processing_charge: No
article_type: original
author:
- first_name: Jakob
  full_name: Gamper, Jakob
  last_name: Gamper
- first_name: Florian
  full_name: Kluibenschedl, Florian
  id: 7499e70e-eb2c-11ec-b98b-f925648bc9d9
  last_name: Kluibenschedl
- first_name: Alexander K. H.
  full_name: Weiss, Alexander K. H.
  last_name: Weiss
- first_name: Thomas S.
  full_name: Hofer, Thomas S.
  last_name: Hofer
citation:
  ama: Gamper J, Kluibenschedl F, Weiss AKH, Hofer TS. From vibrational spectroscopy
    and quantum tunnelling to periodic band structures – a self-supervised, all-purpose
    neural network approach to general quantum problems. <i>Physical Chemistry Chemical
    Physics</i>. 2022;24(41):25191-25202. doi:<a href="https://doi.org/10.1039/d2cp03921d">10.1039/d2cp03921d</a>
  apa: Gamper, J., Kluibenschedl, F., Weiss, A. K. H., &#38; Hofer, T. S. (2022).
    From vibrational spectroscopy and quantum tunnelling to periodic band structures
    – a self-supervised, all-purpose neural network approach to general quantum problems.
    <i>Physical Chemistry Chemical Physics</i>. Royal Society of Chemistry. <a href="https://doi.org/10.1039/d2cp03921d">https://doi.org/10.1039/d2cp03921d</a>
  chicago: Gamper, Jakob, Florian Kluibenschedl, Alexander K. H. Weiss, and Thomas
    S. Hofer. “From Vibrational Spectroscopy and Quantum Tunnelling to Periodic Band
    Structures – a Self-Supervised, All-Purpose Neural Network Approach to General
    Quantum Problems.” <i>Physical Chemistry Chemical Physics</i>. Royal Society of
    Chemistry, 2022. <a href="https://doi.org/10.1039/d2cp03921d">https://doi.org/10.1039/d2cp03921d</a>.
  ieee: J. Gamper, F. Kluibenschedl, A. K. H. Weiss, and T. S. Hofer, “From vibrational
    spectroscopy and quantum tunnelling to periodic band structures – a self-supervised,
    all-purpose neural network approach to general quantum problems,” <i>Physical
    Chemistry Chemical Physics</i>, vol. 24, no. 41. Royal Society of Chemistry, pp.
    25191–25202, 2022.
  ista: Gamper J, Kluibenschedl F, Weiss AKH, Hofer TS. 2022. From vibrational spectroscopy
    and quantum tunnelling to periodic band structures – a self-supervised, all-purpose
    neural network approach to general quantum problems. Physical Chemistry Chemical
    Physics. 24(41), 25191–25202.
  mla: Gamper, Jakob, et al. “From Vibrational Spectroscopy and Quantum Tunnelling
    to Periodic Band Structures – a Self-Supervised, All-Purpose Neural Network Approach
    to General Quantum Problems.” <i>Physical Chemistry Chemical Physics</i>, vol.
    24, no. 41, Royal Society of Chemistry, 2022, pp. 25191–202, doi:<a href="https://doi.org/10.1039/d2cp03921d">10.1039/d2cp03921d</a>.
  short: J. Gamper, F. Kluibenschedl, A.K.H. Weiss, T.S. Hofer, Physical Chemistry
    Chemical Physics 24 (2022) 25191–25202.
date_created: 2023-05-10T14:48:46Z
date_published: 2022-10-04T00:00:00Z
date_updated: 2023-05-15T07:54:08Z
day: '04'
doi: 10.1039/d2cp03921d
extern: '1'
external_id:
  pmid:
  - '36254856'
intvolume: '        24'
issue: '41'
keyword:
- Physical and Theoretical Chemistry
- General Physics and Astronomy
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1039/D2CP03921D
month: '10'
oa: 1
oa_version: Published Version
page: 25191-25202
pmid: 1
publication: Physical Chemistry Chemical Physics
publication_identifier:
  issn:
  - 1463-9076
  - 1463-9084
publication_status: published
publisher: Royal Society of Chemistry
quality_controlled: '1'
scopus_import: '1'
status: public
title: From vibrational spectroscopy and quantum tunnelling to periodic band structures
  – a self-supervised, all-purpose neural network approach to general quantum problems
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 24
year: '2022'
...
---
_id: '13064'
abstract:
- lang: eng
  text: Genetically informed, deep-phenotyped biobanks are an important research resource
    and it is imperative that the most powerful, versatile, and efficient analysis
    approaches are used. Here, we apply our recently developed Bayesian grouped mixture
    of regressions model (GMRM) in the UK and Estonian Biobanks and obtain the highest
    genomic prediction accuracy reported to date across 21 heritable traits. When
    compared to other approaches, GMRM accuracy was greater than annotation prediction
    models run in the LDAK or LDPred-funct software by 15% (SE 7%) and 14% (SE 2%),
    respectively, and was 18% (SE 3%) greater than a baseline BayesR model without
    single-nucleotide polymorphism (SNP) markers grouped into minor allele frequency–linkage
    disequilibrium (MAF-LD) annotation categories. For height, the prediction accuracy
    R 2 was 47% in a UK Biobank holdout sample, which was 76% of the estimated h SNP
    2 . We then extend our GMRM prediction model to provide mixed-linear model association
    (MLMA) SNP marker estimates for genome-wide association (GWAS) discovery, which
    increased the independent loci detected to 16,162 in unrelated UK Biobank individuals,
    compared to 10,550 from BoltLMM and 10,095 from Regenie, a 62 and 65% increase,
    respectively. The average χ2 value of the leading markers increased by 15.24 (SE
    0.41) for every 1% increase in prediction accuracy gained over a baseline BayesR
    model across the traits. Thus, we show that modeling genetic associations accounting
    for MAF and LD differences among SNP markers, and incorporating prior knowledge
    of genomic function, is important for both genomic prediction and discovery in
    large-scale individual-level studies.
article_processing_charge: No
author:
- first_name: Etienne
  full_name: Orliac, Etienne
  last_name: Orliac
- first_name: Daniel
  full_name: Trejo Banos, Daniel
  last_name: Trejo Banos
- first_name: Sven
  full_name: Ojavee, Sven
  last_name: Ojavee
- first_name: Kristi
  full_name: Läll, Kristi
  last_name: Läll
- first_name: Reedik
  full_name: Mägi, Reedik
  last_name: Mägi
- first_name: Peter
  full_name: Visscher, Peter
  last_name: Visscher
- first_name: Matthew Richard
  full_name: Robinson, Matthew Richard
  id: E5D42276-F5DA-11E9-8E24-6303E6697425
  last_name: Robinson
  orcid: 0000-0001-8982-8813
citation:
  ama: Orliac E, Trejo Banos D, Ojavee S, et al. Improving genome-wide association
    discovery and genomic prediction accuracy in biobank data. 2022. doi:<a href="https://doi.org/10.5061/DRYAD.GTHT76HMZ">10.5061/DRYAD.GTHT76HMZ</a>
  apa: Orliac, E., Trejo Banos, D., Ojavee, S., Läll, K., Mägi, R., Visscher, P.,
    &#38; Robinson, M. R. (2022). Improving genome-wide association discovery and
    genomic prediction accuracy in biobank data. Dryad. <a href="https://doi.org/10.5061/DRYAD.GTHT76HMZ">https://doi.org/10.5061/DRYAD.GTHT76HMZ</a>
  chicago: Orliac, Etienne, Daniel Trejo Banos, Sven Ojavee, Kristi Läll, Reedik Mägi,
    Peter Visscher, and Matthew Richard Robinson. “Improving Genome-Wide Association
    Discovery and Genomic Prediction Accuracy in Biobank Data.” Dryad, 2022. <a href="https://doi.org/10.5061/DRYAD.GTHT76HMZ">https://doi.org/10.5061/DRYAD.GTHT76HMZ</a>.
  ieee: E. Orliac <i>et al.</i>, “Improving genome-wide association discovery and
    genomic prediction accuracy in biobank data.” Dryad, 2022.
  ista: Orliac E, Trejo Banos D, Ojavee S, Läll K, Mägi R, Visscher P, Robinson MR.
    2022. Improving genome-wide association discovery and genomic prediction accuracy
    in biobank data, Dryad, <a href="https://doi.org/10.5061/DRYAD.GTHT76HMZ">10.5061/DRYAD.GTHT76HMZ</a>.
  mla: Orliac, Etienne, et al. <i>Improving Genome-Wide Association Discovery and
    Genomic Prediction Accuracy in Biobank Data</i>. Dryad, 2022, doi:<a href="https://doi.org/10.5061/DRYAD.GTHT76HMZ">10.5061/DRYAD.GTHT76HMZ</a>.
  short: E. Orliac, D. Trejo Banos, S. Ojavee, K. Läll, R. Mägi, P. Visscher, M.R.
    Robinson, (2022).
corr_author: '1'
date_created: 2023-05-23T16:28:13Z
date_published: 2022-09-02T00:00:00Z
date_updated: 2025-06-12T06:22:36Z
day: '02'
ddc:
- '570'
department:
- _id: MaRo
doi: 10.5061/DRYAD.GTHT76HMZ
license: https://creativecommons.org/publicdomain/zero/1.0/
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5061/dryad.gtht76hmz
month: '09'
oa: 1
oa_version: Published Version
publisher: Dryad
related_material:
  record:
  - id: '11733'
    relation: used_in_publication
    status: public
status: public
title: Improving genome-wide association discovery and genomic prediction accuracy
  in biobank data
tmp:
  image: /images/cc_0.png
  legal_code_url: https://creativecommons.org/publicdomain/zero/1.0/legalcode
  name: Creative Commons Public Domain Dedication (CC0 1.0)
  short: CC0 (1.0)
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '13066'
abstract:
- lang: eng
  text: Chromosomal inversions have been shown to play a major role in local adaptation
    by suppressing recombination between alternative arrangements and maintaining
    beneficial allele combinations. However, so far, their importance relative to
    the remaining genome remains largely unknown. Understanding the genetic architecture
    of adaptation requires better estimates of how loci of different effect sizes
    contribute to phenotypic variation. Here, we used three Swedish islands where
    the marine snail Littorina saxatilis has repeatedly evolved into two distinct
    ecotypes along a habitat transition. We estimated the contribution of inversion
    polymorphisms to phenotypic divergence while controlling for polygenic effects
    in the remaining genome using a quantitative genetics framework. We confirmed
    the importance of inversions but showed that contributions of loci outside inversions
    are of similar magnitude, with variable proportions dependent on the trait and
    the population. Some inversions showed consistent effects across all sites, whereas
    others exhibited site-specific effects, indicating that the genomic basis for
    replicated phenotypic divergence is only partly shared. The contributions of sexual
    dimorphism as well as environmental factors to phenotypic variation were significant
    but minor compared to inversions and polygenic background. Overall, this integrated
    approach provides insight into the multiple mechanisms contributing to parallel
    phenotypic divergence.
article_processing_charge: No
author:
- first_name: Eva
  full_name: Koch, Eva
  last_name: Koch
- first_name: Mark
  full_name: Ravinet, Mark
  last_name: Ravinet
- first_name: Anja M
  full_name: Westram, Anja M
  id: 3C147470-F248-11E8-B48F-1D18A9856A87
  last_name: Westram
  orcid: 0000-0003-1050-4969
- first_name: Kerstin
  full_name: Jonannesson, Kerstin
  last_name: Jonannesson
- first_name: Roger
  full_name: Butlin, Roger
  last_name: Butlin
citation:
  ama: 'Koch E, Ravinet M, Westram AM, Jonannesson K, Butlin R. Data from: Genetic
    architecture of repeated phenotypic divergence in Littorina saxatilis ecotype
    evolution. 2022. doi:<a href="https://doi.org/10.5061/DRYAD.M905QFV4B">10.5061/DRYAD.M905QFV4B</a>'
  apa: 'Koch, E., Ravinet, M., Westram, A. M., Jonannesson, K., &#38; Butlin, R. (2022).
    Data from: Genetic architecture of repeated phenotypic divergence in Littorina
    saxatilis ecotype evolution. Dryad. <a href="https://doi.org/10.5061/DRYAD.M905QFV4B">https://doi.org/10.5061/DRYAD.M905QFV4B</a>'
  chicago: 'Koch, Eva, Mark Ravinet, Anja M Westram, Kerstin Jonannesson, and Roger
    Butlin. “Data from: Genetic Architecture of Repeated Phenotypic Divergence in
    Littorina Saxatilis Ecotype Evolution.” Dryad, 2022. <a href="https://doi.org/10.5061/DRYAD.M905QFV4B">https://doi.org/10.5061/DRYAD.M905QFV4B</a>.'
  ieee: 'E. Koch, M. Ravinet, A. M. Westram, K. Jonannesson, and R. Butlin, “Data
    from: Genetic architecture of repeated phenotypic divergence in Littorina saxatilis
    ecotype evolution.” Dryad, 2022.'
  ista: 'Koch E, Ravinet M, Westram AM, Jonannesson K, Butlin R. 2022. Data from:
    Genetic architecture of repeated phenotypic divergence in Littorina saxatilis
    ecotype evolution, Dryad, <a href="https://doi.org/10.5061/DRYAD.M905QFV4B">10.5061/DRYAD.M905QFV4B</a>.'
  mla: 'Koch, Eva, et al. <i>Data from: Genetic Architecture of Repeated Phenotypic
    Divergence in Littorina Saxatilis Ecotype Evolution</i>. Dryad, 2022, doi:<a href="https://doi.org/10.5061/DRYAD.M905QFV4B">10.5061/DRYAD.M905QFV4B</a>.'
  short: E. Koch, M. Ravinet, A.M. Westram, K. Jonannesson, R. Butlin, (2022).
date_created: 2023-05-23T16:33:12Z
date_published: 2022-07-28T00:00:00Z
date_updated: 2023-08-04T09:42:10Z
day: '28'
ddc:
- '570'
department:
- _id: NiBa
doi: 10.5061/DRYAD.M905QFV4B
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5061/dryad.m905qfv4b
month: '07'
oa: 1
oa_version: Published Version
publisher: Dryad
related_material:
  record:
  - id: '12247'
    relation: used_in_publication
    status: public
status: public
title: 'Data from: Genetic architecture of repeated phenotypic divergence in Littorina
  saxatilis ecotype evolution'
tmp:
  image: /images/cc_0.png
  legal_code_url: https://creativecommons.org/publicdomain/zero/1.0/legalcode
  name: Creative Commons Public Domain Dedication (CC0 1.0)
  short: CC0 (1.0)
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
