---
OA_place: repository
OA_type: gold
_id: '21668'
abstract:
- lang: eng
  text: "This artifact allows to review and reproduce the experiments from the paper
    *A Revised Practitioner's Guide to MDP Model Checking Algorithms*.\r\nThe package
    contains all original logfiles and derived data used to generate the plots as
    in the paper. Furthermore, the artifact contains the model checking tools `Storm`
    and `mcsta` in the version exercised in the paper, the used Docker container,
    as well as benchmark instances and execution scripts to reproduce the experiments.\r\n\r\nSee
    also the artifact of the conference paper: https://zenodo.org/records/7509474"
article_processing_charge: No
author:
- first_name: Arnd
  full_name: Hartmanns, Arnd
  last_name: Hartmanns
- first_name: Sebastian
  full_name: Junges, Sebastian
  last_name: Junges
- first_name: Tim
  full_name: Quatmann, Tim
  last_name: Quatmann
- first_name: Maximilian
  full_name: Weininger, Maximilian
  id: 02ab0197-cc70-11ed-ab61-918e71f56881
  last_name: Weininger
  orcid: 0000-0002-0163-2152
citation:
  ama: Hartmanns A, Junges S, Quatmann T, Weininger M. Benchmark data for the revised
    practitioner’s guide to MDP model checking algorithms. 2025. doi:<a href="https://doi.org/10.5281/ZENODO.14500423">10.5281/ZENODO.14500423</a>
  apa: Hartmanns, A., Junges, S., Quatmann, T., &#38; Weininger, M. (2025). Benchmark
    data for the revised practitioner’s guide to MDP model checking algorithms. Zenodo.
    <a href="https://doi.org/10.5281/ZENODO.14500423">https://doi.org/10.5281/ZENODO.14500423</a>
  chicago: Hartmanns, Arnd, Sebastian Junges, Tim Quatmann, and Maximilian Weininger.
    “Benchmark Data for the Revised Practitioner’s Guide to MDP Model Checking Algorithms.”
    Zenodo, 2025. <a href="https://doi.org/10.5281/ZENODO.14500423">https://doi.org/10.5281/ZENODO.14500423</a>.
  ieee: A. Hartmanns, S. Junges, T. Quatmann, and M. Weininger, “Benchmark data for
    the revised practitioner’s guide to MDP model checking algorithms.” Zenodo, 2025.
  ista: Hartmanns A, Junges S, Quatmann T, Weininger M. 2025. Benchmark data for the
    revised practitioner’s guide to MDP model checking algorithms, Zenodo, <a href="https://doi.org/10.5281/ZENODO.14500423">10.5281/ZENODO.14500423</a>.
  mla: Hartmanns, Arnd, et al. <i>Benchmark Data for the Revised Practitioner’s Guide
    to MDP Model Checking Algorithms</i>. Zenodo, 2025, doi:<a href="https://doi.org/10.5281/ZENODO.14500423">10.5281/ZENODO.14500423</a>.
  short: A. Hartmanns, S. Junges, T. Quatmann, M. Weininger, (2025).
date_created: 2026-04-07T09:47:22Z
date_published: 2025-03-07T00:00:00Z
date_updated: 2026-04-07T09:52:55Z
day: '07'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.5281/ZENODO.14500423
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5281/ZENODO.14500423
month: '03'
oa: 1
oa_version: Published Version
publisher: Zenodo
related_material:
  record:
  - id: '21661'
    relation: used_for_analysis_in
    status: public
status: public
title: Benchmark data for the revised practitioner's guide to MDP model checking algorithms
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '21693'
abstract:
- lang: eng
  text: We propose an approach to integrated optical spectral filtering that allows
    arbitrary programmability, can compensate automatically for imperfections in filter
    fabrication, allows multiple simultaneous and separately programmable filter functions
    on the same input, and can configure itself automatically to the problem of interest,
    for example to filter or reject multiple arbitrarily chosen frequencies. The approach
    exploits splitting the input light into an array of multiple waveguides of different
    lengths that then feed a programmable interferometer array that can also self-configure.
    It can give spectral response similar to arrayed waveguide gratings but offers
    many other filtering functions, as well as supporting other structures based on
    non-redundant arrays for precise spectral filtering. Simultaneous filtering also
    allows, for the first time to our knowledge, an automatic measurement of the temporal
    coherency matrix and physical separation into the Karhunen-Loève expansion of
    temporally partially coherent light fields.
article_number: '2501.11811'
article_processing_charge: No
arxiv: 1
author:
- first_name: David A. B.
  full_name: Miller, David A. B.
  last_name: Miller
- first_name: Charles
  full_name: Roques-Carmes, Charles
  id: e2e68fc9-6505-11ef-a541-eb4e72cc3e82
  last_name: Roques-Carmes
- first_name: Carson G.
  full_name: Valdez, Carson G.
  last_name: Valdez
- first_name: Anne R.
  full_name: Kroo, Anne R.
  last_name: Kroo
- first_name: Marek
  full_name: Vlk, Marek
  last_name: Vlk
- first_name: Shanhui
  full_name: Fan, Shanhui
  last_name: Fan
- first_name: Olav
  full_name: Solgaard, Olav
  last_name: Solgaard
citation:
  ama: Miller DAB, Roques-Carmes C, Valdez CG, et al. Universal programmable and self-configuring
    optical filter. <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/arXiv.2501.11811">10.48550/arXiv.2501.11811</a>
  apa: Miller, D. A. B., Roques-Carmes, C., Valdez, C. G., Kroo, A. R., Vlk, M., Fan,
    S., &#38; Solgaard, O. (n.d.). Universal programmable and self-configuring optical
    filter. <i>arXiv</i>. <a href="https://doi.org/10.48550/arXiv.2501.11811">https://doi.org/10.48550/arXiv.2501.11811</a>
  chicago: Miller, David A. B., Charles Roques-Carmes, Carson G. Valdez, Anne R. Kroo,
    Marek Vlk, Shanhui Fan, and Olav Solgaard. “Universal Programmable and Self-Configuring
    Optical Filter.” <i>ArXiv</i>, n.d. <a href="https://doi.org/10.48550/arXiv.2501.11811">https://doi.org/10.48550/arXiv.2501.11811</a>.
  ieee: D. A. B. Miller <i>et al.</i>, “Universal programmable and self-configuring
    optical filter,” <i>arXiv</i>. .
  ista: Miller DAB, Roques-Carmes C, Valdez CG, Kroo AR, Vlk M, Fan S, Solgaard O.
    Universal programmable and self-configuring optical filter. arXiv, 2501.11811.
  mla: Miller, David A. B., et al. “Universal Programmable and Self-Configuring Optical
    Filter.” <i>ArXiv</i>, 2501.11811, doi:<a href="https://doi.org/10.48550/arXiv.2501.11811">10.48550/arXiv.2501.11811</a>.
  short: D.A.B. Miller, C. Roques-Carmes, C.G. Valdez, A.R. Kroo, M. Vlk, S. Fan,
    O. Solgaard, ArXiv (n.d.).
date_created: 2026-04-09T09:10:41Z
date_published: 2025-01-21T00:00:00Z
date_updated: 2026-04-13T11:04:49Z
day: '21'
doi: 10.48550/arXiv.2501.11811
extern: '1'
external_id:
  arxiv:
  - '2501.11811'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2501.11811
month: '01'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: submitted
scopus_import: '1'
status: public
title: Universal programmable and self-configuring optical filter
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '21694'
abstract:
- lang: eng
  text: In X-ray tubes, more than 99% of the kilowatts of power supplied to generate
    X-rays via bremsstrahlung are lost in the form of heat generation in the anode.
    Therefore, thermal management is a critical barrier to the development of more
    powerful X-ray tubes with higher brightness and spatial coherence, which are needed
    to translate imaging modalities such as phase-contrast imaging to the clinic.
    In rotating anode X-ray tubes, the most common design, thermal radiation is a
    bottleneck that prevents efficient cooling of the anode$\unicode{x2014}$the hottest
    part of the device by far. We predict that nanophotonically patterning the anode
    of an X-ray tube enhances heat dissipation via thermal radiation, enabling it
    to operate at higher powers without increasing in temperature. The focal spot
    size, which is related to the spatial coherence of generated X-rays, can also
    be made smaller at a constant temperature. A major advantage of our "nanophotonic
    thermal management" approach is that in principle, it allows for complete control
    over the spectrum and direction of thermal radiation, which can lead to optimal
    thermal routing and improved performance.
article_number: '2503.20946'
article_processing_charge: No
arxiv: 1
author:
- first_name: Simo
  full_name: Pajovic, Simo
  last_name: Pajovic
- first_name: Charles
  full_name: Roques-Carmes, Charles
  id: e2e68fc9-6505-11ef-a541-eb4e72cc3e82
  last_name: Roques-Carmes
- first_name: Seou
  full_name: Choi, Seou
  last_name: Choi
- first_name: Steven E.
  full_name: Kooi, Steven E.
  last_name: Kooi
- first_name: Rajiv
  full_name: Gupta, Rajiv
  last_name: Gupta
- first_name: Michael E.
  full_name: Zalis, Michael E.
  last_name: Zalis
- first_name: Ivan
  full_name: Čelanović, Ivan
  last_name: Čelanović
- first_name: Marin
  full_name: Soljačić, Marin
  last_name: Soljačić
citation:
  ama: Pajovic S, Roques-Carmes C, Choi S, et al. Nanophotonic thermal management
    in X-ray tubes. <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/arXiv.2503.20946">10.48550/arXiv.2503.20946</a>
  apa: Pajovic, S., Roques-Carmes, C., Choi, S., Kooi, S. E., Gupta, R., Zalis, M.
    E., … Soljačić, M. (n.d.). Nanophotonic thermal management in X-ray tubes. <i>arXiv</i>.
    <a href="https://doi.org/10.48550/arXiv.2503.20946">https://doi.org/10.48550/arXiv.2503.20946</a>
  chicago: Pajovic, Simo, Charles Roques-Carmes, Seou Choi, Steven E. Kooi, Rajiv
    Gupta, Michael E. Zalis, Ivan Čelanović, and Marin Soljačić. “Nanophotonic Thermal
    Management in X-Ray Tubes.” <i>ArXiv</i>, n.d. <a href="https://doi.org/10.48550/arXiv.2503.20946">https://doi.org/10.48550/arXiv.2503.20946</a>.
  ieee: S. Pajovic <i>et al.</i>, “Nanophotonic thermal management in X-ray tubes,”
    <i>arXiv</i>. .
  ista: Pajovic S, Roques-Carmes C, Choi S, Kooi SE, Gupta R, Zalis ME, Čelanović
    I, Soljačić M. Nanophotonic thermal management in X-ray tubes. arXiv, 2503.20946.
  mla: Pajovic, Simo, et al. “Nanophotonic Thermal Management in X-Ray Tubes.” <i>ArXiv</i>,
    2503.20946, doi:<a href="https://doi.org/10.48550/arXiv.2503.20946">10.48550/arXiv.2503.20946</a>.
  short: S. Pajovic, C. Roques-Carmes, S. Choi, S.E. Kooi, R. Gupta, M.E. Zalis, I.
    Čelanović, M. Soljačić, ArXiv (n.d.).
date_created: 2026-04-09T09:10:41Z
date_published: 2025-03-26T00:00:00Z
date_updated: 2026-04-13T11:02:19Z
day: '26'
doi: 10.48550/arXiv.2503.20946
extern: '1'
external_id:
  arxiv:
  - '2503.20946'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2503.20946
month: '03'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: submitted
scopus_import: '1'
status: public
title: Nanophotonic thermal management in X-ray tubes
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '21695'
abstract:
- lang: eng
  text: Scattering experiments with energetic particles, such as free electrons, have
    been historically used to reveal the quantum structure of matter. However, realizing
    coherent interactions between free-electron beams and solid-state quantum systems
    has remained out of reach, owing to their intrinsically weak coupling. Realizing
    such coherent control would open up opportunities for hybrid quantum platforms
    combining free electrons and solid-state qubits for coincident quantum information
    processing and nanoscale sensing. Here, we present a framework that employs negatively
    charged nitrogen-vacancy centers (NV-) in diamond as quantum sensors of a bunched
    electron beam. We develop a Lindblad master equation description of the magnetic
    free-electron--qubit interactions and identify spin relaxometry as a sensitive
    probe of the interaction. Experimentally, we integrate a confocal fluorescence
    microscopy setup into a microwave-bunched electron beam line. We monitor charge-state
    dynamics and assess their impact on key sensing performance metrics (such as spin
    readout contrast), defining safe operating parameters for quantum sensing experiments.
    By performing $T_1$ relaxometry under controlled electron beam exposure, we establish
    an upper bound on the free-electron--spin coupling strength. Our results establish
    NV- centers as quantitative probes of free electrons, providing a metrological
    benchmark for free-electron--qubit coupling under realistic conditions, and chart
    a route toward solid-state quantum control with electron beams.
article_number: '2508.13112'
article_processing_charge: No
arxiv: 1
author:
- first_name: Jakob M.
  full_name: Grzesik, Jakob M.
  last_name: Grzesik
- first_name: Dominic
  full_name: Catanzaro, Dominic
  last_name: Catanzaro
- first_name: Charles
  full_name: Roques-Carmes, Charles
  id: e2e68fc9-6505-11ef-a541-eb4e72cc3e82
  last_name: Roques-Carmes
- first_name: Eric I.
  full_name: Rosenthal, Eric I.
  last_name: Rosenthal
- first_name: Guido L. van de
  full_name: Stolpe, Guido L. van de
  last_name: Stolpe
- first_name: Aviv
  full_name: Karnieli, Aviv
  last_name: Karnieli
- first_name: Giovanni
  full_name: Scuri, Giovanni
  last_name: Scuri
- first_name: Souvik
  full_name: Biswas, Souvik
  last_name: Biswas
- first_name: Kenneth J.
  full_name: Leedle, Kenneth J.
  last_name: Leedle
- first_name: Dylan S.
  full_name: Black, Dylan S.
  last_name: Black
- first_name: Robert L.
  full_name: Byer, Robert L.
  last_name: Byer
- first_name: Ido
  full_name: Kaminer, Ido
  last_name: Kaminer
- first_name: R. Joel
  full_name: England, R. Joel
  last_name: England
- first_name: Shanhui
  full_name: Fan, Shanhui
  last_name: Fan
- first_name: Olav
  full_name: Solgaard, Olav
  last_name: Solgaard
- first_name: Jelena
  full_name: Vučković, Jelena
  last_name: Vučković
citation:
  ama: Grzesik JM, Catanzaro D, Roques-Carmes C, et al. Quantum sensing of electron
    beams using solid-state spins. <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/arXiv.2508.13112">10.48550/arXiv.2508.13112</a>
  apa: Grzesik, J. M., Catanzaro, D., Roques-Carmes, C., Rosenthal, E. I., Stolpe,
    G. L. van de, Karnieli, A., … Vučković, J. (n.d.). Quantum sensing of electron
    beams using solid-state spins. <i>arXiv</i>. <a href="https://doi.org/10.48550/arXiv.2508.13112">https://doi.org/10.48550/arXiv.2508.13112</a>
  chicago: Grzesik, Jakob M., Dominic Catanzaro, Charles Roques-Carmes, Eric I. Rosenthal,
    Guido L. van de Stolpe, Aviv Karnieli, Giovanni Scuri, et al. “Quantum Sensing
    of Electron Beams Using Solid-State Spins.” <i>ArXiv</i>, n.d. <a href="https://doi.org/10.48550/arXiv.2508.13112">https://doi.org/10.48550/arXiv.2508.13112</a>.
  ieee: J. M. Grzesik <i>et al.</i>, “Quantum sensing of electron beams using solid-state
    spins,” <i>arXiv</i>. .
  ista: Grzesik JM, Catanzaro D, Roques-Carmes C, Rosenthal EI, Stolpe GL van de,
    Karnieli A, Scuri G, Biswas S, Leedle KJ, Black DS, Byer RL, Kaminer I, England
    RJ, Fan S, Solgaard O, Vučković J. Quantum sensing of electron beams using solid-state
    spins. arXiv, 2508.13112.
  mla: Grzesik, Jakob M., et al. “Quantum Sensing of Electron Beams Using Solid-State
    Spins.” <i>ArXiv</i>, 2508.13112, doi:<a href="https://doi.org/10.48550/arXiv.2508.13112">10.48550/arXiv.2508.13112</a>.
  short: J.M. Grzesik, D. Catanzaro, C. Roques-Carmes, E.I. Rosenthal, G.L. van de
    Stolpe, A. Karnieli, G. Scuri, S. Biswas, K.J. Leedle, D.S. Black, R.L. Byer,
    I. Kaminer, R.J. England, S. Fan, O. Solgaard, J. Vučković, ArXiv (n.d.).
date_created: 2026-04-09T09:10:41Z
date_published: 2025-08-18T00:00:00Z
date_updated: 2026-04-13T09:49:00Z
day: '18'
doi: 10.48550/arXiv.2508.13112
extern: '1'
external_id:
  arxiv:
  - '2508.13112'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2508.13112
month: '08'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: submitted
scopus_import: '1'
status: public
title: Quantum sensing of electron beams using solid-state spins
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '21696'
abstract:
- lang: eng
  text: We demonstrate an integrated photonic circuit based on feed forward photonic
    meshes that can be programmed and reconfigured to perform arbitrary spectral filter
    functions. We investigate a subset of the available filter functions, demonstrating
    that a N = 4 input triangular mesh with M = 3 layers may be operated via self-configuration
    algorithms to filter M arbitrary wavelengths from a given input spectrum. The
    tunable nature of the architecture enables preconfigured filter functions to be
    swept in the spectral domain continuously over the free spectral range of the
    device. This removes any strict requirements between the design parameters of
    the architecture and the center wavelength of a desired filter function. With
    this architecture, we experimentally demonstrate arbitrary wavelength rejection
    filters with contrasts as deep as 40 dB. Further, by intentionally selecting the
    center wavelengths of each filter function to lie along a wavelength grid we demonstrate
    deep wavelength division demultiplexing (DWDM) with inter-channel crosstalk between
    -25 dB and -40 dB. Unlike typical DWDM systems, in this architecture the center
    wavelength of each channel is not fixed at fabrication and instead may be swept
    or reordered arbitrarily. This device demonstrates advantages over typical methods
    for DWDM, Raman spectroscopy, and correlation spectroscopy as well as other applications.
article_number: '2509.12059'
article_processing_charge: No
arxiv: 1
author:
- first_name: Carson G.
  full_name: Valdez, Carson G.
  last_name: Valdez
- first_name: Anne R.
  full_name: Kroo, Anne R.
  last_name: Kroo
- first_name: Marek
  full_name: Vlk, Marek
  last_name: Vlk
- first_name: Charles
  full_name: Roques-Carmes, Charles
  id: e2e68fc9-6505-11ef-a541-eb4e72cc3e82
  last_name: Roques-Carmes
- first_name: Shanhui
  full_name: Fan, Shanhui
  last_name: Fan
- first_name: David A. B.
  full_name: Miller, David A. B.
  last_name: Miller
- first_name: Olav
  full_name: Solgaard, Olav
  last_name: Solgaard
citation:
  ama: Valdez CG, Kroo AR, Vlk M, et al. Programmable optical filters based on feed-forward
    photonic meshes. <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/arXiv.2509.12059">10.48550/arXiv.2509.12059</a>
  apa: Valdez, C. G., Kroo, A. R., Vlk, M., Roques-Carmes, C., Fan, S., Miller, D.
    A. B., &#38; Solgaard, O. (n.d.). Programmable optical filters based on feed-forward
    photonic meshes. <i>arXiv</i>. <a href="https://doi.org/10.48550/arXiv.2509.12059">https://doi.org/10.48550/arXiv.2509.12059</a>
  chicago: Valdez, Carson G., Anne R. Kroo, Marek Vlk, Charles Roques-Carmes, Shanhui
    Fan, David A. B. Miller, and Olav Solgaard. “Programmable Optical Filters Based
    on Feed-Forward Photonic Meshes.” <i>ArXiv</i>, n.d. <a href="https://doi.org/10.48550/arXiv.2509.12059">https://doi.org/10.48550/arXiv.2509.12059</a>.
  ieee: C. G. Valdez <i>et al.</i>, “Programmable optical filters based on feed-forward
    photonic meshes,” <i>arXiv</i>. .
  ista: Valdez CG, Kroo AR, Vlk M, Roques-Carmes C, Fan S, Miller DAB, Solgaard O.
    Programmable optical filters based on feed-forward photonic meshes. arXiv, 2509.12059.
  mla: Valdez, Carson G., et al. “Programmable Optical Filters Based on Feed-Forward
    Photonic Meshes.” <i>ArXiv</i>, 2509.12059, doi:<a href="https://doi.org/10.48550/arXiv.2509.12059">10.48550/arXiv.2509.12059</a>.
  short: C.G. Valdez, A.R. Kroo, M. Vlk, C. Roques-Carmes, S. Fan, D.A.B. Miller,
    O. Solgaard, ArXiv (n.d.).
date_created: 2026-04-09T09:10:41Z
date_published: 2025-09-15T00:00:00Z
date_updated: 2026-04-13T11:01:05Z
day: '15'
doi: 10.48550/arXiv.2509.12059
extern: '1'
external_id:
  arxiv:
  - '2509.12059'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2509.12059
month: '09'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: submitted
scopus_import: '1'
status: public
title: Programmable optical filters based on feed-forward photonic meshes
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '21697'
abstract:
- lang: eng
  text: Integrated multimode quantum optics is a promising platform for scalable continuous-variable
    quantum technologies leveraging multimode squeezing in both the spatial and spectral
    domains. However, on-chip measurement, routing and processing the relevant ``supermodes''
    over which the squeezing resource is distributed still scales quadratically with
    the number of modes $N$, causing rapid increase in photonic circuit size and number
    of required measurements. Here, we introduce a variational scheme, relying on
    self-configuring photonic networks (SCN) that learns and extracts the most-squeezed
    supermodes sequentially, reducing both the circuit size and the experimental overhead.
    Using homodyne measurement as a cost function, a sparse SCN discovers the $l\ll
    N$ most significant supermodes using $O(lN)$ physical elements and optimization
    steps. We analyze and numerically simulate these architectures for both real-space
    and frequency-domain implementations, showing a fidelity close to unity between
    the learned circuit and the supermode decomposition, even in the presence of optical
    losses and detection noise. In the frequency domain, we show that circuit size
    can be further reduced by using inverse-designed surrogate networks, which emulate
    the layers learned thus far. Using two different frequency encoding schemes --
    uniformly- and non-uniformly-spaced frequency bins -- we reduce an entire network
    (learning all $N$ supermodes) to $O(N)$ and even $O(1)$ modulated cavities. Our
    results point toward chip-scale, resource-efficient quantum processing units and
    demultiplexers for continuous variable processing in multimode quantum optics,
    with applications ranging from quantum communication, metrology, and computation.
article_number: '2509.16753'
article_processing_charge: No
arxiv: 1
author:
- first_name: Aviv
  full_name: Karnieli, Aviv
  last_name: Karnieli
- first_name: Paul-Alexis
  full_name: Mor, Paul-Alexis
  last_name: Mor
- first_name: Charles
  full_name: Roques-Carmes, Charles
  id: e2e68fc9-6505-11ef-a541-eb4e72cc3e82
  last_name: Roques-Carmes
- first_name: Eran
  full_name: Lustig, Eran
  last_name: Lustig
- first_name: Jamison
  full_name: Sloan, Jamison
  last_name: Sloan
- first_name: Jelena
  full_name: Vučković, Jelena
  last_name: Vučković
- first_name: David A. B.
  full_name: Miller, David A. B.
  last_name: Miller
- first_name: Shanhui
  full_name: Fan, Shanhui
  last_name: Fan
citation:
  ama: Karnieli A, Mor P-A, Roques-Carmes C, et al. Variational processing of multimode
    squeezed light. <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/arXiv.2509.16753">10.48550/arXiv.2509.16753</a>
  apa: Karnieli, A., Mor, P.-A., Roques-Carmes, C., Lustig, E., Sloan, J., Vučković,
    J., … Fan, S. (n.d.). Variational processing of multimode squeezed light. <i>arXiv</i>.
    <a href="https://doi.org/10.48550/arXiv.2509.16753">https://doi.org/10.48550/arXiv.2509.16753</a>
  chicago: Karnieli, Aviv, Paul-Alexis Mor, Charles Roques-Carmes, Eran Lustig, Jamison
    Sloan, Jelena Vučković, David A. B. Miller, and Shanhui Fan. “Variational Processing
    of Multimode Squeezed Light.” <i>ArXiv</i>, n.d. <a href="https://doi.org/10.48550/arXiv.2509.16753">https://doi.org/10.48550/arXiv.2509.16753</a>.
  ieee: A. Karnieli <i>et al.</i>, “Variational processing of multimode squeezed light,”
    <i>arXiv</i>. .
  ista: Karnieli A, Mor P-A, Roques-Carmes C, Lustig E, Sloan J, Vučković J, Miller
    DAB, Fan S. Variational processing of multimode squeezed light. arXiv, 2509.16753.
  mla: Karnieli, Aviv, et al. “Variational Processing of Multimode Squeezed Light.”
    <i>ArXiv</i>, 2509.16753, doi:<a href="https://doi.org/10.48550/arXiv.2509.16753">10.48550/arXiv.2509.16753</a>.
  short: A. Karnieli, P.-A. Mor, C. Roques-Carmes, E. Lustig, J. Sloan, J. Vučković,
    D.A.B. Miller, S. Fan, ArXiv (n.d.).
date_created: 2026-04-09T09:10:41Z
date_published: 2025-09-20T00:00:00Z
date_updated: 2026-04-13T11:00:05Z
day: '20'
doi: 10.48550/arXiv.2509.16753
extern: '1'
external_id:
  arxiv:
  - '2509.16753'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2509.16753
month: '09'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: submitted
scopus_import: '1'
status: public
title: Variational processing of multimode squeezed light
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '21706'
abstract:
- lang: eng
  text: "Consider a quadratic polynomial Q(ξ1, . . . , ξn) of independent Rademacher
    random variables ξ1, . . . , ξn. To what extent can Q(ξ1, . . . , ξn) concentrate
    on a single value? This quadratic version of the classical Littlewood–Offord problem
    was popularised by Costello, Tao and Vu in their study of symmetric random matrices.
    In this paper, we obtain an essentially optimal bound for this problem, as conjectured
    by Nguyen and Vu. Specifically, if Q(ξ1, . . . , ξn) ‘robustly depends on at least
    m of the ξi’ in the sense that there is no way to pin down the value of Q(ξ1,
    . . . , ξn) by fixing values for fewer than m of the variables ξi, then we have
    Pr[Q(ξ1, . . . , ξn) = 0] ≤ O(1/√m). This also implies a similar result in the
    case where ξ1, . . . , ξn have arbitrary distributions. Our proof combines a number
    of ideas that may be of independent interest, including an inductive decoupling
    scheme that reduces quadratic anticoncentration problems\r\nto high-dimensional
    linear anticoncentration problems. Also, one application of our main result is
    the resolution of a conjecture of Alon, Hefetz, Krivelevich and Tyomkyn related
    to graph inducibility. "
acknowledgement: We would like to thank the anonymous referee for a number of helpful
  comments and suggestions. Matthew Kwan was supported by ERC Starting Grant “RANDSTRUCT”
  No. 101076777. Lisa Sauermann was supported in part by NSF Award DMS-2100157 and
  a Sloan Research Fellowship, and in part by the DFG Heisenberg Program.
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Matthew Alan
  full_name: Kwan, Matthew Alan
  id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3
  last_name: Kwan
  orcid: 0000-0002-4003-7567
- first_name: Lisa
  full_name: Sauermann, Lisa
  last_name: Sauermann
citation:
  ama: Kwan MA, Sauermann L. Resolution of the quadratic Littlewood–Offord problem.
    <i>Compositio Mathematica</i>. 2025;161(12):3089-3139. doi:<a href="https://doi.org/10.1112/S0010437X25102789">10.1112/S0010437X25102789</a>
  apa: Kwan, M. A., &#38; Sauermann, L. (2025). Resolution of the quadratic Littlewood–Offord
    problem. <i>Compositio Mathematica</i>. Cambridge University Press. <a href="https://doi.org/10.1112/S0010437X25102789">https://doi.org/10.1112/S0010437X25102789</a>
  chicago: Kwan, Matthew Alan, and Lisa Sauermann. “Resolution of the Quadratic Littlewood–Offord
    Problem.” <i>Compositio Mathematica</i>. Cambridge University Press, 2025. <a
    href="https://doi.org/10.1112/S0010437X25102789">https://doi.org/10.1112/S0010437X25102789</a>.
  ieee: M. A. Kwan and L. Sauermann, “Resolution of the quadratic Littlewood–Offord
    problem,” <i>Compositio Mathematica</i>, vol. 161, no. 12. Cambridge University
    Press, pp. 3089–3139, 2025.
  ista: Kwan MA, Sauermann L. 2025. Resolution of the quadratic Littlewood–Offord
    problem. Compositio Mathematica. 161(12), 3089–3139.
  mla: Kwan, Matthew Alan, and Lisa Sauermann. “Resolution of the Quadratic Littlewood–Offord
    Problem.” <i>Compositio Mathematica</i>, vol. 161, no. 12, Cambridge University
    Press, 2025, pp. 3089–139, doi:<a href="https://doi.org/10.1112/S0010437X25102789">10.1112/S0010437X25102789</a>.
  short: M.A. Kwan, L. Sauermann, Compositio Mathematica 161 (2025) 3089–3139.
corr_author: '1'
date_created: 2026-04-12T22:01:48Z
date_published: 2025-12-01T00:00:00Z
date_updated: 2026-05-04T09:42:57Z
day: '01'
ddc:
- '510'
department:
- _id: MaKw
doi: 10.1112/S0010437X25102789
external_id:
  arxiv:
  - '2312.13826'
file:
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  file_size: 858727
  relation: main_file
  success: 1
file_date_updated: 2026-05-04T09:41:25Z
has_accepted_license: '1'
intvolume: '       161'
issue: '12'
language:
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license: https://creativecommons.org/licenses/by/4.0/
month: '12'
oa: 1
oa_version: Published Version
page: 3089-3139
project:
- _id: bd95085b-d553-11ed-ba76-e55d3349be45
  grant_number: '101076777'
  name: Randomness and structure in combinatorics
publication: Compositio Mathematica
publication_identifier:
  eissn:
  - 1570-5846
  issn:
  - 0010-437X
publication_status: published
publisher: Cambridge University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Resolution of the quadratic Littlewood–Offord problem
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 161
year: '2025'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
PlanS_conform: '1'
_id: '21724'
abstract:
- lang: eng
  text: 'The next generation of weak-gravitational-lensing surveys has the potential
    to place stringent constraints on cosmological parameters. However, their analysis
    is limited by systematics such as the intrinsic alignments of galaxies, which
    alter weak-lensing convergence and can lead to biases in cosmological parameter
    estimations. For the first time, in this work, we investigate the impact of intrinsic
    alignments on non-Gaussian statistics of the weak-lensing field using galaxy shapes
    derived from the IllustrisTNG hydrodynamical simulation. We create two catalogs
    of ray-traced convergence maps: one that includes the measured intrinsic shape
    of each galaxy and another where all galaxies are randomly rotated to eliminate
    intrinsic alignments. We compare a range of weak-lensing statistics between the
    two catalogs, including the shear–shear correlation function, the map-level angular
    power spectrum, one-point, peak count, and minimum distribution functions, and
    Minkowski functionals. For each statistic, we assess the level of statistical
    distinguishability between catalogs for a set of future survey angular areas.
    Our results reveal strong small-scale correlation in the alignment of galaxies
    and statistically significant boosts in weak-lensing convergence in both positive
    and negative directions for high-significance peaks and minima, respectively.
    We note that our analysis is at a fixed number density of  ˜ 5 arcmin^-2, drawn
    from a single realization of initial conditions, and does not include observational
    uncertainties or supersample covariance contributions. Weak-lensing analyses utilizing
    non-Gaussian statistics must account for intrinsic alignments to avoid significantly
    compromised cosmological inferences.'
acknowledgement: We thank Fulvio Ferlito, Ana Maria Delgado, and Ken Osato for helpful
  conversations during this work. M.E.L. is supported by NSF grant DGE-2036197. Z.H.
  acknowledges financial support from NASA ATP grant 80NSSC24K1093. The Flatiron Institute
  is supported by the Simons Foundation.
article_number: '36'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Max E.
  full_name: Lee, Max E.
  last_name: Lee
- first_name: Zoltán
  full_name: Haiman, Zoltán
  id: 7c006e8c-cc0d-11ee-8322-cb904ef76f36
  last_name: Haiman
  orcid: 0000-0003-3633-5403
- first_name: Shivam
  full_name: Pandey, Shivam
  last_name: Pandey
- first_name: Shy
  full_name: Genel, Shy
  last_name: Genel
citation:
  ama: Lee ME, Haiman Z, Pandey S, Genel S. The effect of intrinsic alignments on
    weak-lensing statistics in hydrodynamical simulations. <i>The Astrophysical Journal</i>.
    2025;996(1). doi:<a href="https://doi.org/10.3847/1538-4357/ae1ca7">10.3847/1538-4357/ae1ca7</a>
  apa: Lee, M. E., Haiman, Z., Pandey, S., &#38; Genel, S. (2025). The effect of intrinsic
    alignments on weak-lensing statistics in hydrodynamical simulations. <i>The Astrophysical
    Journal</i>. IOP Publishing. <a href="https://doi.org/10.3847/1538-4357/ae1ca7">https://doi.org/10.3847/1538-4357/ae1ca7</a>
  chicago: Lee, Max E., Zoltán Haiman, Shivam Pandey, and Shy Genel. “The Effect of
    Intrinsic Alignments on Weak-Lensing Statistics in Hydrodynamical Simulations.”
    <i>The Astrophysical Journal</i>. IOP Publishing, 2025. <a href="https://doi.org/10.3847/1538-4357/ae1ca7">https://doi.org/10.3847/1538-4357/ae1ca7</a>.
  ieee: M. E. Lee, Z. Haiman, S. Pandey, and S. Genel, “The effect of intrinsic alignments
    on weak-lensing statistics in hydrodynamical simulations,” <i>The Astrophysical
    Journal</i>, vol. 996, no. 1. IOP Publishing, 2025.
  ista: Lee ME, Haiman Z, Pandey S, Genel S. 2025. The effect of intrinsic alignments
    on weak-lensing statistics in hydrodynamical simulations. The Astrophysical Journal.
    996(1), 36.
  mla: Lee, Max E., et al. “The Effect of Intrinsic Alignments on Weak-Lensing Statistics
    in Hydrodynamical Simulations.” <i>The Astrophysical Journal</i>, vol. 996, no.
    1, 36, IOP Publishing, 2025, doi:<a href="https://doi.org/10.3847/1538-4357/ae1ca7">10.3847/1538-4357/ae1ca7</a>.
  short: M.E. Lee, Z. Haiman, S. Pandey, S. Genel, The Astrophysical Journal 996 (2025).
date_created: 2026-04-12T22:01:52Z
date_published: 2025-12-23T00:00:00Z
date_updated: 2026-04-13T08:30:52Z
day: '23'
ddc:
- '520'
department:
- _id: ZoHa
doi: 10.3847/1538-4357/ae1ca7
external_id:
  arxiv:
  - '2504.12460'
file:
- access_level: open_access
  checksum: 0d8fa05617420230eac39944b36839e9
  content_type: application/pdf
  creator: dernst
  date_created: 2026-04-13T08:20:16Z
  date_updated: 2026-04-13T08:20:16Z
  file_id: '21732'
  file_name: 2025_AstrophysicalJournal_Lee.pdf
  file_size: 4122087
  relation: main_file
  success: 1
file_date_updated: 2026-04-13T08:20:16Z
has_accepted_license: '1'
intvolume: '       996'
issue: '1'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
publication: The Astrophysical Journal
publication_identifier:
  eissn:
  - 1538-4357
  issn:
  - 0004-637X
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: The effect of intrinsic alignments on weak-lensing statistics in hydrodynamical
  simulations
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 996
year: '2025'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
PlanS_conform: '1'
_id: '21727'
abstract:
- lang: eng
  text: We present a comprehensive analysis of the MIRI Extremely Red Object Virgil,
    a Lyα emitter at zspec = 6.6379 ± 0.0035 with the photometric properties of a
    Little Red Dot. Leveraging new JWST/MIRI imaging from the MIDIS and PAHSPECS programs,
    we confirm Virgil’s extraordinary nature among galaxies in JADES/GOODS-South,
    exhibiting a strikingly red NIRCam-to-MIRI color (F444W–F1500W = 2.84 ± 0.04 mag).
    Deep NIRSpec/PRISM spectroscopy from the OASIS program offers key insights into
    the host galaxy, revealing properties of an average star-forming galaxy during
    Cosmic Reionization, such as a subsolar metallicity, low-to-moderate dust content,
    and a relatively high ionization parameter and electron temperature. By estimating
    the star formation rate of Virgil from UV and Hα, we find evidence that the galaxy
    is either entering or fading out of a bursty episode. Although line-ratio diagnostics
    employed at high z would classify Virgil as an active galactic nucleus (AGN),
    this classification becomes ambiguous once redshift evolution is considered. Nonetheless,
    Virgil occupies the same parameter space as recently confirmed AGNs at similar
    redshifts. The new deep MIRI data at 15 μm reinforce the AGN nature of Virgil,
    as inferred from multiple spectral energy distribution (SED) fitting codes. Virgil’s
    rising infrared SED and UV excess resemble those of Dust-Obscured Galaxies (DOGs)
    studied with Spitzer at Cosmic Noon, particularly blue-excess HotDOGs. Our results
    highlight the need for a multiwavelength approach incorporating MIRI to uncover
    such extreme sources at z ≳ 6 and to shed light on the interplay between galaxy
    evolution and early black hole growth during Cosmic Reionization.
acknowledgement: "The authors are deeply grateful to Antonello Calabrò for valuable
  insights on CLOUDY and pyCloudy, and for publicly sharing their SFG and AGN models,
  which were used as a reference to verify the consistency of our photoionization
  models. The authors also thank Adam Carnall for insightful input on bagpipes and
  for assistance with the implementation of the two-population model adopted in this
  work. Finally, they also thank Camilla Pacifici, Vasily Kokorev, and Cristian Vignali
  for their insightful discussions.\r\n\r\nThis work is based on observations made
  with the NASA/ESA/CSA JWST. The data were obtained from the Mikulski Archive for
  Space Telescopes (MAST) at the Space Telescope Science Institute, which is operated
  by the Association of Universities for Research in Astronomy, Inc., under NASA contract
  NAS 5-03127 for JWST. These observations are associated with JWST programs GTO #1180,
  GO #1210, GTO#1283, GO #1963, GO #1895, GO# 3215, and GO#6511.\r\n\r\nThe authors
  acknowledge the FRESCO, JEMS, and #3215 teams led by co-PIs P. Oesch, C. C. Williams,
  M. Maseda, D. Eisenstein, and R. Maiolino for developing their observing program
  with a zero-exclusive-access period. Processing for the JADES NIRCam data release
  was performed on the lux cluster at the University of California, Santa Cruz, funded
  by NSF MRI grant AST 1828315. Also based on observations made with the NASA/ESA
  Hubble Space Telescope obtained from the Space Telescope Science Institute, which
  is operated by the Association of Universities for Research in Astronomy, Inc.,
  under NASA contract NAS 526555. The data presented in this article were obtained
  from MAST at the Space Telescope Science Institute. The specific observations analyzed
  can be accessed via doi: 10.17909/1rq3-8048 P. Oesch & D. Magee (2023), C. Williams
  et al. (2023), G. Illingworth (2015), and M. Rieke et al. (2023).\r\n\r\nA.J.B.
  acknowledges funding from the “FirstGalaxies” Advanced Grant from the European Research
  Council (ERC) under the European Union’s Horizon 2020 research and innovation program
  (grant agreement No. 789056).\r\n\r\nP.G.P.-G. acknowledges support from grant PID2022-139567NB-I00
  funded by the Spanish Ministerio de Ciencia e Innovación MCIN/AEI/10.13039/501100011033,
  FEDER, UE.\r\n\r\nB.E.R. acknowledges support from the NIRCam Science Team contract
  to the University of Arizona, NAS5-02015, and JWST Program 3215.\r\n\r\nS.T. acknowledges
  support by the Royal Society Research Grant G125142.\r\n\r\nThe research of C.C.W.
  is supported by NOIRLab, which is managed by the Association of Universities for
  Research in Astronomy (AURA) under a cooperative agreement with the National Science
  Foundation.\r\n\r\nJ.W. gratefully acknowledges support from the Cosmic Dawn Center
  through the DAWN Fellowship. The Cosmic Dawn Center (DAWN) is funded by the Danish
  National Research Foundation under grant No. 140.\r\n\r\nY.Z., Z.J., and P.L. gratefully
  acknowledge the JWST/NIRCam contract to the University of Arizona NAS5-02015.\r\n\r\nThe
  work of G.H.R. and P.L. was also supported by grant 80NSSC18K0555, from the NASA
  Goddard Space Flight Center to the University of Arizona.\r\n\r\nH.Ü. acknowledges
  funding by the European Union (ERC APEX, 101164796). Views and opinions expressed
  are however those of the authors only and do not necessarily reflect those of the
  European Union or the European Research Council Executive Agency. Neither the European
  Union nor the granting authority can be held responsible for them.\r\n\r\nG.C.J.
  acknowledges support by the Science and Technology Facilities Council (STFC), ERC
  Advanced grant 695671 “QUENCH.”\r\n\r\nA.C.G. acknowledges support by JWST contract
  B0215/JWST-GO-02926.\r\n\r\nG.O. acknowledges support from the Swedish National
  Space Agency (SNSA).\r\n\r\nH.I. acknowledges support from JSPS KAKENHI grant No.
  JP21H01129.\r\n\r\nM.A. gratefully acknowledges support from ANID Basal Project
  FB210003 and ANID MILENIO NCN2024_112.\r\n\r\nT.D.S. acknowledges the research project
  was supported by the Hellenic Foundation for Research and Innovation (HFRI) under
  the “2nd Call for HFRI Research Projects to Support Faculty Members and Researchers”
  (project No.: 03382).\r\n\r\nR.M. acknowledges support by the Science and Technology
  Facilities Council (STFC), by the ERC through Advanced grant 695671 “QUENCH,” and
  by the UKRI Frontier Research grant RISEandFALL. R.M. also acknowledges funding
  from a research professorship from the Royal Society.\r\n\r\nI.S. acknowledges funding
  from the Atraccíon de Talento grant No. 2022-T1/TIC-20472 of the Comunidad de Madrid,
  Spain, and the European Research Council (ERC) under the European Union’s Horizon
  2020 research and innovation program (grant No. 101117541, DistantDust).\r\n\r\nK.I.C.
  acknowledges funding from the Dutch Research Council (NWO) through the award of
  the Vici grant VI.C.212.036.\r\n\r\nFacilities: HST - Hubble Space Telescope satellite,
  JWST. -\r\n\r\nSoftware: Astropy (Astropy Collaboration et al. 2022), Bagpipes (A.
  C. Carnall et al. 2019), MSAEXP (G. Brammer 2023) NumPy (C. R. Harris et al. 2020),
  pandas (The pandas development team 2024) Photutils (L. Bradley et al. 2016), TOPCAT
  (M. Taylor 2022)."
article_number: '86'
article_processing_charge: Yes
article_type: original
author:
- first_name: Pierluigi
  full_name: Rinaldi, Pierluigi
  last_name: Rinaldi
- first_name: Pablo G.
  full_name: Pérez-González, Pablo G.
  last_name: Pérez-González
- first_name: George H.
  full_name: Rieke, George H.
  last_name: Rieke
- first_name: Jianwei
  full_name: Lyu, Jianwei
  last_name: Lyu
- first_name: Francesco
  full_name: D’Eugenio, Francesco
  last_name: D’Eugenio
- first_name: Zihao
  full_name: Wu, Zihao
  last_name: Wu
- first_name: Stefano
  full_name: Carniani, Stefano
  last_name: Carniani
- first_name: Tobias J.
  full_name: Looser, Tobias J.
  last_name: Looser
- first_name: Irene
  full_name: Shivaei, Irene
  last_name: Shivaei
- first_name: Leindert A.
  full_name: Boogaard, Leindert A.
  last_name: Boogaard
- first_name: Tanio
  full_name: Diaz-Santos, Tanio
  last_name: Diaz-Santos
- first_name: Luis
  full_name: Colina, Luis
  last_name: Colina
- first_name: Göran
  full_name: Östlin, Göran
  last_name: Östlin
- first_name: Stacey
  full_name: Alberts, Stacey
  last_name: Alberts
- first_name: Javier
  full_name: Álvarez-Márquez, Javier
  last_name: Álvarez-Márquez
- first_name: Marianna
  full_name: Annuziatella, Marianna
  last_name: Annuziatella
- first_name: Manuel
  full_name: Aravena, Manuel
  last_name: Aravena
- first_name: Rachana
  full_name: Bhatawdekar, Rachana
  last_name: Bhatawdekar
- first_name: Andrew J.
  full_name: Bunker, Andrew J.
  last_name: Bunker
- first_name: Karina I.
  full_name: Caputi, Karina I.
  last_name: Caputi
- first_name: Stéphane
  full_name: Charlot, Stéphane
  last_name: Charlot
- first_name: Alejandro
  full_name: Crespo Gómez, Alejandro
  last_name: Crespo Gómez
- first_name: Mirko
  full_name: Curti, Mirko
  last_name: Curti
- first_name: Andreas
  full_name: Eckart, Andreas
  last_name: Eckart
- first_name: Steven
  full_name: Gillman, Steven
  last_name: Gillman
- first_name: Kevin
  full_name: Hainline, Kevin
  last_name: Hainline
- first_name: Nimisha
  full_name: Kumari, Nimisha
  last_name: Kumari
- first_name: Jens
  full_name: Hjorth, Jens
  last_name: Hjorth
- first_name: Edoardo
  full_name: Iani, Edoardo
  id: 4053390a-6b68-11ef-9828-a3b8adef8d0a
  last_name: Iani
  orcid: 0000-0001-8386-3546
- first_name: Hanae
  full_name: Inami, Hanae
  last_name: Inami
- first_name: Zhiyuan
  full_name: Ji, Zhiyuan
  last_name: Ji
- first_name: Benjamin D.
  full_name: Johnson, Benjamin D.
  last_name: Johnson
- first_name: Gareth C.
  full_name: Jones, Gareth C.
  last_name: Jones
- first_name: Álvaro
  full_name: Labiano, Álvaro
  last_name: Labiano
- first_name: Roberto
  full_name: Maiolino, Roberto
  last_name: Maiolino
- first_name: Jens
  full_name: Melinder, Jens
  last_name: Melinder
- first_name: Thibaud
  full_name: Moutard, Thibaud
  last_name: Moutard
- first_name: Florian
  full_name: Peissker, Florian
  last_name: Peissker
- first_name: Marcia
  full_name: Rieke, Marcia
  last_name: Rieke
- first_name: Brant
  full_name: Robertson, Brant
  last_name: Robertson
- first_name: Jan
  full_name: Scholtz, Jan
  last_name: Scholtz
- first_name: Sandro
  full_name: Tacchella, Sandro
  last_name: Tacchella
- first_name: Paul P.
  full_name: Van Der Werf, Paul P.
  last_name: Van Der Werf
- first_name: Fabian
  full_name: Walter, Fabian
  last_name: Walter
- first_name: Christina C.
  full_name: Williams, Christina C.
  last_name: Williams
- first_name: Chris
  full_name: Willott, Chris
  last_name: Willott
- first_name: Joris
  full_name: Witstok, Joris
  last_name: Witstok
- first_name: Hannah
  full_name: Übler, Hannah
  last_name: Übler
- first_name: Yongda
  full_name: Zhu, Yongda
  last_name: Zhu
citation:
  ama: 'Rinaldi P, Pérez-González PG, Rieke GH, et al. Deciphering the nature of Virgil:
    An obscured active galactic nucleus lurking within an apparently normal Lyα emitter
    during cosmic reionization. <i>The Astrophysical Journal</i>. 2025;994(1). doi:<a
    href="https://doi.org/10.3847/1538-4357/ae089c">10.3847/1538-4357/ae089c</a>'
  apa: 'Rinaldi, P., Pérez-González, P. G., Rieke, G. H., Lyu, J., D’Eugenio, F.,
    Wu, Z., … Zhu, Y. (2025). Deciphering the nature of Virgil: An obscured active
    galactic nucleus lurking within an apparently normal Lyα emitter during cosmic
    reionization. <i>The Astrophysical Journal</i>. IOP Publishing. <a href="https://doi.org/10.3847/1538-4357/ae089c">https://doi.org/10.3847/1538-4357/ae089c</a>'
  chicago: 'Rinaldi, Pierluigi, Pablo G. Pérez-González, George H. Rieke, Jianwei
    Lyu, Francesco D’Eugenio, Zihao Wu, Stefano Carniani, et al. “Deciphering the
    Nature of Virgil: An Obscured Active Galactic Nucleus Lurking within an Apparently
    Normal Lyα Emitter during Cosmic Reionization.” <i>The Astrophysical Journal</i>.
    IOP Publishing, 2025. <a href="https://doi.org/10.3847/1538-4357/ae089c">https://doi.org/10.3847/1538-4357/ae089c</a>.'
  ieee: 'P. Rinaldi <i>et al.</i>, “Deciphering the nature of Virgil: An obscured
    active galactic nucleus lurking within an apparently normal Lyα emitter during
    cosmic reionization,” <i>The Astrophysical Journal</i>, vol. 994, no. 1. IOP Publishing,
    2025.'
  ista: 'Rinaldi P, Pérez-González PG, Rieke GH, Lyu J, D’Eugenio F, Wu Z, Carniani
    S, Looser TJ, Shivaei I, Boogaard LA, Diaz-Santos T, Colina L, Östlin G, Alberts
    S, Álvarez-Márquez J, Annuziatella M, Aravena M, Bhatawdekar R, Bunker AJ, Caputi
    KI, Charlot S, Crespo Gómez A, Curti M, Eckart A, Gillman S, Hainline K, Kumari
    N, Hjorth J, Iani E, Inami H, Ji Z, Johnson BD, Jones GC, Labiano Á, Maiolino
    R, Melinder J, Moutard T, Peissker F, Rieke M, Robertson B, Scholtz J, Tacchella
    S, Van Der Werf PP, Walter F, Williams CC, Willott C, Witstok J, Übler H, Zhu
    Y. 2025. Deciphering the nature of Virgil: An obscured active galactic nucleus
    lurking within an apparently normal Lyα emitter during cosmic reionization. The
    Astrophysical Journal. 994(1), 86.'
  mla: 'Rinaldi, Pierluigi, et al. “Deciphering the Nature of Virgil: An Obscured
    Active Galactic Nucleus Lurking within an Apparently Normal Lyα Emitter during
    Cosmic Reionization.” <i>The Astrophysical Journal</i>, vol. 994, no. 1, 86, IOP
    Publishing, 2025, doi:<a href="https://doi.org/10.3847/1538-4357/ae089c">10.3847/1538-4357/ae089c</a>.'
  short: P. Rinaldi, P.G. Pérez-González, G.H. Rieke, J. Lyu, F. D’Eugenio, Z. Wu,
    S. Carniani, T.J. Looser, I. Shivaei, L.A. Boogaard, T. Diaz-Santos, L. Colina,
    G. Östlin, S. Alberts, J. Álvarez-Márquez, M. Annuziatella, M. Aravena, R. Bhatawdekar,
    A.J. Bunker, K.I. Caputi, S. Charlot, A. Crespo Gómez, M. Curti, A. Eckart, S.
    Gillman, K. Hainline, N. Kumari, J. Hjorth, E. Iani, H. Inami, Z. Ji, B.D. Johnson,
    G.C. Jones, Á. Labiano, R. Maiolino, J. Melinder, T. Moutard, F. Peissker, M.
    Rieke, B. Robertson, J. Scholtz, S. Tacchella, P.P. Van Der Werf, F. Walter, C.C.
    Williams, C. Willott, J. Witstok, H. Übler, Y. Zhu, The Astrophysical Journal
    994 (2025).
date_created: 2026-04-12T22:01:53Z
date_published: 2025-11-20T00:00:00Z
date_updated: 2026-04-13T07:54:11Z
day: '20'
ddc:
- '520'
department:
- _id: JoMa
doi: 10.3847/1538-4357/ae089c
file:
- access_level: open_access
  checksum: 5d13b0ad3e9f56cbe29c5de0ba5757c8
  content_type: application/pdf
  creator: dernst
  date_created: 2026-04-13T07:53:00Z
  date_updated: 2026-04-13T07:53:00Z
  file_id: '21731'
  file_name: 2025_AstrophysicalJournal_Rinaldi.pdf
  file_size: 10298729
  relation: main_file
  success: 1
file_date_updated: 2026-04-13T07:53:00Z
has_accepted_license: '1'
intvolume: '       994'
issue: '1'
language:
- iso: eng
month: '11'
oa: 1
oa_version: Published Version
publication: The Astrophysical Journal
publication_identifier:
  eissn:
  - 1538-4357
  issn:
  - 0004-637X
publication_status: published
publisher: IOP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Deciphering the nature of Virgil: An obscured active galactic nucleus lurking
  within an apparently normal Lyα emitter during cosmic reionization'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 994
year: '2025'
...
---
OA_type: closed access
_id: '21885'
abstract:
- lang: eng
  text: Symbolic datatypes have proved to be central for automated reasoning about
    dynamical systems. In its basic form, a symbolic datatype for a class of dynamical
    systems supports the representation of state and transition sets, boolean operations
    and emptiness checks on such sets, and the transformation of a state set by a
    transition set. Successful examples of symbolic datatypes include BDDs and SAT
    for reasoning about finitestate systems, as well as polyhedra and SMT for reasoning
    about discrete dynamical systems over multidimensional realvalued state spaces.
    Most automated verification engines are based on such symbolic datatypes.
article_processing_charge: No
author:
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000-0002-2985-7724
citation:
  ama: 'Henzinger TA. Neural Certificates. In: <i>Proceedings of the 27th International
    Symposium on Symbolic and Numeric Algorithms for Scientific Computing</i>. IEEE;
    2025. doi:<a href="https://doi.org/10.1109/SYNASC69064.2025.00008">10.1109/SYNASC69064.2025.00008</a>'
  apa: 'Henzinger, T. A. (2025). Neural Certificates. In <i>Proceedings of the 27th
    International Symposium on Symbolic and Numeric Algorithms for Scientific Computing</i>.
    Timisoara, Romania: IEEE. <a href="https://doi.org/10.1109/SYNASC69064.2025.00008">https://doi.org/10.1109/SYNASC69064.2025.00008</a>'
  chicago: Henzinger, Thomas A. “Neural Certificates.” In <i>Proceedings of the 27th
    International Symposium on Symbolic and Numeric Algorithms for Scientific Computing</i>.
    IEEE, 2025. <a href="https://doi.org/10.1109/SYNASC69064.2025.00008">https://doi.org/10.1109/SYNASC69064.2025.00008</a>.
  ieee: T. A. Henzinger, “Neural Certificates,” in <i>Proceedings of the 27th International
    Symposium on Symbolic and Numeric Algorithms for Scientific Computing</i>, Timisoara,
    Romania, 2025.
  ista: 'Henzinger TA. 2025. Neural Certificates. Proceedings of the 27th International
    Symposium on Symbolic and Numeric Algorithms for Scientific Computing. SYNASC:
    Symposium on Symbolic and Numeric Algorithms for Scientific Computing.'
  mla: Henzinger, Thomas A. “Neural Certificates.” <i>Proceedings of the 27th International
    Symposium on Symbolic and Numeric Algorithms for Scientific Computing</i>, IEEE,
    2025, doi:<a href="https://doi.org/10.1109/SYNASC69064.2025.00008">10.1109/SYNASC69064.2025.00008</a>.
  short: T.A. Henzinger, in:, Proceedings of the 27th International Symposium on Symbolic
    and Numeric Algorithms for Scientific Computing, IEEE, 2025.
conference:
  end_date: 2025-09-25
  location: Timisoara, Romania
  name: 'SYNASC: Symposium on Symbolic and Numeric Algorithms for Scientific Computing'
  start_date: 2025-09-22
corr_author: '1'
date_created: 2026-05-17T22:02:11Z
date_published: 2025-10-01T00:00:00Z
date_updated: 2026-05-18T08:34:15Z
day: '01'
department:
- _id: ToHe
doi: 10.1109/SYNASC69064.2025.00008
language:
- iso: eng
month: '10'
oa_version: None
publication: Proceedings of the 27th International Symposium on Symbolic and Numeric
  Algorithms for Scientific Computing
publication_identifier:
  eisbn:
  - '9798331590116'
  eissn:
  - 2470-881X
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Neural Certificates
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '21912'
abstract:
- lang: eng
  text: The mammalian fatty acid synthase (FASN) enzyme is a dynamic multienzyme that
    belongs to the megasynthase family. In mammals, a single gene encodes six catalytically
    active domains and a flexibly tethered acyl carrier protein (ACP) domain that
    shuttles intermediates between active sites for fatty acid biosynthesis1. FASN
    is an essential enzyme in mammalian development through the role that fatty acids
    have in membrane formation, energy storage, cell signalling and protein modifications.
    Thus, FASN is a promising target for treatment of a large variety of diseases
    including cancer, metabolic dysfunction-associated fatty liver disease, and viral
    and parasite infections2,3. The multi-faceted mechanism of FASN and the dynamic
    nature of the protein, in particular of the ACP, have made it challenging to understand
    at the molecular level. Here we report cryo-electron microscopy structures of
    human FASN in a multitude of conformational states with NADPH and NADP+ plus acetoacetyl-CoA
    present, including structures with the ACP stalled at the dehydratase (DH) and
    enoyl-reductase (ER) domains. We show that FASN activity in vitro and de novo
    lipogenesis in cells is inhibited by mutations at the ACP–DH and ACP–ER interfaces.
    Together, these studies provide new molecular insights into the dynamic nature
    of FASN and the ACP shuttling mechanism, with implications for developing improved
    FASN-targeted therapeutics.
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Kollin
  full_name: Schultz, Kollin
  last_name: Schultz
- first_name: Pedro
  full_name: Costa-Pinheiro, Pedro
  last_name: Costa-Pinheiro
- first_name: Lauren
  full_name: Gardner, Lauren
  id: f9dedd98-6d15-11f0-88a5-a7b4143fdec5
  last_name: Gardner
  orcid: 0009-0000-5733-1546
- first_name: Laura V.
  full_name: Pinheiro, Laura V.
  last_name: Pinheiro
- first_name: Julio
  full_name: Ramirez-Solis, Julio
  last_name: Ramirez-Solis
- first_name: Sarah M.
  full_name: Gardner, Sarah M.
  last_name: Gardner
- first_name: Kathryn E.
  full_name: Wellen, Kathryn E.
  last_name: Wellen
- first_name: Ronen
  full_name: Marmorstein, Ronen
  last_name: Marmorstein
citation:
  ama: Schultz K, Costa-Pinheiro P, Gardner L, et al. Snapshots of acyl carrier protein
    shuttling in human fatty acid synthase. <i>Nature</i>. 2025;641(8062):520-528.
    doi:<a href="https://doi.org/10.1038/s41586-025-08587-x">10.1038/s41586-025-08587-x</a>
  apa: Schultz, K., Costa-Pinheiro, P., Gardner, L., Pinheiro, L. V., Ramirez-Solis,
    J., Gardner, S. M., … Marmorstein, R. (2025). Snapshots of acyl carrier protein
    shuttling in human fatty acid synthase. <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/s41586-025-08587-x">https://doi.org/10.1038/s41586-025-08587-x</a>
  chicago: Schultz, Kollin, Pedro Costa-Pinheiro, Lauren Gardner, Laura V. Pinheiro,
    Julio Ramirez-Solis, Sarah M. Gardner, Kathryn E. Wellen, and Ronen Marmorstein.
    “Snapshots of Acyl Carrier Protein Shuttling in Human Fatty Acid Synthase.” <i>Nature</i>.
    Springer Nature, 2025. <a href="https://doi.org/10.1038/s41586-025-08587-x">https://doi.org/10.1038/s41586-025-08587-x</a>.
  ieee: K. Schultz <i>et al.</i>, “Snapshots of acyl carrier protein shuttling in
    human fatty acid synthase,” <i>Nature</i>, vol. 641, no. 8062. Springer Nature,
    pp. 520–528, 2025.
  ista: Schultz K, Costa-Pinheiro P, Gardner L, Pinheiro LV, Ramirez-Solis J, Gardner
    SM, Wellen KE, Marmorstein R. 2025. Snapshots of acyl carrier protein shuttling
    in human fatty acid synthase. Nature. 641(8062), 520–528.
  mla: Schultz, Kollin, et al. “Snapshots of Acyl Carrier Protein Shuttling in Human
    Fatty Acid Synthase.” <i>Nature</i>, vol. 641, no. 8062, Springer Nature, 2025,
    pp. 520–28, doi:<a href="https://doi.org/10.1038/s41586-025-08587-x">10.1038/s41586-025-08587-x</a>.
  short: K. Schultz, P. Costa-Pinheiro, L. Gardner, L.V. Pinheiro, J. Ramirez-Solis,
    S.M. Gardner, K.E. Wellen, R. Marmorstein, Nature 641 (2025) 520–528.
date_created: 2026-05-24T08:25:19Z
date_published: 2025-05-08T00:00:00Z
date_updated: 2026-06-02T14:57:52Z
day: '08'
ddc:
- '572'
doi: 10.1038/s41586-025-08587-x
extern: '1'
external_id:
  pmid:
  - '39979457 '
has_accepted_license: '1'
intvolume: '       641'
issue: '8062'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc-nd/4.0/
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1038/s41586-025-08587-x
month: '05'
oa: 1
oa_version: Published Version
page: 520-528
pmid: 1
publication: Nature
publication_identifier:
  eissn:
  - 1476-4687
  issn:
  - 0028-0836
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
status: public
title: Snapshots of acyl carrier protein shuttling in human fatty acid synthase
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 641
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '21920'
abstract:
- lang: eng
  text: 'Vertebrates display remarkable diversity of sensorimotor behaviors, each
    adapted to distinct ecological and survival demands. This diversity raises fundamental
    questions about the evolutionary origin of motor control: do conserved spinal
    circuits underlie these behaviors, and how have they diverged across species.
    Recent studies detail spinal cell-type architecture in mammals but comparable,
    high-resolution atlases of the non-mammalian spinal cord are lacking. Here, we
    compare spinal cord cell types between fish, frogs, mice and humans, spanning
    ∼450 million years of evolution. Across species, we define highly conserved programs
    of cell type specification that segregate spinal neurons into nearly identical
    cardinal classes during development. This contrasts with adult stages, when spinal
    cell-type composition selectively diverges for excitatory neuron subpopulations.
    Using spatial transcriptomics, we localize this species divergence to the superficial,
    dorsal spinal cord, where variant neuropeptide expression defines mammalian-specific
    cell types. The most dorsal spinal cord thus emerges as a recently evolved hub
    for sensory integration in mammals, a neospinal cord analogous to the neocortex.</jats:p>'
acknowledgement: "We would like to thank the members of the Sweeney Lab for discussion
  and support; Andrey\r\nBydanov for technical assistance with single-cell sequencing
  processing; and Jay Bikoff,\r\nNikos Konstantinides, Maria Tosches, and Graziana
  Gatto for comments on the manuscript. \r\nThis research was supported by: Horizon
  Europe ERC Starting Grant 101041551 (L.B.S,\r\nY.I., S.P.); Special Research Program
  (SFB) of the Austrian Science Fund (FWF) F7814-B\r\n(L.B.S., S.P., E.M.T); Austrian
  Science Fund (FWF) 10.55776/COE16 (L.B.S., Y.I., E.M.T.);\r\nAustrian Academy of
  Sciences DOC Fellowship 27229 (S.P.); ERC Advanced Grant 742046\r\n(E.M.T.); NIH
  award R24 OD031956 (L.P.); and in part by the Intramural Research\r\nProgram of
  the National Institutes of Health (NIH) through 1ZIA NS003153 to A.J.L.\r\nThe contributions
  of the NIH author are considered Works of the United States\r\nGovernment. The findings
  and conclusions presented in this paper are those of\r\nthe authors and do not necessarily
  reflect the views of the NIH or the U.S. Department\r\nof Health and Human Services. "
article_processing_charge: No
author:
- first_name: Yuri
  full_name: Ignatyev, Yuri
  last_name: Ignatyev
- first_name: Stavros
  full_name: Papadopoulos, Stavros
  id: 40606b92-f128-11eb-9611-bf66a98cfa5c
  last_name: Papadopoulos
- first_name: Mateja
  full_name: Soretić, Mateja
  last_name: Soretić
- first_name: Jake
  full_name: Yeung, Jake
  id: 123012b2-db30-11eb-b4d8-a35840c0551b
  last_name: Yeung
  orcid: 0000-0003-1732-1559
- first_name: Tzi-Yang
  full_name: Lin, Tzi-Yang
  last_name: Lin
- first_name: Elly M
  full_name: Tanaka, Elly M
  last_name: Tanaka
- first_name: Leonid
  full_name: Peshkin, Leonid
  last_name: Peshkin
- first_name: Ariel J
  full_name: Levine, Ariel J
  last_name: Levine
- first_name: Mariano I
  full_name: Gabitto, Mariano I
  last_name: Gabitto
- first_name: Lora Beatrice Jaeger
  full_name: Sweeney, Lora Beatrice Jaeger
  id: 56BE8254-C4F0-11E9-8E45-0B23E6697425
  last_name: Sweeney
  orcid: 0000-0001-9242-5601
citation:
  ama: Ignatyev Y, Papadopoulos S, Soretić M, et al. Innovations in spinal cord cell
    type heterogeneity across vertebrate evolution. <i>bioRxiv</i>. doi:<a href="https://doi.org/10.1101/2025.10.09.680955">10.1101/2025.10.09.680955</a>
  apa: Ignatyev, Y., Papadopoulos, S., Soretić, M., Yeung, J., Lin, T.-Y., Tanaka,
    E. M., … Sweeney, L. B. (n.d.). Innovations in spinal cord cell type heterogeneity
    across vertebrate evolution. <i>bioRxiv</i>. <a href="https://doi.org/10.1101/2025.10.09.680955">https://doi.org/10.1101/2025.10.09.680955</a>
  chicago: Ignatyev, Yuri, Stavros Papadopoulos, Mateja Soretić, Jake Yeung, Tzi-Yang
    Lin, Elly M Tanaka, Leonid Peshkin, Ariel J Levine, Mariano I Gabitto, and Lora
    B. Sweeney. “Innovations in Spinal Cord Cell Type Heterogeneity across Vertebrate
    Evolution.” <i>BioRxiv</i>, n.d. <a href="https://doi.org/10.1101/2025.10.09.680955">https://doi.org/10.1101/2025.10.09.680955</a>.
  ieee: Y. Ignatyev <i>et al.</i>, “Innovations in spinal cord cell type heterogeneity
    across vertebrate evolution,” <i>bioRxiv</i>. .
  ista: Ignatyev Y, Papadopoulos S, Soretić M, Yeung J, Lin T-Y, Tanaka EM, Peshkin
    L, Levine AJ, Gabitto MI, Sweeney LB. Innovations in spinal cord cell type heterogeneity
    across vertebrate evolution. bioRxiv, <a href="https://doi.org/10.1101/2025.10.09.680955">10.1101/2025.10.09.680955</a>.
  mla: Ignatyev, Yuri, et al. “Innovations in Spinal Cord Cell Type Heterogeneity
    across Vertebrate Evolution.” <i>BioRxiv</i>, doi:<a href="https://doi.org/10.1101/2025.10.09.680955">10.1101/2025.10.09.680955</a>.
  short: Y. Ignatyev, S. Papadopoulos, M. Soretić, J. Yeung, T.-Y. Lin, E.M. Tanaka,
    L. Peshkin, A.J. Levine, M.I. Gabitto, L.B. Sweeney, BioRxiv (n.d.).
corr_author: '1'
date_created: 2026-05-27T06:54:04Z
date_published: 2025-10-11T00:00:00Z
date_updated: 2026-05-27T07:25:41Z
day: '11'
department:
- _id: LoSw
- _id: ScienComp
doi: 10.1101/2025.10.09.680955
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1101/2025.10.09.680955
month: '10'
oa: 1
oa_version: Preprint
project:
- _id: ebb66355-77a9-11ec-83b8-b8ac210a4dae
  grant_number: '101041551'
  name: Development and Evolution of Tetrapod Motor Circuits
- _id: 907b765e-16d5-11f0-9cad-fef108a945b1
  grant_number: '27229'
  name: 'A Tale of Two Circuits: Rostrocaudal spinal cord patterning during the swim-to-limb
    transition of Xenopus metamorphosis'
publication: bioRxiv
publication_status: submitted
status: public
title: Innovations in spinal cord cell type heterogeneity across vertebrate evolution
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: preprint
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2025'
...
---
OA_place: publisher
OA_type: gold
_id: '14647'
abstract:
- lang: eng
  text: "In the developing vertebrate central nervous system, neurons and glia typically
    arise\r\nsequentially from common progenitors. Here, we report that the transcription
    factor Forkhead\r\nBox G1 (Foxg1) regulates gliogenesis in the mouse neocortex
    via distinct cell-autonomous roles in progenitors and postmitotic neurons that
    regulate different aspects of the gliogenic FGF signalling pathway. We demonstrate
    that loss of Foxg1 in cortical progenitors at neurogenic stages causes premature
    astrogliogenesis. We identify a novel FOXG1 target, the pro-gliogenic FGF pathway
    component Fgfr3, which is suppressed by FOXG1 cell-autonomously to maintain neurogenesis.
    Furthermore, FOXG1 can also suppress premature astrogliogenesis triggered by the
    augmentation of FGF signalling. We identify a second novel function of FOXG1 in
    regulating the expression of gliogenic cues in newborn neocortical upper-layer
    neurons. Loss of FOXG1 in postmitotic neurons non-autonomously enhances gliogenesis
    in the progenitors via FGF signalling. These results fit well with the model that
    newborn neurons secrete cues that trigger progenitors to produce the next wave
    of cell types, astrocytes. If FGF signalling is attenuated in Foxg1 null progenitors,
    they progress to oligodendrocyte production. Therefore, loss of FOXG1 transitions
    the progenitor to a gliogenic state, producing either astrocytes or oligodendrocytes
    depending on FGF signalling levels. Our results uncover how FOXG1 integrates extrinsic
    signalling via the FGF pathway to regulate the sequential generation of neurons,
    astrocytes, and oligodendrocytes in the cerebral cortex. "
acknowledgement: "We thank the animal house staff of the Tata Institute of Fundamental
  Research, Mumbai (TIFR), for their excellent support; Gordon Fishell (Harvard Medical
  School, USA), and Goichi Miyoshi (Gunma University, Japan) for the Foxg1 floxed
  mouse line; Hiroshi Kawasaki (Kanazawa University, Japan) for the plasmids pCAG-FGF8
  and pCAG-sFgfr3c; Soo Kyung Lee (University at Buffalo, The State University of
  New York, USA) for the Foxg1lox/lox genotyping primers and protocol. We thank Deepak
  Modi and Vainav Patel (National Institute for Research in Reproductive and Child
  Health, NIRRCH, Mumbai, India) for the use of the NIRRCH FACS Facility, and the
  staff of the NIRRCH and TIFR FACS facilities for their assistance. We thank Denis
  Jabaudon (University of Geneva, Switzerland) for his critical comments on the manuscript
  and members of the Jabaudon lab for helpful discussions. This work was funded by
  the Department of Atomic Energy (DAE), Govt. of India (Project Identification no.
  RTI4003,\r\nDAE OM no. 1303/2/2019/R&D-II/DAE/2079). "
article_number: '101851'
article_processing_charge: Yes
article_type: original
author:
- first_name: Mahima
  full_name: Bose, Mahima
  last_name: Bose
- first_name: Varun
  full_name: Suresh, Varun
  last_name: Suresh
- first_name: Urvi
  full_name: Mishra, Urvi
  last_name: Mishra
- first_name: Ishita
  full_name: Talwar, Ishita
  last_name: Talwar
- first_name: Anuradha
  full_name: Yadav, Anuradha
  last_name: Yadav
- first_name: Shiona
  full_name: Biswas, Shiona
  last_name: Biswas
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
- first_name: Shubha
  full_name: Tole, Shubha
  last_name: Tole
citation:
  ama: Bose M, Suresh V, Mishra U, et al. Dual role of FOXG1 in regulating gliogenesis
    in the developing neocortex via the FGF signalling pathway. <i>eLife</i>. 2025;13.
    doi:<a href="https://doi.org/10.7554/elife.101851.3">10.7554/elife.101851.3</a>
  apa: Bose, M., Suresh, V., Mishra, U., Talwar, I., Yadav, A., Biswas, S., … Tole,
    S. (2025). Dual role of FOXG1 in regulating gliogenesis in the developing neocortex
    via the FGF signalling pathway. <i>ELife</i>. eLife Sciences Publications. <a
    href="https://doi.org/10.7554/elife.101851.3">https://doi.org/10.7554/elife.101851.3</a>
  chicago: Bose, Mahima, Varun Suresh, Urvi Mishra, Ishita Talwar, Anuradha Yadav,
    Shiona Biswas, Simon Hippenmeyer, and Shubha Tole. “Dual Role of FOXG1 in Regulating
    Gliogenesis in the Developing Neocortex via the FGF Signalling Pathway.” <i>ELife</i>.
    eLife Sciences Publications, 2025. <a href="https://doi.org/10.7554/elife.101851.3">https://doi.org/10.7554/elife.101851.3</a>.
  ieee: M. Bose <i>et al.</i>, “Dual role of FOXG1 in regulating gliogenesis in the
    developing neocortex via the FGF signalling pathway,” <i>eLife</i>, vol. 13. eLife
    Sciences Publications, 2025.
  ista: Bose M, Suresh V, Mishra U, Talwar I, Yadav A, Biswas S, Hippenmeyer S, Tole
    S. 2025. Dual role of FOXG1 in regulating gliogenesis in the developing neocortex
    via the FGF signalling pathway. eLife. 13, 101851.
  mla: Bose, Mahima, et al. “Dual Role of FOXG1 in Regulating Gliogenesis in the Developing
    Neocortex via the FGF Signalling Pathway.” <i>ELife</i>, vol. 13, 101851, eLife
    Sciences Publications, 2025, doi:<a href="https://doi.org/10.7554/elife.101851.3">10.7554/elife.101851.3</a>.
  short: M. Bose, V. Suresh, U. Mishra, I. Talwar, A. Yadav, S. Biswas, S. Hippenmeyer,
    S. Tole, ELife 13 (2025).
date_created: 2023-12-06T13:07:01Z
date_published: 2025-03-14T00:00:00Z
date_updated: 2025-05-14T11:41:52Z
day: '14'
ddc:
- '570'
department:
- _id: SiHi
doi: 10.7554/elife.101851.3
external_id:
  pmid:
  - '40085500'
file:
- access_level: open_access
  checksum: 64a6a6f86e24b21fe72c7a7fd6056fed
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  creator: dernst
  date_created: 2025-04-03T11:19:26Z
  date_updated: 2025-04-03T11:19:26Z
  file_id: '19467'
  file_name: 2025_eLife_Bose.pdf
  file_size: 17462771
  relation: main_file
  success: 1
file_date_updated: 2025-04-03T11:19:26Z
has_accepted_license: '1'
intvolume: '        13'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
pmid: 1
publication: eLife
publication_identifier:
  eissn:
  - 2050-084X
publication_status: published
publisher: eLife Sciences Publications
quality_controlled: '1'
scopus_import: '1'
status: public
title: Dual role of FOXG1 in regulating gliogenesis in the developing neocortex via
  the FGF signalling pathway
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 13
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '15121'
abstract:
- lang: eng
  text: We present an auction algorithm using multiplicative instead of constant weight
    updates to compute a (1-E)-approximate maximum weight matching (MWM) in a bipartite
    graph with n vertices and m edges in time 0(mE-1), beating the running time of
    the fastest known approximation algorithm of Duan and Pettie [JACM ’14] that runs
    in 0(mE-1 log E-1). Our algorithm is very simple and it can be extended to give
    a dynamic data structure that maintains a (1-E)-approximate maximum weight matching
    under (1) one-sided vertex deletions (with incident edges) and (2) one-sided vertex
    insertions (with incident edges sorted by weight) to the other side. The total
    time time used is 0(mE-1), where m is the sum of the number of initially existing
    and inserted edges.
acknowledgement: The first author thanks Chandra Chekuri for useful discussions about
  this paper. This work was done in part at the University of Vienna. This project
  has received funding from the European Research Council (ERC) under the European
  Union’s Horizon 2020 research and innovation programme (Grant agreement No. 101019564
  “The Design of Modern Fully Dynamic Data Structures (MoDynStruct)” and from the
  Austrian Science Fund (FWF) project “Fast Algorithms for a Reactive Network Layer
  (ReactNet)”, P 33775-N, with additional funding from the netidee SCIENCE Stiftung,
  2020–2024.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Da Wei
  full_name: Zheng, Da Wei
  last_name: Zheng
- first_name: Monika H
  full_name: Henzinger, Monika H
  id: 540c9bbd-f2de-11ec-812d-d04a5be85630
  last_name: Henzinger
  orcid: 0000-0002-5008-6530
citation:
  ama: Zheng DW, Henzinger M. Multiplicative auction algorithm for approximate maximum
    weight bipartite matching. <i>Mathematical Programming</i>. 2025;210:881-894.
    doi:<a href="https://doi.org/10.1007/s10107-024-02066-3">10.1007/s10107-024-02066-3</a>
  apa: Zheng, D. W., &#38; Henzinger, M. (2025). Multiplicative auction algorithm
    for approximate maximum weight bipartite matching. <i>Mathematical Programming</i>.
    Springer Nature. <a href="https://doi.org/10.1007/s10107-024-02066-3">https://doi.org/10.1007/s10107-024-02066-3</a>
  chicago: Zheng, Da Wei, and Monika Henzinger. “Multiplicative Auction Algorithm
    for Approximate Maximum Weight Bipartite Matching.” <i>Mathematical Programming</i>.
    Springer Nature, 2025. <a href="https://doi.org/10.1007/s10107-024-02066-3">https://doi.org/10.1007/s10107-024-02066-3</a>.
  ieee: D. W. Zheng and M. Henzinger, “Multiplicative auction algorithm for approximate
    maximum weight bipartite matching,” <i>Mathematical Programming</i>, vol. 210.
    Springer Nature, pp. 881–894, 2025.
  ista: Zheng DW, Henzinger M. 2025. Multiplicative auction algorithm for approximate
    maximum weight bipartite matching. Mathematical Programming. 210, 881–894.
  mla: Zheng, Da Wei, and Monika Henzinger. “Multiplicative Auction Algorithm for
    Approximate Maximum Weight Bipartite Matching.” <i>Mathematical Programming</i>,
    vol. 210, Springer Nature, 2025, pp. 881–94, doi:<a href="https://doi.org/10.1007/s10107-024-02066-3">10.1007/s10107-024-02066-3</a>.
  short: D.W. Zheng, M. Henzinger, Mathematical Programming 210 (2025) 881–894.
corr_author: '1'
date_created: 2024-03-17T23:00:58Z
date_published: 2025-03-01T00:00:00Z
date_updated: 2025-09-09T12:39:58Z
day: '01'
department:
- _id: MoHe
doi: 10.1007/s10107-024-02066-3
ec_funded: 1
external_id:
  arxiv:
  - '2301.09217'
  isi:
  - '001176048100003'
intvolume: '       210'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2301.09217
month: '03'
oa: 1
oa_version: Preprint
page: 881-894
project:
- _id: bd9ca328-d553-11ed-ba76-dc4f890cfe62
  call_identifier: H2020
  grant_number: '101019564'
  name: The design and evaluation of modern fully dynamic data structures
- _id: bd9e3a2e-d553-11ed-ba76-8aa684ce17fe
  grant_number: P33775
  name: Fast Algorithms for a Reactive Network Layer
publication: Mathematical Programming
publication_identifier:
  eissn:
  - 1436-4646
  issn:
  - 0025-5610
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  record:
  - id: '13236'
    relation: earlier_version
    status: public
scopus_import: '1'
status: public
title: Multiplicative auction algorithm for approximate maximum weight bipartite matching
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 210
year: '2025'
...
---
OA_place: repository
OA_type: green
_id: '15128'
abstract:
- lang: eng
  text: We prove a universal mesoscopic central limit theorem for linear eigenvalue
    statistics of a Wigner-type matrix inside the bulk of the spectrum with compactly
    supported twice continuously differentiable test functions. The main novel ingredient
    is an optimal local law for the two-point function $T(z,\zeta)$  and a general
    class of related quantities involving two resolvents at nearby spectral parameters.
- lang: fre
  text: "On établit un théorème limite central universel pour les statistiques linéaires
    mésoscopiques des valeurs propres d’une matrice de type Wigner au milieu du spectre,
    avec des fonctions de classe \r\n et à support compact. La principale nouveauté
    de cette approche est qu’elle repose sur une loi locale optimale pour la fonction
    à deux points $T(z,\\zeta)$ , ainsi que pour une classe plus générale d’observables
    impliquant deux résolvantes évaluées en des paramètres proches."
acknowledgement: "I would like to express my gratitude to László Erdős for suggesting
  the project and supervising my work. I am also thankful to Yuanyuan Xu and Oleksii
  Kolupaiev for many helpful discussions. Furthermore, I am grateful to Guillaume
  Dubach for translating the abstract into French.\r\nThe author was supported by
  the ERC Advanced Grant “RMTBeyond” No. 101020331."
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Volodymyr
  full_name: Riabov, Volodymyr
  id: 1949f904-edfb-11eb-afb5-e2dfddabb93b
  last_name: Riabov
citation:
  ama: Riabov V. Mesoscopic eigenvalue statistics for Wigner-type matrices. <i>Annales
    de l’institut Henri Poincare (B) Probability and Statistics</i>. 2025;61(1):129-154.
    doi:<a href="https://doi.org/10.1214/23-AIHP1438">10.1214/23-AIHP1438</a>
  apa: Riabov, V. (2025). Mesoscopic eigenvalue statistics for Wigner-type matrices.
    <i>Annales de l’institut Henri Poincare (B) Probability and Statistics</i>. Institute
    of Mathematical Statistics. <a href="https://doi.org/10.1214/23-AIHP1438">https://doi.org/10.1214/23-AIHP1438</a>
  chicago: Riabov, Volodymyr. “Mesoscopic Eigenvalue Statistics for Wigner-Type Matrices.”
    <i>Annales de l’institut Henri Poincare (B) Probability and Statistics</i>. Institute
    of Mathematical Statistics, 2025. <a href="https://doi.org/10.1214/23-AIHP1438">https://doi.org/10.1214/23-AIHP1438</a>.
  ieee: V. Riabov, “Mesoscopic eigenvalue statistics for Wigner-type matrices,” <i>Annales
    de l’institut Henri Poincare (B) Probability and Statistics</i>, vol. 61, no.
    1. Institute of Mathematical Statistics, pp. 129–154, 2025.
  ista: Riabov V. 2025. Mesoscopic eigenvalue statistics for Wigner-type matrices.
    Annales de l’institut Henri Poincare (B) Probability and Statistics. 61(1), 129–154.
  mla: Riabov, Volodymyr. “Mesoscopic Eigenvalue Statistics for Wigner-Type Matrices.”
    <i>Annales de l’institut Henri Poincare (B) Probability and Statistics</i>, vol.
    61, no. 1, Institute of Mathematical Statistics, 2025, pp. 129–54, doi:<a href="https://doi.org/10.1214/23-AIHP1438">10.1214/23-AIHP1438</a>.
  short: V. Riabov, Annales de l’institut Henri Poincare (B) Probability and Statistics
    61 (2025) 129–154.
corr_author: '1'
date_created: 2024-03-20T09:41:04Z
date_published: 2025-02-01T00:00:00Z
date_updated: 2025-05-19T13:54:31Z
day: '01'
department:
- _id: GradSch
- _id: LaEr
doi: 10.1214/23-AIHP1438
ec_funded: 1
external_id:
  arxiv:
  - '2301.01712'
  isi:
  - '001427953600004'
intvolume: '        61'
isi: 1
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2301.01712
month: '02'
oa: 1
oa_version: Preprint
page: 129-154
project:
- _id: 62796744-2b32-11ec-9570-940b20777f1d
  call_identifier: H2020
  grant_number: '101020331'
  name: Random matrices beyond Wigner-Dyson-Mehta
publication: Annales de l'institut Henri Poincare (B) Probability and Statistics
publication_identifier:
  issn:
  - 0246-0203
publication_status: published
publisher: Institute of Mathematical Statistics
quality_controlled: '1'
scopus_import: '1'
status: public
title: Mesoscopic eigenvalue statistics for Wigner-type matrices
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 61
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '17094'
abstract:
- lang: eng
  text: Contract-based design is a promising methodology for taming the complexity
    of developing sophisticated systems. A formal contract distinguishes between assumptions,
    which are constraints that the designer of a component puts on the environments
    in which the component can be used safely, and guarantees, which are promises
    that the designer asks from the team that implements the component. A theory of
    formal contracts can be formalized as an interface theory, which supports the
    composition and refinement of both assumptions and guarantees. Although there
    is a rich landscape of contract-based design methods that address functional and
    extra-functional properties, we present the first interface theory designed to
    ensure system-wide security properties. Our framework provides a refinement relation
    and a composition operation that support both incremental design and independent
    implementability. We develop our theory for both stateless and stateful interfaces.
    Additionally, we introduce information-flow contracts where assumptions and guarantees
    are sets of flow relations. We use these contracts to illustrate how to enrich
    information-flow interfaces with a semantic view. We illustrate the applicability
    of our framework with two examples inspired by the automotive domain.
acknowledgement: This project has received funding from the European Union’s Horizon
  2020 research and innovation programme under grant agreement No 956123 and it was
  funded in part by the Austrian Science Fund (FWF) project W1255-N23, by the Austrian
  FWF project ZK-35, by the FWF project SpyCoDe 10.55776/F85 and by the ERC-2020-AdG
  101020093. This paper extends the text and the results of the manuscript published
  at FASE 2022 [1].
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Ezio
  full_name: Bartocci, Ezio
  last_name: Bartocci
- first_name: Thomas
  full_name: Ferrere, Thomas
  id: 40960E6E-F248-11E8-B48F-1D18A9856A87
  last_name: Ferrere
  orcid: 0000-0001-5199-3143
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000-0002-2985-7724
- first_name: Dejan
  full_name: Nickovic, Dejan
  id: 41BCEE5C-F248-11E8-B48F-1D18A9856A87
  last_name: Nickovic
- first_name: Ana
  full_name: Oliveira da Costa, Ana
  id: f347ec37-6676-11ee-b395-a888cb7b4fb4
  last_name: Oliveira da Costa
  orcid: 0000-0002-8741-5799
citation:
  ama: Bartocci E, Ferrere T, Henzinger TA, Nickovic D, Oliveira da Costa A. Information-flow
    interfaces. <i>Formal Methods in System Design</i>. 2025;66:3-48. doi:<a href="https://doi.org/10.1007/s10703-024-00447-0">10.1007/s10703-024-00447-0</a>
  apa: Bartocci, E., Ferrere, T., Henzinger, T. A., Nickovic, D., &#38; Oliveira da
    Costa, A. (2025). Information-flow interfaces. <i>Formal Methods in System Design</i>.
    Springer Nature. <a href="https://doi.org/10.1007/s10703-024-00447-0">https://doi.org/10.1007/s10703-024-00447-0</a>
  chicago: Bartocci, Ezio, Thomas Ferrere, Thomas A Henzinger, Dejan Nickovic, and
    Ana Oliveira da Costa. “Information-Flow Interfaces.” <i>Formal Methods in System
    Design</i>. Springer Nature, 2025. <a href="https://doi.org/10.1007/s10703-024-00447-0">https://doi.org/10.1007/s10703-024-00447-0</a>.
  ieee: E. Bartocci, T. Ferrere, T. A. Henzinger, D. Nickovic, and A. Oliveira da
    Costa, “Information-flow interfaces,” <i>Formal Methods in System Design</i>,
    vol. 66. Springer Nature, pp. 3–48, 2025.
  ista: Bartocci E, Ferrere T, Henzinger TA, Nickovic D, Oliveira da Costa A. 2025.
    Information-flow interfaces. Formal Methods in System Design. 66, 3–48.
  mla: Bartocci, Ezio, et al. “Information-Flow Interfaces.” <i>Formal Methods in
    System Design</i>, vol. 66, Springer Nature, 2025, pp. 3–48, doi:<a href="https://doi.org/10.1007/s10703-024-00447-0">10.1007/s10703-024-00447-0</a>.
  short: E. Bartocci, T. Ferrere, T.A. Henzinger, D. Nickovic, A. Oliveira da Costa,
    Formal Methods in System Design 66 (2025) 3–48.
corr_author: '1'
date_created: 2024-06-02T22:00:57Z
date_published: 2025-05-01T00:00:00Z
date_updated: 2025-12-30T06:50:51Z
day: '01'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.1007/s10703-024-00447-0
ec_funded: 1
external_id:
  arxiv:
  - '2002.06465'
  isi:
  - '001230084200001'
file:
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  checksum: 244a71a916103b8ea08e9d0bab32bcd9
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  creator: dernst
  date_created: 2025-12-30T06:50:12Z
  date_updated: 2025-12-30T06:50:12Z
  file_id: '20879'
  file_name: 2025_FormalMethodsSysDesign_Bartocci.pdf
  file_size: 3860690
  relation: main_file
  success: 1
file_date_updated: 2025-12-30T06:50:12Z
has_accepted_license: '1'
intvolume: '        66'
isi: 1
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
page: 3-48
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
  call_identifier: H2020
  grant_number: '101020093'
  name: Vigilant Algorithmic Monitoring of Software
- _id: 34a1b658-11ca-11ed-8bc3-c75229f0241e
  grant_number: F8502
  name: Interface Theory for Security and Privacy
publication: Formal Methods in System Design
publication_identifier:
  eissn:
  - 1572-8102
  issn:
  - 0925-9856
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
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  - id: '11355'
    relation: shorter_version
    status: public
scopus_import: '1'
status: public
title: Information-flow interfaces
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 66
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '17149'
abstract:
- lang: eng
  text: The approximation of a circle with the edges of a fine square grid distorts
    the perimeter by a factor about 4/Pi. We prove that this factor is the same on
    average (in the ergodic sense) for approximations of any rectifiable curve by
    the edges of any non-exotic Delaunay mosaic (known as Voronoi path), and extend
    the results to all dimensions, generalizing Voronoi paths to Voronoi scapes.
acknowledgement: "The authors thank Ranita Biswas and Tatiana Ezubova for the collaboration
  on computational experiments that motivated the work reported in this paper. The
  authors also thank Daniel Bonnema for proofreading and noticing an issue with the
  original proof of Lemma 4.3.\r\nOpen access funding provided by Institute of Science
  and Technology (IST Austria).\r\nThis project has received funding from the European
  Research Council (ERC) under the European Union’s Horizon 2020 research and innovation
  programme, Grant No. 788183, from the Wittgenstein Prize, Austrian Science Fund
  (FWF), Grant No. Z 342-N31, and from the DFG Collaborative Research Center TRR 109,
  ‘Discretization in Geometry and Dynamics’, Austrian Science Fund (FWF), Grant No.
  I 02979-N35."
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Herbert
  full_name: Edelsbrunner, Herbert
  id: 3FB178DA-F248-11E8-B48F-1D18A9856A87
  last_name: Edelsbrunner
  orcid: 0000-0002-9823-6833
- first_name: Anton
  full_name: Nikitenko, Anton
  id: 3E4FF1BA-F248-11E8-B48F-1D18A9856A87
  last_name: Nikitenko
  orcid: 0000-0002-0659-3201
citation:
  ama: Edelsbrunner H, Nikitenko A. Average and expected distortion of Voronoi paths
    and scapes. <i>Discrete &#38; Computational Geometry</i>. 2025;73:490-499. doi:<a
    href="https://doi.org/10.1007/s00454-024-00660-y">10.1007/s00454-024-00660-y</a>
  apa: Edelsbrunner, H., &#38; Nikitenko, A. (2025). Average and expected distortion
    of Voronoi paths and scapes. <i>Discrete &#38; Computational Geometry</i>. Springer
    Nature. <a href="https://doi.org/10.1007/s00454-024-00660-y">https://doi.org/10.1007/s00454-024-00660-y</a>
  chicago: Edelsbrunner, Herbert, and Anton Nikitenko. “Average and Expected Distortion
    of Voronoi Paths and Scapes.” <i>Discrete &#38; Computational Geometry</i>. Springer
    Nature, 2025. <a href="https://doi.org/10.1007/s00454-024-00660-y">https://doi.org/10.1007/s00454-024-00660-y</a>.
  ieee: H. Edelsbrunner and A. Nikitenko, “Average and expected distortion of Voronoi
    paths and scapes,” <i>Discrete &#38; Computational Geometry</i>, vol. 73. Springer
    Nature, pp. 490–499, 2025.
  ista: Edelsbrunner H, Nikitenko A. 2025. Average and expected distortion of Voronoi
    paths and scapes. Discrete &#38; Computational Geometry. 73, 490–499.
  mla: Edelsbrunner, Herbert, and Anton Nikitenko. “Average and Expected Distortion
    of Voronoi Paths and Scapes.” <i>Discrete &#38; Computational Geometry</i>, vol.
    73, Springer Nature, 2025, pp. 490–99, doi:<a href="https://doi.org/10.1007/s00454-024-00660-y">10.1007/s00454-024-00660-y</a>.
  short: H. Edelsbrunner, A. Nikitenko, Discrete &#38; Computational Geometry 73 (2025)
    490–499.
corr_author: '1'
date_created: 2024-06-16T22:01:07Z
date_published: 2025-03-01T00:00:00Z
date_updated: 2026-02-16T12:18:50Z
day: '01'
ddc:
- '510'
department:
- _id: HeEd
doi: 10.1007/s00454-024-00660-y
ec_funded: 1
external_id:
  arxiv:
  - '2012.03350'
  isi:
  - '001238566200004'
  pmid:
  - '39974750'
file:
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  checksum: ffb0c818222138f9f113f4bbea41e834
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  creator: dernst
  date_created: 2025-04-23T07:31:32Z
  date_updated: 2025-04-23T07:31:32Z
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  file_size: 283443
  relation: main_file
  success: 1
file_date_updated: 2025-04-23T07:31:32Z
has_accepted_license: '1'
intvolume: '        73'
isi: 1
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
page: 490-499
pmid: 1
project:
- _id: 266A2E9E-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '788183'
  name: Alpha Shape Theory Extended
- _id: 268116B8-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: Z00342
  name: Mathematics, Computer Science
- _id: 2561EBF4-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: I02979-N35
  name: Persistence and stability of geometric complexes
publication: Discrete & Computational Geometry
publication_identifier:
  eissn:
  - 1432-0444
  issn:
  - 0179-5376
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Average and expected distortion of Voronoi paths and scapes
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 73
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '18449'
abstract:
- lang: eng
  text: "Research involving human subjects or identifiable human material and data
    must be assessed by an ethics committee. The Karl Landsteiner University of Health
    Sciences has established a Commission on Ethics and Scientific Integrity to evaluate
    medical research conducted by its faculty and students and at its affiliated hospitals.\r\nAll
    projects submitted to the Commission on Ethics and Scientific Integrity between
    2018 and 2023 were analyzed regarding their major characteristics, the duration
    of the evaluation process, and votes issued.\r\nA total of 520 applications were
    electronically submitted during the observation period. Most of the studies were
    retrospective data analyses in the field of oncology, psychology and surgery.
    Most studies included less than 100 volunteers. Of the applications 50% received
    a final vote within 5 months, during which several revision rounds took place.
    Overall, about 77% of votes issued during the observation period were positive
    and 2% were rejections. In 11% files were closed due to withdrawal. In 11% final
    votes were pending at the end of the observation period due to requests for revisions.\r\nOur
    results emphasize the importance of institutional ethics committees using the
    example of the Commission on Ethics and Scientific Integrity at the Karl Landsteiner
    University. Such committees fill a gap in evaluating research not covered by Austrian
    legal regulations. Continuous development of standards, operating procedures,
    and national and international collaborations are required to assess and minimize
    risks to trial subjects and to provide a safe and productive environment for research
    in human medicine and related fields."
acknowledgement: Open access funding provided by Karl Landsteiner University.
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Sophie
  full_name: Schober, Sophie
  id: 80b0a0ef-4b9f-11ec-b119-8d9d94c4a1d8
  last_name: Schober
- first_name: Sascha
  full_name: Klee, Sascha
  last_name: Klee
- first_name: Franz
  full_name: Trautinger, Franz
  last_name: Trautinger
citation:
  ama: 'Schober S, Klee S, Trautinger F. The role of institutional ethics committees
    in Austria: Report of the Commission on Ethics and Scientific Integrity of the
    Karl Landsteiner University of Health Sciences 2018–2023. <i>Wiener Klinische
    Wochenschrift</i>. 2025;137:432-437. doi:<a href="https://doi.org/10.1007/s00508-024-02462-x">10.1007/s00508-024-02462-x</a>'
  apa: 'Schober, S., Klee, S., &#38; Trautinger, F. (2025). The role of institutional
    ethics committees in Austria: Report of the Commission on Ethics and Scientific
    Integrity of the Karl Landsteiner University of Health Sciences 2018–2023. <i>Wiener
    Klinische Wochenschrift</i>. Springer Nature. <a href="https://doi.org/10.1007/s00508-024-02462-x">https://doi.org/10.1007/s00508-024-02462-x</a>'
  chicago: 'Schober, Sophie, Sascha Klee, and Franz Trautinger. “The Role of Institutional
    Ethics Committees in Austria: Report of the Commission on Ethics and Scientific
    Integrity of the Karl Landsteiner University of Health Sciences 2018–2023.” <i>Wiener
    Klinische Wochenschrift</i>. Springer Nature, 2025. <a href="https://doi.org/10.1007/s00508-024-02462-x">https://doi.org/10.1007/s00508-024-02462-x</a>.'
  ieee: 'S. Schober, S. Klee, and F. Trautinger, “The role of institutional ethics
    committees in Austria: Report of the Commission on Ethics and Scientific Integrity
    of the Karl Landsteiner University of Health Sciences 2018–2023,” <i>Wiener Klinische
    Wochenschrift</i>, vol. 137. Springer Nature, pp. 432–437, 2025.'
  ista: 'Schober S, Klee S, Trautinger F. 2025. The role of institutional ethics committees
    in Austria: Report of the Commission on Ethics and Scientific Integrity of the
    Karl Landsteiner University of Health Sciences 2018–2023. Wiener Klinische Wochenschrift.
    137, 432–437.'
  mla: 'Schober, Sophie, et al. “The Role of Institutional Ethics Committees in Austria:
    Report of the Commission on Ethics and Scientific Integrity of the Karl Landsteiner
    University of Health Sciences 2018–2023.” <i>Wiener Klinische Wochenschrift</i>,
    vol. 137, Springer Nature, 2025, pp. 432–37, doi:<a href="https://doi.org/10.1007/s00508-024-02462-x">10.1007/s00508-024-02462-x</a>.'
  short: S. Schober, S. Klee, F. Trautinger, Wiener Klinische Wochenschrift 137 (2025)
    432–437.
corr_author: '1'
date_created: 2024-10-20T22:02:07Z
date_published: 2025-07-01T00:00:00Z
date_updated: 2025-12-30T06:55:59Z
day: '01'
ddc:
- '570'
department:
- _id: PreCl
doi: 10.1007/s00508-024-02462-x
external_id:
  isi:
  - '001329812000001'
file:
- access_level: open_access
  checksum: 321be8a584117feaea9f3feaa28caabd
  content_type: application/pdf
  creator: dernst
  date_created: 2025-12-30T06:54:03Z
  date_updated: 2025-12-30T06:54:03Z
  file_id: '20880'
  file_name: 2025_WrKlinischeWochenschrift_Schober.pdf
  file_size: 580791
  relation: main_file
  success: 1
file_date_updated: 2025-12-30T06:54:03Z
has_accepted_license: '1'
intvolume: '       137'
isi: 1
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 432-437
publication: Wiener Klinische Wochenschrift
publication_identifier:
  eissn:
  - 1613-7671
  issn:
  - 0043-5325
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The role of institutional ethics committees in Austria: Report of the Commission
  on Ethics and Scientific Integrity of the Karl Landsteiner University of Health
  Sciences 2018–2023'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 137
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18478'
abstract:
- lang: eng
  text: For a given graph G=(V,E), we define its \emph{nth subdivision} as the graph
    obtained from G by replacing every edge by a path of length n. We also define
    the \emph{mth power} of G as the graph on vertex set V where we connect every
    pair of vertices at distance at most m in G. In this paper, we study the chromatic
    number of powers of subdivisions of graphs and resolve the case m=n asymptotically.
    In particular, our result confirms a conjecture of Mozafari-Nia and Iradmusa in
    the case m=n=3 in a strong sense.
acknowledgement: "This work was initiated at the annual workshop of the Combinatorics
  and Graph Theory group of Freie Universität Berlin in Wilhelmsaue in September 2023.
  The authors would like to thank the institution for enabling this research. Finally,
  the fourth author would like to thank Tibor Szabó and the Combinatorics and Graph
  Theory group at Freie Universität Berlin for their hospitality during the research
  visit. Additionally, we thank Moharram Iradmusa for bringing the papers [5], [7]
  to our attention. Finally, we thank the anonymous referees for their suggestions
  on the manuscript, which have improved the quality of the document.\r\nM.A.: This
  project has received funding from the European Union’s Horizon 2020 research and
  innovation programme under the Marie Skłodowska-Curie grant agreement No 101034413
  .\r\nS.B.: The research leading to these results was supported by EPSRC, UK, grant
  no. EP/V048287/1. There are no additional data beyond that contained within the
  main manuscript.\r\nS.R.: Funded by the Deutsche Forschungsgemeinschaft (DFG, German
  Research Foundation) under Germany’s Excellence Strategy – The Berlin Mathematics
  Research Center MATH+ (EXC-2046/1, project ID: 390685689).\r\nJ.R. acknowledges
  the support of the Grant PID2020-113082GB-I00 funded by MICIU/AEI/10.13039/501100011033,
  Spain, and the Severo Ochoa and María de Maeztu Program for Centers and Units of
  Excellence in R&D, Spain (CEX2020-001084-M)."
article_processing_charge: Yes (in subscription journal)
article_type: original
arxiv: 1
author:
- first_name: Michael
  full_name: Anastos, Michael
  id: 0b2a4358-bb35-11ec-b7b9-e3279b593dbb
  last_name: Anastos
- first_name: Simona
  full_name: Boyadzhiyska, Simona
  last_name: Boyadzhiyska
- first_name: Silas
  full_name: Rathke, Silas
  last_name: Rathke
- first_name: Juanjo
  full_name: Rué, Juanjo
  last_name: Rué
citation:
  ama: Anastos M, Boyadzhiyska S, Rathke S, Rué J. On the chromatic number of powers
    of subdivisions of graphs. <i>Discrete Applied Mathematics</i>. 2025;360:506-511.
    doi:<a href="https://doi.org/10.1016/j.dam.2024.10.002">10.1016/j.dam.2024.10.002</a>
  apa: Anastos, M., Boyadzhiyska, S., Rathke, S., &#38; Rué, J. (2025). On the chromatic
    number of powers of subdivisions of graphs. <i>Discrete Applied Mathematics</i>.
    Elsevier. <a href="https://doi.org/10.1016/j.dam.2024.10.002">https://doi.org/10.1016/j.dam.2024.10.002</a>
  chicago: Anastos, Michael, Simona Boyadzhiyska, Silas Rathke, and Juanjo Rué. “On
    the Chromatic Number of Powers of Subdivisions of Graphs.” <i>Discrete Applied
    Mathematics</i>. Elsevier, 2025. <a href="https://doi.org/10.1016/j.dam.2024.10.002">https://doi.org/10.1016/j.dam.2024.10.002</a>.
  ieee: M. Anastos, S. Boyadzhiyska, S. Rathke, and J. Rué, “On the chromatic number
    of powers of subdivisions of graphs,” <i>Discrete Applied Mathematics</i>, vol.
    360. Elsevier, pp. 506–511, 2025.
  ista: Anastos M, Boyadzhiyska S, Rathke S, Rué J. 2025. On the chromatic number
    of powers of subdivisions of graphs. Discrete Applied Mathematics. 360, 506–511.
  mla: Anastos, Michael, et al. “On the Chromatic Number of Powers of Subdivisions
    of Graphs.” <i>Discrete Applied Mathematics</i>, vol. 360, Elsevier, 2025, pp.
    506–11, doi:<a href="https://doi.org/10.1016/j.dam.2024.10.002">10.1016/j.dam.2024.10.002</a>.
  short: M. Anastos, S. Boyadzhiyska, S. Rathke, J. Rué, Discrete Applied Mathematics
    360 (2025) 506–511.
corr_author: '1'
date_created: 2024-10-27T23:01:44Z
date_published: 2025-01-15T00:00:00Z
date_updated: 2025-04-14T07:54:56Z
day: '15'
ddc:
- '510'
department:
- _id: MaKw
doi: 10.1016/j.dam.2024.10.002
ec_funded: 1
external_id:
  arxiv:
  - '2404.05542'
  isi:
  - '001343647000001'
file:
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  checksum: bd20a13e56b3ea01daf5e7aca5247c60
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  creator: dernst
  date_created: 2025-01-13T09:25:59Z
  date_updated: 2025-01-13T09:25:59Z
  file_id: '18836'
  file_name: 2025_DiscreteApplMath_Anastos.pdf
  file_size: 441060
  relation: main_file
  success: 1
file_date_updated: 2025-01-13T09:25:59Z
has_accepted_license: '1'
intvolume: '       360'
isi: 1
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
page: 506-511
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: Discrete Applied Mathematics
publication_identifier:
  issn:
  - 0166-218X
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: On the chromatic number of powers of subdivisions of graphs
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 360
year: '2025'
...
---
OA_type: closed access
_id: '18529'
abstract:
- lang: eng
  text: Temporal networks are obtained from time-dependent interactions among individuals,
    whereas the interactions can be emails, phone calls, face-to-face meetings, or
    work collaboration. In this article, a temporal game framework is established,
    in which interactions among rational individuals are embedded into two-player
    games in a time-dependent manner. This allows studying the time-dependent complexity
    and variability of interactions, and the way they affect prosocial behaviors.
    Based on this simple mathematical model, it is found that the level of cooperation
    is promoted when the time of collaboration is equally limited for every individual.
    This observation is confirmed by a series of systematic human experiments on over
    1,400 subjects, forming a foundation for comprehensively describing human temporal
    interactions in collaboration. The research results reveal an important incentive
    for human cooperation, leading to a better understanding of a fascinating aspect
    of human nature in society.
article_processing_charge: No
article_type: original
author:
- first_name: Yichao
  full_name: Zhang, Yichao
  last_name: Zhang
- first_name: Jiasheng
  full_name: Wang, Jiasheng
  last_name: Wang
- first_name: Guanghui
  full_name: Wen, Guanghui
  last_name: Wen
- first_name: Jihong
  full_name: Guan, Jihong
  last_name: Guan
- first_name: Shuigeng
  full_name: Zhou, Shuigeng
  last_name: Zhou
- first_name: Guanrong
  full_name: Chen, Guanrong
  last_name: Chen
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Matjaz
  full_name: Perc, Matjaz
  last_name: Perc
citation:
  ama: Zhang Y, Wang J, Wen G, et al. Limitation of time promotes cooperation in structured
    collaboration systems. <i>IEEE Transactions on Network Science and Engineering</i>.
    2025;12(1):4-12. doi:<a href="https://doi.org/10.1109/TNSE.2024.3481434">10.1109/TNSE.2024.3481434</a>
  apa: Zhang, Y., Wang, J., Wen, G., Guan, J., Zhou, S., Chen, G., … Perc, M. (2025).
    Limitation of time promotes cooperation in structured collaboration systems. <i>IEEE
    Transactions on Network Science and Engineering</i>. IEEE. <a href="https://doi.org/10.1109/TNSE.2024.3481434">https://doi.org/10.1109/TNSE.2024.3481434</a>
  chicago: Zhang, Yichao, Jiasheng Wang, Guanghui Wen, Jihong Guan, Shuigeng Zhou,
    Guanrong Chen, Krishnendu Chatterjee, and Matjaz Perc. “Limitation of Time Promotes
    Cooperation in Structured Collaboration Systems.” <i>IEEE Transactions on Network
    Science and Engineering</i>. IEEE, 2025. <a href="https://doi.org/10.1109/TNSE.2024.3481434">https://doi.org/10.1109/TNSE.2024.3481434</a>.
  ieee: Y. Zhang <i>et al.</i>, “Limitation of time promotes cooperation in structured
    collaboration systems,” <i>IEEE Transactions on Network Science and Engineering</i>,
    vol. 12, no. 1. IEEE, pp. 4–12, 2025.
  ista: Zhang Y, Wang J, Wen G, Guan J, Zhou S, Chen G, Chatterjee K, Perc M. 2025.
    Limitation of time promotes cooperation in structured collaboration systems. IEEE
    Transactions on Network Science and Engineering. 12(1), 4–12.
  mla: Zhang, Yichao, et al. “Limitation of Time Promotes Cooperation in Structured
    Collaboration Systems.” <i>IEEE Transactions on Network Science and Engineering</i>,
    vol. 12, no. 1, IEEE, 2025, pp. 4–12, doi:<a href="https://doi.org/10.1109/TNSE.2024.3481434">10.1109/TNSE.2024.3481434</a>.
  short: Y. Zhang, J. Wang, G. Wen, J. Guan, S. Zhou, G. Chen, K. Chatterjee, M. Perc,
    IEEE Transactions on Network Science and Engineering 12 (2025) 4–12.
date_created: 2024-11-10T23:02:00Z
date_published: 2025-01-01T00:00:00Z
date_updated: 2025-02-27T12:35:48Z
day: '01'
department:
- _id: KrCh
doi: 10.1109/TNSE.2024.3481434
external_id:
  isi:
  - '001385382200040'
intvolume: '        12'
isi: 1
issue: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 4-12
publication: IEEE Transactions on Network Science and Engineering
publication_identifier:
  eissn:
  - 2327-4697
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Limitation of time promotes cooperation in structured collaboration systems
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 12
year: '2025'
...
