---
_id: '1212'
abstract:
- lang: eng
text: 'Plants adjust their growth according to gravity. Gravitropism involves gravity
perception, signal transduction, and asymmetric growth response, with organ bending
as a consequence [1]. Asymmetric growth results from the asymmetric distribution
of the plant-specific signaling molecule auxin [2] that is generated by lateral
transport, mediated in the hypocotyl predominantly by the auxin transporter PIN-FORMED3
(PIN3) [3–5]. Gravity stimulation polarizes PIN3 to the bottom sides of endodermal
cells, correlating with increased auxin accumulation in adjacent tissues at the
lower side of the stimulated organ, where auxin induces cell elongation and, hence,
organ bending. A curvature response allows the hypocotyl to resume straight growth
at a defined angle [6], implying that at some point auxin symmetry is restored
to prevent overbending. Here, we present initial insights into cellular and molecular
mechanisms that lead to the termination of the tropic response. We identified
an auxin feedback on PIN3 polarization as underlying mechanism that restores symmetry
of the PIN3-dependent auxin flow. Thus, two mechanistically distinct PIN3 polarization
events redirect auxin fluxes at different time points of the gravity response:
first, gravity-mediated redirection of PIN3-mediated auxin flow toward the lower
hypocotyl side, where auxin gradually accumulates and promotes growth, and later
PIN3 polarization to the opposite cell side, depleting this auxin maximum to end
the bending. Accordingly, genetic or pharmacological interference with the late
PIN3 polarization prevents termination of the response and leads to hypocotyl
overbending. This observation reveals a role of auxin feedback on PIN polarity
in the termination of the tropic response. © 2016 Elsevier Ltd'
acknowledgement: "We thank Dr. Jie Li (Key Laboratory of Plant Molecular Physiology,
Chinese Academy of Science, China) for the pPIN3::PIN3-GFP/DII::VENUS line and Martine
De Cock for help in preparing the manuscript. This work was supported by the European
Research Council (project ERC-2011-StG-20101109-PSDP), by the Czech Science Foundation
GAČR (GA13-40637S) to J.F., and by the Ministry of Education, Youth and Sports of
the Czech Republic under the project CEITEC 2020 (LQ1601) to H.S.R. H.R. is indebted
to the Agency for Innovation by Science and Technology (IWT) for a predoctoral fellowship.\r\n"
article_processing_charge: No
author:
- first_name: Hana
full_name: Rakusová, Hana
last_name: Rakusová
- first_name: Mohamad
full_name: Abbas, Mohamad
id: 47E8FC1C-F248-11E8-B48F-1D18A9856A87
last_name: Abbas
- first_name: Huibin
full_name: Han, Huibin
id: 31435098-F248-11E8-B48F-1D18A9856A87
last_name: Han
- first_name: Siyuan
full_name: Song, Siyuan
last_name: Song
- first_name: Hélène
full_name: Robert, Hélène
last_name: Robert
- first_name: Jirí
full_name: Friml, Jirí
id: 4159519E-F248-11E8-B48F-1D18A9856A87
last_name: Friml
orcid: 0000-0002-8302-7596
citation:
ama: Rakusová H, Abbas M, Han H, Song S, Robert H, Friml J. Termination of shoot
gravitropic responses by auxin feedback on PIN3 polarity. Current Biology.
2016;26(22):3026-3032. doi:10.1016/j.cub.2016.08.067
apa: Rakusová, H., Abbas, M., Han, H., Song, S., Robert, H., & Friml, J. (2016).
Termination of shoot gravitropic responses by auxin feedback on PIN3 polarity.
Current Biology. Cell Press. https://doi.org/10.1016/j.cub.2016.08.067
chicago: Rakusová, Hana, Mohamad Abbas, Huibin Han, Siyuan Song, Hélène Robert,
and Jiří Friml. “Termination of Shoot Gravitropic Responses by Auxin Feedback
on PIN3 Polarity.” Current Biology. Cell Press, 2016. https://doi.org/10.1016/j.cub.2016.08.067.
ieee: H. Rakusová, M. Abbas, H. Han, S. Song, H. Robert, and J. Friml, “Termination
of shoot gravitropic responses by auxin feedback on PIN3 polarity,” Current
Biology, vol. 26, no. 22. Cell Press, pp. 3026–3032, 2016.
ista: Rakusová H, Abbas M, Han H, Song S, Robert H, Friml J. 2016. Termination of
shoot gravitropic responses by auxin feedback on PIN3 polarity. Current Biology.
26(22), 3026–3032.
mla: Rakusová, Hana, et al. “Termination of Shoot Gravitropic Responses by Auxin
Feedback on PIN3 Polarity.” Current Biology, vol. 26, no. 22, Cell Press,
2016, pp. 3026–32, doi:10.1016/j.cub.2016.08.067.
short: H. Rakusová, M. Abbas, H. Han, S. Song, H. Robert, J. Friml, Current Biology
26 (2016) 3026–3032.
date_created: 2018-12-11T11:50:44Z
date_published: 2016-11-21T00:00:00Z
date_updated: 2025-09-22T09:37:31Z
day: '21'
ddc:
- '581'
department:
- _id: JiFr
doi: 10.1016/j.cub.2016.08.067
ec_funded: 1
external_id:
isi:
- '000388545900020'
file:
- access_level: open_access
checksum: 79ed2498185a027cf51a8f88100379e6
content_type: application/pdf
creator: system
date_created: 2018-12-12T10:09:33Z
date_updated: 2020-07-14T12:44:39Z
file_id: '4757'
file_name: IST-2018-1008-v1+1_Rakusova_CurrBiol_2016_proof.pdf
file_size: 5391923
relation: main_file
file_date_updated: 2020-07-14T12:44:39Z
has_accepted_license: '1'
intvolume: ' 26'
isi: 1
issue: '22'
language:
- iso: eng
month: '11'
oa: 1
oa_version: Submitted Version
page: 3026 - 3032
project:
- _id: 25716A02-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '282300'
name: Polarity and subcellular dynamics in plants
publication: Current Biology
publication_status: published
publisher: Cell Press
publist_id: '6138'
pubrep_id: '1008'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Termination of shoot gravitropic responses by auxin feedback on PIN3 polarity
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 26
year: '2016'
...
---
_id: '1214'
abstract:
- lang: eng
text: 'With the accelerated development of robot technologies, optimal control becomes
one of the central themes of research. In traditional approaches, the controller,
by its internal functionality, finds appropriate actions on the basis of the history
of sensor values, guided by the goals, intentions, objectives, learning schemes,
and so forth. While very successful with classical robots, these methods run into
severe difficulties when applied to soft robots, a new field of robotics with
large interest for human-robot interaction. We claim that a novel controller paradigm
opens new perspective for this field. This paper applies a recently developed
neuro controller with differential extrinsic synaptic plasticity to a muscle-tendon
driven arm-shoulder system from the Myorobotics toolkit. In the experiments, we
observe a vast variety of self-organized behavior patterns: when left alone, the
arm realizes pseudo-random sequences of different poses. By applying physical
forces, the system can be entrained into definite motion patterns like wiping
a table. Most interestingly, after attaching an object, the controller gets in
a functional resonance with the object''s internal dynamics, starting to shake
spontaneously bottles half-filled with water or sensitively driving an attached
pendulum into a circular mode. When attached to the crank of a wheel the neural
system independently develops to rotate it. In this way, the robot discovers affordances
of objects its body is interacting with.'
acknowledgement: RD thanks for the hospitality at the Max-Planck-Institute and for
helpful discussions with Nihat Ay and Keyan Zahedi.
article_number: '7759138'
author:
- first_name: Georg S
full_name: Martius, Georg S
id: 3A276B68-F248-11E8-B48F-1D18A9856A87
last_name: Martius
- first_name: Raphael
full_name: Hostettler, Raphael
last_name: Hostettler
- first_name: Alois
full_name: Knoll, Alois
last_name: Knoll
- first_name: Ralf
full_name: Der, Ralf
last_name: Der
citation:
ama: 'Martius GS, Hostettler R, Knoll A, Der R. Compliant control for soft robots:
Emergent behavior of a tendon driven anthropomorphic arm. In: Vol 2016-November.
IEEE; 2016. doi:10.1109/IROS.2016.7759138'
apa: 'Martius, G. S., Hostettler, R., Knoll, A., & Der, R. (2016). Compliant
control for soft robots: Emergent behavior of a tendon driven anthropomorphic
arm (Vol. 2016–November). Presented at the IEEE RSJ International Conference on
Intelligent Robots and Systems IROS , Daejeon, Korea: IEEE. https://doi.org/10.1109/IROS.2016.7759138'
chicago: 'Martius, Georg S, Raphael Hostettler, Alois Knoll, and Ralf Der. “Compliant
Control for Soft Robots: Emergent Behavior of a Tendon Driven Anthropomorphic
Arm,” Vol. 2016–November. IEEE, 2016. https://doi.org/10.1109/IROS.2016.7759138.'
ieee: 'G. S. Martius, R. Hostettler, A. Knoll, and R. Der, “Compliant control for
soft robots: Emergent behavior of a tendon driven anthropomorphic arm,” presented
at the IEEE RSJ International Conference on Intelligent Robots and Systems IROS
, Daejeon, Korea, 2016, vol. 2016–November.'
ista: 'Martius GS, Hostettler R, Knoll A, Der R. 2016. Compliant control for soft
robots: Emergent behavior of a tendon driven anthropomorphic arm. IEEE RSJ International
Conference on Intelligent Robots and Systems IROS vol. 2016–November, 7759138.'
mla: 'Martius, Georg S., et al. Compliant Control for Soft Robots: Emergent Behavior
of a Tendon Driven Anthropomorphic Arm. Vol. 2016–November, 7759138, IEEE,
2016, doi:10.1109/IROS.2016.7759138.'
short: G.S. Martius, R. Hostettler, A. Knoll, R. Der, in:, IEEE, 2016.
conference:
end_date: 2016-09-14
location: Daejeon, Korea
name: 'IEEE RSJ International Conference on Intelligent Robots and Systems IROS '
start_date: 2016-09-09
date_created: 2018-12-11T11:50:45Z
date_published: 2016-11-28T00:00:00Z
date_updated: 2021-01-12T06:49:08Z
day: '28'
department:
- _id: ChLa
- _id: GaTk
doi: 10.1109/IROS.2016.7759138
language:
- iso: eng
month: '11'
oa_version: None
publication_status: published
publisher: IEEE
publist_id: '6121'
quality_controlled: '1'
scopus_import: 1
status: public
title: 'Compliant control for soft robots: Emergent behavior of a tendon driven anthropomorphic
arm'
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 2016-November
year: '2016'
...
---
_id: '1216'
abstract:
- lang: eng
text: 'A framework fo r extracting features in 2D transient flows, based on the
acceleration field to ensure Galilean invariance is proposed in this paper. The
minima of the acceleration magnitude (a superset of acceleration zeros) are extracted
and discriminated into vortices and saddle points, based on the spectral properties
of the velocity Jacobian. The extraction of topological features is performed
with purely combinatorial algorithms from discrete computational topology. The
feature points are prioritized with persistence, as a physically meaningful importance
measure. These feature points are tracked in time with a robust algorithm for
tracking features. Thus, a space-time hierarchy of the minima is built and vortex
merging events are detected. We apply the acceleration feature extraction strategy
to three two-dimensional shear flows: (1) an incompressible periodic cylinder
wake, (2) an incompressible planar mixing layer and (3) a weakly compressible
planar jet. The vortex-like acceleration feature points are shown to be well aligned
with acceleration zeros, maxima of the vorticity magnitude, minima of the pressure
field and minima of λ2.'
acknowledgement: "The authors acknowledge funding of the German Re-\r\nsearch Foundation
\ (DFG) via the Collaborative Re-\r\nsearch Center (SFB 557) \\Control of
\ Complex Turbu-\r\nlent Shear Flows\" and the Emmy Noether Program.\r\nFurther
\ funding was provided by the Zuse Institute\r\nBerlin (ZIB), the DFG-CNRS
\ research group \\Noise\r\nGeneration in Turbulent Flows\" (2003{2010), the Chaire\r\nd'Excellence
'Closed-loop control of turbulent shear ows\r\nusing reduced-order models' (TUCOROM)
of the French\r\nAgence Nationale de la Recherche (ANR), and the Eu-\r\nropean Social
\ Fund (ESF App. No. 100098251). We\r\nthank the Ambrosys Ltd. Society
\ for Complex Sys-\r\ntems Management and the Bernd R. Noack Cybernet-\r\nics
\ Foundation for additional support. A part of this\r\nwork was performed
using HPC resources from GENCI-[CCRT/CINES/IDRIS] supported by the Grant 2011-\r\n[x2011020912"
author:
- first_name: Jens
full_name: Kasten, Jens
last_name: Kasten
- first_name: Jan
full_name: Reininghaus, Jan
id: 4505473A-F248-11E8-B48F-1D18A9856A87
last_name: Reininghaus
- first_name: Ingrid
full_name: Hotz, Ingrid
last_name: Hotz
- first_name: Hans
full_name: Hege, Hans
last_name: Hege
- first_name: Bernd
full_name: Noack, Bernd
last_name: Noack
- first_name: Guillaume
full_name: Daviller, Guillaume
last_name: Daviller
- first_name: Marek
full_name: Morzyński, Marek
last_name: Morzyński
citation:
ama: Kasten J, Reininghaus J, Hotz I, et al. Acceleration feature points of unsteady
shear flows. Archives of Mechanics. 2016;68(1):55-80.
apa: Kasten, J., Reininghaus, J., Hotz, I., Hege, H., Noack, B., Daviller, G., &
Morzyński, M. (2016). Acceleration feature points of unsteady shear flows. Archives
of Mechanics. Polish Academy of Sciences Publishing House.
chicago: Kasten, Jens, Jan Reininghaus, Ingrid Hotz, Hans Hege, Bernd Noack, Guillaume
Daviller, and Marek Morzyński. “Acceleration Feature Points of Unsteady Shear
Flows.” Archives of Mechanics. Polish Academy of Sciences Publishing House,
2016.
ieee: J. Kasten et al., “Acceleration feature points of unsteady shear flows,”
Archives of Mechanics, vol. 68, no. 1. Polish Academy of Sciences Publishing
House, pp. 55–80, 2016.
ista: Kasten J, Reininghaus J, Hotz I, Hege H, Noack B, Daviller G, Morzyński M.
2016. Acceleration feature points of unsteady shear flows. Archives of Mechanics.
68(1), 55–80.
mla: Kasten, Jens, et al. “Acceleration Feature Points of Unsteady Shear Flows.”
Archives of Mechanics, vol. 68, no. 1, Polish Academy of Sciences Publishing
House, 2016, pp. 55–80.
short: J. Kasten, J. Reininghaus, I. Hotz, H. Hege, B. Noack, G. Daviller, M. Morzyński,
Archives of Mechanics 68 (2016) 55–80.
date_created: 2018-12-11T11:50:46Z
date_published: 2016-01-01T00:00:00Z
date_updated: 2021-01-12T06:49:09Z
day: '01'
department:
- _id: HeEd
intvolume: ' 68'
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: http://am.ippt.pan.pl/am/article/viewFile/v68p55/pdf
month: '01'
oa: 1
oa_version: Published Version
page: 55 - 80
publication: Archives of Mechanics
publication_status: published
publisher: Polish Academy of Sciences Publishing House
publist_id: '6118'
quality_controlled: '1'
scopus_import: 1
status: public
title: Acceleration feature points of unsteady shear flows
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 68
year: '2016'
...
---
_id: '1217'
abstract:
- lang: eng
text: Understanding the regulation of T-cell responses during inflammation and auto-immunity
is fundamental for designing efficient therapeutic strategies against immune diseases.
In this regard, prostaglandin E 2 (PGE 2) is mostly considered a myeloid-derived
immunosuppressive molecule. We describe for the first time that T cells secrete
PGE 2 during T-cell receptor stimulation. In addition, we show that autocrine
PGE 2 signaling through EP receptors is essential for optimal CD4 + T-cell activation
in vitro and in vivo, and for T helper 1 (Th1) and regulatory T cell differentiation.
PGE 2 was found to provide additive co-stimulatory signaling through AKT activation.
Intravital multiphoton microscopy showed that triggering EP receptors in T cells
is also essential for the stability of T cell-dendritic cell (DC) interactions
and Th-cell accumulation in draining lymph nodes (LNs) during inflammation. We
further demonstrated that blocking EP receptors in T cells during the initial
phase of collagen-induced arthritis in mice resulted in a reduction of clinical
arthritis. This could be attributable to defective T-cell activation, accompanied
by a decline in activated and interferon-γ-producing CD4 + Th1 cells in draining
LNs. In conclusion, we prove that T lymphocytes secret picomolar concentrations
of PGE 2, which in turn provide additive co-stimulatory signaling, enabling T
cells to attain a favorable activation threshold. PGE 2 signaling in T cells is
also required for maintaining long and stable interactions with DCs within LNs.
Blockade of EP receptors in vivo impairs T-cell activation and development of
T cell-mediated inflammatory responses. This may have implications in various
pathophysiological settings.
acknowledgement: This manuscript has been supported by grants SAF2007-61716 and S-SAL-0159/2006
awarded by the Spanish Ministry of Science and Education and the Community of Madrid
to Dr M Fresno.
article_processing_charge: No
author:
- first_name: Vinatha
full_name: Sreeramkumar, Vinatha
last_name: Sreeramkumar
- first_name: Miroslav
full_name: Hons, Miroslav
id: 4167FE56-F248-11E8-B48F-1D18A9856A87
last_name: Hons
orcid: 0000-0002-6625-3348
- first_name: Carmen
full_name: Punzón, Carmen
last_name: Punzón
- first_name: Jens
full_name: Stein, Jens
last_name: Stein
- first_name: David
full_name: Sancho, David
last_name: Sancho
- first_name: Manuel
full_name: Fresno Forcelledo, Manuel
last_name: Fresno Forcelledo
- first_name: Natalia
full_name: Cuesta, Natalia
last_name: Cuesta
citation:
ama: Sreeramkumar V, Hons M, Punzón C, et al. Efficient T-cell priming and activation
requires signaling through prostaglandin E2 (EP) receptors. Immunology and
Cell Biology. 2016;94(1):39-51. doi:10.1038/icb.2015.62
apa: Sreeramkumar, V., Hons, M., Punzón, C., Stein, J., Sancho, D., Fresno Forcelledo,
M., & Cuesta, N. (2016). Efficient T-cell priming and activation requires
signaling through prostaglandin E2 (EP) receptors. Immunology and Cell Biology.
Nature Publishing Group. https://doi.org/10.1038/icb.2015.62
chicago: Sreeramkumar, Vinatha, Miroslav Hons, Carmen Punzón, Jens Stein, David
Sancho, Manuel Fresno Forcelledo, and Natalia Cuesta. “Efficient T-Cell Priming
and Activation Requires Signaling through Prostaglandin E2 (EP) Receptors.” Immunology
and Cell Biology. Nature Publishing Group, 2016. https://doi.org/10.1038/icb.2015.62.
ieee: V. Sreeramkumar et al., “Efficient T-cell priming and activation requires
signaling through prostaglandin E2 (EP) receptors,” Immunology and Cell Biology,
vol. 94, no. 1. Nature Publishing Group, pp. 39–51, 2016.
ista: Sreeramkumar V, Hons M, Punzón C, Stein J, Sancho D, Fresno Forcelledo M,
Cuesta N. 2016. Efficient T-cell priming and activation requires signaling through
prostaglandin E2 (EP) receptors. Immunology and Cell Biology. 94(1), 39–51.
mla: Sreeramkumar, Vinatha, et al. “Efficient T-Cell Priming and Activation Requires
Signaling through Prostaglandin E2 (EP) Receptors.” Immunology and Cell Biology,
vol. 94, no. 1, Nature Publishing Group, 2016, pp. 39–51, doi:10.1038/icb.2015.62.
short: V. Sreeramkumar, M. Hons, C. Punzón, J. Stein, D. Sancho, M. Fresno Forcelledo,
N. Cuesta, Immunology and Cell Biology 94 (2016) 39–51.
date_created: 2018-12-11T11:50:46Z
date_published: 2016-01-01T00:00:00Z
date_updated: 2025-09-22T09:34:26Z
day: '01'
department:
- _id: MiSi
doi: 10.1038/icb.2015.62
external_id:
isi:
- '000367628600005'
intvolume: ' 94'
isi: 1
issue: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 39 - 51
publication: Immunology and Cell Biology
publication_status: published
publisher: Nature Publishing Group
publist_id: '6116'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Efficient T-cell priming and activation requires signaling through prostaglandin
E2 (EP) receptors
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 94
year: '2016'
...
---
_id: '1218'
abstract:
- lang: eng
text: Investigating the physiology of cyanobacteria cultured under a diel light
regime is relevant for a better understanding of the resulting growth characteristics
and for specific biotechnological applications that are foreseen for these photosynthetic
organisms. Here, we present the results of a multiomics study of the model cyanobacterium
Synechocystis sp. strain PCC 6803, cultured in a lab-scale photobioreactor in
physiological conditions relevant for large-scale culturing. The culture was sparged
withN2 andCO2, leading to an anoxic environment during the dark period. Growth
followed the availability of light. Metabolite analysis performed with 1Hnuclear
magnetic resonance analysis showed that amino acids involved in nitrogen and sulfur
assimilation showed elevated levels in the light. Most protein levels, analyzed
through mass spectrometry, remained rather stable. However, several high-light-response
proteins and stress-response proteins showed distinct changes at the onset of
the light period. Microarray-based transcript analysis found common patterns of~56%
of the transcriptome following the diel regime. These oscillating transcripts
could be grouped coarsely into genes that were upregulated and downregulated in
the dark period. The accumulated glycogen was degraded in the anaerobic environment
in the dark. A small part was degraded gradually, reflecting basic maintenance
requirements of the cells in darkness. Surprisingly, the largest part was degraded
rapidly in a short time span at the end of the dark period. This degradation could
allow rapid formation of metabolic intermediates at the end of the dark period,
preparing the cells for the resumption of growth at the start of the light period.
acknowledgement: "Dutch Ministry of Economic Affairs, Agriculture, and Innovation
through the program BioSolar CellsS. Andreas Angermayr,Pascal van Alphen, Klaas
J. Hellingwerf\r\nWe thank Naira Quintana (presently at Rousselot, Belgium) for
the ini-\r\ntiative at the 10th Cyanobacterial Molecular Biology Workshop\r\n(CMBW),
June 2010, Lake Arrowhead, Los Angeles, CA, USA, to start the\r\ncollaborative endeavor
reported here. We thank Timo Maarleveld from\r\nCWI/VU (Amsterdam) for a custom-made
Python script handling the output from the NMR analysis and for evaluating and visualizing
the\r\nseparate metabolites for their evaluation. We thank Rob Verpoorte from\r\nLeiden
University (metabolome analysis) and Hans Aerts from the AMC\r\n(proteome analysis)
for lab space and equipment. We thank Robert Leh-\r\nmann (Humboldt University Berlin)
and Ilka Axmann (University of\r\nDüsseldorf) for sharing the R-code for the LOS
transformation of the\r\ntranscript data. We thank Hans C. P. Matthijs from IBED
for inspiring\r\ndialogues and insightful thoughts on continuous culturing of cyanobac-\r\nteria.
We thank Sandra Waaijenborg for performing the transcript nor-\r\nmalization and
Johan Westerhuis from BDA, Jeroen van der Steen and\r\nFilipe Branco dos Santos
from MMP, and Lucas Stal from IBED/NIOZ for\r\nhelpful discussions. We thank Milou
Schuurmans from MMP for help\r\nwith sampling and glycogen determination. We thank
the members of the\r\nRNA Biology & Applied Bioinformatics group at SILS, in particular
Selina\r\nvan Leeuwen, Elisa Hoekstra, and Martijs Jonker, for the microarray anal-\r\nysis.
We thank the reviewers of this work for their insightful comments\r\nwhich improved
the quality of the manuscript. This work, including the efforts of S. Andreas Angermayr,
Pascal van\r\nAlphen, and Klaas J. Hellingwerf, was funded by Dutch Ministry of
Eco-\r\nnomic Affairs, Agriculture, and Innovation through the program BioSolar\r\nCells."
article_processing_charge: No
author:
- first_name: Andreas
full_name: Angermayr, Andreas
id: 4677C796-F248-11E8-B48F-1D18A9856A87
last_name: Angermayr
orcid: 0000-0001-8619-2223
- first_name: Pascal
full_name: Van Alphen, Pascal
last_name: Van Alphen
- first_name: Dicle
full_name: Hasdemir, Dicle
last_name: Hasdemir
- first_name: Gertjan
full_name: Kramer, Gertjan
last_name: Kramer
- first_name: Muzamal
full_name: Iqbal, Muzamal
last_name: Iqbal
- first_name: Wilmar
full_name: Van Grondelle, Wilmar
last_name: Van Grondelle
- first_name: Huub
full_name: Hoefsloot, Huub
last_name: Hoefsloot
- first_name: Younghae
full_name: Choi, Younghae
last_name: Choi
- first_name: Klaas
full_name: Hellingwerf, Klaas
last_name: Hellingwerf
citation:
ama: Angermayr A, Van Alphen P, Hasdemir D, et al. Culturing synechocystis sp. Strain
pcc 6803 with N2 and CO2 in a diel regime reveals multiphase glycogen dynamics
with low maintenance costs. Applied and Environmental Microbiology. 2016;82(14):4180-4189.
doi:10.1128/AEM.00256-16
apa: Angermayr, A., Van Alphen, P., Hasdemir, D., Kramer, G., Iqbal, M., Van Grondelle,
W., … Hellingwerf, K. (2016). Culturing synechocystis sp. Strain pcc 6803 with
N2 and CO2 in a diel regime reveals multiphase glycogen dynamics with low maintenance
costs. Applied and Environmental Microbiology. American Society for Microbiology.
https://doi.org/10.1128/AEM.00256-16
chicago: Angermayr, Andreas, Pascal Van Alphen, Dicle Hasdemir, Gertjan Kramer,
Muzamal Iqbal, Wilmar Van Grondelle, Huub Hoefsloot, Younghae Choi, and Klaas
Hellingwerf. “Culturing Synechocystis Sp. Strain Pcc 6803 with N2 and CO2 in a
Diel Regime Reveals Multiphase Glycogen Dynamics with Low Maintenance Costs.”
Applied and Environmental Microbiology. American Society for Microbiology,
2016. https://doi.org/10.1128/AEM.00256-16.
ieee: A. Angermayr et al., “Culturing synechocystis sp. Strain pcc 6803 with
N2 and CO2 in a diel regime reveals multiphase glycogen dynamics with low maintenance
costs,” Applied and Environmental Microbiology, vol. 82, no. 14. American
Society for Microbiology, pp. 4180–4189, 2016.
ista: Angermayr A, Van Alphen P, Hasdemir D, Kramer G, Iqbal M, Van Grondelle W,
Hoefsloot H, Choi Y, Hellingwerf K. 2016. Culturing synechocystis sp. Strain pcc
6803 with N2 and CO2 in a diel regime reveals multiphase glycogen dynamics with
low maintenance costs. Applied and Environmental Microbiology. 82(14), 4180–4189.
mla: Angermayr, Andreas, et al. “Culturing Synechocystis Sp. Strain Pcc 6803 with
N2 and CO2 in a Diel Regime Reveals Multiphase Glycogen Dynamics with Low Maintenance
Costs.” Applied and Environmental Microbiology, vol. 82, no. 14, American
Society for Microbiology, 2016, pp. 4180–89, doi:10.1128/AEM.00256-16.
short: A. Angermayr, P. Van Alphen, D. Hasdemir, G. Kramer, M. Iqbal, W. Van Grondelle,
H. Hoefsloot, Y. Choi, K. Hellingwerf, Applied and Environmental Microbiology
82 (2016) 4180–4189.
date_created: 2018-12-11T11:50:46Z
date_published: 2016-07-01T00:00:00Z
date_updated: 2025-09-22T09:35:22Z
day: '01'
department:
- _id: ToBo
doi: 10.1128/AEM.00256-16
external_id:
isi:
- '000379345100012'
intvolume: ' 82'
isi: 1
issue: '14'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4959195/
month: '07'
oa: 1
oa_version: Submitted Version
page: 4180 - 4189
publication: Applied and Environmental Microbiology
publication_status: published
publisher: American Society for Microbiology
publist_id: '6117'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Culturing synechocystis sp. Strain pcc 6803 with N2 and CO2 in a diel regime
reveals multiphase glycogen dynamics with low maintenance costs
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 82
year: '2016'
...
---
_id: '1219'
abstract:
- lang: eng
text: We consider N×N random matrices of the form H = W + V where W is a real symmetric
or complex Hermitian Wigner matrix and V is a random or deterministic, real, diagonal
matrix whose entries are independent of W. We assume subexponential decay for
the matrix entries of W, and we choose V so that the eigenvalues ofW and V are
typically of the same order. For a large class of diagonal matrices V , we show
that the local statistics in the bulk of the spectrum are universal in the limit
of large N.
acknowledgement: "J.C. was supported in part by National Research Foundation of Korea
Grant 2011-0013474 and TJ Park Junior Faculty Fellowship.\r\nK.S. was supported
by ERC Advanced Grant RANMAT, No. 338804, and the \"Fund for Math.\"\r\nB.S. was
supported by NSF GRFP Fellowship DGE-1144152.\r\nH.Y. was supported in part by NSF
Grant DMS-13-07444 and Simons investigator fellowship. We thank Paul Bourgade, László
Erd ̋os and Antti Knowles for helpful comments. We are grateful to the Taida Institute
for Mathematical\r\nSciences and National Taiwan Universality for their hospitality
during part of this\r\nresearch. We thank Thomas Spencer and the Institute for Advanced
Study for their\r\nhospitality during the academic year 2013–2014. "
article_processing_charge: No
arxiv: 1
author:
- first_name: Jioon
full_name: Lee, Jioon
last_name: Lee
- first_name: Kevin
full_name: Schnelli, Kevin
id: 434AD0AE-F248-11E8-B48F-1D18A9856A87
last_name: Schnelli
orcid: 0000-0003-0954-3231
- first_name: Ben
full_name: Stetler, Ben
last_name: Stetler
- first_name: Horngtzer
full_name: Yau, Horngtzer
last_name: Yau
citation:
ama: Lee J, Schnelli K, Stetler B, Yau H. Bulk universality for deformed wigner
matrices. Annals of Probability. 2016;44(3):2349-2425. doi:10.1214/15-AOP1023
apa: Lee, J., Schnelli, K., Stetler, B., & Yau, H. (2016). Bulk universality
for deformed wigner matrices. Annals of Probability. Institute of Mathematical
Statistics. https://doi.org/10.1214/15-AOP1023
chicago: Lee, Jioon, Kevin Schnelli, Ben Stetler, and Horngtzer Yau. “Bulk Universality
for Deformed Wigner Matrices.” Annals of Probability. Institute of Mathematical
Statistics, 2016. https://doi.org/10.1214/15-AOP1023.
ieee: J. Lee, K. Schnelli, B. Stetler, and H. Yau, “Bulk universality for deformed
wigner matrices,” Annals of Probability, vol. 44, no. 3. Institute of Mathematical
Statistics, pp. 2349–2425, 2016.
ista: Lee J, Schnelli K, Stetler B, Yau H. 2016. Bulk universality for deformed
wigner matrices. Annals of Probability. 44(3), 2349–2425.
mla: Lee, Jioon, et al. “Bulk Universality for Deformed Wigner Matrices.” Annals
of Probability, vol. 44, no. 3, Institute of Mathematical Statistics, 2016,
pp. 2349–425, doi:10.1214/15-AOP1023.
short: J. Lee, K. Schnelli, B. Stetler, H. Yau, Annals of Probability 44 (2016)
2349–2425.
date_created: 2018-12-11T11:50:47Z
date_published: 2016-01-01T00:00:00Z
date_updated: 2025-09-22T09:33:43Z
day: '01'
department:
- _id: LaEr
doi: 10.1214/15-AOP1023
ec_funded: 1
external_id:
arxiv:
- '1405.6634'
isi:
- '000376180700016'
intvolume: ' 44'
isi: 1
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1405.6634
month: '01'
oa: 1
oa_version: Preprint
page: 2349 - 2425
project:
- _id: 258DCDE6-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '338804'
name: Random matrices, universality and disordered quantum systems
publication: Annals of Probability
publication_status: published
publisher: Institute of Mathematical Statistics
publist_id: '6115'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Bulk universality for deformed wigner matrices
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 44
year: '2016'
...
---
_id: '122'
abstract:
- lang: eng
text: Four rigid panels connected by hinges that meet at a point form a four-vertex,
the fundamental building block of origami metamaterials. Most materials designed
so far are based on the same four-vertex geometry, and little is known regarding
how different geometries affect folding behavior. Here we systematically categorize
and analyze the geometries and resulting folding motions of Euclidean four-vertices.
Comparing the relative sizes of sector angles, we identify three types of generic
vertices and two accompanying subtypes. We determine which folds can fully close
and the possible mountain-valley assignments. Next, we consider what occurs when
sector angles or sums thereof are set equal, which results in 16 special vertex
types. One of these, flat-foldable vertices, has been studied extensively, but
we show that a wide variety of qualitatively different folding motions exist for
the other 15 special and 3 generic types. Our work establishes a straightforward
set of rules for understanding the folding motion of both generic and special
four-vertices and serves as a roadmap for designing origami metamaterials.
acknowledgement: This work is part of the research programme of the Foundation for
Fundamental Research on Matter (FOM), which is part of the Netherlands Organisation
for Scientific Research (NWO).
article_number: '023003'
arxiv: 1
author:
- first_name: Scott R
full_name: Waitukaitis, Scott R
id: 3A1FFC16-F248-11E8-B48F-1D18A9856A87
last_name: Waitukaitis
orcid: 0000-0002-2299-3176
- first_name: Martin
full_name: Van Hecke, Martin
last_name: Van Hecke
citation:
ama: 'Waitukaitis SR, Van Hecke M. Origami building blocks: Generic and special
four-vertices. Physical Review E - Statistical, Nonlinear, and Soft Matter
Physics. 2016;93(2). doi:10.1103/PhysRevE.93.023003'
apa: 'Waitukaitis, S. R., & Van Hecke, M. (2016). Origami building blocks: Generic
and special four-vertices. Physical Review E - Statistical, Nonlinear, and
Soft Matter Physics. American Physiological Society. https://doi.org/10.1103/PhysRevE.93.023003'
chicago: 'Waitukaitis, Scott R, and Martin Van Hecke. “Origami Building Blocks:
Generic and Special Four-Vertices.” Physical Review E - Statistical, Nonlinear,
and Soft Matter Physics. American Physiological Society, 2016. https://doi.org/10.1103/PhysRevE.93.023003.'
ieee: 'S. R. Waitukaitis and M. Van Hecke, “Origami building blocks: Generic and
special four-vertices,” Physical Review E - Statistical, Nonlinear, and Soft
Matter Physics, vol. 93, no. 2. American Physiological Society, 2016.'
ista: 'Waitukaitis SR, Van Hecke M. 2016. Origami building blocks: Generic and special
four-vertices. Physical Review E - Statistical, Nonlinear, and Soft Matter Physics.
93(2), 023003.'
mla: 'Waitukaitis, Scott R., and Martin Van Hecke. “Origami Building Blocks: Generic
and Special Four-Vertices.” Physical Review E - Statistical, Nonlinear, and
Soft Matter Physics, vol. 93, no. 2, 023003, American Physiological Society,
2016, doi:10.1103/PhysRevE.93.023003.'
short: S.R. Waitukaitis, M. Van Hecke, Physical Review E - Statistical, Nonlinear,
and Soft Matter Physics 93 (2016).
date_created: 2018-12-11T11:44:44Z
date_published: 2016-02-03T00:00:00Z
date_updated: 2021-01-12T06:49:10Z
day: '03'
doi: 10.1103/PhysRevE.93.023003
extern: '1'
external_id:
arxiv:
- '1507.08442'
intvolume: ' 93'
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1507.08442
month: '02'
oa: 1
oa_version: Preprint
publication: Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
publication_status: published
publisher: American Physiological Society
publist_id: '7932'
quality_controlled: '1'
status: public
title: 'Origami building blocks: Generic and special four-vertices'
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 93
year: '2016'
...
---
_id: '1220'
abstract:
- lang: eng
text: Theoretical and numerical aspects of aerodynamic efficiency of propulsion
systems coupled to the boundary layer of a fuselage are studied. We discuss the
effects of local flow fields, which are affected both by conservative flow acceleration
as well as total pressure losses, on the efficiency of boundary layer immersed
propulsion devices. We introduce the concept of a boundary layer retardation turbine
that helps reduce skin friction over the fuselage. We numerically investigate
efficiency gains offered by boundary layer and wake interacting devices. We discuss
the results in terms of a total energy consumption framework and show that efficiency
gains of any device depend on all the other elements of the propulsion system.
author:
- first_name: Gregor
full_name: Mikić, Gregor
last_name: Mikić
- first_name: Alex
full_name: Stoll, Alex
last_name: Stoll
- first_name: Joe
full_name: Bevirt, Joe
last_name: Bevirt
- first_name: Rok
full_name: Grah, Rok
id: 483E70DE-F248-11E8-B48F-1D18A9856A87
last_name: Grah
orcid: 0000-0003-2539-3560
- first_name: Mark
full_name: Moore, Mark
last_name: Moore
citation:
ama: 'Mikić G, Stoll A, Bevirt J, Grah R, Moore M. Fuselage boundary layer ingestion
propulsion applied to a thin haul commuter aircraft for optimal efficiency. In:
AIAA; 2016:1-19. doi:10.2514/6.2016-3764'
apa: 'Mikić, G., Stoll, A., Bevirt, J., Grah, R., & Moore, M. (2016). Fuselage
boundary layer ingestion propulsion applied to a thin haul commuter aircraft for
optimal efficiency (pp. 1–19). Presented at the AIAA: Aviation Technology, Integration,
and Operations Conference, Washington, D.C., USA: AIAA. https://doi.org/10.2514/6.2016-3764'
chicago: Mikić, Gregor, Alex Stoll, Joe Bevirt, Rok Grah, and Mark Moore. “Fuselage
Boundary Layer Ingestion Propulsion Applied to a Thin Haul Commuter Aircraft for
Optimal Efficiency,” 1–19. AIAA, 2016. https://doi.org/10.2514/6.2016-3764.
ieee: 'G. Mikić, A. Stoll, J. Bevirt, R. Grah, and M. Moore, “Fuselage boundary
layer ingestion propulsion applied to a thin haul commuter aircraft for optimal
efficiency,” presented at the AIAA: Aviation Technology, Integration, and Operations
Conference, Washington, D.C., USA, 2016, pp. 1–19.'
ista: 'Mikić G, Stoll A, Bevirt J, Grah R, Moore M. 2016. Fuselage boundary layer
ingestion propulsion applied to a thin haul commuter aircraft for optimal efficiency.
AIAA: Aviation Technology, Integration, and Operations Conference, 1–19.'
mla: Mikić, Gregor, et al. Fuselage Boundary Layer Ingestion Propulsion Applied
to a Thin Haul Commuter Aircraft for Optimal Efficiency. AIAA, 2016, pp. 1–19,
doi:10.2514/6.2016-3764.
short: G. Mikić, A. Stoll, J. Bevirt, R. Grah, M. Moore, in:, AIAA, 2016, pp. 1–19.
conference:
end_date: 2016-06-17
location: Washington, D.C., USA
name: 'AIAA: Aviation Technology, Integration, and Operations Conference'
start_date: 2016-06-13
date_created: 2018-12-11T11:50:47Z
date_published: 2016-06-01T00:00:00Z
date_updated: 2023-02-21T10:17:50Z
day: '01'
department:
- _id: CaGu
- _id: GaTk
doi: 10.2514/6.2016-3764
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://ntrs.nasa.gov/search.jsp?R=20160010167&hterms=Fuselage+boundary+layer+ingestion+propulsion+applied+thin+haul+commuter+aircraft+optimal+efficiency&qs=N%3D0%26Ntk%3DAll%26Ntt%3DFuselage%2520boundary%2520layer%2520ingestion%2520propulsion%2520applied%2520to%2520a%2520thin%2520haul%2520commuter%2520aircraft%2520for%2520optimal%2520efficiency%26Ntx%3Dmode%2520matchallpartial%26Nm%3D123%7CCollection%7CNASA%2520STI%7C%7C17%7CCollection%7CNACA
month: '06'
oa: 1
oa_version: Preprint
page: 1 - 19
publication_status: published
publisher: AIAA
publist_id: '6114'
quality_controlled: '1'
scopus_import: 1
status: public
title: Fuselage boundary layer ingestion propulsion applied to a thin haul commuter
aircraft for optimal efficiency
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
year: '2016'
...
---
_id: '1221'
abstract:
- lang: eng
text: The Auxin Binding Protein 1 (ABP1) is one of the most studied proteins in
plants. Since decades ago, it has been the prime receptor candidate for the plant
hormone auxin with a plethora of described functions in auxin signaling and development.
The developmental importance of ABP1 has recently been questioned by identification
of Arabidopsis thaliana abp1 knock-out alleles that show no obvious phenotypes
under normal growth conditions. In this study, we examined the contradiction between
the normal growth and development of the abp1 knock-outs and the strong morphological
defects observed in three different ethanol-inducible abp1 knock-down mutants
( abp1-AS, SS12K, SS12S). By analyzing segregating populations of abp1 knock-out
vs. abp1 knock-down crosses we show that the strong morphological defects that
were believed to be the result of conditional down-regulation of ABP1 can be reproduced
also in the absence of the functional ABP1 protein. This data suggests that the
phenotypes in abp1 knock-down lines are due to the off-target effects and asks
for further reflections on the biological function of ABP1 or alternative explanations
for the missing phenotypic defects in the abp1 loss-of-function alleles.
acknowledgement: "This work was supported by ERC Independent Research grant (ERC-2011-StG-20101109-PSDP
to JF). JM internship was supported by the grant “Action Austria – Slovakia”. MG
was supported by the scholarship \"Stipendien der Stipendienstiftung der Republik
Österreich\". Work by EH and CPR were supported by ANR blanc ANR-14-CE11-0018. We
would like to thank Mark Estelle and Yunde Zhao for provid\r\n-\r\ning \r\nabp1-c1\r\n,
\r\nabp1-TD1 \r\nand \r\nabp1-WTc1 \r\nseeds. We thank Emeline \r\nHuault for technical
assistance."
article_number: '86'
article_processing_charge: No
article_type: original
author:
- first_name: Jaroslav
full_name: Michalko, Jaroslav
id: 483727CA-F248-11E8-B48F-1D18A9856A87
last_name: Michalko
- first_name: Matous
full_name: Glanc, Matous
id: 1AE1EA24-02D0-11E9-9BAA-DAF4881429F2
last_name: Glanc
orcid: 0000-0003-0619-7783
- first_name: Catherine
full_name: Perrot Rechenmann, Catherine
last_name: Perrot Rechenmann
- first_name: Jirí
full_name: Friml, Jirí
id: 4159519E-F248-11E8-B48F-1D18A9856A87
last_name: Friml
orcid: 0000-0002-8302-7596
citation:
ama: Michalko J, Glanc M, Perrot Rechenmann C, Friml J. Strong morphological defects
in conditional Arabidopsis abp1 knock-down mutants generated in absence of functional
ABP1 protein. F1000 Research . 2016;5. doi:10.12688/f1000research.7654.1
apa: Michalko, J., Glanc, M., Perrot Rechenmann, C., & Friml, J. (2016). Strong
morphological defects in conditional Arabidopsis abp1 knock-down mutants generated
in absence of functional ABP1 protein. F1000 Research . F1000 Research.
https://doi.org/10.12688/f1000research.7654.1
chicago: Michalko, Jaroslav, Matous Glanc, Catherine Perrot Rechenmann, and Jiří
Friml. “Strong Morphological Defects in Conditional Arabidopsis Abp1 Knock-down
Mutants Generated in Absence of Functional ABP1 Protein.” F1000 Research .
F1000 Research, 2016. https://doi.org/10.12688/f1000research.7654.1.
ieee: J. Michalko, M. Glanc, C. Perrot Rechenmann, and J. Friml, “Strong morphological
defects in conditional Arabidopsis abp1 knock-down mutants generated in absence
of functional ABP1 protein,” F1000 Research , vol. 5. F1000 Research, 2016.
ista: Michalko J, Glanc M, Perrot Rechenmann C, Friml J. 2016. Strong morphological
defects in conditional Arabidopsis abp1 knock-down mutants generated in absence
of functional ABP1 protein. F1000 Research . 5, 86.
mla: Michalko, Jaroslav, et al. “Strong Morphological Defects in Conditional Arabidopsis
Abp1 Knock-down Mutants Generated in Absence of Functional ABP1 Protein.” F1000
Research , vol. 5, 86, F1000 Research, 2016, doi:10.12688/f1000research.7654.1.
short: J. Michalko, M. Glanc, C. Perrot Rechenmann, J. Friml, F1000 Research 5
(2016).
date_created: 2018-12-11T11:50:47Z
date_published: 2016-01-20T00:00:00Z
date_updated: 2025-04-15T07:48:02Z
day: '20'
ddc:
- '581'
department:
- _id: JiFr
doi: 10.12688/f1000research.7654.1
ec_funded: 1
file:
- access_level: open_access
checksum: c9e50bb6096a7ba4a832969935820f19
content_type: application/pdf
creator: system
date_created: 2018-12-12T10:15:33Z
date_updated: 2020-07-14T12:44:39Z
file_id: '5154'
file_name: IST-2016-711-v1+1_770cf1e0-612f-4e85-a500-54b6349fbbab_7654_-_jaroslav_michalko.pdf
file_size: 2990459
relation: main_file
file_date_updated: 2020-07-14T12:44:39Z
has_accepted_license: '1'
intvolume: ' 5'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
project:
- _id: 25716A02-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '282300'
name: Polarity and subcellular dynamics in plants
publication: 'F1000 Research '
publication_status: published
publisher: F1000 Research
publist_id: '6113'
pubrep_id: '711'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Strong morphological defects in conditional Arabidopsis abp1 knock-down mutants
generated in absence of functional ABP1 protein
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 5
year: '2016'
...
---
_id: '1222'
abstract:
- lang: eng
text: We consider packings of congruent circles on a square flat torus, i.e., periodic
(w.r.t. a square lattice) planar circle packings, with the maximal circle radius.
This problem is interesting due to a practical reason—the problem of “super resolution
of images.” We have found optimal arrangements for N=6, 7 and 8 circles. Surprisingly,
for the case N=7 there are three different optimal arrangements. Our proof is
based on a computer enumeration of toroidal irreducible contact graphs.
acknowledgement: We wish to thank Alexey Tarasov, Vladislav Volkov and Brittany Fasy
for some useful comments and remarks, and especially Thom Sulanke for modifying
surftri to suit our purposes. Oleg R. Musin was partially supported by the NSF Grant
DMS-1400876 and by the RFBR Grant 15-01-99563. Anton V. Nikitenko was supported
by the Chebyshev Laboratory (Department of Mathematics and Mechanics, St. Petersburg
State University) under RF Government Grant 11.G34.31.0026.
article_processing_charge: No
arxiv: 1
author:
- first_name: Oleg
full_name: Musin, Oleg
last_name: Musin
- first_name: Anton
full_name: Nikitenko, Anton
id: 3E4FF1BA-F248-11E8-B48F-1D18A9856A87
last_name: Nikitenko
orcid: 0000-0002-0659-3201
citation:
ama: Musin O, Nikitenko A. Optimal packings of congruent circles on a square flat
torus. Discrete & Computational Geometry. 2016;55(1):1-20. doi:10.1007/s00454-015-9742-6
apa: Musin, O., & Nikitenko, A. (2016). Optimal packings of congruent circles
on a square flat torus. Discrete & Computational Geometry. Springer.
https://doi.org/10.1007/s00454-015-9742-6
chicago: Musin, Oleg, and Anton Nikitenko. “Optimal Packings of Congruent Circles
on a Square Flat Torus.” Discrete & Computational Geometry. Springer,
2016. https://doi.org/10.1007/s00454-015-9742-6.
ieee: O. Musin and A. Nikitenko, “Optimal packings of congruent circles on a square
flat torus,” Discrete & Computational Geometry, vol. 55, no. 1. Springer,
pp. 1–20, 2016.
ista: Musin O, Nikitenko A. 2016. Optimal packings of congruent circles on a square
flat torus. Discrete & Computational Geometry. 55(1), 1–20.
mla: Musin, Oleg, and Anton Nikitenko. “Optimal Packings of Congruent Circles on
a Square Flat Torus.” Discrete & Computational Geometry, vol. 55, no.
1, Springer, 2016, pp. 1–20, doi:10.1007/s00454-015-9742-6.
short: O. Musin, A. Nikitenko, Discrete & Computational Geometry 55 (2016) 1–20.
date_created: 2018-12-11T11:50:48Z
date_published: 2016-01-01T00:00:00Z
date_updated: 2025-09-22T09:32:23Z
day: '01'
department:
- _id: HeEd
doi: 10.1007/s00454-015-9742-6
external_id:
arxiv:
- '1212.0649'
isi:
- '000367625500001'
intvolume: ' 55'
isi: 1
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1212.0649
month: '01'
oa: 1
oa_version: Preprint
page: 1 - 20
publication: Discrete & Computational Geometry
publication_status: published
publisher: Springer
publist_id: '6111'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Optimal packings of congruent circles on a square flat torus
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 55
year: '2016'
...
---
_id: '1223'
abstract:
- lang: eng
text: We consider a random Schrödinger operator on the binary tree with a random
potential which is the sum of a random radially symmetric potential, Qr, and a
random transversally periodic potential, κQt, with coupling constant κ. Using
a new one-dimensional dynamical systems approach combined with Jensen's inequality
in hyperbolic space (our key estimate) we obtain a fractional moment estimate
proving localization for small and large κ. Together with a previous result we
therefore obtain a model with two Anderson transitions, from localization to delocalization
and back to localization, when increasing κ. As a by-product we also have a partially
new proof of one-dimensional Anderson localization at any disorder.
article_processing_charge: No
arxiv: 1
author:
- first_name: Richard
full_name: Froese, Richard
last_name: Froese
- first_name: Darrick
full_name: Lee, Darrick
last_name: Lee
- first_name: Christian
full_name: Sadel, Christian
id: 4760E9F8-F248-11E8-B48F-1D18A9856A87
last_name: Sadel
orcid: 0000-0001-8255-3968
- first_name: Wolfgang
full_name: Spitzer, Wolfgang
last_name: Spitzer
- first_name: Günter
full_name: Stolz, Günter
last_name: Stolz
citation:
ama: Froese R, Lee D, Sadel C, Spitzer W, Stolz G. Localization for transversally
periodic random potentials on binary trees. Journal of Spectral Theory.
2016;6(3):557-600. doi:10.4171/JST/132
apa: Froese, R., Lee, D., Sadel, C., Spitzer, W., & Stolz, G. (2016). Localization
for transversally periodic random potentials on binary trees. Journal of Spectral
Theory. European Mathematical Society. https://doi.org/10.4171/JST/132
chicago: Froese, Richard, Darrick Lee, Christian Sadel, Wolfgang Spitzer, and Günter
Stolz. “Localization for Transversally Periodic Random Potentials on Binary Trees.”
Journal of Spectral Theory. European Mathematical Society, 2016. https://doi.org/10.4171/JST/132.
ieee: R. Froese, D. Lee, C. Sadel, W. Spitzer, and G. Stolz, “Localization for transversally
periodic random potentials on binary trees,” Journal of Spectral Theory,
vol. 6, no. 3. European Mathematical Society, pp. 557–600, 2016.
ista: Froese R, Lee D, Sadel C, Spitzer W, Stolz G. 2016. Localization for transversally
periodic random potentials on binary trees. Journal of Spectral Theory. 6(3),
557–600.
mla: Froese, Richard, et al. “Localization for Transversally Periodic Random Potentials
on Binary Trees.” Journal of Spectral Theory, vol. 6, no. 3, European Mathematical
Society, 2016, pp. 557–600, doi:10.4171/JST/132.
short: R. Froese, D. Lee, C. Sadel, W. Spitzer, G. Stolz, Journal of Spectral Theory
6 (2016) 557–600.
date_created: 2018-12-11T11:50:48Z
date_published: 2016-01-01T00:00:00Z
date_updated: 2025-09-22T09:32:55Z
day: '01'
department:
- _id: LaEr
doi: 10.4171/JST/132
external_id:
arxiv:
- '1408.3961'
isi:
- '000388627000004'
intvolume: ' 6'
isi: 1
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1408.3961
month: '01'
oa: 1
oa_version: Preprint
page: 557 - 600
publication: Journal of Spectral Theory
publication_status: published
publisher: European Mathematical Society
publist_id: '6112'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Localization for transversally periodic random potentials on binary trees
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 6
year: '2016'
...
---
_id: '1224'
abstract:
- lang: eng
text: Sexual dimorphism in resource allocation is expected to change during the
life cycle of dioecious plants because of temporal differences between the sexes
in reproductive investment. Given the potential for sex-specific differences in
reproductive costs, resource availability may contribute to variation in reproductive
allocation in females and males. Here, we used Rumex hastatulus, a dioecious,
wind-pollinated annual plant, to investigate whether sexual dimorphism varies
with life-history stage and nutrient availability, and determine whether allocation
patterns differ depending on reproductive commitment. To examine if the costs
of reproduction varied between the sexes, reproduction was either allowed or prevented
through bud removal, and biomass allocation was measured at maturity. In a second
experiment to assess variation in sexual dimorphism across the life cycle, and
whether this varied with resource availability, plants were grown in high and
low nutrients and allocation to roots, aboveground vegetative growth and reproduction
were measured at three developmental stages. Males prevented from reproducing
compensated with increased above- and belowground allocation to a much larger
degree than females, suggesting that male reproductive costs reduce vegetative
growth. The proportional allocation to roots, reproductive structures and aboveground
vegetative growth varied between the sexes and among life-cycle stages, but not
with nutrient treatment. Females allocated proportionally more resources to roots
than males at peak flowering, but this pattern was reversed at reproductive maturity
under low-nutrient conditions. Our study illustrates the importance of temporal
dynamics in sex-specific resource allocation and provides support for high male
reproductive costs in wind-pollinated plants.
article_processing_charge: No
author:
- first_name: Zachary
full_name: Teitel, Zachary
last_name: Teitel
- first_name: Melinda
full_name: Pickup, Melinda
id: 2C78037E-F248-11E8-B48F-1D18A9856A87
last_name: Pickup
orcid: 0000-0001-6118-0541
- first_name: David
full_name: Field, David
id: 419049E2-F248-11E8-B48F-1D18A9856A87
last_name: Field
orcid: 0000-0002-4014-8478
- first_name: Spencer
full_name: Barrett, Spencer
last_name: Barrett
citation:
ama: Teitel Z, Pickup M, Field D, Barrett S. The dynamics of resource allocation
and costs of reproduction in a sexually dimorphic, wind-pollinated dioecious plant.
Plant Biology. 2016;18(1):98-103. doi:10.1111/plb.12336
apa: Teitel, Z., Pickup, M., Field, D., & Barrett, S. (2016). The dynamics of
resource allocation and costs of reproduction in a sexually dimorphic, wind-pollinated
dioecious plant. Plant Biology. Wiley-Blackwell. https://doi.org/10.1111/plb.12336
chicago: Teitel, Zachary, Melinda Pickup, David Field, and Spencer Barrett. “The
Dynamics of Resource Allocation and Costs of Reproduction in a Sexually Dimorphic,
Wind-Pollinated Dioecious Plant.” Plant Biology. Wiley-Blackwell, 2016.
https://doi.org/10.1111/plb.12336.
ieee: Z. Teitel, M. Pickup, D. Field, and S. Barrett, “The dynamics of resource
allocation and costs of reproduction in a sexually dimorphic, wind-pollinated
dioecious plant,” Plant Biology, vol. 18, no. 1. Wiley-Blackwell, pp. 98–103,
2016.
ista: Teitel Z, Pickup M, Field D, Barrett S. 2016. The dynamics of resource allocation
and costs of reproduction in a sexually dimorphic, wind-pollinated dioecious plant.
Plant Biology. 18(1), 98–103.
mla: Teitel, Zachary, et al. “The Dynamics of Resource Allocation and Costs of Reproduction
in a Sexually Dimorphic, Wind-Pollinated Dioecious Plant.” Plant Biology,
vol. 18, no. 1, Wiley-Blackwell, 2016, pp. 98–103, doi:10.1111/plb.12336.
short: Z. Teitel, M. Pickup, D. Field, S. Barrett, Plant Biology 18 (2016) 98–103.
date_created: 2018-12-11T11:50:48Z
date_published: 2016-01-01T00:00:00Z
date_updated: 2025-09-22T09:31:49Z
day: '01'
department:
- _id: NiBa
doi: 10.1111/plb.12336
external_id:
isi:
- '000369975700011'
intvolume: ' 18'
isi: 1
issue: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 98 - 103
publication: Plant Biology
publication_status: published
publisher: Wiley-Blackwell
publist_id: '6110'
quality_controlled: '1'
scopus_import: '1'
status: public
title: The dynamics of resource allocation and costs of reproduction in a sexually
dimorphic, wind-pollinated dioecious plant
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 18
year: '2016'
...
---
_id: '1225'
abstract:
- lang: eng
text: At Crypto 2015 Fuchsbauer, Hanser and Slamanig (FHS) presented the first standard-model
construction of efficient roundoptimal blind signatures that does not require
complexity leveraging. It is conceptually simple and builds on the primitive of
structure-preserving signatures on equivalence classes (SPS-EQ). FHS prove the
unforgeability of their scheme assuming EUF-CMA security of the SPS-EQ scheme
and hardness of a version of the DH inversion problem. Blindness under adversarially
chosen keys is proven under an interactive variant of the DDH assumption. We propose
a variant of their scheme whose blindness can be proven under a non-interactive
assumption, namely a variant of the bilinear DDH assumption. We moreover prove
its unforgeability assuming only unforgeability of the underlying SPS-EQ but no
additional assumptions as needed for the FHS scheme.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Georg
full_name: Fuchsbauer, Georg
id: 46B4C3EE-F248-11E8-B48F-1D18A9856A87
last_name: Fuchsbauer
- first_name: Christian
full_name: Hanser, Christian
last_name: Hanser
- first_name: Chethan
full_name: Kamath Hosdurg, Chethan
id: 4BD3F30E-F248-11E8-B48F-1D18A9856A87
last_name: Kamath Hosdurg
- first_name: Daniel
full_name: Slamanig, Daniel
last_name: Slamanig
citation:
ama: 'Fuchsbauer G, Hanser C, Kamath Hosdurg C, Slamanig D. Practical round-optimal
blind signatures in the standard model from weaker assumptions. In: Vol 9841.
Springer; 2016:391-408. doi:10.1007/978-3-319-44618-9_21'
apa: 'Fuchsbauer, G., Hanser, C., Kamath Hosdurg, C., & Slamanig, D. (2016).
Practical round-optimal blind signatures in the standard model from weaker assumptions
(Vol. 9841, pp. 391–408). Presented at the SCN: Security and Cryptography for
Networks, Amalfi, Italy: Springer. https://doi.org/10.1007/978-3-319-44618-9_21'
chicago: Fuchsbauer, Georg, Christian Hanser, Chethan Kamath Hosdurg, and Daniel
Slamanig. “Practical Round-Optimal Blind Signatures in the Standard Model from
Weaker Assumptions,” 9841:391–408. Springer, 2016. https://doi.org/10.1007/978-3-319-44618-9_21.
ieee: 'G. Fuchsbauer, C. Hanser, C. Kamath Hosdurg, and D. Slamanig, “Practical
round-optimal blind signatures in the standard model from weaker assumptions,”
presented at the SCN: Security and Cryptography for Networks, Amalfi, Italy, 2016,
vol. 9841, pp. 391–408.'
ista: 'Fuchsbauer G, Hanser C, Kamath Hosdurg C, Slamanig D. 2016. Practical round-optimal
blind signatures in the standard model from weaker assumptions. SCN: Security
and Cryptography for Networks, LNCS, vol. 9841, 391–408.'
mla: Fuchsbauer, Georg, et al. Practical Round-Optimal Blind Signatures in the
Standard Model from Weaker Assumptions. Vol. 9841, Springer, 2016, pp. 391–408,
doi:10.1007/978-3-319-44618-9_21.
short: G. Fuchsbauer, C. Hanser, C. Kamath Hosdurg, D. Slamanig, in:, Springer,
2016, pp. 391–408.
conference:
end_date: 2016-09-02
location: Amalfi, Italy
name: 'SCN: Security and Cryptography for Networks'
start_date: 2016-08-31
date_created: 2018-12-11T11:50:49Z
date_published: 2016-08-11T00:00:00Z
date_updated: 2025-09-23T09:53:45Z
day: '11'
department:
- _id: KrPi
doi: 10.1007/978-3-319-44618-9_21
ec_funded: 1
external_id:
isi:
- '000389516500021'
intvolume: ' 9841'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://eprint.iacr.org/2016/662
month: '08'
oa: 1
oa_version: Submitted Version
page: 391 - 408
project:
- _id: 258C570E-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '259668'
name: Provable Security for Physical Cryptography
- _id: 258AA5B2-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '682815'
name: Teaching Old Crypto New Tricks
publication_status: published
publisher: Springer
publist_id: '6109'
quality_controlled: '1'
related_material:
record:
- id: '1647'
relation: earlier_version
status: public
scopus_import: '1'
status: public
title: Practical round-optimal blind signatures in the standard model from weaker
assumptions
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 9841
year: '2016'
...
---
_id: '1226'
abstract:
- lang: eng
text: Mitochondrial complex I (also known as NADH:ubiquinone oxidoreductase) contributes
to cellular energy production by transferring electrons from NADH to ubiquinone
coupled to proton translocation across the membrane. It is the largest protein
assembly of the respiratory chain with a total mass of 970 kilodaltons. Here we
present a nearly complete atomic structure of ovine (Ovis aries) mitochondrial
complex I at 3.9 Å resolution, solved by cryo-electron microscopy with cross-linking
and mass-spectrometry mapping experiments. All 14 conserved core subunits and
31 mitochondria-specific supernumerary subunits are resolved within the L-shaped
molecule. The hydrophilic matrix arm comprises flavin mononucleotide and 8 iron-sulfur
clusters involved in electron transfer, and the membrane arm contains 78 transmembrane
helices, mostly contributed by antiporter-like subunits involved in proton translocation.
Supernumerary subunits form an interlinked, stabilizing shell around the conserved
core. Tightly bound lipids (including cardiolipins) further stabilize interactions
between the hydrophobic subunits. Subunits with possible regulatory roles contain
additional cofactors, NADPH and two phosphopantetheine molecules, which are shown
to be involved in inter-subunit interactions. We observe two different conformations
of the complex, which may be related to the conformationally driven coupling mechanism
and to the active-deactive transition of the enzyme. Our structure provides insight
into the mechanism, assembly, maturation and dysfunction of mitochondrial complex
I, and allows detailed molecular analysis of disease-causing mutations.
article_processing_charge: No
article_type: original
author:
- first_name: Karol
full_name: Fiedorczuk, Karol
id: 5BFF67CE-02D1-11E9-B11A-A5A4D7DFFFD0
last_name: Fiedorczuk
- first_name: James A
full_name: Letts, James A
id: 322DA418-F248-11E8-B48F-1D18A9856A87
last_name: Letts
orcid: 0000-0002-9864-3586
- first_name: Gianluca
full_name: Degliesposti, Gianluca
last_name: Degliesposti
- first_name: Karol
full_name: Kaszuba, Karol
id: 3FDF9472-F248-11E8-B48F-1D18A9856A87
last_name: Kaszuba
- first_name: Mark
full_name: Skehel, Mark
last_name: Skehel
- first_name: Leonid A
full_name: Sazanov, Leonid A
id: 338D39FE-F248-11E8-B48F-1D18A9856A87
last_name: Sazanov
orcid: 0000-0002-0977-7989
citation:
ama: Fiedorczuk K, Letts JA, Degliesposti G, Kaszuba K, Skehel M, Sazanov LA. Atomic
structure of the entire mammalian mitochondrial complex i. Nature. 2016;538(7625):406-410.
doi:10.1038/nature19794
apa: Fiedorczuk, K., Letts, J. A., Degliesposti, G., Kaszuba, K., Skehel, M., &
Sazanov, L. A. (2016). Atomic structure of the entire mammalian mitochondrial
complex i. Nature. Nature Publishing Group. https://doi.org/10.1038/nature19794
chicago: Fiedorczuk, Karol, James A Letts, Gianluca Degliesposti, Karol Kaszuba,
Mark Skehel, and Leonid A Sazanov. “Atomic Structure of the Entire Mammalian Mitochondrial
Complex I.” Nature. Nature Publishing Group, 2016. https://doi.org/10.1038/nature19794.
ieee: K. Fiedorczuk, J. A. Letts, G. Degliesposti, K. Kaszuba, M. Skehel, and L.
A. Sazanov, “Atomic structure of the entire mammalian mitochondrial complex i,”
Nature, vol. 538, no. 7625. Nature Publishing Group, pp. 406–410, 2016.
ista: Fiedorczuk K, Letts JA, Degliesposti G, Kaszuba K, Skehel M, Sazanov LA. 2016.
Atomic structure of the entire mammalian mitochondrial complex i. Nature. 538(7625),
406–410.
mla: Fiedorczuk, Karol, et al. “Atomic Structure of the Entire Mammalian Mitochondrial
Complex I.” Nature, vol. 538, no. 7625, Nature Publishing Group, 2016,
pp. 406–10, doi:10.1038/nature19794.
short: K. Fiedorczuk, J.A. Letts, G. Degliesposti, K. Kaszuba, M. Skehel, L.A. Sazanov,
Nature 538 (2016) 406–410.
date_created: 2018-12-11T11:50:49Z
date_published: 2016-10-20T00:00:00Z
date_updated: 2025-09-22T09:29:26Z
day: '20'
department:
- _id: LeSa
doi: 10.1038/nature19794
ec_funded: 1
external_id:
isi:
- '000386673100044'
pmid:
- '27595392'
intvolume: ' 538'
isi: 1
issue: '7625'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5164932/
month: '10'
oa: 1
oa_version: Submitted Version
page: 406 - 410
pmid: 1
project:
- _id: 2593EBD6-B435-11E9-9278-68D0E5697425
name: Atomic-Resolution Structures of Mitochondrial Respiratory Chain Supercomplexes
- _id: 2590DB08-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '701309'
name: Atomic Resolution Structures of Mitochondrial Respiratory Chain Supercomplexes
publication: Nature
publication_status: published
publisher: Nature Publishing Group
publist_id: '6108'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Atomic structure of the entire mammalian mitochondrial complex i
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 538
year: '2016'
...
---
_id: '262'
abstract:
- lang: eng
text: For any number field we calculate the exact proportion of rational numbers
which are everywhere locally a norm but not globally a norm from the number field.
acknowledgement: While working on this paper the first author was supported by ERC
grant 306457.
author:
- first_name: Timothy D
full_name: Timothy Browning
id: 35827D50-F248-11E8-B48F-1D18A9856A87
last_name: Browning
orcid: 0000-0002-8314-0177
- first_name: Rachel
full_name: Newton, Rachel
last_name: Newton
citation:
ama: Browning TD, Newton R. The proportion of failures of the Hasse norm principle.
Mathematika. 2016;62(2):337-347. doi:10.1112/S0025579315000261
apa: Browning, T. D., & Newton, R. (2016). The proportion of failures of the
Hasse norm principle. Mathematika. Cambridge University Press. https://doi.org/10.1112/S0025579315000261
chicago: Browning, Timothy D, and Rachel Newton. “The Proportion of Failures of
the Hasse Norm Principle.” Mathematika. Cambridge University Press, 2016.
https://doi.org/10.1112/S0025579315000261.
ieee: T. D. Browning and R. Newton, “The proportion of failures of the Hasse norm
principle,” Mathematika, vol. 62, no. 2. Cambridge University Press, pp.
337–347, 2016.
ista: Browning TD, Newton R. 2016. The proportion of failures of the Hasse norm
principle. Mathematika. 62(2), 337–347.
mla: Browning, Timothy D., and Rachel Newton. “The Proportion of Failures of the
Hasse Norm Principle.” Mathematika, vol. 62, no. 2, Cambridge University
Press, 2016, pp. 337–47, doi:10.1112/S0025579315000261.
short: T.D. Browning, R. Newton, Mathematika 62 (2016) 337–347.
date_created: 2018-12-11T11:45:29Z
date_published: 2016-01-22T00:00:00Z
date_updated: 2021-01-12T06:58:37Z
day: '22'
doi: 10.1112/S0025579315000261
extern: 1
intvolume: ' 62'
issue: '2'
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1411.7775
month: '01'
oa: 1
page: 337 - 347
publication: Mathematika
publication_status: published
publisher: Cambridge University Press
publist_id: '7640'
quality_controlled: 0
status: public
title: The proportion of failures of the Hasse norm principle
type: journal_article
volume: 62
year: '2016'
...
---
_id: '263'
abstract:
- lang: eng
text: We count rational points of bounded height on the Cayley ruled cubic surface
and interpret the result in the context of general conjectures due to Batyrev
and Tschinkel.
acknowledgement: 'While working on this paper the first author was supported by an
IUF Junior and the second author was supported by ERC grant 306457. '
author:
- first_name: Régis
full_name: de la Bretèche, Régis
last_name: De La Bretèche
- first_name: Timothy D
full_name: Timothy Browning
id: 35827D50-F248-11E8-B48F-1D18A9856A87
last_name: Browning
orcid: 0000-0002-8314-0177
- first_name: Per
full_name: Salberger, Per
last_name: Salberger
citation:
ama: De La Bretèche R, Browning TD, Salberger P. Counting rational points on the
Cayley ruled cubic. European Journal of Mathematics. 2016;2(1):55-72. doi:10.1007/s40879-015-0049-1
apa: De La Bretèche, R., Browning, T. D., & Salberger, P. (2016). Counting rational
points on the Cayley ruled cubic. European Journal of Mathematics. Springer
Nature. https://doi.org/10.1007/s40879-015-0049-1
chicago: De La Bretèche, Régis, Timothy D Browning, and Per Salberger. “Counting
Rational Points on the Cayley Ruled Cubic.” European Journal of Mathematics.
Springer Nature, 2016. https://doi.org/10.1007/s40879-015-0049-1.
ieee: R. De La Bretèche, T. D. Browning, and P. Salberger, “Counting rational points
on the Cayley ruled cubic,” European Journal of Mathematics, vol. 2, no.
1. Springer Nature, pp. 55–72, 2016.
ista: De La Bretèche R, Browning TD, Salberger P. 2016. Counting rational points
on the Cayley ruled cubic. European Journal of Mathematics. 2(1), 55–72.
mla: De La Bretèche, Régis, et al. “Counting Rational Points on the Cayley Ruled
Cubic.” European Journal of Mathematics, vol. 2, no. 1, Springer Nature,
2016, pp. 55–72, doi:10.1007/s40879-015-0049-1.
short: R. De La Bretèche, T.D. Browning, P. Salberger, European Journal of Mathematics
2 (2016) 55–72.
date_created: 2018-12-11T11:45:30Z
date_published: 2016-03-01T00:00:00Z
date_updated: 2021-01-12T06:58:41Z
day: '01'
doi: 10.1007/s40879-015-0049-1
extern: 1
intvolume: ' 2'
issue: '1'
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1410.3855
month: '03'
oa: 1
page: 55 - 72
publication: European Journal of Mathematics
publication_status: published
publisher: Springer Nature
publist_id: '7639'
quality_controlled: 0
status: public
title: Counting rational points on the Cayley ruled cubic
type: journal_article
volume: 2
year: '2016'
...
---
_id: '264'
abstract:
- lang: eng
text: Given a family of varieties over a number field, we determine conditions under
which there is a Brauer-Manin obstruction to weak approximation for 100% of the
fibres which are everywhere locally soluble.
acknowledgement: While working on this paper the second author was supported by ERC
grant 306457.
author:
- first_name: Maritn
full_name: Bright, Maritn J
last_name: Bright
- first_name: Timothy D
full_name: Timothy Browning
id: 35827D50-F248-11E8-B48F-1D18A9856A87
last_name: Browning
orcid: 0000-0002-8314-0177
- first_name: Daniel
full_name: Loughran, Daniel
last_name: Loughran
citation:
ama: Bright M, Browning TD, Loughran D. Failures of weak approximation in families.
Compositio Mathematica. 2016;152(7):1435-1475. doi:10.1112/S0010437X16007405
apa: Bright, M., Browning, T. D., & Loughran, D. (2016). Failures of weak approximation
in families. Compositio Mathematica. Cambridge University Press. https://doi.org/10.1112/S0010437X16007405
chicago: Bright, Maritn, Timothy D Browning, and Daniel Loughran. “Failures of Weak
Approximation in Families.” Compositio Mathematica. Cambridge University
Press, 2016. https://doi.org/10.1112/S0010437X16007405.
ieee: M. Bright, T. D. Browning, and D. Loughran, “Failures of weak approximation
in families,” Compositio Mathematica, vol. 152, no. 7. Cambridge University
Press, pp. 1435–1475, 2016.
ista: Bright M, Browning TD, Loughran D. 2016. Failures of weak approximation in
families. Compositio Mathematica. 152(7), 1435–1475.
mla: Bright, Maritn, et al. “Failures of Weak Approximation in Families.” Compositio
Mathematica, vol. 152, no. 7, Cambridge University Press, 2016, pp. 1435–75,
doi:10.1112/S0010437X16007405.
short: M. Bright, T.D. Browning, D. Loughran, Compositio Mathematica 152 (2016)
1435–1475.
date_created: 2018-12-11T11:45:30Z
date_published: 2016-07-01T00:00:00Z
date_updated: 2021-01-12T06:58:45Z
day: '01'
doi: 10.1112/S0010437X16007405
extern: 1
intvolume: ' 152'
issue: '7'
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1506.01817
month: '07'
oa: 1
page: 1435 - 1475
publication: Compositio Mathematica
publication_status: published
publisher: Cambridge University Press
publist_id: '7638'
quality_controlled: 0
status: public
title: Failures of weak approximation in families
type: journal_article
volume: 152
year: '2016'
...
---
_id: '13385'
abstract:
- lang: eng
text: Novel light-responsive nanoparticles were synthesized by decorating the surfaces
of gold and silver nanoparticles with a nitrospiropyran molecular photoswitch.
Upon exposure to UV light in nonpolar solvents, these nanoparticles self-assembled
to afford spherical aggregates, which disassembled rapidly when the UV stimulus
was turned off. The sizes of these aggregates depended on the nanoparticle concentration,
and their lifetimes could be controlled by adjusting the surface concentration
of nitrospiropyran on the nanoparticles. The conformational flexibility of nitrospiropyran,
which was altered by modifying the structure of the background ligand, had a profound
impact on the self-assembly process. By coating the nanoparticles with a spiropyran
lacking the nitro group, a conceptually different self-assembly system, relying
on a reversible proton transfer, was realized. The resulting particles spontaneously
(in the dark) assembled into aggregates that could be readily disassembled upon
exposure to blue light.
article_processing_charge: No
article_type: original
author:
- first_name: Pintu K.
full_name: Kundu, Pintu K.
last_name: Kundu
- first_name: Sanjib
full_name: Das, Sanjib
last_name: Das
- first_name: Johannes
full_name: Ahrens, Johannes
last_name: Ahrens
- first_name: Rafal
full_name: Klajn, Rafal
id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
last_name: Klajn
citation:
ama: Kundu PK, Das S, Ahrens J, Klajn R. Controlling the lifetimes of dynamic nanoparticle
aggregates by spiropyran functionalization. Nanoscale. 2016;8(46):19280-19286.
doi:10.1039/c6nr05959g
apa: Kundu, P. K., Das, S., Ahrens, J., & Klajn, R. (2016). Controlling the
lifetimes of dynamic nanoparticle aggregates by spiropyran functionalization.
Nanoscale. Royal Society of Chemistry. https://doi.org/10.1039/c6nr05959g
chicago: Kundu, Pintu K., Sanjib Das, Johannes Ahrens, and Rafal Klajn. “Controlling
the Lifetimes of Dynamic Nanoparticle Aggregates by Spiropyran Functionalization.”
Nanoscale. Royal Society of Chemistry, 2016. https://doi.org/10.1039/c6nr05959g.
ieee: P. K. Kundu, S. Das, J. Ahrens, and R. Klajn, “Controlling the lifetimes of
dynamic nanoparticle aggregates by spiropyran functionalization,” Nanoscale,
vol. 8, no. 46. Royal Society of Chemistry, pp. 19280–19286, 2016.
ista: Kundu PK, Das S, Ahrens J, Klajn R. 2016. Controlling the lifetimes of dynamic
nanoparticle aggregates by spiropyran functionalization. Nanoscale. 8(46), 19280–19286.
mla: Kundu, Pintu K., et al. “Controlling the Lifetimes of Dynamic Nanoparticle
Aggregates by Spiropyran Functionalization.” Nanoscale, vol. 8, no. 46,
Royal Society of Chemistry, 2016, pp. 19280–86, doi:10.1039/c6nr05959g.
short: P.K. Kundu, S. Das, J. Ahrens, R. Klajn, Nanoscale 8 (2016) 19280–19286.
date_created: 2023-08-01T09:42:22Z
date_published: 2016-10-19T00:00:00Z
date_updated: 2024-10-14T12:16:21Z
day: '19'
doi: 10.1039/c6nr05959g
extern: '1'
external_id:
pmid:
- '27830865'
intvolume: ' 8'
issue: '46'
keyword:
- General Materials Science
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1039/C6NR05959G
month: '10'
oa: 1
oa_version: Published Version
page: 19280-19286
pmid: 1
publication: Nanoscale
publication_identifier:
eissn:
- 2040-3372
issn:
- 2040-3364
publication_status: published
publisher: Royal Society of Chemistry
quality_controlled: '1'
scopus_import: '1'
status: public
title: Controlling the lifetimes of dynamic nanoparticle aggregates by spiropyran
functionalization
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2016'
...
---
_id: '13386'
abstract:
- lang: eng
text: Azobenzenealkanethiols in self-assembled monolayers (SAMs) on Au(111) exhibit
reversible trans–cis photoisomerization when diluted with alkanethiol spacers.
Using these mixed SAMs, we show switching of the linear optical and second-harmonic
response. The effective switching of these surface optical properties relies on
a reasonably large cross section and a high photoisomerization yield as well as
a long lifetime of the metastable cis isomer. We quantified the switching process
by X-ray absorption spectroscopy. The cross sections for the trans–cis and cis–trans
photoisomerization with 365 and 455 nm light, respectively, are 1 order of magnitude
smaller than in solution. In vacuum, the 365 nm photostationary state comprises
50–74% of the molecules in the cis form, limited by their rapid thermal isomerization
back to the trans state. In contrast, the 455 nm photostationary state contains
nearly 100% trans-azobenzene. We determined time constants for the thermal cis–trans
isomerization of only a few minutes in vacuum and in a dry nitrogen atmosphere
but of more than 1 day in ambient air. Our results suggest that adventitious water
adsorbed on the surface of the SAM stabilizes the polar cis configuration of azobenzene
under ambient conditions. The back reaction rate constants differing by 2 orders
of magnitude underline the huge influence of the environment and, accordingly,
its importance when comparing various experiments.
article_processing_charge: No
article_type: original
author:
- first_name: Thomas
full_name: Moldt, Thomas
last_name: Moldt
- first_name: Daniel
full_name: Przyrembel, Daniel
last_name: Przyrembel
- first_name: Michael
full_name: Schulze, Michael
last_name: Schulze
- first_name: Wibke
full_name: Bronsch, Wibke
last_name: Bronsch
- first_name: Larissa
full_name: Boie, Larissa
last_name: Boie
- first_name: Daniel
full_name: Brete, Daniel
last_name: Brete
- first_name: Cornelius
full_name: Gahl, Cornelius
last_name: Gahl
- first_name: Rafal
full_name: Klajn, Rafal
id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
last_name: Klajn
- first_name: Petra
full_name: Tegeder, Petra
last_name: Tegeder
- first_name: Martin
full_name: Weinelt, Martin
last_name: Weinelt
citation:
ama: Moldt T, Przyrembel D, Schulze M, et al. Differing isomerization kinetics of
azobenzene-functionalized self-assembled monolayers in ambient air and in vacuum.
Langmuir. 2016;32(42):10795-10801. doi:10.1021/acs.langmuir.6b01690
apa: Moldt, T., Przyrembel, D., Schulze, M., Bronsch, W., Boie, L., Brete, D., …
Weinelt, M. (2016). Differing isomerization kinetics of azobenzene-functionalized
self-assembled monolayers in ambient air and in vacuum. Langmuir. American
Chemical Society. https://doi.org/10.1021/acs.langmuir.6b01690
chicago: Moldt, Thomas, Daniel Przyrembel, Michael Schulze, Wibke Bronsch, Larissa
Boie, Daniel Brete, Cornelius Gahl, Rafal Klajn, Petra Tegeder, and Martin Weinelt.
“Differing Isomerization Kinetics of Azobenzene-Functionalized Self-Assembled
Monolayers in Ambient Air and in Vacuum.” Langmuir. American Chemical Society,
2016. https://doi.org/10.1021/acs.langmuir.6b01690.
ieee: T. Moldt et al., “Differing isomerization kinetics of azobenzene-functionalized
self-assembled monolayers in ambient air and in vacuum,” Langmuir, vol.
32, no. 42. American Chemical Society, pp. 10795–10801, 2016.
ista: Moldt T, Przyrembel D, Schulze M, Bronsch W, Boie L, Brete D, Gahl C, Klajn
R, Tegeder P, Weinelt M. 2016. Differing isomerization kinetics of azobenzene-functionalized
self-assembled monolayers in ambient air and in vacuum. Langmuir. 32(42), 10795–10801.
mla: Moldt, Thomas, et al. “Differing Isomerization Kinetics of Azobenzene-Functionalized
Self-Assembled Monolayers in Ambient Air and in Vacuum.” Langmuir, vol.
32, no. 42, American Chemical Society, 2016, pp. 10795–801, doi:10.1021/acs.langmuir.6b01690.
short: T. Moldt, D. Przyrembel, M. Schulze, W. Bronsch, L. Boie, D. Brete, C. Gahl,
R. Klajn, P. Tegeder, M. Weinelt, Langmuir 32 (2016) 10795–10801.
date_created: 2023-08-01T09:42:37Z
date_published: 2016-10-25T00:00:00Z
date_updated: 2023-08-07T12:27:06Z
day: '25'
doi: 10.1021/acs.langmuir.6b01690
extern: '1'
external_id:
pmid:
- '27681851'
intvolume: ' 32'
issue: '42'
keyword:
- Electrochemistry
- Spectroscopy
- Surfaces and Interfaces
- Condensed Matter Physics
- General Materials Science
language:
- iso: eng
month: '10'
oa_version: None
page: 10795-10801
pmid: 1
publication: Langmuir
publication_identifier:
eissn:
- 1520-5827
issn:
- 0743-7463
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Differing isomerization kinetics of azobenzene-functionalized self-assembled
monolayers in ambient air and in vacuum
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 32
year: '2016'
...
---
_id: '13387'
abstract:
- lang: eng
text: Come on in, the water's fine! Non-photoresponsive nanoparticles can be reversibly
assembled using light by placing them in an aqueous solution of a photoacid.
Upon exposure to visible light, the photoacid reduces the pH of the solution,
which induces attractive interactions between the nanoparticles. In the dark,
the resulting nanoparticle aggregates spontaneously disassemble. The process can
be repeated many times.
article_processing_charge: No
article_type: original
author:
- first_name: Dipak
full_name: Samanta, Dipak
last_name: Samanta
- first_name: Rafal
full_name: Klajn, Rafal
id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
last_name: Klajn
citation:
ama: Samanta D, Klajn R. Aqueous light-controlled self-assembly of nanoparticles.
Advanced Optical Materials. 2016;4(9):1373-1377. doi:10.1002/adom.201600364
apa: Samanta, D., & Klajn, R. (2016). Aqueous light-controlled self-assembly
of nanoparticles. Advanced Optical Materials. Wiley. https://doi.org/10.1002/adom.201600364
chicago: Samanta, Dipak, and Rafal Klajn. “Aqueous Light-Controlled Self-Assembly
of Nanoparticles.” Advanced Optical Materials. Wiley, 2016. https://doi.org/10.1002/adom.201600364.
ieee: D. Samanta and R. Klajn, “Aqueous light-controlled self-assembly of nanoparticles,”
Advanced Optical Materials, vol. 4, no. 9. Wiley, pp. 1373–1377, 2016.
ista: Samanta D, Klajn R. 2016. Aqueous light-controlled self-assembly of nanoparticles.
Advanced Optical Materials. 4(9), 1373–1377.
mla: Samanta, Dipak, and Rafal Klajn. “Aqueous Light-Controlled Self-Assembly of
Nanoparticles.” Advanced Optical Materials, vol. 4, no. 9, Wiley, 2016,
pp. 1373–77, doi:10.1002/adom.201600364.
short: D. Samanta, R. Klajn, Advanced Optical Materials 4 (2016) 1373–1377.
date_created: 2023-08-01T09:42:49Z
date_published: 2016-09-01T00:00:00Z
date_updated: 2024-10-14T12:16:34Z
day: '01'
doi: 10.1002/adom.201600364
extern: '1'
intvolume: ' 4'
issue: '9'
keyword:
- Atomic and Molecular Physics
- and Optics
- Electronic
- Optical and Magnetic Materials
language:
- iso: eng
month: '09'
oa_version: None
page: 1373-1377
publication: Advanced Optical Materials
publication_identifier:
eissn:
- 2195-1071
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Aqueous light-controlled self-assembly of nanoparticles
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 4
year: '2016'
...