---
_id: '9849'
abstract:
- lang: eng
  text: This text provides additional information about the model, a derivation of
    the analytic results in Eq (4), and details about simulations of an additional
    parameter set.
article_processing_charge: No
author:
- first_name: Marta
  full_name: Lukacisinova, Marta
  id: 4342E402-F248-11E8-B48F-1D18A9856A87
  last_name: Lukacisinova
  orcid: 0000-0002-2519-8004
- first_name: Sebastian
  full_name: Novak, Sebastian
  id: 461468AE-F248-11E8-B48F-1D18A9856A87
  last_name: Novak
  orcid: 0000-0002-2519-824X
- first_name: Tiago
  full_name: Paixao, Tiago
  id: 2C5658E6-F248-11E8-B48F-1D18A9856A87
  last_name: Paixao
  orcid: 0000-0003-2361-3953
citation:
  ama: Lukacisinova M, Novak S, Paixao T. Modelling and simulation details. 2017.
    doi:<a href="https://doi.org/10.1371/journal.pcbi.1005609.s001">10.1371/journal.pcbi.1005609.s001</a>
  apa: Lukacisinova, M., Novak, S., &#38; Paixao, T. (2017). Modelling and simulation
    details. Public Library of Science. <a href="https://doi.org/10.1371/journal.pcbi.1005609.s001">https://doi.org/10.1371/journal.pcbi.1005609.s001</a>
  chicago: Lukacisinova, Marta, Sebastian Novak, and Tiago Paixao. “Modelling and
    Simulation Details.” Public Library of Science, 2017. <a href="https://doi.org/10.1371/journal.pcbi.1005609.s001">https://doi.org/10.1371/journal.pcbi.1005609.s001</a>.
  ieee: M. Lukacisinova, S. Novak, and T. Paixao, “Modelling and simulation details.”
    Public Library of Science, 2017.
  ista: Lukacisinova M, Novak S, Paixao T. 2017. Modelling and simulation details,
    Public Library of Science, <a href="https://doi.org/10.1371/journal.pcbi.1005609.s001">10.1371/journal.pcbi.1005609.s001</a>.
  mla: Lukacisinova, Marta, et al. <i>Modelling and Simulation Details</i>. Public
    Library of Science, 2017, doi:<a href="https://doi.org/10.1371/journal.pcbi.1005609.s001">10.1371/journal.pcbi.1005609.s001</a>.
  short: M. Lukacisinova, S. Novak, T. Paixao, (2017).
date_created: 2021-08-09T14:02:34Z
date_published: 2017-07-18T00:00:00Z
date_updated: 2025-09-10T11:11:52Z
day: '18'
department:
- _id: ToBo
- _id: NiBa
- _id: CaGu
doi: 10.1371/journal.pcbi.1005609.s001
month: '07'
oa_version: Published Version
publisher: Public Library of Science
related_material:
  record:
  - id: '696'
    relation: used_in_publication
    status: public
status: public
title: Modelling and simulation details
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2017'
...
---
_id: '9850'
abstract:
- lang: eng
  text: In this text, we discuss how a cost of resistance and the possibility of lethal
    mutations impact our model.
article_processing_charge: No
author:
- first_name: Marta
  full_name: Lukacisinova, Marta
  id: 4342E402-F248-11E8-B48F-1D18A9856A87
  last_name: Lukacisinova
  orcid: 0000-0002-2519-8004
- first_name: Sebastian
  full_name: Novak, Sebastian
  id: 461468AE-F248-11E8-B48F-1D18A9856A87
  last_name: Novak
  orcid: 0000-0002-2519-824X
- first_name: Tiago
  full_name: Paixao, Tiago
  id: 2C5658E6-F248-11E8-B48F-1D18A9856A87
  last_name: Paixao
  orcid: 0000-0003-2361-3953
citation:
  ama: Lukacisinova M, Novak S, Paixao T. Extensions of the model. 2017. doi:<a href="https://doi.org/10.1371/journal.pcbi.1005609.s002">10.1371/journal.pcbi.1005609.s002</a>
  apa: Lukacisinova, M., Novak, S., &#38; Paixao, T. (2017). Extensions of the model.
    Public Library of Science. <a href="https://doi.org/10.1371/journal.pcbi.1005609.s002">https://doi.org/10.1371/journal.pcbi.1005609.s002</a>
  chicago: Lukacisinova, Marta, Sebastian Novak, and Tiago Paixao. “Extensions of
    the Model.” Public Library of Science, 2017. <a href="https://doi.org/10.1371/journal.pcbi.1005609.s002">https://doi.org/10.1371/journal.pcbi.1005609.s002</a>.
  ieee: M. Lukacisinova, S. Novak, and T. Paixao, “Extensions of the model.” Public
    Library of Science, 2017.
  ista: Lukacisinova M, Novak S, Paixao T. 2017. Extensions of the model, Public Library
    of Science, <a href="https://doi.org/10.1371/journal.pcbi.1005609.s002">10.1371/journal.pcbi.1005609.s002</a>.
  mla: Lukacisinova, Marta, et al. <i>Extensions of the Model</i>. Public Library
    of Science, 2017, doi:<a href="https://doi.org/10.1371/journal.pcbi.1005609.s002">10.1371/journal.pcbi.1005609.s002</a>.
  short: M. Lukacisinova, S. Novak, T. Paixao, (2017).
date_created: 2021-08-09T14:05:24Z
date_published: 2017-07-18T00:00:00Z
date_updated: 2025-09-10T11:11:52Z
day: '18'
department:
- _id: ToBo
- _id: CaGu
- _id: NiBa
doi: 10.1371/journal.pcbi.1005609.s002
month: '07'
oa_version: Published Version
publisher: Public Library of Science
related_material:
  record:
  - id: '696'
    relation: used_in_publication
    status: public
status: public
title: Extensions of the model
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2017'
...
---
_id: '9851'
abstract:
- lang: eng
  text: Based on the intuitive derivation of the dynamics of SIM allele frequency
    pM in the main text, we present a heuristic prediction for the long-term SIM allele
    frequencies with χ > 1 stresses and compare it to numerical simulations.
article_processing_charge: No
author:
- first_name: Marta
  full_name: Lukacisinova, Marta
  id: 4342E402-F248-11E8-B48F-1D18A9856A87
  last_name: Lukacisinova
  orcid: 0000-0002-2519-8004
- first_name: Sebastian
  full_name: Novak, Sebastian
  id: 461468AE-F248-11E8-B48F-1D18A9856A87
  last_name: Novak
  orcid: 0000-0002-2519-824X
- first_name: Tiago
  full_name: Paixao, Tiago
  id: 2C5658E6-F248-11E8-B48F-1D18A9856A87
  last_name: Paixao
  orcid: 0000-0003-2361-3953
citation:
  ama: Lukacisinova M, Novak S, Paixao T. Heuristic prediction for multiple stresses.
    2017. doi:<a href="https://doi.org/10.1371/journal.pcbi.1005609.s003">10.1371/journal.pcbi.1005609.s003</a>
  apa: Lukacisinova, M., Novak, S., &#38; Paixao, T. (2017). Heuristic prediction
    for multiple stresses. Public Library of Science. <a href="https://doi.org/10.1371/journal.pcbi.1005609.s003">https://doi.org/10.1371/journal.pcbi.1005609.s003</a>
  chicago: Lukacisinova, Marta, Sebastian Novak, and Tiago Paixao. “Heuristic Prediction
    for Multiple Stresses.” Public Library of Science, 2017. <a href="https://doi.org/10.1371/journal.pcbi.1005609.s003">https://doi.org/10.1371/journal.pcbi.1005609.s003</a>.
  ieee: M. Lukacisinova, S. Novak, and T. Paixao, “Heuristic prediction for multiple
    stresses.” Public Library of Science, 2017.
  ista: Lukacisinova M, Novak S, Paixao T. 2017. Heuristic prediction for multiple
    stresses, Public Library of Science, <a href="https://doi.org/10.1371/journal.pcbi.1005609.s003">10.1371/journal.pcbi.1005609.s003</a>.
  mla: Lukacisinova, Marta, et al. <i>Heuristic Prediction for Multiple Stresses</i>.
    Public Library of Science, 2017, doi:<a href="https://doi.org/10.1371/journal.pcbi.1005609.s003">10.1371/journal.pcbi.1005609.s003</a>.
  short: M. Lukacisinova, S. Novak, T. Paixao, (2017).
date_created: 2021-08-09T14:08:14Z
date_published: 2017-07-18T00:00:00Z
date_updated: 2025-09-10T11:11:52Z
day: '18'
department:
- _id: ToBo
- _id: CaGu
- _id: NiBa
doi: 10.1371/journal.pcbi.1005609.s003
month: '07'
oa_version: Published Version
publisher: Public Library of Science
related_material:
  record:
  - id: '696'
    relation: used_in_publication
    status: public
status: public
title: Heuristic prediction for multiple stresses
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2017'
...
---
_id: '9852'
abstract:
- lang: eng
  text: We show how different combination strategies affect the fraction of individuals
    that are multi-resistant.
article_processing_charge: No
author:
- first_name: Marta
  full_name: Lukacisinova, Marta
  id: 4342E402-F248-11E8-B48F-1D18A9856A87
  last_name: Lukacisinova
  orcid: 0000-0002-2519-8004
- first_name: Sebastian
  full_name: Novak, Sebastian
  id: 461468AE-F248-11E8-B48F-1D18A9856A87
  last_name: Novak
  orcid: 0000-0002-2519-824X
- first_name: Tiago
  full_name: Paixao, Tiago
  id: 2C5658E6-F248-11E8-B48F-1D18A9856A87
  last_name: Paixao
  orcid: 0000-0003-2361-3953
citation:
  ama: Lukacisinova M, Novak S, Paixao T. Resistance frequencies for different combination
    strategies. 2017. doi:<a href="https://doi.org/10.1371/journal.pcbi.1005609.s004">10.1371/journal.pcbi.1005609.s004</a>
  apa: Lukacisinova, M., Novak, S., &#38; Paixao, T. (2017). Resistance frequencies
    for different combination strategies. Public Library of Science. <a href="https://doi.org/10.1371/journal.pcbi.1005609.s004">https://doi.org/10.1371/journal.pcbi.1005609.s004</a>
  chicago: Lukacisinova, Marta, Sebastian Novak, and Tiago Paixao. “Resistance Frequencies
    for Different Combination Strategies.” Public Library of Science, 2017. <a href="https://doi.org/10.1371/journal.pcbi.1005609.s004">https://doi.org/10.1371/journal.pcbi.1005609.s004</a>.
  ieee: M. Lukacisinova, S. Novak, and T. Paixao, “Resistance frequencies for different
    combination strategies.” Public Library of Science, 2017.
  ista: Lukacisinova M, Novak S, Paixao T. 2017. Resistance frequencies for different
    combination strategies, Public Library of Science, <a href="https://doi.org/10.1371/journal.pcbi.1005609.s004">10.1371/journal.pcbi.1005609.s004</a>.
  mla: Lukacisinova, Marta, et al. <i>Resistance Frequencies for Different Combination
    Strategies</i>. Public Library of Science, 2017, doi:<a href="https://doi.org/10.1371/journal.pcbi.1005609.s004">10.1371/journal.pcbi.1005609.s004</a>.
  short: M. Lukacisinova, S. Novak, T. Paixao, (2017).
date_created: 2021-08-09T14:11:40Z
date_published: 2017-07-18T00:00:00Z
date_updated: 2025-09-10T11:11:52Z
day: '18'
department:
- _id: ToBo
- _id: CaGu
- _id: NiBa
doi: 10.1371/journal.pcbi.1005609.s004
month: '07'
oa_version: Published Version
publisher: Public Library of Science
related_material:
  record:
  - id: '696'
    relation: used_in_publication
    status: public
status: public
title: Resistance frequencies for different combination strategies
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2017'
...
---
_id: '9853'
abstract:
- lang: eng
  text: Egg laying rates and infection loads of C. obscurior queens
article_processing_charge: No
author:
- first_name: Julia
  full_name: Giehr, Julia
  last_name: Giehr
- first_name: Anna V
  full_name: Grasse, Anna V
  id: 406F989C-F248-11E8-B48F-1D18A9856A87
  last_name: Grasse
- first_name: Sylvia
  full_name: Cremer, Sylvia
  id: 2F64EC8C-F248-11E8-B48F-1D18A9856A87
  last_name: Cremer
  orcid: 0000-0002-2193-3868
- first_name: Jürgen
  full_name: Heinze, Jürgen
  last_name: Heinze
- first_name: Alexandra
  full_name: Schrempf, Alexandra
  last_name: Schrempf
citation:
  ama: Giehr J, Grasse AV, Cremer S, Heinze J, Schrempf A. Raw data from ant queens
    increase their reproductive efforts after pathogen infection. 2017. doi:<a href="https://doi.org/10.6084/m9.figshare.5117788.v1">10.6084/m9.figshare.5117788.v1</a>
  apa: Giehr, J., Grasse, A. V., Cremer, S., Heinze, J., &#38; Schrempf, A. (2017).
    Raw data from ant queens increase their reproductive efforts after pathogen infection.
    The Royal Society. <a href="https://doi.org/10.6084/m9.figshare.5117788.v1">https://doi.org/10.6084/m9.figshare.5117788.v1</a>
  chicago: Giehr, Julia, Anna V Grasse, Sylvia Cremer, Jürgen Heinze, and Alexandra
    Schrempf. “Raw Data from Ant Queens Increase Their Reproductive Efforts after
    Pathogen Infection.” The Royal Society, 2017. <a href="https://doi.org/10.6084/m9.figshare.5117788.v1">https://doi.org/10.6084/m9.figshare.5117788.v1</a>.
  ieee: J. Giehr, A. V. Grasse, S. Cremer, J. Heinze, and A. Schrempf, “Raw data from
    ant queens increase their reproductive efforts after pathogen infection.” The
    Royal Society, 2017.
  ista: Giehr J, Grasse AV, Cremer S, Heinze J, Schrempf A. 2017. Raw data from ant
    queens increase their reproductive efforts after pathogen infection, The Royal
    Society, <a href="https://doi.org/10.6084/m9.figshare.5117788.v1">10.6084/m9.figshare.5117788.v1</a>.
  mla: Giehr, Julia, et al. <i>Raw Data from Ant Queens Increase Their Reproductive
    Efforts after Pathogen Infection</i>. The Royal Society, 2017, doi:<a href="https://doi.org/10.6084/m9.figshare.5117788.v1">10.6084/m9.figshare.5117788.v1</a>.
  short: J. Giehr, A.V. Grasse, S. Cremer, J. Heinze, A. Schrempf, (2017).
date_created: 2021-08-10T06:57:57Z
date_published: 2017-06-19T00:00:00Z
date_updated: 2025-07-10T12:01:39Z
day: '19'
department:
- _id: SyCr
doi: 10.6084/m9.figshare.5117788.v1
main_file_link:
- open_access: '1'
  url: https://doi.org/10.6084/m9.figshare.5117788.v1
month: '06'
oa: 1
oa_version: Published Version
publisher: The Royal Society
related_material:
  record:
  - id: '914'
    relation: used_in_publication
    status: public
status: public
title: Raw data from ant queens increase their reproductive efforts after pathogen
  infection
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2017'
...
---
_id: '9855'
abstract:
- lang: eng
  text: Includes derivation of optimal estimation algorithm, generalisation to non-poisson
    noise statistics, correlated input noise, and implementation of in a multi-layer
    neural network.
article_processing_charge: No
author:
- first_name: Matthew J
  full_name: Chalk, Matthew J
  id: 2BAAC544-F248-11E8-B48F-1D18A9856A87
  last_name: Chalk
  orcid: 0000-0001-7782-4436
- first_name: Paul
  full_name: Masset, Paul
  last_name: Masset
- first_name: Boris
  full_name: Gutkin, Boris
  last_name: Gutkin
- first_name: Sophie
  full_name: Denève, Sophie
  last_name: Denève
citation:
  ama: Chalk MJ, Masset P, Gutkin B, Denève S. Supplementary appendix. 2017. doi:<a
    href="https://doi.org/10.1371/journal.pcbi.1005582.s001">10.1371/journal.pcbi.1005582.s001</a>
  apa: Chalk, M. J., Masset, P., Gutkin, B., &#38; Denève, S. (2017). Supplementary
    appendix. Public Library of Science. <a href="https://doi.org/10.1371/journal.pcbi.1005582.s001">https://doi.org/10.1371/journal.pcbi.1005582.s001</a>
  chicago: Chalk, Matthew J, Paul Masset, Boris Gutkin, and Sophie Denève. “Supplementary
    Appendix.” Public Library of Science, 2017. <a href="https://doi.org/10.1371/journal.pcbi.1005582.s001">https://doi.org/10.1371/journal.pcbi.1005582.s001</a>.
  ieee: M. J. Chalk, P. Masset, B. Gutkin, and S. Denève, “Supplementary appendix.”
    Public Library of Science, 2017.
  ista: Chalk MJ, Masset P, Gutkin B, Denève S. 2017. Supplementary appendix, Public
    Library of Science, <a href="https://doi.org/10.1371/journal.pcbi.1005582.s001">10.1371/journal.pcbi.1005582.s001</a>.
  mla: Chalk, Matthew J., et al. <i>Supplementary Appendix</i>. Public Library of
    Science, 2017, doi:<a href="https://doi.org/10.1371/journal.pcbi.1005582.s001">10.1371/journal.pcbi.1005582.s001</a>.
  short: M.J. Chalk, P. Masset, B. Gutkin, S. Denève, (2017).
date_created: 2021-08-10T07:05:10Z
date_published: 2017-06-01T00:00:00Z
date_updated: 2025-09-10T14:20:48Z
day: '01'
department:
- _id: GaTk
doi: 10.1371/journal.pcbi.1005582.s001
month: '06'
oa_version: Published Version
publisher: Public Library of Science
related_material:
  record:
  - id: '680'
    relation: used_in_publication
    status: public
status: public
title: Supplementary appendix
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2017'
...
---
_id: '9856'
article_processing_charge: No
author:
- first_name: Tom
  full_name: Schmidt, Tom
  last_name: Schmidt
- first_name: Nicholas H
  full_name: Barton, Nicholas H
  id: 4880FE40-F248-11E8-B48F-1D18A9856A87
  last_name: Barton
  orcid: 0000-0002-8548-5240
- first_name: Gordana
  full_name: Rasic, Gordana
  last_name: Rasic
- first_name: Andrew
  full_name: Turley, Andrew
  last_name: Turley
- first_name: Brian
  full_name: Montgomery, Brian
  last_name: Montgomery
- first_name: Inaki
  full_name: Iturbe Ormaetxe, Inaki
  last_name: Iturbe Ormaetxe
- first_name: Peter
  full_name: Cook, Peter
  last_name: Cook
- first_name: Peter
  full_name: Ryan, Peter
  last_name: Ryan
- first_name: Scott
  full_name: Ritchie, Scott
  last_name: Ritchie
- first_name: Ary
  full_name: Hoffmann, Ary
  last_name: Hoffmann
- first_name: Scott
  full_name: O’Neill, Scott
  last_name: O’Neill
- first_name: Michael
  full_name: Turelli, Michael
  last_name: Turelli
citation:
  ama: Schmidt T, Barton NH, Rasic G, et al. Supporting Information concerning additional
    likelihood analyses and results. 2017. doi:<a href="https://doi.org/10.1371/journal.pbio.2001894.s014">10.1371/journal.pbio.2001894.s014</a>
  apa: Schmidt, T., Barton, N. H., Rasic, G., Turley, A., Montgomery, B., Iturbe Ormaetxe,
    I., … Turelli, M. (2017). Supporting Information concerning additional likelihood
    analyses and results. Public Library of Science. <a href="https://doi.org/10.1371/journal.pbio.2001894.s014">https://doi.org/10.1371/journal.pbio.2001894.s014</a>
  chicago: Schmidt, Tom, Nicholas H Barton, Gordana Rasic, Andrew Turley, Brian Montgomery,
    Inaki Iturbe Ormaetxe, Peter Cook, et al. “Supporting Information Concerning Additional
    Likelihood Analyses and Results.” Public Library of Science, 2017. <a href="https://doi.org/10.1371/journal.pbio.2001894.s014">https://doi.org/10.1371/journal.pbio.2001894.s014</a>.
  ieee: T. Schmidt <i>et al.</i>, “Supporting Information concerning additional likelihood
    analyses and results.” Public Library of Science, 2017.
  ista: Schmidt T, Barton NH, Rasic G, Turley A, Montgomery B, Iturbe Ormaetxe I,
    Cook P, Ryan P, Ritchie S, Hoffmann A, O’Neill S, Turelli M. 2017. Supporting
    Information concerning additional likelihood analyses and results, Public Library
    of Science, <a href="https://doi.org/10.1371/journal.pbio.2001894.s014">10.1371/journal.pbio.2001894.s014</a>.
  mla: Schmidt, Tom, et al. <i>Supporting Information Concerning Additional Likelihood
    Analyses and Results</i>. Public Library of Science, 2017, doi:<a href="https://doi.org/10.1371/journal.pbio.2001894.s014">10.1371/journal.pbio.2001894.s014</a>.
  short: T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe,
    P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, (2017).
date_created: 2021-08-10T07:36:04Z
date_published: 2017-05-30T00:00:00Z
date_updated: 2025-07-10T12:01:48Z
day: '30'
department:
- _id: NiBa
doi: 10.1371/journal.pbio.2001894.s014
month: '05'
oa_version: Published Version
publisher: Public Library of Science
related_material:
  record:
  - id: '951'
    relation: used_in_publication
    status: public
status: public
title: Supporting Information concerning additional likelihood analyses and results
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2017'
...
---
_id: '9857'
article_processing_charge: No
author:
- first_name: Tom
  full_name: Schmidt, Tom
  last_name: Schmidt
- first_name: Nicholas H
  full_name: Barton, Nicholas H
  id: 4880FE40-F248-11E8-B48F-1D18A9856A87
  last_name: Barton
  orcid: 0000-0002-8548-5240
- first_name: Gordana
  full_name: Rasic, Gordana
  last_name: Rasic
- first_name: Andrew
  full_name: Turley, Andrew
  last_name: Turley
- first_name: Brian
  full_name: Montgomery, Brian
  last_name: Montgomery
- first_name: Inaki
  full_name: Iturbe Ormaetxe, Inaki
  last_name: Iturbe Ormaetxe
- first_name: Peter
  full_name: Cook, Peter
  last_name: Cook
- first_name: Peter
  full_name: Ryan, Peter
  last_name: Ryan
- first_name: Scott
  full_name: Ritchie, Scott
  last_name: Ritchie
- first_name: Ary
  full_name: Hoffmann, Ary
  last_name: Hoffmann
- first_name: Scott
  full_name: O’Neill, Scott
  last_name: O’Neill
- first_name: Michael
  full_name: Turelli, Michael
  last_name: Turelli
citation:
  ama: Schmidt T, Barton NH, Rasic G, et al. Supporting information concerning observed
    wMel frequencies and analyses of habitat variables. 2017. doi:<a href="https://doi.org/10.1371/journal.pbio.2001894.s015">10.1371/journal.pbio.2001894.s015</a>
  apa: Schmidt, T., Barton, N. H., Rasic, G., Turley, A., Montgomery, B., Iturbe Ormaetxe,
    I., … Turelli, M. (2017). Supporting information concerning observed wMel frequencies
    and analyses of habitat variables. Public Library of Science . <a href="https://doi.org/10.1371/journal.pbio.2001894.s015">https://doi.org/10.1371/journal.pbio.2001894.s015</a>
  chicago: Schmidt, Tom, Nicholas H Barton, Gordana Rasic, Andrew Turley, Brian Montgomery,
    Inaki Iturbe Ormaetxe, Peter Cook, et al. “Supporting Information Concerning Observed
    WMel Frequencies and Analyses of Habitat Variables.” Public Library of Science
    , 2017. <a href="https://doi.org/10.1371/journal.pbio.2001894.s015">https://doi.org/10.1371/journal.pbio.2001894.s015</a>.
  ieee: T. Schmidt <i>et al.</i>, “Supporting information concerning observed wMel
    frequencies and analyses of habitat variables.” Public Library of Science , 2017.
  ista: Schmidt T, Barton NH, Rasic G, Turley A, Montgomery B, Iturbe Ormaetxe I,
    Cook P, Ryan P, Ritchie S, Hoffmann A, O’Neill S, Turelli M. 2017. Supporting
    information concerning observed wMel frequencies and analyses of habitat variables,
    Public Library of Science , <a href="https://doi.org/10.1371/journal.pbio.2001894.s015">10.1371/journal.pbio.2001894.s015</a>.
  mla: Schmidt, Tom, et al. <i>Supporting Information Concerning Observed WMel Frequencies
    and Analyses of Habitat Variables</i>. Public Library of Science , 2017, doi:<a
    href="https://doi.org/10.1371/journal.pbio.2001894.s015">10.1371/journal.pbio.2001894.s015</a>.
  short: T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe,
    P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, (2017).
date_created: 2021-08-10T07:41:52Z
date_published: 2017-05-30T00:00:00Z
date_updated: 2025-07-10T12:01:48Z
day: '30'
department:
- _id: NiBa
doi: 10.1371/journal.pbio.2001894.s015
month: '05'
oa_version: Published Version
publisher: 'Public Library of Science '
related_material:
  record:
  - id: '951'
    relation: used_in_publication
    status: public
status: public
title: Supporting information concerning observed wMel frequencies and analyses of
  habitat variables
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2017'
...
---
_id: '9858'
article_processing_charge: No
author:
- first_name: Tom
  full_name: Schmidt, Tom
  last_name: Schmidt
- first_name: Nicholas H
  full_name: Barton, Nicholas H
  id: 4880FE40-F248-11E8-B48F-1D18A9856A87
  last_name: Barton
  orcid: 0000-0002-8548-5240
- first_name: Gordana
  full_name: Rasic, Gordana
  last_name: Rasic
- first_name: Andrew
  full_name: Turley, Andrew
  last_name: Turley
- first_name: Brian
  full_name: Montgomery, Brian
  last_name: Montgomery
- first_name: Inaki
  full_name: Iturbe Ormaetxe, Inaki
  last_name: Iturbe Ormaetxe
- first_name: Peter
  full_name: Cook, Peter
  last_name: Cook
- first_name: Peter
  full_name: Ryan, Peter
  last_name: Ryan
- first_name: Scott
  full_name: Ritchie, Scott
  last_name: Ritchie
- first_name: Ary
  full_name: Hoffmann, Ary
  last_name: Hoffmann
- first_name: Scott
  full_name: O’Neill, Scott
  last_name: O’Neill
- first_name: Michael
  full_name: Turelli, Michael
  last_name: Turelli
citation:
  ama: Schmidt T, Barton NH, Rasic G, et al. Excel file with data on mosquito densities,
    Wolbachia infection status and housing characteristics. 2017. doi:<a href="https://doi.org/10.1371/journal.pbio.2001894.s016">10.1371/journal.pbio.2001894.s016</a>
  apa: Schmidt, T., Barton, N. H., Rasic, G., Turley, A., Montgomery, B., Iturbe Ormaetxe,
    I., … Turelli, M. (2017). Excel file with data on mosquito densities, Wolbachia
    infection status and housing characteristics. Public Library of Science. <a href="https://doi.org/10.1371/journal.pbio.2001894.s016">https://doi.org/10.1371/journal.pbio.2001894.s016</a>
  chicago: Schmidt, Tom, Nicholas H Barton, Gordana Rasic, Andrew Turley, Brian Montgomery,
    Inaki Iturbe Ormaetxe, Peter Cook, et al. “Excel File with Data on Mosquito Densities,
    Wolbachia Infection Status and Housing Characteristics.” Public Library of Science,
    2017. <a href="https://doi.org/10.1371/journal.pbio.2001894.s016">https://doi.org/10.1371/journal.pbio.2001894.s016</a>.
  ieee: T. Schmidt <i>et al.</i>, “Excel file with data on mosquito densities, Wolbachia
    infection status and housing characteristics.” Public Library of Science, 2017.
  ista: Schmidt T, Barton NH, Rasic G, Turley A, Montgomery B, Iturbe Ormaetxe I,
    Cook P, Ryan P, Ritchie S, Hoffmann A, O’Neill S, Turelli M. 2017. Excel file
    with data on mosquito densities, Wolbachia infection status and housing characteristics,
    Public Library of Science, <a href="https://doi.org/10.1371/journal.pbio.2001894.s016">10.1371/journal.pbio.2001894.s016</a>.
  mla: Schmidt, Tom, et al. <i>Excel File with Data on Mosquito Densities, Wolbachia
    Infection Status and Housing Characteristics</i>. Public Library of Science, 2017,
    doi:<a href="https://doi.org/10.1371/journal.pbio.2001894.s016">10.1371/journal.pbio.2001894.s016</a>.
  short: T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe,
    P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, (2017).
date_created: 2021-08-10T07:47:07Z
date_published: 2017-05-30T00:00:00Z
date_updated: 2025-07-10T12:01:48Z
day: '30'
department:
- _id: NiBa
doi: 10.1371/journal.pbio.2001894.s016
month: '05'
oa_version: Published Version
publisher: Public Library of Science
related_material:
  record:
  - id: '951'
    relation: used_in_publication
    status: public
status: public
title: Excel file with data on mosquito densities, Wolbachia infection status and
  housing characteristics
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2017'
...
---
_id: '9859'
abstract:
- lang: eng
  text: 'Lists of all differentially expressed genes in the different priming-challenge
    treatments (compared to the fully naïve control; xlsx file). Relevant columns
    include the following: sample_1 and sample_2 – treatment groups being compared;
    Normalised FPKM sample_1 and sample_2 – FPKM of samples being compared; log2(fold_change)
    – log2(FPKM sample 2/FPKM sample 1), i.e. negative means sample 1 upregulated
    compared with sample 2, positive means sample 2 upregulated compared with sample
    1; cuffdiff test_statistic – test statistic of differential expression test; p_value
    – p-value of differential expression test; q_value (FDR correction) – adjusted
    P-value of differential expression test. (XLSX 598 kb)'
article_processing_charge: No
author:
- first_name: Jenny
  full_name: Greenwood, Jenny
  last_name: Greenwood
- first_name: Barbara
  full_name: Milutinovic, Barbara
  id: 2CDC32B8-F248-11E8-B48F-1D18A9856A87
  last_name: Milutinovic
  orcid: 0000-0002-8214-4758
- first_name: Robert
  full_name: Peuß, Robert
  last_name: Peuß
- first_name: Sarah
  full_name: Behrens, Sarah
  last_name: Behrens
- first_name: Daniela
  full_name: Essar, Daniela
  last_name: Essar
- first_name: Philip
  full_name: Rosenstiel, Philip
  last_name: Rosenstiel
- first_name: Hinrich
  full_name: Schulenburg, Hinrich
  last_name: Schulenburg
- first_name: Joachim
  full_name: Kurtz, Joachim
  last_name: Kurtz
citation:
  ama: 'Greenwood J, Milutinovic B, Peuß R, et al. Additional file 1: Table S1. of
    Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression
    of Tribolium castaneum larvae. 2017. doi:<a href="https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1">10.6084/m9.figshare.c.3756974_d1.v1</a>'
  apa: 'Greenwood, J., Milutinovic, B., Peuß, R., Behrens, S., Essar, D., Rosenstiel,
    P., … Kurtz, J. (2017). Additional file 1: Table S1. of Oral immune priming with
    Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum
    larvae. Springer Nature. <a href="https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1">https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1</a>'
  chicago: 'Greenwood, Jenny, Barbara Milutinovic, Robert Peuß, Sarah Behrens, Daniela
    Essar, Philip Rosenstiel, Hinrich Schulenburg, and Joachim Kurtz. “Additional
    File 1: Table S1. of Oral Immune Priming with Bacillus Thuringiensis Induces a
    Shift in the Gene Expression of Tribolium Castaneum Larvae.” Springer Nature,
    2017. <a href="https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1">https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1</a>.'
  ieee: 'J. Greenwood <i>et al.</i>, “Additional file 1: Table S1. of Oral immune
    priming with Bacillus thuringiensis induces a shift in the gene expression of
    Tribolium castaneum larvae.” Springer Nature, 2017.'
  ista: 'Greenwood J, Milutinovic B, Peuß R, Behrens S, Essar D, Rosenstiel P, Schulenburg
    H, Kurtz J. 2017. Additional file 1: Table S1. of Oral immune priming with Bacillus
    thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae,
    Springer Nature, <a href="https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1">10.6084/m9.figshare.c.3756974_d1.v1</a>.'
  mla: 'Greenwood, Jenny, et al. <i>Additional File 1: Table S1. of Oral Immune Priming
    with Bacillus Thuringiensis Induces a Shift in the Gene Expression of Tribolium
    Castaneum Larvae</i>. Springer Nature, 2017, doi:<a href="https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1">10.6084/m9.figshare.c.3756974_d1.v1</a>.'
  short: J. Greenwood, B. Milutinovic, R. Peuß, S. Behrens, D. Essar, P. Rosenstiel,
    H. Schulenburg, J. Kurtz, (2017).
date_created: 2021-08-10T07:59:02Z
date_published: 2017-04-26T00:00:00Z
date_updated: 2025-07-10T11:49:39Z
day: '26'
department:
- _id: SyCr
doi: 10.6084/m9.figshare.c.3756974_d1.v1
main_file_link:
- open_access: '1'
  url: https://doi.org/10.6084/m9.figshare.c.3756974_d1.v1
month: '04'
oa: 1
oa_version: Published Version
publisher: Springer Nature
related_material:
  record:
  - id: '1006'
    relation: used_in_publication
    status: public
status: public
title: 'Additional file 1: Table S1. of Oral immune priming with Bacillus thuringiensis
  induces a shift in the gene expression of Tribolium castaneum larvae'
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2017'
...
---
_id: '9860'
article_processing_charge: No
author:
- first_name: Jenny
  full_name: Greenwood, Jenny
  last_name: Greenwood
- first_name: Barbara
  full_name: Milutinovic, Barbara
  id: 2CDC32B8-F248-11E8-B48F-1D18A9856A87
  last_name: Milutinovic
  orcid: 0000-0002-8214-4758
- first_name: Robert
  full_name: Peuß, Robert
  last_name: Peuß
- first_name: Sarah
  full_name: Behrens, Sarah
  last_name: Behrens
- first_name: Daniela
  full_name: Essar, Daniela
  last_name: Essar
- first_name: Philip
  full_name: Rosenstiel, Philip
  last_name: Rosenstiel
- first_name: Hinrich
  full_name: Schulenburg, Hinrich
  last_name: Schulenburg
- first_name: Joachim
  full_name: Kurtz, Joachim
  last_name: Kurtz
citation:
  ama: 'Greenwood J, Milutinovic B, Peuß R, et al. Additional file 5: Table S3. of
    Oral immune priming with Bacillus thuringiensis induces a shift in the gene expression
    of Tribolium castaneum larvae. 2017. doi:<a href="https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1">10.6084/m9.figshare.c.3756974_d5.v1</a>'
  apa: 'Greenwood, J., Milutinovic, B., Peuß, R., Behrens, S., Essar, D., Rosenstiel,
    P., … Kurtz, J. (2017). Additional file 5: Table S3. of Oral immune priming with
    Bacillus thuringiensis induces a shift in the gene expression of Tribolium castaneum
    larvae. Springer Nature. <a href="https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1">https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1</a>'
  chicago: 'Greenwood, Jenny, Barbara Milutinovic, Robert Peuß, Sarah Behrens, Daniela
    Essar, Philip Rosenstiel, Hinrich Schulenburg, and Joachim Kurtz. “Additional
    File 5: Table S3. of Oral Immune Priming with Bacillus Thuringiensis Induces a
    Shift in the Gene Expression of Tribolium Castaneum Larvae.” Springer Nature,
    2017. <a href="https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1">https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1</a>.'
  ieee: 'J. Greenwood <i>et al.</i>, “Additional file 5: Table S3. of Oral immune
    priming with Bacillus thuringiensis induces a shift in the gene expression of
    Tribolium castaneum larvae.” Springer Nature, 2017.'
  ista: 'Greenwood J, Milutinovic B, Peuß R, Behrens S, Essar D, Rosenstiel P, Schulenburg
    H, Kurtz J. 2017. Additional file 5: Table S3. of Oral immune priming with Bacillus
    thuringiensis induces a shift in the gene expression of Tribolium castaneum larvae,
    Springer Nature, <a href="https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1">10.6084/m9.figshare.c.3756974_d5.v1</a>.'
  mla: 'Greenwood, Jenny, et al. <i>Additional File 5: Table S3. of Oral Immune Priming
    with Bacillus Thuringiensis Induces a Shift in the Gene Expression of Tribolium
    Castaneum Larvae</i>. Springer Nature, 2017, doi:<a href="https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1">10.6084/m9.figshare.c.3756974_d5.v1</a>.'
  short: J. Greenwood, B. Milutinovic, R. Peuß, S. Behrens, D. Essar, P. Rosenstiel,
    H. Schulenburg, J. Kurtz, (2017).
date_created: 2021-08-10T08:07:12Z
date_published: 2017-04-26T00:00:00Z
date_updated: 2025-07-10T11:49:39Z
day: '26'
department:
- _id: SyCr
doi: 10.6084/m9.figshare.c.3756974_d5.v1
main_file_link:
- open_access: '1'
  url: https://doi.org/10.6084/m9.figshare.c.3756974_d5.v1
month: '04'
oa: 1
oa_version: Published Version
publisher: Springer Nature
related_material:
  record:
  - id: '1006'
    relation: used_in_publication
    status: public
status: public
title: 'Additional file 5: Table S3. of Oral immune priming with Bacillus thuringiensis
  induces a shift in the gene expression of Tribolium castaneum larvae'
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2017'
...
---
_id: '9861'
abstract:
- lang: eng
  text: As a consequence of its difference in copy number between males and females,
    the X chromosome is subject to unique evolutionary forces and gene regulatory
    mechanisms. Previous studies of Drosophila melanogaster have shown that the expression
    of X-linked, testis-specific reporter genes is suppressed in the male germline.
    However, it is not known whether this phenomenon is restricted to testis-expressed
    genes or if it is a more general property of genes with tissue-specific expression,
    which are also underrepresented on the X chromosome. To test this, we compared
    the expression of three tissue-specific reporter genes (ovary, accessory gland
    and Malpighian tubule) inserted at various autosomal and X-chromosomal locations.
    In contrast to testis-specific reporter genes, we found no reduction of X-linked
    expression in any of the other tissues. In accessory gland and Malpighian tubule,
    we detected higher expression of the X-linked reporter genes, which suggests that
    they are at least partially dosage compensated. We found no difference in the
    tissue-specificity of X-linked and autosomal reporter genes. These findings indicate
    that, in general, the X chromosome is not a detrimental environment for tissue-specific
    gene expression and that the suppression of X-linked expression is limited to
    the male germline.
article_processing_charge: No
author:
- first_name: Eliza
  full_name: Argyridou, Eliza
  last_name: Argyridou
- first_name: Ann K
  full_name: Huylmans, Ann K
  id: 4C0A3874-F248-11E8-B48F-1D18A9856A87
  last_name: Huylmans
  orcid: 0000-0001-8871-4961
- first_name: Annabella
  full_name: Königer, Annabella
  last_name: Königer
- first_name: John
  full_name: Parsch, John
  last_name: Parsch
citation:
  ama: 'Argyridou E, Huylmans AK, Königer A, Parsch J. Data from: X-linkage is not
    a general inhibitor of tissue-specific gene expression in Drosophila melanogaster.
    2017. doi:<a href="https://doi.org/10.5061/dryad.02f6r">10.5061/dryad.02f6r</a>'
  apa: 'Argyridou, E., Huylmans, A. K., Königer, A., &#38; Parsch, J. (2017). Data
    from: X-linkage is not a general inhibitor of tissue-specific gene expression
    in Drosophila melanogaster. Dryad. <a href="https://doi.org/10.5061/dryad.02f6r">https://doi.org/10.5061/dryad.02f6r</a>'
  chicago: 'Argyridou, Eliza, Ann K Huylmans, Annabella Königer, and John Parsch.
    “Data from: X-Linkage Is Not a General Inhibitor of Tissue-Specific Gene Expression
    in Drosophila Melanogaster.” Dryad, 2017. <a href="https://doi.org/10.5061/dryad.02f6r">https://doi.org/10.5061/dryad.02f6r</a>.'
  ieee: 'E. Argyridou, A. K. Huylmans, A. Königer, and J. Parsch, “Data from: X-linkage
    is not a general inhibitor of tissue-specific gene expression in Drosophila melanogaster.”
    Dryad, 2017.'
  ista: 'Argyridou E, Huylmans AK, Königer A, Parsch J. 2017. Data from: X-linkage
    is not a general inhibitor of tissue-specific gene expression in Drosophila melanogaster,
    Dryad, <a href="https://doi.org/10.5061/dryad.02f6r">10.5061/dryad.02f6r</a>.'
  mla: 'Argyridou, Eliza, et al. <i>Data from: X-Linkage Is Not a General Inhibitor
    of Tissue-Specific Gene Expression in Drosophila Melanogaster</i>. Dryad, 2017,
    doi:<a href="https://doi.org/10.5061/dryad.02f6r">10.5061/dryad.02f6r</a>.'
  short: E. Argyridou, A.K. Huylmans, A. Königer, J. Parsch, (2017).
date_created: 2021-08-10T08:12:52Z
date_published: 2017-02-14T00:00:00Z
date_updated: 2025-07-10T11:49:45Z
day: '14'
department:
- _id: BeVi
doi: 10.5061/dryad.02f6r
main_file_link:
- open_access: '1'
  url: https://doi.org/10.5061/dryad.02f6r
month: '02'
oa: 1
oa_version: Published Version
publisher: Dryad
related_material:
  record:
  - id: '1019'
    relation: used_in_publication
    status: public
status: public
title: 'Data from: X-linkage is not a general inhibitor of tissue-specific gene expression
  in Drosophila melanogaster'
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2017'
...
---
_id: '988'
abstract:
- lang: eng
  text: The current-phase relation (CPR) of a Josephson junction (JJ) determines how
    the supercurrent evolves with the superconducting phase difference across the
    junction. Knowledge of the CPR is essential in order to understand the response
    of a JJ to various external parameters. Despite the rising interest in ultraclean
    encapsulated graphene JJs, the CPR of such junctions remains unknown. Here, we
    use a fully gate-tunable graphene superconducting quantum intereference device
    (SQUID) to determine the CPR of ballistic graphene JJs. Each of the two JJs in
    the SQUID is made with graphene encapsulated in hexagonal boron nitride. By independently
    controlling the critical current of the JJs, we can operate the SQUID either in
    a symmetric or asymmetric configuration. The highly asymmetric SQUID allows us
    to phase-bias one of the JJs and thereby directly obtain its CPR. The CPR is found
    to be skewed, deviating significantly from a sinusoidal form. The skewness can
    be tuned with the gate voltage and oscillates in antiphase with Fabry-Pérot resistance
    oscillations of the ballistic graphene cavity. We compare our experiments with
    tight-binding calculations that include realistic graphene-superconductor interfaces
    and find a good qualitative agreement.
article_processing_charge: No
author:
- first_name: Gaurav
  full_name: Nanda, Gaurav
  last_name: Nanda
- first_name: Juan L
  full_name: Aguilera Servin, Juan L
  id: 2A67C376-F248-11E8-B48F-1D18A9856A87
  last_name: Aguilera Servin
  orcid: 0000-0002-2862-8372
- first_name: Péter
  full_name: Rakyta, Péter
  last_name: Rakyta
- first_name: Andor
  full_name: Kormányos, Andor
  last_name: Kormányos
- first_name: Reinhold
  full_name: Kleiner, Reinhold
  last_name: Kleiner
- first_name: Dieter
  full_name: Koelle, Dieter
  last_name: Koelle
- first_name: Kazuo
  full_name: Watanabe, Kazuo
  last_name: Watanabe
- first_name: Takashi
  full_name: Taniguchi, Takashi
  last_name: Taniguchi
- first_name: Lieven
  full_name: Vandersypen, Lieven
  last_name: Vandersypen
- first_name: Srijit
  full_name: Goswami, Srijit
  last_name: Goswami
citation:
  ama: Nanda G, Aguilera Servin JL, Rakyta P, et al. Current-phase relation of ballistic
    graphene Josephson junctions. <i>Nano Letters</i>. 2017;17(6):3396-3401. doi:<a
    href="https://doi.org/10.1021/acs.nanolett.7b00097">10.1021/acs.nanolett.7b00097</a>
  apa: Nanda, G., Aguilera Servin, J. L., Rakyta, P., Kormányos, A., Kleiner, R.,
    Koelle, D., … Goswami, S. (2017). Current-phase relation of ballistic graphene
    Josephson junctions. <i>Nano Letters</i>. American Chemical Society. <a href="https://doi.org/10.1021/acs.nanolett.7b00097">https://doi.org/10.1021/acs.nanolett.7b00097</a>
  chicago: Nanda, Gaurav, Juan L Aguilera Servin, Péter Rakyta, Andor Kormányos, Reinhold
    Kleiner, Dieter Koelle, Kazuo Watanabe, Takashi Taniguchi, Lieven Vandersypen,
    and Srijit Goswami. “Current-Phase Relation of Ballistic Graphene Josephson Junctions.”
    <i>Nano Letters</i>. American Chemical Society, 2017. <a href="https://doi.org/10.1021/acs.nanolett.7b00097">https://doi.org/10.1021/acs.nanolett.7b00097</a>.
  ieee: G. Nanda <i>et al.</i>, “Current-phase relation of ballistic graphene Josephson
    junctions,” <i>Nano Letters</i>, vol. 17, no. 6. American Chemical Society, pp.
    3396–3401, 2017.
  ista: Nanda G, Aguilera Servin JL, Rakyta P, Kormányos A, Kleiner R, Koelle D, Watanabe
    K, Taniguchi T, Vandersypen L, Goswami S. 2017. Current-phase relation of ballistic
    graphene Josephson junctions. Nano Letters. 17(6), 3396–3401.
  mla: Nanda, Gaurav, et al. “Current-Phase Relation of Ballistic Graphene Josephson
    Junctions.” <i>Nano Letters</i>, vol. 17, no. 6, American Chemical Society, 2017,
    pp. 3396–401, doi:<a href="https://doi.org/10.1021/acs.nanolett.7b00097">10.1021/acs.nanolett.7b00097</a>.
  short: G. Nanda, J.L. Aguilera Servin, P. Rakyta, A. Kormányos, R. Kleiner, D. Koelle,
    K. Watanabe, T. Taniguchi, L. Vandersypen, S. Goswami, Nano Letters 17 (2017)
    3396–3401.
date_created: 2018-12-11T11:49:33Z
date_published: 2017-05-05T00:00:00Z
date_updated: 2025-07-10T12:02:04Z
day: '05'
ddc:
- '621'
department:
- _id: NanoFab
doi: 10.1021/acs.nanolett.7b00097
external_id:
  isi:
  - '000403631600011'
file:
- access_level: open_access
  checksum: 22021daa90cf13b01becd776838acb7b
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:13:50Z
  date_updated: 2020-07-14T12:48:18Z
  file_id: '5037'
  file_name: IST-2017-826-v1+1_2017_Aguilera-Servin_Current.pdf
  file_size: 508638
  relation: main_file
file_date_updated: 2020-07-14T12:48:18Z
has_accepted_license: '1'
intvolume: '        17'
isi: 1
issue: '6'
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
page: 3396 - 3401
publication: Nano Letters
publication_identifier:
  issn:
  - 1530-6984
publication_status: published
publisher: American Chemical Society
publist_id: '6412'
pubrep_id: '826'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Current-phase relation of ballistic graphene Josephson junctions
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 17
year: '2017'
...
---
_id: '990'
abstract:
- lang: eng
  text: Assortative mating is an important driver of speciation in populations with
    gene flow and is predicted to evolve under certain conditions in few-locus models.
    However, the evolution of assortment is less understood for mating based on quantitative
    traits, which are often characterized by high genetic variability and extensive
    linkage disequilibrium between trait loci. We explore this scenario for a two-deme
    model with migration, by considering a single polygenic trait subject to divergent
    viability selection across demes, as well as assortative mating and sexual selection
    within demes, and investigate how trait divergence is shaped by various evolutionary
    forces. Our analysis reveals the existence of sharp thresholds of assortment strength,
    at which divergence increases dramatically. We also study the evolution of assortment
    via invasion of modifiers of mate discrimination and show that the ES assortment
    strength has an intermediate value under a range of migration-selection parameters,
    even in diverged populations, due to subtle effects which depend sensitively on
    the extent of phenotypic variation within these populations. The evolutionary
    dynamics of the polygenic trait is studied using the hypergeometric and infinitesimal
    models. We further investigate the sensitivity of our results to the assumptions
    of the hypergeometric model, using individual-based simulations.
article_processing_charge: No
author:
- first_name: Himani
  full_name: Sachdeva, Himani
  id: 42377A0A-F248-11E8-B48F-1D18A9856A87
  last_name: Sachdeva
- first_name: Nicholas H
  full_name: Barton, Nicholas H
  id: 4880FE40-F248-11E8-B48F-1D18A9856A87
  last_name: Barton
  orcid: 0000-0002-8548-5240
citation:
  ama: Sachdeva H, Barton NH. Divergence and evolution of assortative mating in a
    polygenic trait model of speciation with gene flow. <i>Evolution; International
    Journal of Organic Evolution</i>. 2017;71(6):1478-1493. doi:<a href="https://doi.org/10.1111/evo.13252">10.1111/evo.13252</a>
  apa: Sachdeva, H., &#38; Barton, N. H. (2017). Divergence and evolution of assortative
    mating in a polygenic trait model of speciation with gene flow. <i>Evolution;
    International Journal of Organic Evolution</i>. Wiley-Blackwell. <a href="https://doi.org/10.1111/evo.13252">https://doi.org/10.1111/evo.13252</a>
  chicago: Sachdeva, Himani, and Nicholas H Barton. “Divergence and Evolution of Assortative
    Mating in a Polygenic Trait Model of Speciation with Gene Flow.” <i>Evolution;
    International Journal of Organic Evolution</i>. Wiley-Blackwell, 2017. <a href="https://doi.org/10.1111/evo.13252">https://doi.org/10.1111/evo.13252</a>.
  ieee: H. Sachdeva and N. H. Barton, “Divergence and evolution of assortative mating
    in a polygenic trait model of speciation with gene flow,” <i>Evolution; International
    Journal of Organic Evolution</i>, vol. 71, no. 6. Wiley-Blackwell, pp. 1478–1493,
    2017.
  ista: Sachdeva H, Barton NH. 2017. Divergence and evolution of assortative mating
    in a polygenic trait model of speciation with gene flow. Evolution; International
    Journal of Organic Evolution. 71(6), 1478–1493.
  mla: Sachdeva, Himani, and Nicholas H. Barton. “Divergence and Evolution of Assortative
    Mating in a Polygenic Trait Model of Speciation with Gene Flow.” <i>Evolution;
    International Journal of Organic Evolution</i>, vol. 71, no. 6, Wiley-Blackwell,
    2017, pp. 1478–93, doi:<a href="https://doi.org/10.1111/evo.13252">10.1111/evo.13252</a>.
  short: H. Sachdeva, N.H. Barton, Evolution; International Journal of Organic Evolution
    71 (2017) 1478–1493.
corr_author: '1'
date_created: 2018-12-11T11:49:34Z
date_published: 2017-06-01T00:00:00Z
date_updated: 2025-07-10T12:02:04Z
day: '01'
ddc:
- '576'
department:
- _id: NiBa
doi: 10.1111/evo.13252
ec_funded: 1
external_id:
  isi:
  - '000403014800005'
  pmid:
  - '28419447'
file:
- access_level: open_access
  checksum: 6d4c38cb1347fd43620d1736c6df5c79
  content_type: application/pdf
  creator: dernst
  date_created: 2019-04-17T07:37:04Z
  date_updated: 2020-07-14T12:48:18Z
  file_id: '6329'
  file_name: 2017_Evolution_Sachdeva_supplement.pdf
  file_size: 625260
  relation: main_file
- access_level: open_access
  checksum: f1d90dd8831b44baf49b4dd176f263af
  content_type: application/pdf
  creator: dernst
  date_created: 2019-04-17T07:37:04Z
  date_updated: 2020-07-14T12:48:18Z
  file_id: '6330'
  file_name: 2017_Evolution_Sachdeva_article.pdf
  file_size: 520110
  relation: main_file
file_date_updated: 2020-07-14T12:48:18Z
has_accepted_license: '1'
intvolume: '        71'
isi: 1
issue: '6'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Submitted Version
page: '1478 - 1493 '
pmid: 1
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
- _id: 25B07788-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '250152'
  name: Limits to selection in biology and in evolutionary computation
publication: Evolution; International Journal of Organic Evolution
publication_identifier:
  issn:
  - 0014-3820
publication_status: published
publisher: Wiley-Blackwell
publist_id: '6409'
pubrep_id: '977'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Divergence and evolution of assortative mating in a polygenic trait model of
  speciation with gene flow
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 71
year: '2017'
...
---
_id: '993'
abstract:
- lang: eng
  text: In real-world applications, observations are often constrained to a small
    fraction of a system. Such spatial subsampling can be caused by the inaccessibility
    or the sheer size of the system, and cannot be overcome by longer sampling. Spatial
    subsampling can strongly bias inferences about a system’s aggregated properties.
    To overcome the bias, we derive analytically a subsampling scaling framework that
    is applicable to different observables, including distributions of neuronal avalanches,
    of number of people infected during an epidemic outbreak, and of node degrees.
    We demonstrate how to infer the correct distributions of the underlying full system,
    how to apply it to distinguish critical from subcritical systems, and how to disentangle
    subsampling and finite size effects. Lastly, we apply subsampling scaling to neuronal
    avalanche models and to recordings from developing neural networks. We show that
    only mature, but not young networks follow power-law scaling, indicating self-organization
    to criticality during development.
article_number: '15140'
article_processing_charge: Yes (in subscription journal)
author:
- first_name: Anna
  full_name: Levina (Martius), Anna
  id: 35AF8020-F248-11E8-B48F-1D18A9856A87
  last_name: Levina (Martius)
- first_name: Viola
  full_name: Priesemann, Viola
  last_name: Priesemann
citation:
  ama: Levina (Martius) A, Priesemann V. Subsampling scaling. <i>Nature Communications</i>.
    2017;8. doi:<a href="https://doi.org/10.1038/ncomms15140">10.1038/ncomms15140</a>
  apa: Levina (Martius), A., &#38; Priesemann, V. (2017). Subsampling scaling. <i>Nature
    Communications</i>. Nature Publishing Group. <a href="https://doi.org/10.1038/ncomms15140">https://doi.org/10.1038/ncomms15140</a>
  chicago: Levina (Martius), Anna, and Viola Priesemann. “Subsampling Scaling.” <i>Nature
    Communications</i>. Nature Publishing Group, 2017. <a href="https://doi.org/10.1038/ncomms15140">https://doi.org/10.1038/ncomms15140</a>.
  ieee: A. Levina (Martius) and V. Priesemann, “Subsampling scaling,” <i>Nature Communications</i>,
    vol. 8. Nature Publishing Group, 2017.
  ista: Levina (Martius) A, Priesemann V. 2017. Subsampling scaling. Nature Communications.
    8, 15140.
  mla: Levina (Martius), Anna, and Viola Priesemann. “Subsampling Scaling.” <i>Nature
    Communications</i>, vol. 8, 15140, Nature Publishing Group, 2017, doi:<a href="https://doi.org/10.1038/ncomms15140">10.1038/ncomms15140</a>.
  short: A. Levina (Martius), V. Priesemann, Nature Communications 8 (2017).
date_created: 2018-12-11T11:49:35Z
date_published: 2017-05-04T00:00:00Z
date_updated: 2025-07-10T12:02:06Z
day: '04'
ddc:
- '005'
- '571'
department:
- _id: GaTk
- _id: JoCs
doi: 10.1038/ncomms15140
ec_funded: 1
external_id:
  isi:
  - '000400560700001'
file:
- access_level: open_access
  checksum: 9880212f8c4c53404c7c6fbf9023c53a
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:15:05Z
  date_updated: 2020-07-14T12:48:19Z
  file_id: '5122'
  file_name: IST-2017-819-v1+1_2017_Levina_SubsamplingScaling.pdf
  file_size: 746224
  relation: main_file
file_date_updated: 2020-07-14T12:48:19Z
has_accepted_license: '1'
intvolume: '         8'
isi: 1
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
publication: Nature Communications
publication_identifier:
  issn:
  - 2041-1723
publication_status: published
publisher: Nature Publishing Group
publist_id: '6406'
pubrep_id: '819'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Subsampling scaling
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2017'
...
---
_id: '994'
abstract:
- lang: eng
  text: The formation of vortices is usually considered to be the main mechanism of
    angular momentum disposal in superfluids. Recently, it was predicted that a superfluid
    can acquire angular momentum via an alternative, microscopic route -- namely,
    through interaction with rotating impurities, forming so-called `angulon quasiparticles'
    [Phys. Rev. Lett. 114, 203001 (2015)]. The angulon instabilities correspond to
    transfer of a small number of angular momentum quanta from the impurity to the
    superfluid, as opposed to vortex instabilities, where angular momentum is quantized
    in units of ℏ  per atom. Furthermore, since conventional impurities (such as molecules)
    represent three-dimensional (3D) rotors, the angular momentum transferred is intrinsically
    3D as well, as opposed to a merely planar rotation which is inherent to vortices.
    Herein we show that the angulon theory can explain the anomalous broadening of
    the spectroscopic lines observed for CH 3   and NH 3   molecules in superfluid
    helium nanodroplets, thereby providing a fingerprint of the emerging angulon instabilities
    in experiment.
article_processing_charge: No
arxiv: 1
author:
- first_name: Igor
  full_name: Cherepanov, Igor
  id: 339C7E5A-F248-11E8-B48F-1D18A9856A87
  last_name: Cherepanov
- first_name: Mikhail
  full_name: Lemeshko, Mikhail
  id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
  last_name: Lemeshko
  orcid: 0000-0002-6990-7802
citation:
  ama: Cherepanov I, Lemeshko M. Fingerprints of angulon instabilities in the spectra
    of matrix-isolated molecules. <i>Physical Review Materials</i>. 2017;1(3). doi:<a
    href="https://doi.org/10.1103/PhysRevMaterials.1.035602">10.1103/PhysRevMaterials.1.035602</a>
  apa: Cherepanov, I., &#38; Lemeshko, M. (2017). Fingerprints of angulon instabilities
    in the spectra of matrix-isolated molecules. <i>Physical Review Materials</i>.
    American Physical Society. <a href="https://doi.org/10.1103/PhysRevMaterials.1.035602">https://doi.org/10.1103/PhysRevMaterials.1.035602</a>
  chicago: Cherepanov, Igor, and Mikhail Lemeshko. “Fingerprints of Angulon Instabilities
    in the Spectra of Matrix-Isolated Molecules.” <i>Physical Review Materials</i>.
    American Physical Society, 2017. <a href="https://doi.org/10.1103/PhysRevMaterials.1.035602">https://doi.org/10.1103/PhysRevMaterials.1.035602</a>.
  ieee: I. Cherepanov and M. Lemeshko, “Fingerprints of angulon instabilities in the
    spectra of matrix-isolated molecules,” <i>Physical Review Materials</i>, vol.
    1, no. 3. American Physical Society, 2017.
  ista: Cherepanov I, Lemeshko M. 2017. Fingerprints of angulon instabilities in the
    spectra of matrix-isolated molecules. Physical Review Materials. 1(3).
  mla: Cherepanov, Igor, and Mikhail Lemeshko. “Fingerprints of Angulon Instabilities
    in the Spectra of Matrix-Isolated Molecules.” <i>Physical Review Materials</i>,
    vol. 1, no. 3, American Physical Society, 2017, doi:<a href="https://doi.org/10.1103/PhysRevMaterials.1.035602">10.1103/PhysRevMaterials.1.035602</a>.
  short: I. Cherepanov, M. Lemeshko, Physical Review Materials 1 (2017).
corr_author: '1'
date_created: 2018-12-11T11:49:35Z
date_published: 2017-08-08T00:00:00Z
date_updated: 2025-06-04T10:15:04Z
day: '08'
department:
- _id: MiLe
doi: 10.1103/PhysRevMaterials.1.035602
ec_funded: 1
external_id:
  arxiv:
  - '1705.09220'
  isi:
  - '000416564000004'
intvolume: '         1'
isi: 1
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1705.09220
month: '08'
oa: 1
oa_version: Submitted Version
project:
- _id: 26031614-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P29902
  name: Quantum rotations in the presence of a many-body environment
- _id: 2564DBCA-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '665385'
  name: International IST Doctoral Program
publication: Physical Review Materials
publication_status: published
publisher: American Physical Society
publist_id: '6405'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Fingerprints of angulon instabilities in the spectra of matrix-isolated molecules
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 1
year: '2017'
...
---
_id: '995'
abstract:
- lang: eng
  text: Recently it was shown that an impurity exchanging orbital angular momentum
    with a surrounding bath can be described in terms of the angulon quasiparticle
    [Phys. Rev. Lett. 118, 095301 (2017)]. The angulon consists of a quantum rotor
    dressed by a many-particle field of boson excitations, and can be formed out of,
    for example, a molecule or a nonspherical atom in superfluid helium, or out of
    an electron coupled to lattice phonons or a Bose condensate. Here we develop an
    approach to the angulon based on the path-integral formalism, which sets the ground
    for a systematic, perturbative treatment of the angulon problem. The resulting
    perturbation series can be interpreted in terms of Feynman diagrams, from which,
    in turn, one can derive a set of diagrammatic rules. These rules extend the machinery
    of the graphical theory of angular momentum - well known from theoretical atomic
    spectroscopy - to the case where an environment with an infinite number of degrees
    of freedom is present. In particular, we show that each diagram can be interpreted
    as a 'skeleton', which enforces angular momentum conservation, dressed by an additional
    many-body contribution. This connection between the angulon theory and the graphical
    theory of angular momentum is particularly important as it allows to systematically
    and substantially simplify the analytical representation of each diagram. In order
    to exemplify the technique, we calculate the 1- and 2-loop contributions to the
    angulon self-energy, the spectral function, and the quasiparticle weight. The
    diagrammatic theory we develop paves the way to investigate next-to-leading order
    quantities in a more compact way compared to the variational approaches.
article_number: '085410'
article_processing_charge: No
arxiv: 1
author:
- first_name: Giacomo
  full_name: Bighin, Giacomo
  id: 4CA96FD4-F248-11E8-B48F-1D18A9856A87
  last_name: Bighin
  orcid: 0000-0001-8823-9777
- first_name: Mikhail
  full_name: Lemeshko, Mikhail
  id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
  last_name: Lemeshko
  orcid: 0000-0002-6990-7802
citation:
  ama: Bighin G, Lemeshko M. Diagrammatic approach to orbital quantum impurities interacting
    with a many-particle environment. <i>Physical Review B - Condensed Matter and
    Materials Physics</i>. 2017;96(8). doi:<a href="https://doi.org/10.1103/PhysRevB.96.085410">10.1103/PhysRevB.96.085410</a>
  apa: Bighin, G., &#38; Lemeshko, M. (2017). Diagrammatic approach to orbital quantum
    impurities interacting with a many-particle environment. <i>Physical Review B
    - Condensed Matter and Materials Physics</i>. American Physical Society. <a href="https://doi.org/10.1103/PhysRevB.96.085410">https://doi.org/10.1103/PhysRevB.96.085410</a>
  chicago: Bighin, Giacomo, and Mikhail Lemeshko. “Diagrammatic Approach to Orbital
    Quantum Impurities Interacting with a Many-Particle Environment.” <i>Physical
    Review B - Condensed Matter and Materials Physics</i>. American Physical Society,
    2017. <a href="https://doi.org/10.1103/PhysRevB.96.085410">https://doi.org/10.1103/PhysRevB.96.085410</a>.
  ieee: G. Bighin and M. Lemeshko, “Diagrammatic approach to orbital quantum impurities
    interacting with a many-particle environment,” <i>Physical Review B - Condensed
    Matter and Materials Physics</i>, vol. 96, no. 8. American Physical Society, 2017.
  ista: Bighin G, Lemeshko M. 2017. Diagrammatic approach to orbital quantum impurities
    interacting with a many-particle environment. Physical Review B - Condensed Matter
    and Materials Physics. 96(8), 085410.
  mla: Bighin, Giacomo, and Mikhail Lemeshko. “Diagrammatic Approach to Orbital Quantum
    Impurities Interacting with a Many-Particle Environment.” <i>Physical Review B
    - Condensed Matter and Materials Physics</i>, vol. 96, no. 8, 085410, American
    Physical Society, 2017, doi:<a href="https://doi.org/10.1103/PhysRevB.96.085410">10.1103/PhysRevB.96.085410</a>.
  short: G. Bighin, M. Lemeshko, Physical Review B - Condensed Matter and Materials
    Physics 96 (2017).
corr_author: '1'
date_created: 2018-12-11T11:49:36Z
date_published: 2017-08-07T00:00:00Z
date_updated: 2025-06-04T08:17:18Z
day: '07'
department:
- _id: MiLe
doi: 10.1103/PhysRevB.96.085410
external_id:
  arxiv:
  - '1704.02616'
  isi:
  - '000407017100009'
intvolume: '        96'
isi: 1
issue: '8'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1704.02616
month: '08'
oa: 1
oa_version: Submitted Version
project:
- _id: 26031614-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P29902
  name: Quantum rotations in the presence of a many-body environment
publication: Physical Review B - Condensed Matter and Materials Physics
publication_identifier:
  issn:
  - 2469-9950
publication_status: published
publisher: American Physical Society
publist_id: '6404'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Diagrammatic approach to orbital quantum impurities interacting with a many-particle
  environment
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 96
year: '2017'
...
---
_id: '996'
abstract:
- lang: eng
  text: 'Iodine (I 2  ) molecules embedded in He nanodroplets are aligned by a 160
    ps long laser pulse. The highest degree of alignment, occurring at the peak of
    the pulse and quantified by ⟨cos 2 θ 2D ⟩ , is measured as a function of the laser
    intensity. The results are well described by ⟨cos 2 θ 2D ⟩  calculated for a gas
    of isolated molecules each with an effective rotational constant of 0.6 times
    the gas-phase value, and at a temperature of 0.4 K. Theoretical analysis using
    the angulon quasiparticle to describe rotating molecules in superfluid helium
    rationalizes why the alignment mechanism is similar to that of isolated molecules
    with an effective rotational constant. A major advantage of molecules in He droplets
    is that their 0.4 K temperature leads to stronger alignment than what can generally
    be achieved for gas phase molecules -- here demonstrated by a direct comparison
    of the droplet results to measurements on a ∼  1 K supersonic beam of isolated
    molecules. This point is further illustrated for more complex system by measurements
    on 1,4-diiodobenzene and 1,4-dibromobenzene. For all three molecular species studied
    the highest values of ⟨cos 2 θ 2D ⟩  achieved in He droplets exceed 0.96. '
article_number: '013946'
article_processing_charge: No
arxiv: 1
author:
- first_name: Benjamin
  full_name: Shepperson, Benjamin
  last_name: Shepperson
- first_name: Adam
  full_name: Chatterley, Adam
  last_name: Chatterley
- first_name: Anders
  full_name: Søndergaard, Anders
  last_name: Søndergaard
- first_name: Lars
  full_name: Christiansen, Lars
  last_name: Christiansen
- first_name: Mikhail
  full_name: Lemeshko, Mikhail
  id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
  last_name: Lemeshko
  orcid: 0000-0002-6990-7802
- first_name: Henrik
  full_name: Stapelfeldt, Henrik
  last_name: Stapelfeldt
citation:
  ama: Shepperson B, Chatterley A, Søndergaard A, Christiansen L, Lemeshko M, Stapelfeldt
    H. Strongly aligned molecules inside helium droplets in the near-adiabatic regime.
    <i>The Journal of Chemical Physics</i>. 2017;147(1). doi:<a href="https://doi.org/10.1063/1.4983703">10.1063/1.4983703</a>
  apa: Shepperson, B., Chatterley, A., Søndergaard, A., Christiansen, L., Lemeshko,
    M., &#38; Stapelfeldt, H. (2017). Strongly aligned molecules inside helium droplets
    in the near-adiabatic regime. <i>The Journal of Chemical Physics</i>. AIP Publishing.
    <a href="https://doi.org/10.1063/1.4983703">https://doi.org/10.1063/1.4983703</a>
  chicago: Shepperson, Benjamin, Adam Chatterley, Anders Søndergaard, Lars Christiansen,
    Mikhail Lemeshko, and Henrik Stapelfeldt. “Strongly Aligned Molecules inside Helium
    Droplets in the Near-Adiabatic Regime.” <i>The Journal of Chemical Physics</i>.
    AIP Publishing, 2017. <a href="https://doi.org/10.1063/1.4983703">https://doi.org/10.1063/1.4983703</a>.
  ieee: B. Shepperson, A. Chatterley, A. Søndergaard, L. Christiansen, M. Lemeshko,
    and H. Stapelfeldt, “Strongly aligned molecules inside helium droplets in the
    near-adiabatic regime,” <i>The Journal of Chemical Physics</i>, vol. 147, no.
    1. AIP Publishing, 2017.
  ista: Shepperson B, Chatterley A, Søndergaard A, Christiansen L, Lemeshko M, Stapelfeldt
    H. 2017. Strongly aligned molecules inside helium droplets in the near-adiabatic
    regime. The Journal of Chemical Physics. 147(1), 013946.
  mla: Shepperson, Benjamin, et al. “Strongly Aligned Molecules inside Helium Droplets
    in the Near-Adiabatic Regime.” <i>The Journal of Chemical Physics</i>, vol. 147,
    no. 1, 013946, AIP Publishing, 2017, doi:<a href="https://doi.org/10.1063/1.4983703">10.1063/1.4983703</a>.
  short: B. Shepperson, A. Chatterley, A. Søndergaard, L. Christiansen, M. Lemeshko,
    H. Stapelfeldt, The Journal of Chemical Physics 147 (2017).
date_created: 2018-12-11T11:49:36Z
date_published: 2017-06-01T00:00:00Z
date_updated: 2025-06-04T08:17:46Z
day: '01'
department:
- _id: MiLe
doi: 10.1063/1.4983703
external_id:
  arxiv:
  - '1704.03684'
  isi:
  - '000405089400047'
intvolume: '       147'
isi: 1
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1704.03684
month: '06'
oa: 1
oa_version: Submitted Version
publication: The Journal of Chemical Physics
publication_identifier:
  issn:
  - 0021-9606
publication_status: published
publisher: AIP Publishing
publist_id: '6403'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Strongly aligned molecules inside helium droplets in the near-adiabatic regime
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 147
year: '2017'
...
---
_id: '997'
abstract:
- lang: eng
  text: Recently it was shown that molecules rotating in superfluid helium can be
    described in terms of the angulon quasiparticles (Phys. Rev. Lett. 118, 095301
    (2017)). Here we demonstrate that in the experimentally realized regime the angulon
    can be seen as a point charge on a 2-sphere interacting with a gauge field of
    a non-abelian magnetic monopole. Unlike in several other settings, the gauge fields
    of the angulon problem emerge in the real coordinate space, as opposed to the
    momentum space or some effective parameter space. Furthermore, we find a topological
    transition associated with making the monopole abelian, which takes place in the
    vicinity of the previously reported angulon instabilities. These results pave
    the way for studying topological phenomena in experiments on molecules trapped
    in superfluid helium nanodroplets, as well as on other realizations of orbital
    impurity problems.
article_number: '235301'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Enderalp
  full_name: Yakaboylu, Enderalp
  id: 38CB71F6-F248-11E8-B48F-1D18A9856A87
  last_name: Yakaboylu
  orcid: 0000-0001-5973-0874
- first_name: Andreas
  full_name: Deuchert, Andreas
  id: 4DA65CD0-F248-11E8-B48F-1D18A9856A87
  last_name: Deuchert
  orcid: 0000-0003-3146-6746
- first_name: Mikhail
  full_name: Lemeshko, Mikhail
  id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
  last_name: Lemeshko
  orcid: 0000-0002-6990-7802
citation:
  ama: Yakaboylu E, Deuchert A, Lemeshko M. Emergence of non-abelian magnetic monopoles
    in a quantum impurity problem. <i>Physical Review Letters</i>. 2017;119(23). doi:<a
    href="https://doi.org/10.1103/PhysRevLett.119.235301">10.1103/PhysRevLett.119.235301</a>
  apa: Yakaboylu, E., Deuchert, A., &#38; Lemeshko, M. (2017). Emergence of non-abelian
    magnetic monopoles in a quantum impurity problem. <i>Physical Review Letters</i>.
    American Physical Society. <a href="https://doi.org/10.1103/PhysRevLett.119.235301">https://doi.org/10.1103/PhysRevLett.119.235301</a>
  chicago: Yakaboylu, Enderalp, Andreas Deuchert, and Mikhail Lemeshko. “Emergence
    of Non-Abelian Magnetic Monopoles in a Quantum Impurity Problem.” <i>Physical
    Review Letters</i>. American Physical Society, 2017. <a href="https://doi.org/10.1103/PhysRevLett.119.235301">https://doi.org/10.1103/PhysRevLett.119.235301</a>.
  ieee: E. Yakaboylu, A. Deuchert, and M. Lemeshko, “Emergence of non-abelian magnetic
    monopoles in a quantum impurity problem,” <i>Physical Review Letters</i>, vol.
    119, no. 23. American Physical Society, 2017.
  ista: Yakaboylu E, Deuchert A, Lemeshko M. 2017. Emergence of non-abelian magnetic
    monopoles in a quantum impurity problem. Physical Review Letters. 119(23), 235301.
  mla: Yakaboylu, Enderalp, et al. “Emergence of Non-Abelian Magnetic Monopoles in
    a Quantum Impurity Problem.” <i>Physical Review Letters</i>, vol. 119, no. 23,
    235301, American Physical Society, 2017, doi:<a href="https://doi.org/10.1103/PhysRevLett.119.235301">10.1103/PhysRevLett.119.235301</a>.
  short: E. Yakaboylu, A. Deuchert, M. Lemeshko, Physical Review Letters 119 (2017).
corr_author: '1'
date_created: 2018-12-11T11:49:36Z
date_published: 2017-12-06T00:00:00Z
date_updated: 2025-04-14T07:26:54Z
day: '06'
department:
- _id: MiLe
- _id: RoSe
doi: 10.1103/PhysRevLett.119.235301
ec_funded: 1
external_id:
  arxiv:
  - '1705.05162'
  isi:
  - '000417132100007'
intvolume: '       119'
isi: 1
issue: '23'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1705.05162
month: '12'
oa: 1
oa_version: Preprint
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
- _id: 25C6DC12-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '694227'
  name: Analysis of quantum many-body systems
- _id: 26031614-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P29902
  name: Quantum rotations in the presence of a many-body environment
publication: Physical Review Letters
publication_identifier:
  issn:
  - 0031-9007
publication_status: published
publisher: American Physical Society
publist_id: '6401'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Emergence of non-abelian magnetic monopoles in a quantum impurity problem
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 119
year: '2017'
...
---
_id: '998'
abstract:
- lang: eng
  text: 'A major open problem on the road to artificial intelligence is the development
    of incrementally learning systems that learn about more and more concepts over
    time from a stream of data. In this work, we introduce a new training strategy,
    iCaRL, that allows learning in such a class-incremental way: only the training
    data for a small number of classes has to be present at the same time and new
    classes can be added progressively. iCaRL learns strong classifiers and a data
    representation simultaneously. This distinguishes it from earlier works that were
    fundamentally limited to fixed data representations and therefore incompatible
    with deep learning architectures. We show by experiments on CIFAR-100 and ImageNet
    ILSVRC 2012 data that iCaRL can learn many classes incrementally over a long period
    of time where other strategies quickly fail. '
article_processing_charge: No
arxiv: 1
author:
- first_name: Sylvestre Alvise
  full_name: Rebuffi, Sylvestre Alvise
  last_name: Rebuffi
- first_name: Alexander
  full_name: Kolesnikov, Alexander
  id: 2D157DB6-F248-11E8-B48F-1D18A9856A87
  last_name: Kolesnikov
- first_name: Georg
  full_name: Sperl, Georg
  id: 4DD40360-F248-11E8-B48F-1D18A9856A87
  last_name: Sperl
- first_name: Christoph
  full_name: Lampert, Christoph
  id: 40C20FD2-F248-11E8-B48F-1D18A9856A87
  last_name: Lampert
  orcid: 0000-0001-8622-7887
citation:
  ama: 'Rebuffi SA, Kolesnikov A, Sperl G, Lampert C. iCaRL: Incremental classifier
    and representation learning. In: Vol 2017. IEEE; 2017:5533-5542. doi:<a href="https://doi.org/10.1109/CVPR.2017.587">10.1109/CVPR.2017.587</a>'
  apa: 'Rebuffi, S. A., Kolesnikov, A., Sperl, G., &#38; Lampert, C. (2017). iCaRL:
    Incremental classifier and representation learning (Vol. 2017, pp. 5533–5542).
    Presented at the CVPR: Computer Vision and Pattern Recognition, Honolulu, HA,
    United States: IEEE. <a href="https://doi.org/10.1109/CVPR.2017.587">https://doi.org/10.1109/CVPR.2017.587</a>'
  chicago: 'Rebuffi, Sylvestre Alvise, Alexander Kolesnikov, Georg Sperl, and Christoph
    Lampert. “ICaRL: Incremental Classifier and Representation Learning,” 2017:5533–42.
    IEEE, 2017. <a href="https://doi.org/10.1109/CVPR.2017.587">https://doi.org/10.1109/CVPR.2017.587</a>.'
  ieee: 'S. A. Rebuffi, A. Kolesnikov, G. Sperl, and C. Lampert, “iCaRL: Incremental
    classifier and representation learning,” presented at the CVPR: Computer Vision
    and Pattern Recognition, Honolulu, HA, United States, 2017, vol. 2017, pp. 5533–5542.'
  ista: 'Rebuffi SA, Kolesnikov A, Sperl G, Lampert C. 2017. iCaRL: Incremental classifier
    and representation learning. CVPR: Computer Vision and Pattern Recognition vol.
    2017, 5533–5542.'
  mla: 'Rebuffi, Sylvestre Alvise, et al. <i>ICaRL: Incremental Classifier and Representation
    Learning</i>. Vol. 2017, IEEE, 2017, pp. 5533–42, doi:<a href="https://doi.org/10.1109/CVPR.2017.587">10.1109/CVPR.2017.587</a>.'
  short: S.A. Rebuffi, A. Kolesnikov, G. Sperl, C. Lampert, in:, IEEE, 2017, pp. 5533–5542.
conference:
  end_date: 2017-07-26
  location: Honolulu, HA, United States
  name: 'CVPR: Computer Vision and Pattern Recognition'
  start_date: 2017-07-21
date_created: 2018-12-11T11:49:37Z
date_published: 2017-04-14T00:00:00Z
date_updated: 2025-06-04T08:18:32Z
day: '14'
department:
- _id: ChLa
- _id: ChWo
doi: 10.1109/CVPR.2017.587
ec_funded: 1
external_id:
  arxiv:
  - '1611.07725'
  isi:
  - '000418371405066'
intvolume: '      2017'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1611.07725
month: '04'
oa: 1
oa_version: Submitted Version
page: 5533 - 5542
project:
- _id: 2532554C-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '308036'
  name: Lifelong Learning of Visual Scene Understanding
publication_identifier:
  isbn:
  - 978-153860457-1
publication_status: published
publisher: IEEE
publist_id: '6400'
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'iCaRL: Incremental classifier and representation learning'
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 2017
year: '2017'
...
