---
_id: '626'
abstract:
- lang: eng
  text: 'Our focus here is on the infinitesimal model. In this model, one or several
    quantitative traits are described as the sum of a genetic and a non-genetic component,
    the first being distributed within families as a normal random variable centred
    at the average of the parental genetic components, and with a variance independent
    of the parental traits. Thus, the variance that segregates within families is
    not perturbed by selection, and can be predicted from the variance components.
    This does not necessarily imply that the trait distribution across the whole population
    should be Gaussian, and indeed selection or population structure may have a substantial
    effect on the overall trait distribution. One of our main aims is to identify
    some general conditions on the allelic effects for the infinitesimal model to
    be accurate. We first review the long history of the infinitesimal model in quantitative
    genetics. Then we formulate the model at the phenotypic level in terms of individual
    trait values and relationships between individuals, but including different evolutionary
    processes: genetic drift, recombination, selection, mutation, population structure,
    …. We give a range of examples of its application to evolutionary questions related
    to stabilising selection, assortative mating, effective population size and response
    to selection, habitat preference and speciation. We provide a mathematical justification
    of the model as the limit as the number M of underlying loci tends to infinity
    of a model with Mendelian inheritance, mutation and environmental noise, when
    the genetic component of the trait is purely additive. We also show how the model
    generalises to include epistatic effects. We prove in particular that, within
    each family, the genetic components of the individual trait values in the current
    generation are indeed normally distributed with a variance independent of ancestral
    traits, up to an error of order 1∕M. Simulations suggest that in some cases the
    convergence may be as fast as 1∕M.'
article_processing_charge: No
author:
- first_name: Nicholas H
  full_name: Barton, Nicholas H
  id: 4880FE40-F248-11E8-B48F-1D18A9856A87
  last_name: Barton
  orcid: 0000-0002-8548-5240
- first_name: Alison
  full_name: Etheridge, Alison
  last_name: Etheridge
- first_name: Amandine
  full_name: Véber, Amandine
  last_name: Véber
citation:
  ama: 'Barton NH, Etheridge A, Véber A. The infinitesimal model: Definition derivation
    and implications. <i>Theoretical Population Biology</i>. 2017;118:50-73. doi:<a
    href="https://doi.org/10.1016/j.tpb.2017.06.001">10.1016/j.tpb.2017.06.001</a>'
  apa: 'Barton, N. H., Etheridge, A., &#38; Véber, A. (2017). The infinitesimal model:
    Definition derivation and implications. <i>Theoretical Population Biology</i>.
    Academic Press. <a href="https://doi.org/10.1016/j.tpb.2017.06.001">https://doi.org/10.1016/j.tpb.2017.06.001</a>'
  chicago: 'Barton, Nicholas H, Alison Etheridge, and Amandine Véber. “The Infinitesimal
    Model: Definition Derivation and Implications.” <i>Theoretical Population Biology</i>.
    Academic Press, 2017. <a href="https://doi.org/10.1016/j.tpb.2017.06.001">https://doi.org/10.1016/j.tpb.2017.06.001</a>.'
  ieee: 'N. H. Barton, A. Etheridge, and A. Véber, “The infinitesimal model: Definition
    derivation and implications,” <i>Theoretical Population Biology</i>, vol. 118.
    Academic Press, pp. 50–73, 2017.'
  ista: 'Barton NH, Etheridge A, Véber A. 2017. The infinitesimal model: Definition
    derivation and implications. Theoretical Population Biology. 118, 50–73.'
  mla: 'Barton, Nicholas H., et al. “The Infinitesimal Model: Definition Derivation
    and Implications.” <i>Theoretical Population Biology</i>, vol. 118, Academic Press,
    2017, pp. 50–73, doi:<a href="https://doi.org/10.1016/j.tpb.2017.06.001">10.1016/j.tpb.2017.06.001</a>.'
  short: N.H. Barton, A. Etheridge, A. Véber, Theoretical Population Biology 118 (2017)
    50–73.
corr_author: '1'
date_created: 2018-12-11T11:47:34Z
date_published: 2017-12-01T00:00:00Z
date_updated: 2025-09-11T07:29:31Z
day: '01'
ddc:
- '576'
department:
- _id: NiBa
doi: 10.1016/j.tpb.2017.06.001
ec_funded: 1
external_id:
  isi:
  - '000417668700005'
file:
- access_level: open_access
  checksum: 7dd02bfcfe8f244f4a6c19091aedf2c8
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:12:45Z
  date_updated: 2020-07-14T12:47:25Z
  file_id: '4964'
  file_name: IST-2017-908-v1+1_1-s2.0-S0040580917300886-main_1_.pdf
  file_size: 1133924
  relation: main_file
file_date_updated: 2020-07-14T12:47:25Z
has_accepted_license: '1'
intvolume: '       118'
isi: 1
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
page: 50 - 73
project:
- _id: 25B07788-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '250152'
  name: Limits to selection in biology and in evolutionary computation
publication: Theoretical Population Biology
publication_identifier:
  issn:
  - 0040-5809
publication_status: published
publisher: Academic Press
publist_id: '7169'
pubrep_id: '908'
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The infinitesimal model: Definition derivation and implications'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 118
year: '2017'
...
---
_id: '627'
abstract:
- lang: eng
  text: Beige adipocytes are a new type of recruitable brownish adipocytes, with highly
    mitochondrial membrane uncoupling protein 1 expression and thermogenesis. Beige
    adipocytes were found among white adipocytes, especially in subcutaneous white
    adipose tissue (sWAT). Therefore, beige adipocytes may be involved in the regulation
    of energy metabolism and fat deposition. Transient receptor potential melastatin
    8 (TRPM8), a Ca2+-permeable non-selective cation channel, plays vital roles in
    the regulation of various cellular functions. It has been reported that TRPM8
    activation enhanced the thermogenic function of brown adiposytes. However, the
    involvement of TRPM8 in the thermogenic function of WAT remains unexplored. Our
    data revealed that TRPM8 was expressed in mouse white adipocytes at mRNA, protein
    and functional levels. The mRNA expression of Trpm8 was significantly increased
    in the differentiated white adipocytes than pre-adipocytes. Moreover, activation
    of TRPM8 by menthol enhanced the expression of thermogenic genes in cultured white
    aidpocytes. And menthol-induced increases of the thermogenic genes in white adipocytes
    was inhibited by either KT5720 (a protein kinase A inhibitor) or BAPTA-AM. In
    addition, high fat diet (HFD)-induced obesity in mice was significantly recovered
    by co-treatment with menthol. Dietary menthol enhanced WAT &quot;browning&quot;
    and improved glucose metabolism in HFD-induced obesity mice as well. Therefore,
    we concluded that TRPM8 might be involved in WAT &quot;browning&quot; by increasing
    the expression levels of genes related to thermogenesis and energy metabolism.
    And dietary menthol could be a novel approach for combating human obesity and
    related metabolic diseases.
article_processing_charge: No
author:
- first_name: Changyu
  full_name: Jiang, Changyu
  last_name: Jiang
- first_name: Ming-Zhu
  full_name: Zhai, Ming-Zhu
  id: 34009CFA-F248-11E8-B48F-1D18A9856A87
  last_name: Zhai
- first_name: Dong
  full_name: Yan, Dong
  last_name: Yan
- first_name: Da
  full_name: Li, Da
  last_name: Li
- first_name: Chen
  full_name: Li, Chen
  last_name: Li
- first_name: Yonghong
  full_name: Zhang, Yonghong
  last_name: Zhang
- first_name: Lizu
  full_name: Xiao, Lizu
  last_name: Xiao
- first_name: Donglin
  full_name: Xiong, Donglin
  last_name: Xiong
- first_name: Qiwen
  full_name: Deng, Qiwen
  last_name: Deng
- first_name: Wuping
  full_name: Sun, Wuping
  last_name: Sun
citation:
  ama: Jiang C, Zhai M-Z, Yan D, et al. Dietary menthol-induced TRPM8 activation enhances
    WAT “browning” and ameliorates diet-induced obesity. <i>Oncotarget</i>. 2017;8(43):75114-75126.
    doi:<a href="https://doi.org/10.18632/oncotarget.20540">10.18632/oncotarget.20540</a>
  apa: Jiang, C., Zhai, M.-Z., Yan, D., Li, D., Li, C., Zhang, Y., … Sun, W. (2017).
    Dietary menthol-induced TRPM8 activation enhances WAT “browning” and ameliorates
    diet-induced obesity. <i>Oncotarget</i>. Impact Journals. <a href="https://doi.org/10.18632/oncotarget.20540">https://doi.org/10.18632/oncotarget.20540</a>
  chicago: Jiang, Changyu, Ming-Zhu Zhai, Dong Yan, Da Li, Chen Li, Yonghong Zhang,
    Lizu Xiao, Donglin Xiong, Qiwen Deng, and Wuping Sun. “Dietary Menthol-Induced
    TRPM8 Activation Enhances WAT ‘Browning’ and Ameliorates Diet-Induced Obesity.”
    <i>Oncotarget</i>. Impact Journals, 2017. <a href="https://doi.org/10.18632/oncotarget.20540">https://doi.org/10.18632/oncotarget.20540</a>.
  ieee: C. Jiang <i>et al.</i>, “Dietary menthol-induced TRPM8 activation enhances
    WAT ‘browning’ and ameliorates diet-induced obesity,” <i>Oncotarget</i>, vol.
    8, no. 43. Impact Journals, pp. 75114–75126, 2017.
  ista: Jiang C, Zhai M-Z, Yan D, Li D, Li C, Zhang Y, Xiao L, Xiong D, Deng Q, Sun
    W. 2017. Dietary menthol-induced TRPM8 activation enhances WAT “browning” and
    ameliorates diet-induced obesity. Oncotarget. 8(43), 75114–75126.
  mla: Jiang, Changyu, et al. “Dietary Menthol-Induced TRPM8 Activation Enhances WAT
    ‘Browning’ and Ameliorates Diet-Induced Obesity.” <i>Oncotarget</i>, vol. 8, no.
    43, Impact Journals, 2017, pp. 75114–26, doi:<a href="https://doi.org/10.18632/oncotarget.20540">10.18632/oncotarget.20540</a>.
  short: C. Jiang, M.-Z. Zhai, D. Yan, D. Li, C. Li, Y. Zhang, L. Xiao, D. Xiong,
    Q. Deng, W. Sun, Oncotarget 8 (2017) 75114–75126.
date_created: 2018-12-11T11:47:34Z
date_published: 2017-08-24T00:00:00Z
date_updated: 2025-09-11T07:28:59Z
day: '24'
ddc:
- '571'
department:
- _id: RySh
doi: 10.18632/oncotarget.20540
external_id:
  isi:
  - '000411760400142'
file:
- access_level: open_access
  checksum: 2219e5348bbfe1aac2725aa620c33280
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:16:15Z
  date_updated: 2020-07-14T12:47:26Z
  file_id: '5201'
  file_name: IST-2017-907-v1+1_20540-294640-4-PB.pdf
  file_size: 6101606
  relation: main_file
file_date_updated: 2020-07-14T12:47:26Z
has_accepted_license: '1'
intvolume: '         8'
isi: 1
issue: '43'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: 75114 - 75126
publication: Oncotarget
publication_identifier:
  issn:
  - 1949-2553
publication_status: published
publisher: Impact Journals
publist_id: '7167'
pubrep_id: '907'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Dietary menthol-induced TRPM8 activation enhances WAT “browning” and ameliorates
  diet-induced obesity
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 8
year: '2017'
...
---
_id: '628'
abstract:
- lang: eng
  text: We consider the problem of developing automated techniques for solving recurrence
    relations to aid the expected-runtime analysis of programs. The motivation is
    that several classical textbook algorithms have quite efficient expected-runtime
    complexity, whereas the corresponding worst-case bounds are either inefficient
    (e.g., Quick-Sort), or completely ineffective (e.g., Coupon-Collector). Since
    the main focus of expected-runtime analysis is to obtain efficient bounds, we
    consider bounds that are either logarithmic, linear or almost-linear (O(log n),
    O(n), O(n · log n), respectively, where n represents the input size). Our main
    contribution is an efficient (simple linear-time algorithm) sound approach for
    deriving such expected-runtime bounds for the analysis of recurrence relations
    induced by randomized algorithms. The experimental results show that our approach
    can efficiently derive asymptotically optimal expected-runtime bounds for recurrences
    of classical randomized algorithms, including Randomized-Search, Quick-Sort, Quick-Select,
    Coupon-Collector, where the worst-case bounds are either inefficient (such as
    linear as compared to logarithmic expected-runtime complexity, or quadratic as
    compared to linear or almost-linear expected-runtime complexity), or ineffective.
alternative_title:
- LNCS
article_processing_charge: No
arxiv: 1
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Hongfei
  full_name: Fu, Hongfei
  last_name: Fu
- first_name: Aniket
  full_name: Murhekar, Aniket
  last_name: Murhekar
citation:
  ama: 'Chatterjee K, Fu H, Murhekar A. Automated recurrence analysis for almost linear
    expected runtime bounds. In: Majumdar R, Kunčak V, eds. Vol 10426. Springer; 2017:118-139.
    doi:<a href="https://doi.org/10.1007/978-3-319-63387-9_6">10.1007/978-3-319-63387-9_6</a>'
  apa: 'Chatterjee, K., Fu, H., &#38; Murhekar, A. (2017). Automated recurrence analysis
    for almost linear expected runtime bounds. In R. Majumdar &#38; V. Kunčak (Eds.)
    (Vol. 10426, pp. 118–139). Presented at the CAV: Computer Aided Verification,
    Heidelberg, Germany: Springer. <a href="https://doi.org/10.1007/978-3-319-63387-9_6">https://doi.org/10.1007/978-3-319-63387-9_6</a>'
  chicago: Chatterjee, Krishnendu, Hongfei Fu, and Aniket Murhekar. “Automated Recurrence
    Analysis for Almost Linear Expected Runtime Bounds.” edited by Rupak Majumdar
    and Viktor Kunčak, 10426:118–39. Springer, 2017. <a href="https://doi.org/10.1007/978-3-319-63387-9_6">https://doi.org/10.1007/978-3-319-63387-9_6</a>.
  ieee: 'K. Chatterjee, H. Fu, and A. Murhekar, “Automated recurrence analysis for
    almost linear expected runtime bounds,” presented at the CAV: Computer Aided Verification,
    Heidelberg, Germany, 2017, vol. 10426, pp. 118–139.'
  ista: 'Chatterjee K, Fu H, Murhekar A. 2017. Automated recurrence analysis for almost
    linear expected runtime bounds. CAV: Computer Aided Verification, LNCS, vol. 10426,
    118–139.'
  mla: Chatterjee, Krishnendu, et al. <i>Automated Recurrence Analysis for Almost
    Linear Expected Runtime Bounds</i>. Edited by Rupak Majumdar and Viktor Kunčak,
    vol. 10426, Springer, 2017, pp. 118–39, doi:<a href="https://doi.org/10.1007/978-3-319-63387-9_6">10.1007/978-3-319-63387-9_6</a>.
  short: K. Chatterjee, H. Fu, A. Murhekar, in:, R. Majumdar, V. Kunčak (Eds.), Springer,
    2017, pp. 118–139.
conference:
  end_date: 2017-07-28
  location: Heidelberg, Germany
  name: 'CAV: Computer Aided Verification'
  start_date: 2017-07-24
date_created: 2018-12-11T11:47:35Z
date_published: 2017-01-01T00:00:00Z
date_updated: 2025-09-11T07:28:26Z
day: '01'
department:
- _id: KrCh
doi: 10.1007/978-3-319-63387-9_6
ec_funded: 1
editor:
- first_name: Rupak
  full_name: Majumdar, Rupak
  last_name: Majumdar
- first_name: Viktor
  full_name: Kunčak, Viktor
  last_name: Kunčak
external_id:
  arxiv:
  - '1705.00314'
  isi:
  - '000432196400006'
intvolume: '     10426'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1705.00314
month: '01'
oa: 1
oa_version: Submitted Version
page: 118 - 139
project:
- _id: 25892FC0-B435-11E9-9278-68D0E5697425
  grant_number: ICT15-003
  name: Efficient Algorithms for Computer Aided Verification
- _id: 25863FF4-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11407
  name: Game Theory
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
publication_identifier:
  isbn:
  - 978-331963386-2
publication_status: published
publisher: Springer
publist_id: '7166'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Automated recurrence analysis for almost linear expected runtime bounds
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 10426
year: '2017'
...
---
_id: '629'
abstract:
- lang: eng
  text: Even simple cells like bacteria have precisely regulated cellular anatomies,
    which allow them to grow, divide and to respond to internal or external cues with
    high fidelity. How spatial and temporal intracellular organization in prokaryotic
    cells is achieved and maintained on the basis of locally interacting proteins
    still remains largely a mystery. Bulk biochemical assays with purified components
    and in vivo experiments help us to approach key cellular processes from two opposite
    ends, in terms of minimal and maximal complexity. However, to understand how cellular
    phenomena emerge, that are more than the sum of their parts, we have to assemble
    cellular subsystems step by step from the bottom up. Here, we review recent in
    vitro reconstitution experiments with proteins of the bacterial cell division
    machinery and illustrate how they help to shed light on fundamental cellular mechanisms
    that constitute spatiotemporal order and regulate cell division.
author:
- first_name: Martin
  full_name: Loose, Martin
  id: 462D4284-F248-11E8-B48F-1D18A9856A87
  last_name: Loose
  orcid: 0000-0001-7309-9724
- first_name: Katja
  full_name: Zieske, Katja
  last_name: Zieske
- first_name: Petra
  full_name: Schwille, Petra
  last_name: Schwille
citation:
  ama: 'Loose M, Zieske K, Schwille P. Reconstitution of protein dynamics involved
    in bacterial cell division. In: <i>Prokaryotic Cytoskeletons</i>. Vol 84. Sub-Cellular
    Biochemistry. Springer; 2017:419-444. doi:<a href="https://doi.org/10.1007/978-3-319-53047-5_15">10.1007/978-3-319-53047-5_15</a>'
  apa: Loose, M., Zieske, K., &#38; Schwille, P. (2017). Reconstitution of protein
    dynamics involved in bacterial cell division. In <i>Prokaryotic Cytoskeletons</i>
    (Vol. 84, pp. 419–444). Springer. <a href="https://doi.org/10.1007/978-3-319-53047-5_15">https://doi.org/10.1007/978-3-319-53047-5_15</a>
  chicago: Loose, Martin, Katja Zieske, and Petra Schwille. “Reconstitution of Protein
    Dynamics Involved in Bacterial Cell Division.” In <i>Prokaryotic Cytoskeletons</i>,
    84:419–44. Sub-Cellular Biochemistry. Springer, 2017. <a href="https://doi.org/10.1007/978-3-319-53047-5_15">https://doi.org/10.1007/978-3-319-53047-5_15</a>.
  ieee: M. Loose, K. Zieske, and P. Schwille, “Reconstitution of protein dynamics
    involved in bacterial cell division,” in <i>Prokaryotic Cytoskeletons</i>, vol.
    84, Springer, 2017, pp. 419–444.
  ista: 'Loose M, Zieske K, Schwille P. 2017.Reconstitution of protein dynamics involved
    in bacterial cell division. In: Prokaryotic Cytoskeletons. vol. 84, 419–444.'
  mla: Loose, Martin, et al. “Reconstitution of Protein Dynamics Involved in Bacterial
    Cell Division.” <i>Prokaryotic Cytoskeletons</i>, vol. 84, Springer, 2017, pp.
    419–44, doi:<a href="https://doi.org/10.1007/978-3-319-53047-5_15">10.1007/978-3-319-53047-5_15</a>.
  short: M. Loose, K. Zieske, P. Schwille, in:, Prokaryotic Cytoskeletons, Springer,
    2017, pp. 419–444.
corr_author: '1'
date_created: 2018-12-11T11:47:35Z
date_published: 2017-05-13T00:00:00Z
date_updated: 2024-10-09T20:58:00Z
day: '13'
department:
- _id: MaLo
doi: 10.1007/978-3-319-53047-5_15
external_id:
  pmid:
  - '28500535'
intvolume: '        84'
language:
- iso: eng
month: '05'
oa_version: None
page: 419 - 444
pmid: 1
publication: Prokaryotic Cytoskeletons
publication_identifier:
  eisbn:
  - 978-3-319-53047-5
publication_status: published
publisher: Springer
publist_id: '7165'
quality_controlled: '1'
scopus_import: 1
series_title: Sub-Cellular Biochemistry
status: public
title: Reconstitution of protein dynamics involved in bacterial cell division
type: book_chapter
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 84
year: '2017'
...
---
OA_place: publisher
_id: '6291'
abstract:
- lang: eng
  text: Bacteria and their pathogens – phages – are the most abundant living entities
    on Earth. Throughout their coevolution, bacteria have evolved multiple immune
    systems to overcome the ubiquitous threat from the phages. Although the molecu-
    lar details of these immune systems’ functions are relatively well understood,
    their epidemiological consequences for the phage-bacterial communities have been
    largely neglected. In this thesis we employed both experimental and theoretical
    methods to explore whether herd and social immunity may arise in bacterial popu-
    lations. Using our experimental system consisting of Escherichia coli strains
    with a CRISPR based immunity to the T7 phage we show that herd immunity arises
    in phage-bacterial communities and that it is accentuated when the populations
    are spatially structured. By fitting a mathematical model, we inferred expressions
    for the herd immunity threshold and the velocity of spread of a phage epidemic
    in partially resistant bacterial populations, which both depend on the bacterial
    growth rate, phage burst size and phage latent period. We also investigated the
    poten- tial for social immunity in Streptococcus thermophilus and its phage 2972
    using a bioinformatic analysis of potentially coding short open reading frames
    with a signalling signature, encoded within the CRISPR associated genes. Subsequently,
    we tested one identified potentially signalling peptide and found that its addition
    to a phage-challenged culture increases probability of survival of bacteria two
    fold, although the results were only marginally significant. Together, these results
    demonstrate that the ubiquitous arms races between bacteria and phages have further
    consequences at the level of the population.
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Pavel
  full_name: Payne, Pavel
  id: 35F78294-F248-11E8-B48F-1D18A9856A87
  last_name: Payne
  orcid: 0000-0002-2711-9453
citation:
  ama: Payne P. Bacterial herd and social immunity to phages. 2017.
  apa: Payne, P. (2017). <i>Bacterial herd and social immunity to phages</i>. Institute
    of Science and Technology Austria.
  chicago: Payne, Pavel. “Bacterial Herd and Social Immunity to Phages.” Institute
    of Science and Technology Austria, 2017.
  ieee: P. Payne, “Bacterial herd and social immunity to phages,” Institute of Science
    and Technology Austria, 2017.
  ista: Payne P. 2017. Bacterial herd and social immunity to phages. Institute of
    Science and Technology Austria.
  mla: Payne, Pavel. <i>Bacterial Herd and Social Immunity to Phages</i>. Institute
    of Science and Technology Austria, 2017.
  short: P. Payne, Bacterial Herd and Social Immunity to Phages, Institute of Science
    and Technology Austria, 2017.
corr_author: '1'
date_created: 2019-04-09T15:16:45Z
date_published: 2017-02-01T00:00:00Z
date_updated: 2026-04-08T14:16:28Z
day: '01'
ddc:
- '570'
degree_awarded: PhD
department:
- _id: NiBa
- _id: JoBo
file:
- access_level: closed
  checksum: a0fc5c26a89c0ea759947ffba87d0d8f
  content_type: application/pdf
  creator: dernst
  date_created: 2019-04-09T15:15:32Z
  date_updated: 2020-07-14T12:47:27Z
  file_id: '6292'
  file_name: thesis_pavel_payne_final_w_signature_page.pdf
  file_size: 3025175
  relation: main_file
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  checksum: af531e921a7f64a9e0af4cd8783b2226
  content_type: application/pdf
  creator: dernst
  date_created: 2021-02-22T13:45:59Z
  date_updated: 2021-02-22T13:45:59Z
  file_id: '9187'
  file_name: 2017_Payne_Thesis.pdf
  file_size: 3111536
  relation: main_file
  success: 1
file_date_updated: 2021-02-22T13:45:59Z
has_accepted_license: '1'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: '83'
publication_identifier:
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
status: public
supervisor:
- first_name: Jonathan P
  full_name: Bollback, Jonathan P
  id: 2C6FA9CC-F248-11E8-B48F-1D18A9856A87
  last_name: Bollback
  orcid: 0000-0002-4624-4612
- first_name: Nicholas H
  full_name: Barton, Nicholas H
  id: 4880FE40-F248-11E8-B48F-1D18A9856A87
  last_name: Barton
  orcid: 0000-0002-8548-5240
title: Bacterial herd and social immunity to phages
type: dissertation
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2017'
...
---
_id: '630'
abstract:
- lang: eng
  text: 'Background: Standards have become available to share semantically encoded
    vital parameters from medical devices, as required for example by personal healthcare
    records. Standardised sharing of biosignal data largely remains open. Objectives:
    The goal of this work is to explore available biosignal file format and data exchange
    standards and profiles, and to conceptualise end-To-end solutions. Methods: The
    authors reviewed and discussed available biosignal file format standards with
    other members of international standards development organisations (SDOs). Results:
    A raw concept for standards based acquisition, storage, archiving and sharing
    of biosignals was developed. The GDF format may serve for storing biosignals.
    Signals can then be shared using FHIR resources and may be stored on FHIR servers
    or in DICOM archives, with DICOM waveforms as one possible format. Conclusion:
    Currently a group of international SDOs (e.g. HL7, IHE, DICOM, IEEE) is engaged
    in intensive discussions. This discussion extends existing work that already was
    adopted by large implementer communities. The concept presented here only reports
    the current status of the discussion in Austria. The discussion will continue
    internationally, with results to be expected over the coming years.'
alternative_title:
- Studies in Health Technology and Informatics
article_processing_charge: No
author:
- first_name: Stefan
  full_name: Sauermann, Stefan
  last_name: Sauermann
- first_name: Veronika
  full_name: David, Veronika
  last_name: David
- first_name: Alois
  full_name: Schlögl, Alois
  id: 45BF87EE-F248-11E8-B48F-1D18A9856A87
  last_name: Schlögl
  orcid: 0000-0002-5621-8100
- first_name: Reinhard
  full_name: Egelkraut, Reinhard
  last_name: Egelkraut
- first_name: Matthias
  full_name: Frohner, Matthias
  last_name: Frohner
- first_name: Birgit
  full_name: Pohn, Birgit
  last_name: Pohn
- first_name: Philipp
  full_name: Urbauer, Philipp
  last_name: Urbauer
- first_name: Alexander
  full_name: Mense, Alexander
  last_name: Mense
citation:
  ama: 'Sauermann S, David V, Schlögl A, et al. Biosignals standards and FHIR: The
    way to go. In: Vol 236. IOS Press; 2017:356-362. doi:<a href="https://doi.org/10.3233/978-1-61499-759-7-356">10.3233/978-1-61499-759-7-356</a>'
  apa: 'Sauermann, S., David, V., Schlögl, A., Egelkraut, R., Frohner, M., Pohn, B.,
    … Mense, A. (2017). Biosignals standards and FHIR: The way to go (Vol. 236, pp.
    356–362). Presented at the eHealth: Health Informatics Meets eHealth, Vienna,
    Austria: IOS Press. <a href="https://doi.org/10.3233/978-1-61499-759-7-356">https://doi.org/10.3233/978-1-61499-759-7-356</a>'
  chicago: 'Sauermann, Stefan, Veronika David, Alois Schlögl, Reinhard Egelkraut,
    Matthias Frohner, Birgit Pohn, Philipp Urbauer, and Alexander Mense. “Biosignals
    Standards and FHIR: The Way to Go,” 236:356–62. IOS Press, 2017. <a href="https://doi.org/10.3233/978-1-61499-759-7-356">https://doi.org/10.3233/978-1-61499-759-7-356</a>.'
  ieee: 'S. Sauermann <i>et al.</i>, “Biosignals standards and FHIR: The way to go,”
    presented at the eHealth: Health Informatics Meets eHealth, Vienna, Austria, 2017,
    vol. 236, pp. 356–362.'
  ista: 'Sauermann S, David V, Schlögl A, Egelkraut R, Frohner M, Pohn B, Urbauer
    P, Mense A. 2017. Biosignals standards and FHIR: The way to go. eHealth: Health
    Informatics Meets eHealth, Studies in Health Technology and Informatics, vol.
    236, 356–362.'
  mla: 'Sauermann, Stefan, et al. <i>Biosignals Standards and FHIR: The Way to Go</i>.
    Vol. 236, IOS Press, 2017, pp. 356–62, doi:<a href="https://doi.org/10.3233/978-1-61499-759-7-356">10.3233/978-1-61499-759-7-356</a>.'
  short: S. Sauermann, V. David, A. Schlögl, R. Egelkraut, M. Frohner, B. Pohn, P.
    Urbauer, A. Mense, in:, IOS Press, 2017, pp. 356–362.
conference:
  end_date: 2017-05-24
  location: Vienna, Austria
  name: 'eHealth: Health Informatics Meets eHealth'
  start_date: 2017-05-23
date_created: 2018-12-11T11:47:36Z
date_published: 2017-01-01T00:00:00Z
date_updated: 2025-09-11T07:27:53Z
day: '01'
ddc:
- '005'
department:
- _id: ScienComp
- _id: PeJo
doi: 10.3233/978-1-61499-759-7-356
external_id:
  isi:
  - '000426828000047'
file:
- access_level: open_access
  checksum: 1254dcc5b04a996d97fad9a726b42727
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:11:56Z
  date_updated: 2020-07-14T12:47:27Z
  file_id: '4913'
  file_name: IST-2017-906-v1+1_SHTI236-0356.pdf
  file_size: 443635
  relation: main_file
file_date_updated: 2020-07-14T12:47:27Z
has_accepted_license: '1'
intvolume: '       236'
isi: 1
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
page: 356 - 362
publication_identifier:
  isbn:
  - 978-161499758-0
publication_status: published
publisher: IOS Press
publist_id: '7164'
pubrep_id: '906'
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Biosignals standards and FHIR: The way to go'
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 236
year: '2017'
...
---
_id: '631'
abstract:
- lang: eng
  text: Template polyhedra generalize intervals and octagons to polyhedra whose facets
    are orthogonal to a given set of arbitrary directions. They have been employed
    in the abstract interpretation of programs and, with particular success, in the
    reachability analysis of hybrid automata. While previously, the choice of directions
    has been left to the user or a heuristic, we present a method for the automatic
    discovery of directions that generalize and eliminate spurious counterexamples.
    We show that for the class of convex hybrid automata, i.e., hybrid automata with
    (possibly nonlinear) convex constraints on derivatives, such directions always
    exist and can be found using convex optimization. We embed our method inside a
    CEGAR loop, thus enabling the time-unbounded reachability analysis of an important
    and richer class of hybrid automata than was previously possible. We evaluate
    our method on several benchmarks, demonstrating also its superior efficiency for
    the special case of linear hybrid automata.
acknowledgement: This research was supported in part by the Austrian Science Fund
  (FWF) under grants S11402-N23 (RiSE/SHiNE) and Z211-N23 (Wittgenstein Award), by
  the European Commission under grant 643921 (UnCoVerCPS), and by the ARC project
  DP140104219 (Robust AI Planning for Hybrid Systems).
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Sergiy
  full_name: Bogomolov, Sergiy
  id: 369D9A44-F248-11E8-B48F-1D18A9856A87
  last_name: Bogomolov
  orcid: 0000-0002-0686-0365
- first_name: Goran
  full_name: Frehse, Goran
  last_name: Frehse
- first_name: Mirco
  full_name: Giacobbe, Mirco
  id: 3444EA5E-F248-11E8-B48F-1D18A9856A87
  last_name: Giacobbe
  orcid: 0000-0001-8180-0904
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
citation:
  ama: 'Bogomolov S, Frehse G, Giacobbe M, Henzinger TA. Counterexample guided refinement
    of template polyhedra. In: Vol 10205. Springer; 2017:589-606. doi:<a href="https://doi.org/10.1007/978-3-662-54577-5_34">10.1007/978-3-662-54577-5_34</a>'
  apa: 'Bogomolov, S., Frehse, G., Giacobbe, M., &#38; Henzinger, T. A. (2017). Counterexample
    guided refinement of template polyhedra (Vol. 10205, pp. 589–606). Presented at
    the TACAS: Tools and Algorithms for the Construction and Analysis of Systems,
    Uppsala, Sweden: Springer. <a href="https://doi.org/10.1007/978-3-662-54577-5_34">https://doi.org/10.1007/978-3-662-54577-5_34</a>'
  chicago: Bogomolov, Sergiy, Goran Frehse, Mirco Giacobbe, and Thomas A Henzinger.
    “Counterexample Guided Refinement of Template Polyhedra,” 10205:589–606. Springer,
    2017. <a href="https://doi.org/10.1007/978-3-662-54577-5_34">https://doi.org/10.1007/978-3-662-54577-5_34</a>.
  ieee: 'S. Bogomolov, G. Frehse, M. Giacobbe, and T. A. Henzinger, “Counterexample
    guided refinement of template polyhedra,” presented at the TACAS: Tools and Algorithms
    for the Construction and Analysis of Systems, Uppsala, Sweden, 2017, vol. 10205,
    pp. 589–606.'
  ista: 'Bogomolov S, Frehse G, Giacobbe M, Henzinger TA. 2017. Counterexample guided
    refinement of template polyhedra. TACAS: Tools and Algorithms for the Construction
    and Analysis of Systems, LNCS, vol. 10205, 589–606.'
  mla: Bogomolov, Sergiy, et al. <i>Counterexample Guided Refinement of Template Polyhedra</i>.
    Vol. 10205, Springer, 2017, pp. 589–606, doi:<a href="https://doi.org/10.1007/978-3-662-54577-5_34">10.1007/978-3-662-54577-5_34</a>.
  short: S. Bogomolov, G. Frehse, M. Giacobbe, T.A. Henzinger, in:, Springer, 2017,
    pp. 589–606.
conference:
  end_date: 2017-04-29
  location: Uppsala, Sweden
  name: 'TACAS: Tools and Algorithms for the Construction and Analysis of Systems'
  start_date: 2017-04-22
corr_author: '1'
date_created: 2018-12-11T11:47:36Z
date_published: 2017-03-31T00:00:00Z
date_updated: 2026-04-08T07:47:13Z
day: '31'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.1007/978-3-662-54577-5_34
external_id:
  isi:
  - '000440734900034'
file:
- access_level: open_access
  checksum: f395d0d20102b89aeaad8b4ef4f18f4f
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:11:41Z
  date_updated: 2020-07-14T12:47:27Z
  file_id: '4897'
  file_name: IST-2017-741-v1+1_main.pdf
  file_size: 569863
  relation: main_file
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  checksum: f416ee1ae4497b23ecdf28b1f18bb8df
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:11:42Z
  date_updated: 2020-07-14T12:47:27Z
  file_id: '4898'
  file_name: IST-2018-741-v2+2_main.pdf
  file_size: 563276
  relation: main_file
file_date_updated: 2020-07-14T12:47:27Z
has_accepted_license: '1'
intvolume: '     10205'
isi: 1
language:
- iso: eng
month: '03'
oa: 1
oa_version: Submitted Version
page: 589 - 606
project:
- _id: 25F5A88A-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11402-N23
  name: Moderne Concurrency Paradigms
- _id: 25F42A32-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: Z211
  name: Formal methods for the design and analysis of complex systems
publication_identifier:
  isbn:
  - 978-366254576-8
publication_status: published
publisher: Springer
publist_id: '7162'
pubrep_id: '966'
quality_controlled: '1'
related_material:
  record:
  - id: '6894'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Counterexample guided refinement of template polyhedra
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 10205
year: '2017'
...
---
_id: '632'
abstract:
- lang: eng
  text: 'We consider a 2D quantum system of N bosons in a trapping potential |x|s,
    interacting via a pair potential of the form N2β−1 w(Nβ x). We show that for all
    0 &lt; β &lt; (s + 1)/(s + 2), the leading order behavior of ground states of
    the many-body system is described in the large N limit by the corresponding cubic
    nonlinear Schrödinger energy functional. Our result covers the focusing case (w
    &lt; 0) where even the stability of the many-body system is not obvious. This
    answers an open question mentioned by X. Chen and J. Holmer for harmonic traps
    (s = 2). Together with the BBGKY hierarchy approach used by these authors, our
    result implies the convergence of the many-body quantum dynamics to the focusing
    NLS equation with harmonic trap for all 0 &lt; β &lt; 3/4. '
article_processing_charge: No
arxiv: 1
author:
- first_name: Mathieu
  full_name: Lewin, Mathieu
  last_name: Lewin
- first_name: Phan
  full_name: Nam, Phan
  id: 404092F4-F248-11E8-B48F-1D18A9856A87
  last_name: Nam
- first_name: Nicolas
  full_name: Rougerie, Nicolas
  last_name: Rougerie
citation:
  ama: Lewin M, Nam P, Rougerie N. A note on 2D focusing many boson systems. <i>Proceedings
    of the American Mathematical Society</i>. 2017;145(6):2441-2454. doi:<a href="https://doi.org/10.1090/proc/13468">10.1090/proc/13468</a>
  apa: Lewin, M., Nam, P., &#38; Rougerie, N. (2017). A note on 2D focusing many boson
    systems. <i>Proceedings of the American Mathematical Society</i>. American Mathematical
    Society. <a href="https://doi.org/10.1090/proc/13468">https://doi.org/10.1090/proc/13468</a>
  chicago: Lewin, Mathieu, Phan Nam, and Nicolas Rougerie. “A Note on 2D Focusing
    Many Boson Systems.” <i>Proceedings of the American Mathematical Society</i>.
    American Mathematical Society, 2017. <a href="https://doi.org/10.1090/proc/13468">https://doi.org/10.1090/proc/13468</a>.
  ieee: M. Lewin, P. Nam, and N. Rougerie, “A note on 2D focusing many boson systems,”
    <i>Proceedings of the American Mathematical Society</i>, vol. 145, no. 6. American
    Mathematical Society, pp. 2441–2454, 2017.
  ista: Lewin M, Nam P, Rougerie N. 2017. A note on 2D focusing many boson systems.
    Proceedings of the American Mathematical Society. 145(6), 2441–2454.
  mla: Lewin, Mathieu, et al. “A Note on 2D Focusing Many Boson Systems.” <i>Proceedings
    of the American Mathematical Society</i>, vol. 145, no. 6, American Mathematical
    Society, 2017, pp. 2441–54, doi:<a href="https://doi.org/10.1090/proc/13468">10.1090/proc/13468</a>.
  short: M. Lewin, P. Nam, N. Rougerie, Proceedings of the American Mathematical Society
    145 (2017) 2441–2454.
corr_author: '1'
date_created: 2018-12-11T11:47:36Z
date_published: 2017-01-01T00:00:00Z
date_updated: 2025-09-11T07:26:38Z
day: '01'
department:
- _id: RoSe
doi: 10.1090/proc/13468
ec_funded: 1
external_id:
  arxiv:
  - '1509.09045'
  isi:
  - '000398833500014'
intvolume: '       145'
isi: 1
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1509.09045
month: '01'
oa: 1
oa_version: Submitted Version
page: 2441 - 2454
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
publication: Proceedings of the American Mathematical Society
publication_status: published
publisher: American Mathematical Society
publist_id: '7160'
quality_controlled: '1'
scopus_import: '1'
status: public
title: A note on 2D focusing many boson systems
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 145
year: '2017'
...
---
_id: '633'
abstract:
- lang: eng
  text: A Rapidly-exploring Random Tree (RRT) is an algorithm which can search a non-convex
    region of space by incrementally building a space-filling tree. The tree is constructed
    from random points drawn from system’s state space and is biased to grow towards
    large unexplored areas in the system. RRT can provide better coverage of a system’s
    possible behaviors compared with random simulations, but is more lightweight than
    full reachability analysis. In this paper, we explore some of the design decisions
    encountered while implementing a hybrid extension of the RRT algorithm, which
    have not been elaborated on before. In particular, we focus on handling non-determinism,
    which arises due to discrete transitions. We introduce the notion of important
    points to account for this phenomena. We showcase our ideas using heater and navigation
    benchmarks.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Stanley
  full_name: Bak, Stanley
  last_name: Bak
- first_name: Sergiy
  full_name: Bogomolov, Sergiy
  id: 369D9A44-F248-11E8-B48F-1D18A9856A87
  last_name: Bogomolov
  orcid: 0000-0002-0686-0365
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Aviral
  full_name: Kumar, Aviral
  last_name: Kumar
citation:
  ama: 'Bak S, Bogomolov S, Henzinger TA, Kumar A. Challenges and tool implementation
    of hybrid rapidly exploring random trees. In: Abate A, Bodo S, eds. Vol 10381.
    Springer; 2017:83-89. doi:<a href="https://doi.org/10.1007/978-3-319-63501-9_6">10.1007/978-3-319-63501-9_6</a>'
  apa: 'Bak, S., Bogomolov, S., Henzinger, T. A., &#38; Kumar, A. (2017). Challenges
    and tool implementation of hybrid rapidly exploring random trees. In A. Abate
    &#38; S. Bodo (Eds.) (Vol. 10381, pp. 83–89). Presented at the NSV: Numerical
    Software Verification, Heidelberg, Germany: Springer. <a href="https://doi.org/10.1007/978-3-319-63501-9_6">https://doi.org/10.1007/978-3-319-63501-9_6</a>'
  chicago: Bak, Stanley, Sergiy Bogomolov, Thomas A Henzinger, and Aviral Kumar. “Challenges
    and Tool Implementation of Hybrid Rapidly Exploring Random Trees.” edited by Alessandro
    Abate and Sylvie Bodo, 10381:83–89. Springer, 2017. <a href="https://doi.org/10.1007/978-3-319-63501-9_6">https://doi.org/10.1007/978-3-319-63501-9_6</a>.
  ieee: 'S. Bak, S. Bogomolov, T. A. Henzinger, and A. Kumar, “Challenges and tool
    implementation of hybrid rapidly exploring random trees,” presented at the NSV:
    Numerical Software Verification, Heidelberg, Germany, 2017, vol. 10381, pp. 83–89.'
  ista: 'Bak S, Bogomolov S, Henzinger TA, Kumar A. 2017. Challenges and tool implementation
    of hybrid rapidly exploring random trees. NSV: Numerical Software Verification,
    LNCS, vol. 10381, 83–89.'
  mla: Bak, Stanley, et al. <i>Challenges and Tool Implementation of Hybrid Rapidly
    Exploring Random Trees</i>. Edited by Alessandro Abate and Sylvie Bodo, vol. 10381,
    Springer, 2017, pp. 83–89, doi:<a href="https://doi.org/10.1007/978-3-319-63501-9_6">10.1007/978-3-319-63501-9_6</a>.
  short: S. Bak, S. Bogomolov, T.A. Henzinger, A. Kumar, in:, A. Abate, S. Bodo (Eds.),
    Springer, 2017, pp. 83–89.
conference:
  end_date: 2017-07-23
  location: Heidelberg, Germany
  name: 'NSV: Numerical Software Verification'
  start_date: 2017-07-22
date_created: 2018-12-11T11:47:37Z
date_published: 2017-01-01T00:00:00Z
date_updated: 2025-09-11T07:25:57Z
day: '01'
department:
- _id: ToHe
doi: 10.1007/978-3-319-63501-9_6
editor:
- first_name: Alessandro
  full_name: Abate, Alessandro
  last_name: Abate
- first_name: Sylvie
  full_name: Bodo, Sylvie
  last_name: Bodo
external_id:
  isi:
  - '000440724800006'
intvolume: '     10381'
isi: 1
language:
- iso: eng
month: '01'
oa_version: None
page: 83 - 89
project:
- _id: 25F5A88A-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11402-N23
  name: Moderne Concurrency Paradigms
- _id: 25F42A32-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: Z211
  name: Formal methods for the design and analysis of complex systems
publication_identifier:
  isbn:
  - 978-331963500-2
publication_status: published
publisher: Springer
publist_id: '7159'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Challenges and tool implementation of hybrid rapidly exploring random trees
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 10381
year: '2017'
...
---
_id: '634'
abstract:
- lang: eng
  text: As autism spectrum disorder (ASD) is largely regarded as a neurodevelopmental
    condition, long-time consensus was that its hallmark features are irreversible.
    However, several studies from recent years using defined mouse models of ASD have
    provided clear evidence that in mice neurobiological and behavioural alterations
    can be ameliorated or even reversed by genetic restoration or pharmacological
    treatment either before or after symptom onset. Here, we review findings on genetic
    and pharmacological reversibility of phenotypes in mouse models of ASD. Our review
    should give a comprehensive overview on both aspects and encourage future studies
    to better understand the underlying molecular mechanisms that might be translatable
    from animals to humans.
alternative_title:
- ADVSANAT
article_processing_charge: No
author:
- first_name: Jan
  full_name: Schroeder, Jan
  last_name: Schroeder
- first_name: Elena
  full_name: Deliu, Elena
  id: 37A40D7E-F248-11E8-B48F-1D18A9856A87
  last_name: Deliu
  orcid: 0000-0002-7370-5293
- first_name: Gaia
  full_name: Novarino, Gaia
  id: 3E57A680-F248-11E8-B48F-1D18A9856A87
  last_name: Novarino
  orcid: 0000-0002-7673-7178
- first_name: Michael
  full_name: Schmeisser, Michael
  last_name: Schmeisser
citation:
  ama: 'Schroeder J, Deliu E, Novarino G, Schmeisser M. Genetic and pharmacological
    reversibility of phenotypes in mouse models of autism spectrum disorder. In: Schmeisser
    M, Boekers T, eds. <i>Translational Anatomy and Cell Biology of Autism Spectrum
    Disorder</i>. Vol 224. Advances in Anatomy Embryology and Cell Biology. Springer;
    2017:189-211. doi:<a href="https://doi.org/10.1007/978-3-319-52498-6_10">10.1007/978-3-319-52498-6_10</a>'
  apa: Schroeder, J., Deliu, E., Novarino, G., &#38; Schmeisser, M. (2017). Genetic
    and pharmacological reversibility of phenotypes in mouse models of autism spectrum
    disorder. In M. Schmeisser &#38; T. Boekers (Eds.), <i>Translational Anatomy and
    Cell Biology of Autism Spectrum Disorder</i> (Vol. 224, pp. 189–211). Springer.
    <a href="https://doi.org/10.1007/978-3-319-52498-6_10">https://doi.org/10.1007/978-3-319-52498-6_10</a>
  chicago: Schroeder, Jan, Elena Deliu, Gaia Novarino, and Michael Schmeisser. “Genetic
    and Pharmacological Reversibility of Phenotypes in Mouse Models of Autism Spectrum
    Disorder.” In <i>Translational Anatomy and Cell Biology of Autism Spectrum Disorder</i>,
    edited by Michael Schmeisser and Tobias Boekers, 224:189–211. Advances in Anatomy
    Embryology and Cell Biology. Springer, 2017. <a href="https://doi.org/10.1007/978-3-319-52498-6_10">https://doi.org/10.1007/978-3-319-52498-6_10</a>.
  ieee: J. Schroeder, E. Deliu, G. Novarino, and M. Schmeisser, “Genetic and pharmacological
    reversibility of phenotypes in mouse models of autism spectrum disorder,” in <i>Translational
    Anatomy and Cell Biology of Autism Spectrum Disorder</i>, vol. 224, M. Schmeisser
    and T. Boekers, Eds. Springer, 2017, pp. 189–211.
  ista: 'Schroeder J, Deliu E, Novarino G, Schmeisser M. 2017.Genetic and pharmacological
    reversibility of phenotypes in mouse models of autism spectrum disorder. In: Translational
    Anatomy and Cell Biology of Autism Spectrum Disorder. ADVSANAT, vol. 224, 189–211.'
  mla: Schroeder, Jan, et al. “Genetic and Pharmacological Reversibility of Phenotypes
    in Mouse Models of Autism Spectrum Disorder.” <i>Translational Anatomy and Cell
    Biology of Autism Spectrum Disorder</i>, edited by Michael Schmeisser and Tobias
    Boekers, vol. 224, Springer, 2017, pp. 189–211, doi:<a href="https://doi.org/10.1007/978-3-319-52498-6_10">10.1007/978-3-319-52498-6_10</a>.
  short: J. Schroeder, E. Deliu, G. Novarino, M. Schmeisser, in:, M. Schmeisser, T.
    Boekers (Eds.), Translational Anatomy and Cell Biology of Autism Spectrum Disorder,
    Springer, 2017, pp. 189–211.
corr_author: '1'
date_created: 2018-12-11T11:47:37Z
date_published: 2017-05-28T00:00:00Z
date_updated: 2025-09-11T07:25:25Z
day: '28'
department:
- _id: GaNo
doi: 10.1007/978-3-319-52498-6_10
editor:
- first_name: Michael
  full_name: Schmeisser, Michael
  last_name: Schmeisser
- first_name: Tobias
  full_name: Boekers, Tobias
  last_name: Boekers
external_id:
  isi:
  - '000443802500011'
intvolume: '       224'
isi: 1
language:
- iso: eng
month: '05'
oa_version: None
page: 189 - 211
project:
- _id: 25473368-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: F03523
  name: Transmembrane Transporters in Health and Disease
publication: Translational Anatomy and Cell Biology of Autism Spectrum Disorder
publication_identifier:
  eisbn:
  - 978-3-319-52498-6
publication_status: published
publisher: Springer
publist_id: '7156'
quality_controlled: '1'
scopus_import: '1'
series_title: Advances in Anatomy Embryology and Cell Biology
status: public
title: Genetic and pharmacological reversibility of phenotypes in mouse models of
  autism spectrum disorder
type: book_chapter
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 224
year: '2017'
...
---
_id: '635'
abstract:
- lang: eng
  text: Memory-hard functions (MHFs) are hash algorithms whose evaluation cost is
    dominated by memory cost. As memory, unlike computation, costs about the same
    across different platforms, MHFs cannot be evaluated at significantly lower cost
    on dedicated hardware like ASICs. MHFs have found widespread applications including
    password hashing, key derivation, and proofs-of-work. This paper focuses on scrypt,
    a simple candidate MHF designed by Percival, and described in RFC 7914. It has
    been used within a number of cryptocurrencies (e.g., Litecoin and Dogecoin) and
    has been an inspiration for Argon2d, one of the winners of the recent password-hashing
    competition. Despite its popularity, no rigorous lower bounds on its memory complexity
    are known. We prove that scrypt is optimally memory-hard, i.e., its cumulative
    memory complexity (cmc) in the parallel random oracle model is Ω(n2w), where w
    and n are the output length and number of invocations of the underlying hash function,
    respectively. High cmc is a strong security target for MHFs introduced by Alwen
    and Serbinenko (STOC’15) which implies high memory cost even for adversaries who
    can amortize the cost over many evaluations and evaluate the underlying hash functions
    many times in parallel. Our proof is the first showing optimal memory-hardness
    for any MHF. Our result improves both quantitatively and qualitatively upon the
    recent work by Alwen et al. (EUROCRYPT’16) who proved a weaker lower bound of
    Ω(n2w/ log2 n) for a restricted class of adversaries.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Joel F
  full_name: Alwen, Joel F
  id: 2A8DFA8C-F248-11E8-B48F-1D18A9856A87
  last_name: Alwen
- first_name: Binchi
  full_name: Chen, Binchi
  last_name: Chen
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
- first_name: Leonid
  full_name: Reyzin, Leonid
  last_name: Reyzin
- first_name: Stefano
  full_name: Tessaro, Stefano
  last_name: Tessaro
citation:
  ama: 'Alwen JF, Chen B, Pietrzak KZ, Reyzin L, Tessaro S. Scrypt is maximally memory
    hard. In: Coron J-S, Buus Nielsen J, eds. Vol 10212. Springer; 2017:33-62. doi:<a
    href="https://doi.org/10.1007/978-3-319-56617-7_2">10.1007/978-3-319-56617-7_2</a>'
  apa: 'Alwen, J. F., Chen, B., Pietrzak, K. Z., Reyzin, L., &#38; Tessaro, S. (2017).
    Scrypt is maximally memory hard. In J.-S. Coron &#38; J. Buus Nielsen (Eds.) (Vol.
    10212, pp. 33–62). Presented at the EUROCRYPT: Theory and Applications of Cryptographic
    Techniques, Paris, France: Springer. <a href="https://doi.org/10.1007/978-3-319-56617-7_2">https://doi.org/10.1007/978-3-319-56617-7_2</a>'
  chicago: Alwen, Joel F, Binchi Chen, Krzysztof Z Pietrzak, Leonid Reyzin, and Stefano
    Tessaro. “Scrypt Is Maximally Memory Hard.” edited by Jean-Sébastien Coron and
    Jesper Buus Nielsen, 10212:33–62. Springer, 2017. <a href="https://doi.org/10.1007/978-3-319-56617-7_2">https://doi.org/10.1007/978-3-319-56617-7_2</a>.
  ieee: 'J. F. Alwen, B. Chen, K. Z. Pietrzak, L. Reyzin, and S. Tessaro, “Scrypt
    is maximally memory hard,” presented at the EUROCRYPT: Theory and Applications
    of Cryptographic Techniques, Paris, France, 2017, vol. 10212, pp. 33–62.'
  ista: 'Alwen JF, Chen B, Pietrzak KZ, Reyzin L, Tessaro S. 2017. Scrypt is maximally
    memory hard. EUROCRYPT: Theory and Applications of Cryptographic Techniques, LNCS,
    vol. 10212, 33–62.'
  mla: Alwen, Joel F., et al. <i>Scrypt Is Maximally Memory Hard</i>. Edited by Jean-Sébastien
    Coron and Jesper Buus Nielsen, vol. 10212, Springer, 2017, pp. 33–62, doi:<a href="https://doi.org/10.1007/978-3-319-56617-7_2">10.1007/978-3-319-56617-7_2</a>.
  short: J.F. Alwen, B. Chen, K.Z. Pietrzak, L. Reyzin, S. Tessaro, in:, J.-S. Coron,
    J. Buus Nielsen (Eds.), Springer, 2017, pp. 33–62.
conference:
  end_date: 2017-05-04
  location: Paris, France
  name: 'EUROCRYPT: Theory and Applications of Cryptographic Techniques'
  start_date: 2017-04-30
date_created: 2018-12-11T11:47:37Z
date_published: 2017-01-01T00:00:00Z
date_updated: 2025-09-11T07:24:51Z
day: '01'
department:
- _id: KrPi
doi: 10.1007/978-3-319-56617-7_2
ec_funded: 1
editor:
- first_name: Jean-Sébastien
  full_name: Coron, Jean-Sébastien
  last_name: Coron
- first_name: Jesper
  full_name: Buus Nielsen, Jesper
  last_name: Buus Nielsen
external_id:
  isi:
  - '000419175900002'
intvolume: '     10212'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://eprint.iacr.org/2016/989
month: '01'
oa: 1
oa_version: Submitted Version
page: 33 - 62
project:
- _id: 258AA5B2-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '682815'
  name: Teaching Old Crypto New Tricks
publication_identifier:
  isbn:
  - 978-331956616-0
publication_status: published
publisher: Springer
publist_id: '7154'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Scrypt is maximally memory hard
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 10212
year: '2017'
...
---
_id: '636'
abstract:
- lang: eng
  text: Signal regular expressions can specify sequential properties of real-valued
    signals based on threshold conditions, regular operations, and duration constraints.
    In this paper we endow them with a quantitative semantics which indicates how
    robustly a signal matches or does not match a given expression. First, we show
    that this semantics is a safe approximation of a distance between the signal and
    the language defined by the expression. Then, we consider the robust matching
    problem, that is, computing the quantitative semantics of every segment of a given
    signal relative to an expression. We present an algorithm that solves this problem
    for piecewise-constant and piecewise-linear signals and show that for such signals
    the robustness map is a piecewise-linear function. The availability of an indicator
    describing how robustly a signal segment matches some regular pattern provides
    a general framework for quantitative monitoring of cyber-physical systems.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Alexey
  full_name: Bakhirkin, Alexey
  last_name: Bakhirkin
- first_name: Thomas
  full_name: Ferrere, Thomas
  id: 40960E6E-F248-11E8-B48F-1D18A9856A87
  last_name: Ferrere
  orcid: 0000-0001-5199-3143
- first_name: Oded
  full_name: Maler, Oded
  last_name: Maler
- first_name: Dogan
  full_name: Ulus, Dogan
  last_name: Ulus
citation:
  ama: 'Bakhirkin A, Ferrere T, Maler O, Ulus D. On the quantitative semantics of
    regular expressions over real-valued signals. In: Abate A, Geeraerts G, eds. Vol
    10419. Springer; 2017:189-206. doi:<a href="https://doi.org/10.1007/978-3-319-65765-3_11">10.1007/978-3-319-65765-3_11</a>'
  apa: 'Bakhirkin, A., Ferrere, T., Maler, O., &#38; Ulus, D. (2017). On the quantitative
    semantics of regular expressions over real-valued signals. In A. Abate &#38; G.
    Geeraerts (Eds.) (Vol. 10419, pp. 189–206). Presented at the FORMATS: Formal Modelling
    and Analysis of Timed Systems, Berlin, Germany: Springer. <a href="https://doi.org/10.1007/978-3-319-65765-3_11">https://doi.org/10.1007/978-3-319-65765-3_11</a>'
  chicago: Bakhirkin, Alexey, Thomas Ferrere, Oded Maler, and Dogan Ulus. “On the
    Quantitative Semantics of Regular Expressions over Real-Valued Signals.” edited
    by Alessandro Abate and Gilles Geeraerts, 10419:189–206. Springer, 2017. <a href="https://doi.org/10.1007/978-3-319-65765-3_11">https://doi.org/10.1007/978-3-319-65765-3_11</a>.
  ieee: 'A. Bakhirkin, T. Ferrere, O. Maler, and D. Ulus, “On the quantitative semantics
    of regular expressions over real-valued signals,” presented at the FORMATS: Formal
    Modelling and Analysis of Timed Systems, Berlin, Germany, 2017, vol. 10419, pp.
    189–206.'
  ista: 'Bakhirkin A, Ferrere T, Maler O, Ulus D. 2017. On the quantitative semantics
    of regular expressions over real-valued signals. FORMATS: Formal Modelling and
    Analysis of Timed Systems, LNCS, vol. 10419, 189–206.'
  mla: Bakhirkin, Alexey, et al. <i>On the Quantitative Semantics of Regular Expressions
    over Real-Valued Signals</i>. Edited by Alessandro Abate and Gilles Geeraerts,
    vol. 10419, Springer, 2017, pp. 189–206, doi:<a href="https://doi.org/10.1007/978-3-319-65765-3_11">10.1007/978-3-319-65765-3_11</a>.
  short: A. Bakhirkin, T. Ferrere, O. Maler, D. Ulus, in:, A. Abate, G. Geeraerts
    (Eds.), Springer, 2017, pp. 189–206.
conference:
  end_date: 2017-09-07
  location: Berlin, Germany
  name: 'FORMATS: Formal Modelling and Analysis of Timed Systems'
  start_date: 2017-09-05
date_created: 2018-12-11T11:47:38Z
date_published: 2017-08-03T00:00:00Z
date_updated: 2025-09-11T07:24:11Z
day: '03'
department:
- _id: ToHe
doi: 10.1007/978-3-319-65765-3_11
editor:
- first_name: Alessandro
  full_name: Abate, Alessandro
  last_name: Abate
- first_name: Gilles
  full_name: Geeraerts, Gilles
  last_name: Geeraerts
external_id:
  isi:
  - '000611678300011'
intvolume: '     10419'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://hal.archives-ouvertes.fr/hal-01552132
month: '08'
oa: 1
oa_version: Submitted Version
page: 189 - 206
project:
- _id: 25F5A88A-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11402-N23
  name: Moderne Concurrency Paradigms
- _id: 25F42A32-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: Z211
  name: Formal methods for the design and analysis of complex systems
publication_identifier:
  isbn:
  - 978-331965764-6
publication_status: published
publisher: Springer
publist_id: '7152'
quality_controlled: '1'
scopus_import: '1'
status: public
title: On the quantitative semantics of regular expressions over real-valued signals
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 10419
year: '2017'
...
---
_id: '637'
abstract:
- lang: eng
  text: For many cryptographic primitives, it is relatively easy to achieve selective
    security (where the adversary commits a-priori to some of the choices to be made
    later in the attack) but appears difficult to achieve the more natural notion
    of adaptive security (where the adversary can make all choices on the go as the
    attack progresses). A series of several recent works shows how to cleverly achieve
    adaptive security in several such scenarios including generalized selective decryption
    (Panjwani, TCC ’07 and Fuchsbauer et al., CRYPTO ’15), constrained PRFs (Fuchsbauer
    et al., ASIACRYPT ’14), and Yao garbled circuits (Jafargholi and Wichs, TCC ’16b).
    Although the above works expressed vague intuition that they share a common technique,
    the connection was never made precise. In this work we present a new framework
    that connects all of these works and allows us to present them in a unified and
    simplified fashion. Moreover, we use the framework to derive a new result for
    adaptively secure secret sharing over access structures defined via monotone circuits.
    We envision that further applications will follow in the future. Underlying our
    framework is the following simple idea. It is well known that selective security,
    where the adversary commits to n-bits of information about his future choices,
    automatically implies adaptive security at the cost of amplifying the adversary’s
    advantage by a factor of up to 2n. However, in some cases the proof of selective
    security proceeds via a sequence of hybrids, where each pair of adjacent hybrids
    locally only requires some smaller partial information consisting of m ≪ n bits.
    The partial information needed might be completely different between different
    pairs of hybrids, and if we look across all the hybrids we might rely on the entire
    n-bit commitment. Nevertheless, the above is sufficient to prove adaptive security,
    at the cost of amplifying the adversary’s advantage by a factor of only 2m ≪ 2n.
    In all of our examples using the above framework, the different hybrids are captured
    by some sort of a graph pebbling game and the amount of information that the adversary
    needs to commit to in each pair of hybrids is bounded by the maximum number of
    pebbles in play at any point in time. Therefore, coming up with better strategies
    for proving adaptive security translates to various pebbling strategies for different
    types of graphs.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Zahra
  full_name: Jafargholi, Zahra
  last_name: Jafargholi
- first_name: Chethan
  full_name: Kamath Hosdurg, Chethan
  id: 4BD3F30E-F248-11E8-B48F-1D18A9856A87
  last_name: Kamath Hosdurg
  orcid: 0009-0006-6812-7317
- first_name: Karen
  full_name: Klein, Karen
  id: 3E83A2F8-F248-11E8-B48F-1D18A9856A87
  last_name: Klein
- first_name: Ilan
  full_name: Komargodski, Ilan
  last_name: Komargodski
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
- first_name: Daniel
  full_name: Wichs, Daniel
  last_name: Wichs
citation:
  ama: 'Jafargholi Z, Kamath Hosdurg C, Klein K, Komargodski I, Pietrzak KZ, Wichs
    D. Be adaptive avoid overcommitting. In: Katz J, Shacham H, eds. Vol 10401. Springer;
    2017:133-163. doi:<a href="https://doi.org/10.1007/978-3-319-63688-7_5">10.1007/978-3-319-63688-7_5</a>'
  apa: 'Jafargholi, Z., Kamath Hosdurg, C., Klein, K., Komargodski, I., Pietrzak,
    K. Z., &#38; Wichs, D. (2017). Be adaptive avoid overcommitting. In J. Katz &#38;
    H. Shacham (Eds.) (Vol. 10401, pp. 133–163). Presented at the CRYPTO: Cryptology,
    Santa Barbara, CA, United States: Springer. <a href="https://doi.org/10.1007/978-3-319-63688-7_5">https://doi.org/10.1007/978-3-319-63688-7_5</a>'
  chicago: Jafargholi, Zahra, Chethan Kamath Hosdurg, Karen Klein, Ilan Komargodski,
    Krzysztof Z Pietrzak, and Daniel Wichs. “Be Adaptive Avoid Overcommitting.” edited
    by Jonathan Katz and Hovav Shacham, 10401:133–63. Springer, 2017. <a href="https://doi.org/10.1007/978-3-319-63688-7_5">https://doi.org/10.1007/978-3-319-63688-7_5</a>.
  ieee: 'Z. Jafargholi, C. Kamath Hosdurg, K. Klein, I. Komargodski, K. Z. Pietrzak,
    and D. Wichs, “Be adaptive avoid overcommitting,” presented at the CRYPTO: Cryptology,
    Santa Barbara, CA, United States, 2017, vol. 10401, pp. 133–163.'
  ista: 'Jafargholi Z, Kamath Hosdurg C, Klein K, Komargodski I, Pietrzak KZ, Wichs
    D. 2017. Be adaptive avoid overcommitting. CRYPTO: Cryptology, LNCS, vol. 10401,
    133–163.'
  mla: Jafargholi, Zahra, et al. <i>Be Adaptive Avoid Overcommitting</i>. Edited by
    Jonathan Katz and Hovav Shacham, vol. 10401, Springer, 2017, pp. 133–63, doi:<a
    href="https://doi.org/10.1007/978-3-319-63688-7_5">10.1007/978-3-319-63688-7_5</a>.
  short: Z. Jafargholi, C. Kamath Hosdurg, K. Klein, I. Komargodski, K.Z. Pietrzak,
    D. Wichs, in:, J. Katz, H. Shacham (Eds.), Springer, 2017, pp. 133–163.
conference:
  end_date: 2017-07-24
  location: Santa Barbara, CA, United States
  name: 'CRYPTO: Cryptology'
  start_date: 2017-07-20
date_created: 2018-12-11T11:47:38Z
date_published: 2017-01-01T00:00:00Z
date_updated: 2026-04-08T07:01:44Z
day: '01'
department:
- _id: KrPi
doi: 10.1007/978-3-319-63688-7_5
ec_funded: 1
editor:
- first_name: Jonathan
  full_name: Katz, Jonathan
  last_name: Katz
- first_name: Hovav
  full_name: Shacham, Hovav
  last_name: Shacham
external_id:
  isi:
  - '000438672600005'
intvolume: '     10401'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://eprint.iacr.org/2017/515
month: '01'
oa: 1
oa_version: Submitted Version
page: 133 - 163
project:
- _id: 258AA5B2-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '682815'
  name: Teaching Old Crypto New Tricks
publication_identifier:
  isbn:
  - 978-331963687-0
publication_status: published
publisher: Springer
publist_id: '7151'
quality_controlled: '1'
related_material:
  record:
  - id: '10035'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Be adaptive avoid overcommitting
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 10401
year: '2017'
...
---
_id: '638'
abstract:
- lang: eng
  text: "This book constitutes the refereed proceedings of the 9th InternationalWorkshop
    on Numerical Software Verification, NSV 2016, held in Toronto, ON, Canada in July
    2011 - colocated with CAV 2016, the 28th International Conference on Computer
    Aided Verification.\r\nThe NSV workshop is dedicated to the development of logical
    and mathematical techniques for the reasoning about programmability and reliability."
alternative_title:
- LNCS
article_processing_charge: No
citation:
  ama: Bogomolov S, Martel M, Prabhakar P, eds. <i>Numerical Software Verification</i>.
    Vol 10152. Springer; 2017. doi:<a href="https://doi.org/10.1007/978-3-319-54292-8">10.1007/978-3-319-54292-8</a>
  apa: 'Bogomolov, S., Martel, M., &#38; Prabhakar, P. (Eds.). (2017). <i>Numerical
    Software Verification</i> (Vol. 10152). Presented at the NSV: Numerical Software
    Verification, Toronto, ON, Canada: Springer. <a href="https://doi.org/10.1007/978-3-319-54292-8">https://doi.org/10.1007/978-3-319-54292-8</a>'
  chicago: Bogomolov, Sergiy, Matthieu Martel, and Pavithra Prabhakar, eds. <i>Numerical
    Software Verification</i>. Vol. 10152. Springer, 2017. <a href="https://doi.org/10.1007/978-3-319-54292-8">https://doi.org/10.1007/978-3-319-54292-8</a>.
  ieee: S. Bogomolov, M. Martel, and P. Prabhakar, Eds., <i>Numerical Software Verification</i>,
    vol. 10152. Springer, 2017.
  ista: Bogomolov S, Martel M, Prabhakar P eds. 2017. Numerical Software Verification,
    Springer,p.
  mla: Bogomolov, Sergiy, et al., editors. <i>Numerical Software Verification</i>.
    Vol. 10152, Springer, 2017, doi:<a href="https://doi.org/10.1007/978-3-319-54292-8">10.1007/978-3-319-54292-8</a>.
  short: S. Bogomolov, M. Martel, P. Prabhakar, eds., Numerical Software Verification,
    Springer, 2017.
conference:
  end_date: 2016-07-18
  location: Toronto, ON, Canada
  name: 'NSV: Numerical Software Verification'
  start_date: 2016-07-17
date_created: 2018-12-11T11:47:38Z
date_published: 2017-01-01T00:00:00Z
date_updated: 2026-03-31T12:28:01Z
day: '01'
department:
- _id: ToHe
doi: 10.1007/978-3-319-54292-8
editor:
- first_name: Sergiy
  full_name: Bogomolov, Sergiy
  id: 369D9A44-F248-11E8-B48F-1D18A9856A87
  last_name: Bogomolov
  orcid: 0000-0002-0686-0365
- first_name: Matthieu
  full_name: Martel, Matthieu
  last_name: Martel
- first_name: Pavithra
  full_name: Prabhakar, Pavithra
  last_name: Prabhakar
intvolume: '     10152'
language:
- iso: eng
month: '01'
oa_version: None
publication_identifier:
  eisbn:
  - 978-3-319-54292-8
  issn:
  - 0302-9743
publication_status: published
publisher: Springer
publist_id: '7150'
quality_controlled: '1'
status: public
title: Numerical Software Verification
type: conference_editor
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 10152
year: '2017'
...
---
_id: '640'
abstract:
- lang: eng
  text: 'Data-independent Memory Hard Functions (iMHFS) are finding a growing number
    of applications in security; especially in the domain of password hashing. An
    important property of a concrete iMHF is specified by fixing a directed acyclic
    graph (DAG) Gn on n nodes. The quality of that iMHF is then captured by the following
    two pebbling complexities of Gn: – The parallel cumulative pebbling complexity
    Π∥cc(Gn) must be as high as possible (to ensure that the amortized cost of computing
    the function on dedicated hardware is dominated by the cost of memory). – The
    sequential space-time pebbling complexity Πst(Gn) should be as close as possible
    to Π∥cc(Gn) (to ensure that using many cores in parallel and amortizing over many
    instances does not give much of an advantage). In this paper we construct a family
    of DAGs with best possible parameters in an asymptotic sense, i.e., where Π∥cc(Gn)
    = Ω(n2/ log(n)) (which matches a known upper bound) and Πst(Gn) is within a constant
    factor of Π∥cc(Gn). Our analysis relies on a new connection between the pebbling
    complexity of a DAG and its depth-robustness (DR) – a well studied combinatorial
    property. We show that high DR is sufficient for high Π∥cc. Alwen and Blocki (CRYPTO’16)
    showed that high DR is necessary and so, together, these results fully characterize
    DAGs with high Π∥cc in terms of DR. Complementing these results, we provide new
    upper and lower bounds on the Π∥cc of several important candidate iMHFs from the
    literature. We give the first lower bounds on the memory hardness of the Catena
    and Balloon Hashing functions in a parallel model of computation and we give the
    first lower bounds of any kind for (a version) of Argon2i. Finally we describe
    a new class of pebbling attacks improving on those of Alwen and Blocki (CRYPTO’16).
    By instantiating these attacks we upperbound the Π∥cc of the Password Hashing
    Competition winner Argon2i and one of the Balloon Hashing functions by O (n1.71).
    We also show an upper bound of O(n1.625) for the Catena functions and the two
    remaining Balloon Hashing functions.'
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Joel F
  full_name: Alwen, Joel F
  id: 2A8DFA8C-F248-11E8-B48F-1D18A9856A87
  last_name: Alwen
- first_name: Jeremiah
  full_name: Blocki, Jeremiah
  last_name: Blocki
- first_name: Krzysztof Z
  full_name: Pietrzak, Krzysztof Z
  id: 3E04A7AA-F248-11E8-B48F-1D18A9856A87
  last_name: Pietrzak
  orcid: 0000-0002-9139-1654
citation:
  ama: 'Alwen JF, Blocki J, Pietrzak KZ. Depth-robust graphs and their cumulative
    memory complexity. In: Coron J-S, Buus Nielsen J, eds. Vol 10212. Springer; 2017:3-32.
    doi:<a href="https://doi.org/10.1007/978-3-319-56617-7_1">10.1007/978-3-319-56617-7_1</a>'
  apa: 'Alwen, J. F., Blocki, J., &#38; Pietrzak, K. Z. (2017). Depth-robust graphs
    and their cumulative memory complexity. In J.-S. Coron &#38; J. Buus Nielsen (Eds.)
    (Vol. 10212, pp. 3–32). Presented at the EUROCRYPT: Theory and Applications of
    Cryptographic Techniques, Paris, France: Springer. <a href="https://doi.org/10.1007/978-3-319-56617-7_1">https://doi.org/10.1007/978-3-319-56617-7_1</a>'
  chicago: Alwen, Joel F, Jeremiah Blocki, and Krzysztof Z Pietrzak. “Depth-Robust
    Graphs and Their Cumulative Memory Complexity.” edited by Jean-Sébastien Coron
    and Jesper Buus Nielsen, 10212:3–32. Springer, 2017. <a href="https://doi.org/10.1007/978-3-319-56617-7_1">https://doi.org/10.1007/978-3-319-56617-7_1</a>.
  ieee: 'J. F. Alwen, J. Blocki, and K. Z. Pietrzak, “Depth-robust graphs and their
    cumulative memory complexity,” presented at the EUROCRYPT: Theory and Applications
    of Cryptographic Techniques, Paris, France, 2017, vol. 10212, pp. 3–32.'
  ista: 'Alwen JF, Blocki J, Pietrzak KZ. 2017. Depth-robust graphs and their cumulative
    memory complexity. EUROCRYPT: Theory and Applications of Cryptographic Techniques,
    LNCS, vol. 10212, 3–32.'
  mla: Alwen, Joel F., et al. <i>Depth-Robust Graphs and Their Cumulative Memory Complexity</i>.
    Edited by Jean-Sébastien Coron and Jesper Buus Nielsen, vol. 10212, Springer,
    2017, pp. 3–32, doi:<a href="https://doi.org/10.1007/978-3-319-56617-7_1">10.1007/978-3-319-56617-7_1</a>.
  short: J.F. Alwen, J. Blocki, K.Z. Pietrzak, in:, J.-S. Coron, J. Buus Nielsen (Eds.),
    Springer, 2017, pp. 3–32.
conference:
  end_date: 2017-05-04
  location: Paris, France
  name: 'EUROCRYPT: Theory and Applications of Cryptographic Techniques'
  start_date: 2017-04-30
corr_author: '1'
date_created: 2018-12-11T11:47:39Z
date_published: 2017-04-01T00:00:00Z
date_updated: 2025-09-11T07:21:36Z
day: '01'
department:
- _id: KrPi
doi: 10.1007/978-3-319-56617-7_1
ec_funded: 1
editor:
- first_name: Jean-Sébastien
  full_name: Coron, Jean-Sébastien
  last_name: Coron
- first_name: Jesper
  full_name: Buus Nielsen, Jesper
  last_name: Buus Nielsen
external_id:
  isi:
  - '000419175900001'
intvolume: '     10212'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://eprint.iacr.org/2016/875
month: '04'
oa: 1
oa_version: Submitted Version
page: 3 - 32
project:
- _id: 258AA5B2-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '682815'
  name: Teaching Old Crypto New Tricks
publication_identifier:
  isbn:
  - 978-331956616-0
publication_status: published
publisher: Springer
publist_id: '7148'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Depth-robust graphs and their cumulative memory complexity
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 10212
year: '2017'
...
---
_id: '641'
abstract:
- lang: eng
  text: 'We introduce two novel methods for learning parameters of graphical models
    for image labelling. The following two tasks underline both methods: (i) perturb
    model parameters based on given features and ground truth labelings, so as to
    exactly reproduce these labelings as optima of the local polytope relaxation of
    the labelling problem; (ii) train a predictor for the perturbed model parameters
    so that improved model parameters can be applied to the labelling of novel data.
    Our first method implements task (i) by inverse linear programming and task (ii)
    using a regressor e.g. a Gaussian process. Our second approach simultaneously
    solves tasks (i) and (ii) in a joint manner, while being restricted to linearly
    parameterised predictors. Experiments demonstrate the merits of both approaches.'
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Vera
  full_name: Trajkovska, Vera
  last_name: Trajkovska
- first_name: Paul
  full_name: Swoboda, Paul
  id: 446560C6-F248-11E8-B48F-1D18A9856A87
  last_name: Swoboda
- first_name: Freddie
  full_name: Åström, Freddie
  last_name: Åström
- first_name: Stefanie
  full_name: Petra, Stefanie
  last_name: Petra
citation:
  ama: 'Trajkovska V, Swoboda P, Åström F, Petra S. Graphical model parameter learning
    by inverse linear programming. In: Lauze F, Dong Y, Bjorholm Dahl A, eds. Vol
    10302. Springer; 2017:323-334. doi:<a href="https://doi.org/10.1007/978-3-319-58771-4_26">10.1007/978-3-319-58771-4_26</a>'
  apa: 'Trajkovska, V., Swoboda, P., Åström, F., &#38; Petra, S. (2017). Graphical
    model parameter learning by inverse linear programming. In F. Lauze, Y. Dong,
    &#38; A. Bjorholm Dahl (Eds.) (Vol. 10302, pp. 323–334). Presented at the SSVM:
    Scale Space and Variational Methods in Computer Vision, Kolding, Denmark: Springer.
    <a href="https://doi.org/10.1007/978-3-319-58771-4_26">https://doi.org/10.1007/978-3-319-58771-4_26</a>'
  chicago: Trajkovska, Vera, Paul Swoboda, Freddie Åström, and Stefanie Petra. “Graphical
    Model Parameter Learning by Inverse Linear Programming.” edited by François Lauze,
    Yiqiu Dong, and Anders Bjorholm Dahl, 10302:323–34. Springer, 2017. <a href="https://doi.org/10.1007/978-3-319-58771-4_26">https://doi.org/10.1007/978-3-319-58771-4_26</a>.
  ieee: 'V. Trajkovska, P. Swoboda, F. Åström, and S. Petra, “Graphical model parameter
    learning by inverse linear programming,” presented at the SSVM: Scale Space and
    Variational Methods in Computer Vision, Kolding, Denmark, 2017, vol. 10302, pp.
    323–334.'
  ista: 'Trajkovska V, Swoboda P, Åström F, Petra S. 2017. Graphical model parameter
    learning by inverse linear programming. SSVM: Scale Space and Variational Methods
    in Computer Vision, LNCS, vol. 10302, 323–334.'
  mla: Trajkovska, Vera, et al. <i>Graphical Model Parameter Learning by Inverse Linear
    Programming</i>. Edited by François Lauze et al., vol. 10302, Springer, 2017,
    pp. 323–34, doi:<a href="https://doi.org/10.1007/978-3-319-58771-4_26">10.1007/978-3-319-58771-4_26</a>.
  short: V. Trajkovska, P. Swoboda, F. Åström, S. Petra, in:, F. Lauze, Y. Dong, A.
    Bjorholm Dahl (Eds.), Springer, 2017, pp. 323–334.
conference:
  end_date: 2017-06-08
  location: Kolding, Denmark
  name: 'SSVM: Scale Space and Variational Methods in Computer Vision'
  start_date: 2017-06-04
date_created: 2018-12-11T11:47:39Z
date_published: 2017-01-01T00:00:00Z
date_updated: 2025-09-11T07:20:56Z
day: '01'
department:
- _id: VlKo
doi: 10.1007/978-3-319-58771-4_26
editor:
- first_name: François
  full_name: Lauze, François
  last_name: Lauze
- first_name: Yiqiu
  full_name: Dong, Yiqiu
  last_name: Dong
- first_name: Anders
  full_name: Bjorholm Dahl, Anders
  last_name: Bjorholm Dahl
external_id:
  isi:
  - '000432210900026'
intvolume: '     10302'
isi: 1
language:
- iso: eng
month: '01'
oa_version: None
page: 323 - 334
publication_identifier:
  isbn:
  - 978-331958770-7
publication_status: published
publisher: Springer
publist_id: '7147'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Graphical model parameter learning by inverse linear programming
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 10302
year: '2017'
...
---
OA_place: repository
OA_type: green
_id: '19810'
abstract:
- lang: eng
  text: Engineering and enhancing the breaking of inversion symmetry in solids—that
    is, allowing electrons to differentiate between ‘up’ and ‘down’—is a key goal
    in condensed-matter physics and materials science because it can be used to stabilize
    states that are of fundamental interest and also have potential practical applications.
    Examples include improved ferroelectrics for memory devices and materials that
    host Majorana zero modes for quantum computing1,2. Although inversion symmetry
    is naturally broken in several crystalline environments, such as at surfaces and
    interfaces, maximizing the influence of this effect on the electronic states of
    interest remains a challenge. Here we present a mechanism for realizing a much
    larger coupling of inversion-symmetry breaking to itinerant surface electrons
    than is typically achieved. The key element is a pronounced asymmetry of surface
    hopping energies—that is, a kinetic-energy-coupled inversion-symmetry breaking,
    the energy scale of which is a substantial fraction of the bandwidth. Using spin-
    and angle-resolved photoemission spectroscopy, we demonstrate that such a strong
    inversion-symmetry breaking, when combined with spin–orbit interactions, can mediate
    Rashba-like3,4 spin splittings that are much larger than would typically be expected.
    The energy scale of the inversion-symmetry breaking that we achieve is so large
    that the spin splitting in the CoO2- and RhO2-derived surface states of delafossite
    oxides becomes controlled by the full atomic spin–orbit coupling of the 3d and
    4d transition metals, resulting in some of the largest known Rashba-like3,4 spin
    splittings. The core structural building blocks that facilitate the bandwidth-scaled
    inversion-symmetry breaking are common to numerous materials. Our findings therefore
    provide opportunities for creating spin-textured states and suggest routes to
    interfacial control of inversion-symmetry breaking in designer heterostructures
    of oxides and other material classes.
article_processing_charge: No
article_type: letter_note
arxiv: 1
author:
- first_name: Veronika
  full_name: Sunko, Veronika
  id: 23cb1cf6-2c7a-11ef-91a4-f72fc19f20b3
  last_name: Sunko
  orcid: 0000-0003-2724-3523
- first_name: H.
  full_name: Rosner, H.
  last_name: Rosner
- first_name: P.
  full_name: Kushwaha, P.
  last_name: Kushwaha
- first_name: S.
  full_name: Khim, S.
  last_name: Khim
- first_name: F.
  full_name: Mazzola, F.
  last_name: Mazzola
- first_name: L.
  full_name: Bawden, L.
  last_name: Bawden
- first_name: O. J.
  full_name: Clark, O. J.
  last_name: Clark
- first_name: J. M.
  full_name: Riley, J. M.
  last_name: Riley
- first_name: D.
  full_name: Kasinathan, D.
  last_name: Kasinathan
- first_name: M. W.
  full_name: Haverkort, M. W.
  last_name: Haverkort
- first_name: T. K.
  full_name: Kim, T. K.
  last_name: Kim
- first_name: M.
  full_name: Hoesch, M.
  last_name: Hoesch
- first_name: J.
  full_name: Fujii, J.
  last_name: Fujii
- first_name: I.
  full_name: Vobornik, I.
  last_name: Vobornik
- first_name: A. P.
  full_name: Mackenzie, A. P.
  last_name: Mackenzie
- first_name: P. D. C.
  full_name: King, P. D. C.
  last_name: King
citation:
  ama: Sunko V, Rosner H, Kushwaha P, et al. Maximal Rashba-like spin splitting via
    kinetic-energy-coupled inversion-symmetry breaking. <i>Nature</i>. 2017;549(7673):492-496.
    doi:<a href="https://doi.org/10.1038/nature23898">10.1038/nature23898</a>
  apa: Sunko, V., Rosner, H., Kushwaha, P., Khim, S., Mazzola, F., Bawden, L., … King,
    P. D. C. (2017). Maximal Rashba-like spin splitting via kinetic-energy-coupled
    inversion-symmetry breaking. <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/nature23898">https://doi.org/10.1038/nature23898</a>
  chicago: Sunko, Veronika, H. Rosner, P. Kushwaha, S. Khim, F. Mazzola, L. Bawden,
    O. J. Clark, et al. “Maximal Rashba-like Spin Splitting via Kinetic-Energy-Coupled
    Inversion-Symmetry Breaking.” <i>Nature</i>. Springer Nature, 2017. <a href="https://doi.org/10.1038/nature23898">https://doi.org/10.1038/nature23898</a>.
  ieee: V. Sunko <i>et al.</i>, “Maximal Rashba-like spin splitting via kinetic-energy-coupled
    inversion-symmetry breaking,” <i>Nature</i>, vol. 549, no. 7673. Springer Nature,
    pp. 492–496, 2017.
  ista: Sunko V, Rosner H, Kushwaha P, Khim S, Mazzola F, Bawden L, Clark OJ, Riley
    JM, Kasinathan D, Haverkort MW, Kim TK, Hoesch M, Fujii J, Vobornik I, Mackenzie
    AP, King PDC. 2017. Maximal Rashba-like spin splitting via kinetic-energy-coupled
    inversion-symmetry breaking. Nature. 549(7673), 492–496.
  mla: Sunko, Veronika, et al. “Maximal Rashba-like Spin Splitting via Kinetic-Energy-Coupled
    Inversion-Symmetry Breaking.” <i>Nature</i>, vol. 549, no. 7673, Springer Nature,
    2017, pp. 492–96, doi:<a href="https://doi.org/10.1038/nature23898">10.1038/nature23898</a>.
  short: V. Sunko, H. Rosner, P. Kushwaha, S. Khim, F. Mazzola, L. Bawden, O.J. Clark,
    J.M. Riley, D. Kasinathan, M.W. Haverkort, T.K. Kim, M. Hoesch, J. Fujii, I. Vobornik,
    A.P. Mackenzie, P.D.C. King, Nature 549 (2017) 492–496.
date_created: 2025-06-10T09:13:08Z
date_published: 2017-09-28T00:00:00Z
date_updated: 2025-06-10T11:55:09Z
day: '28'
doi: 10.1038/nature23898
extern: '1'
external_id:
  arxiv:
  - '1708.03887'
  pmid:
  - '28959958'
intvolume: '       549'
issue: '7673'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1708.03887
month: '09'
oa: 1
oa_version: Preprint
page: 492-496
pmid: 1
publication: Nature
publication_identifier:
  eissn:
  - 1476-4687
  issn:
  - 0028-0836
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Maximal Rashba-like spin splitting via kinetic-energy-coupled inversion-symmetry
  breaking
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 549
year: '2017'
...
---
OA_place: repository
OA_type: green
_id: '19811'
abstract:
- lang: eng
  text: We report on a combined study of the de Haas-van Alphen effect and angle-resolved
    photoemission spectroscopy on single crystals of the metallic delafossite rounded
    off by ab initio band structure calculations. A high-sensitivity torque magnetometry
    setup with superconducting quantum interference device readout and synchrotron-based
    photoemission with a light spot size of enabled high-resolution data to be obtained
    from samples as small as . The Fermi surface shape is nearly cylindrical with
    a rounded hexagonal cross section enclosing a Luttinger volume of 1.00(1) electrons
    per formula unit.
article_number: '075163'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: F.
  full_name: Arnold, F.
  last_name: Arnold
- first_name: M.
  full_name: Naumann, M.
  last_name: Naumann
- first_name: S.
  full_name: Khim, S.
  last_name: Khim
- first_name: H.
  full_name: Rosner, H.
  last_name: Rosner
- first_name: Veronika
  full_name: Sunko, Veronika
  id: 23cb1cf6-2c7a-11ef-91a4-f72fc19f20b3
  last_name: Sunko
  orcid: 0000-0003-2724-3523
- first_name: F.
  full_name: Mazzola, F.
  last_name: Mazzola
- first_name: P. D. C.
  full_name: King, P. D. C.
  last_name: King
- first_name: A. P.
  full_name: Mackenzie, A. P.
  last_name: Mackenzie
- first_name: E.
  full_name: Hassinger, E.
  last_name: Hassinger
citation:
  ama: Arnold F, Naumann M, Khim S, et al. Quasi-two-dimensional Fermi surface topography
    of the delafossite PdRhO2. <i>Physical Review B</i>. 2017;96(7). doi:<a href="https://doi.org/10.1103/physrevb.96.075163">10.1103/physrevb.96.075163</a>
  apa: Arnold, F., Naumann, M., Khim, S., Rosner, H., Sunko, V., Mazzola, F., … Hassinger,
    E. (2017). Quasi-two-dimensional Fermi surface topography of the delafossite PdRhO2.
    <i>Physical Review B</i>. American Physical Society. <a href="https://doi.org/10.1103/physrevb.96.075163">https://doi.org/10.1103/physrevb.96.075163</a>
  chicago: Arnold, F., M. Naumann, S. Khim, H. Rosner, Veronika Sunko, F. Mazzola,
    P. D. C. King, A. P. Mackenzie, and E. Hassinger. “Quasi-Two-Dimensional Fermi
    Surface Topography of the Delafossite PdRhO2.” <i>Physical Review B</i>. American
    Physical Society, 2017. <a href="https://doi.org/10.1103/physrevb.96.075163">https://doi.org/10.1103/physrevb.96.075163</a>.
  ieee: F. Arnold <i>et al.</i>, “Quasi-two-dimensional Fermi surface topography of
    the delafossite PdRhO2,” <i>Physical Review B</i>, vol. 96, no. 7. American Physical
    Society, 2017.
  ista: Arnold F, Naumann M, Khim S, Rosner H, Sunko V, Mazzola F, King PDC, Mackenzie
    AP, Hassinger E. 2017. Quasi-two-dimensional Fermi surface topography of the delafossite
    PdRhO2. Physical Review B. 96(7), 075163.
  mla: Arnold, F., et al. “Quasi-Two-Dimensional Fermi Surface Topography of the Delafossite
    PdRhO2.” <i>Physical Review B</i>, vol. 96, no. 7, 075163, American Physical Society,
    2017, doi:<a href="https://doi.org/10.1103/physrevb.96.075163">10.1103/physrevb.96.075163</a>.
  short: F. Arnold, M. Naumann, S. Khim, H. Rosner, V. Sunko, F. Mazzola, P.D.C. King,
    A.P. Mackenzie, E. Hassinger, Physical Review B 96 (2017).
date_created: 2025-06-10T09:13:38Z
date_published: 2017-08-31T00:00:00Z
date_updated: 2025-06-10T11:59:05Z
day: '31'
doi: 10.1103/physrevb.96.075163
extern: '1'
external_id:
  arxiv:
  - '1706.08865'
intvolume: '        96'
issue: '7'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1706.08865
month: '08'
oa: 1
oa_version: Preprint
publication: Physical Review B
publication_identifier:
  eissn:
  - 2469-9969
  issn:
  - 2469-9950
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Quasi-two-dimensional Fermi surface topography of the delafossite PdRhO2
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 96
year: '2017'
...
---
OA_place: repository
OA_type: green
_id: '19815'
abstract:
- lang: eng
  text: We report growth of single crystals of the nonmagnetic metallic delafossite
    PdRhO2, comparing the results from three different methods. Complete crystallographic
    data were obtained from single crystal X-ray diffraction, and electronic structure
    calculations were made using the refined structural parameters. Focused-ion beam
    microstructuring was used to prepare a sample for measurements of the in- and
    out-of-plane electrical resistivity, and the large observed anisotropy is qualitatively
    consistent with the cylindrical Fermi surface predicted by the calculations.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: P.
  full_name: Kushwaha, P.
  last_name: Kushwaha
- first_name: H.
  full_name: Borrmann, H.
  last_name: Borrmann
- first_name: S.
  full_name: Khim, S.
  last_name: Khim
- first_name: H.
  full_name: Rosner, H.
  last_name: Rosner
- first_name: P. J. W.
  full_name: Moll, P. J. W.
  last_name: Moll
- first_name: D. A.
  full_name: Sokolov, D. A.
  last_name: Sokolov
- first_name: Veronika
  full_name: Sunko, Veronika
  id: 23cb1cf6-2c7a-11ef-91a4-f72fc19f20b3
  last_name: Sunko
  orcid: 0000-0003-2724-3523
- first_name: Yu.
  full_name: Grin, Yu.
  last_name: Grin
- first_name: A. P.
  full_name: Mackenzie, A. P.
  last_name: Mackenzie
citation:
  ama: Kushwaha P, Borrmann H, Khim S, et al. Single crystal growth, structure, and
    electronic properties of metallic delafossite PdRhO2. <i>Crystal Growth &#38;
    Design</i>. 2017;17(8):4144-4150. doi:<a href="https://doi.org/10.1021/acs.cgd.7b00418">10.1021/acs.cgd.7b00418</a>
  apa: Kushwaha, P., Borrmann, H., Khim, S., Rosner, H., Moll, P. J. W., Sokolov,
    D. A., … Mackenzie, A. P. (2017). Single crystal growth, structure, and electronic
    properties of metallic delafossite PdRhO2. <i>Crystal Growth &#38; Design</i>.
    American Chemical Society. <a href="https://doi.org/10.1021/acs.cgd.7b00418">https://doi.org/10.1021/acs.cgd.7b00418</a>
  chicago: Kushwaha, P., H. Borrmann, S. Khim, H. Rosner, P. J. W. Moll, D. A. Sokolov,
    Veronika Sunko, Yu. Grin, and A. P. Mackenzie. “Single Crystal Growth, Structure,
    and Electronic Properties of Metallic Delafossite PdRhO2.” <i>Crystal Growth &#38;
    Design</i>. American Chemical Society, 2017. <a href="https://doi.org/10.1021/acs.cgd.7b00418">https://doi.org/10.1021/acs.cgd.7b00418</a>.
  ieee: P. Kushwaha <i>et al.</i>, “Single crystal growth, structure, and electronic
    properties of metallic delafossite PdRhO2,” <i>Crystal Growth &#38; Design</i>,
    vol. 17, no. 8. American Chemical Society, pp. 4144–4150, 2017.
  ista: Kushwaha P, Borrmann H, Khim S, Rosner H, Moll PJW, Sokolov DA, Sunko V, Grin
    Y, Mackenzie AP. 2017. Single crystal growth, structure, and electronic properties
    of metallic delafossite PdRhO2. Crystal Growth &#38; Design. 17(8), 4144–4150.
  mla: Kushwaha, P., et al. “Single Crystal Growth, Structure, and Electronic Properties
    of Metallic Delafossite PdRhO2.” <i>Crystal Growth &#38; Design</i>, vol. 17,
    no. 8, American Chemical Society, 2017, pp. 4144–50, doi:<a href="https://doi.org/10.1021/acs.cgd.7b00418">10.1021/acs.cgd.7b00418</a>.
  short: P. Kushwaha, H. Borrmann, S. Khim, H. Rosner, P.J.W. Moll, D.A. Sokolov,
    V. Sunko, Y. Grin, A.P. Mackenzie, Crystal Growth &#38; Design 17 (2017) 4144–4150.
date_created: 2025-06-10T09:16:10Z
date_published: 2017-06-30T00:00:00Z
date_updated: 2025-06-10T12:24:49Z
day: '30'
doi: 10.1021/acs.cgd.7b00418
extern: '1'
external_id:
  arxiv:
  - '1706.07614'
intvolume: '        17'
issue: '8'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1706.07614
month: '06'
oa: 1
oa_version: Preprint
page: 4144-4150
publication: Crystal Growth & Design
publication_identifier:
  eissn:
  - 1528-7505
  issn:
  - 1528-7483
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Single crystal growth, structure, and electronic properties of metallic delafossite
  PdRhO2
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 17
year: '2017'
...
---
_id: '2016'
abstract:
- lang: eng
  text: The Ising model is one of the simplest and most famous models of interacting
    systems. It was originally proposed to model ferromagnetic interactions in statistical
    physics and is now widely used to model spatial processes in many areas such as
    ecology, sociology, and genetics, usually without testing its goodness-of-fit.
    Here, we propose an exact goodness-of-fit test for the finite-lattice Ising model.
    The theory of Markov bases has been developed in algebraic statistics for exact
    goodness-of-fit testing using a Monte Carlo approach. However, this beautiful
    theory has fallen short of its promise for applications, because finding a Markov
    basis is usually computationally intractable. We develop a Monte Carlo method
    for exact goodness-of-fit testing for the Ising model which avoids computing a
    Markov basis and also leads to a better connectivity of the Markov chain and hence
    to a faster convergence. We show how this method can be applied to analyze the
    spatial organization of receptors on the cell membrane.
article_processing_charge: No
arxiv: 1
author:
- first_name: Abraham
  full_name: Martin Del Campo Sanchez, Abraham
  last_name: Martin Del Campo Sanchez
- first_name: Sarah A
  full_name: Cepeda Humerez, Sarah A
  id: 3DEE19A4-F248-11E8-B48F-1D18A9856A87
  last_name: Cepeda Humerez
- first_name: Caroline
  full_name: Uhler, Caroline
  id: 49ADD78E-F248-11E8-B48F-1D18A9856A87
  last_name: Uhler
  orcid: 0000-0002-7008-0216
citation:
  ama: Martin Del Campo Sanchez A, Cepeda Humerez SA, Uhler C. Exact goodness-of-fit
    testing for the Ising model. <i>Scandinavian Journal of Statistics</i>. 2017;44(2):285-306.
    doi:<a href="https://doi.org/10.1111/sjos.12251">10.1111/sjos.12251</a>
  apa: Martin Del Campo Sanchez, A., Cepeda Humerez, S. A., &#38; Uhler, C. (2017).
    Exact goodness-of-fit testing for the Ising model. <i>Scandinavian Journal of
    Statistics</i>. Wiley-Blackwell. <a href="https://doi.org/10.1111/sjos.12251">https://doi.org/10.1111/sjos.12251</a>
  chicago: Martin Del Campo Sanchez, Abraham, Sarah A Cepeda Humerez, and Caroline
    Uhler. “Exact Goodness-of-Fit Testing for the Ising Model.” <i>Scandinavian Journal
    of Statistics</i>. Wiley-Blackwell, 2017. <a href="https://doi.org/10.1111/sjos.12251">https://doi.org/10.1111/sjos.12251</a>.
  ieee: A. Martin Del Campo Sanchez, S. A. Cepeda Humerez, and C. Uhler, “Exact goodness-of-fit
    testing for the Ising model,” <i>Scandinavian Journal of Statistics</i>, vol.
    44, no. 2. Wiley-Blackwell, pp. 285–306, 2017.
  ista: Martin Del Campo Sanchez A, Cepeda Humerez SA, Uhler C. 2017. Exact goodness-of-fit
    testing for the Ising model. Scandinavian Journal of Statistics. 44(2), 285–306.
  mla: Martin Del Campo Sanchez, Abraham, et al. “Exact Goodness-of-Fit Testing for
    the Ising Model.” <i>Scandinavian Journal of Statistics</i>, vol. 44, no. 2, Wiley-Blackwell,
    2017, pp. 285–306, doi:<a href="https://doi.org/10.1111/sjos.12251">10.1111/sjos.12251</a>.
  short: A. Martin Del Campo Sanchez, S.A. Cepeda Humerez, C. Uhler, Scandinavian
    Journal of Statistics 44 (2017) 285–306.
date_created: 2018-12-11T11:55:13Z
date_published: 2017-06-01T00:00:00Z
date_updated: 2026-04-08T13:55:45Z
day: '01'
department:
- _id: GaTk
doi: 10.1111/sjos.12251
external_id:
  arxiv:
  - '1410.1242'
  isi:
  - '000400985000001'
intvolume: '        44'
isi: 1
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1410.1242
month: '06'
oa: 1
oa_version: Preprint
page: 285 - 306
publication: Scandinavian Journal of Statistics
publication_identifier:
  issn:
  - '03036898'
publication_status: published
publisher: Wiley-Blackwell
publist_id: '5060'
quality_controlled: '1'
related_material:
  record:
  - id: '6473'
    relation: part_of_dissertation
    status: public
scopus_import: '1'
status: public
title: Exact goodness-of-fit testing for the Ising model
type: journal_article
user_id: c635000d-4b10-11ee-a964-aac5a93f6ac1
volume: 44
year: '2017'
...
