---
_id: '466'
abstract:
- lang: eng
  text: 'We consider Markov decision processes (MDPs) with multiple limit-average
    (or mean-payoff) objectives. There exist two different views: (i) the expectation
    semantics, where the goal is to optimize the expected mean-payoff objective, and
    (ii) the satisfaction semantics, where the goal is to maximize the probability
    of runs such that the mean-payoff value stays above a given vector. We consider
    optimization with respect to both objectives at once, thus unifying the existing
    semantics. Precisely, the goal is to optimize the expectation while ensuring the
    satisfaction constraint. Our problem captures the notion of optimization with
    respect to strategies that are risk-averse (i.e., ensure certain probabilistic
    guarantee). Our main results are as follows: First, we present algorithms for
    the decision problems which are always polynomial in the size of the MDP. We also
    show that an approximation of the Pareto-curve can be computed in time polynomial
    in the size of the MDP, and the approximation factor, but exponential in the number
    of dimensions. Second, we present a complete characterization of the strategy
    complexity (in terms of memory bounds and randomization) required to solve our
    problem. '
article_number: '15'
article_processing_charge: No
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Zuzana
  full_name: Křetínská, Zuzana
  last_name: Křetínská
- first_name: Jan
  full_name: Kretinsky, Jan
  id: 44CEF464-F248-11E8-B48F-1D18A9856A87
  last_name: Kretinsky
  orcid: 0000-0002-8122-2881
citation:
  ama: Chatterjee K, Křetínská Z, Kretinsky J. Unifying two views on multiple mean-payoff
    objectives in Markov decision processes. <i>Logical Methods in Computer Science</i>.
    2017;13(2). doi:<a href="https://doi.org/10.23638/LMCS-13(2:15)2017">10.23638/LMCS-13(2:15)2017</a>
  apa: Chatterjee, K., Křetínská, Z., &#38; Kretinsky, J. (2017). Unifying two views
    on multiple mean-payoff objectives in Markov decision processes. <i>Logical Methods
    in Computer Science</i>. International Federation for Computational Logic. <a
    href="https://doi.org/10.23638/LMCS-13(2:15)2017">https://doi.org/10.23638/LMCS-13(2:15)2017</a>
  chicago: Chatterjee, Krishnendu, Zuzana Křetínská, and Jan Kretinsky. “Unifying
    Two Views on Multiple Mean-Payoff Objectives in Markov Decision Processes.” <i>Logical
    Methods in Computer Science</i>. International Federation for Computational Logic,
    2017. <a href="https://doi.org/10.23638/LMCS-13(2:15)2017">https://doi.org/10.23638/LMCS-13(2:15)2017</a>.
  ieee: K. Chatterjee, Z. Křetínská, and J. Kretinsky, “Unifying two views on multiple
    mean-payoff objectives in Markov decision processes,” <i>Logical Methods in Computer
    Science</i>, vol. 13, no. 2. International Federation for Computational Logic,
    2017.
  ista: Chatterjee K, Křetínská Z, Kretinsky J. 2017. Unifying two views on multiple
    mean-payoff objectives in Markov decision processes. Logical Methods in Computer
    Science. 13(2), 15.
  mla: Chatterjee, Krishnendu, et al. “Unifying Two Views on Multiple Mean-Payoff
    Objectives in Markov Decision Processes.” <i>Logical Methods in Computer Science</i>,
    vol. 13, no. 2, 15, International Federation for Computational Logic, 2017, doi:<a
    href="https://doi.org/10.23638/LMCS-13(2:15)2017">10.23638/LMCS-13(2:15)2017</a>.
  short: K. Chatterjee, Z. Křetínská, J. Kretinsky, Logical Methods in Computer Science
    13 (2017).
corr_author: '1'
das_tickbox: '1'
date_created: 2018-12-11T11:46:38Z
date_published: 2017-07-03T00:00:00Z
date_updated: 2026-07-06T13:26:27Z
day: '03'
ddc:
- '004'
department:
- _id: KrCh
doi: 10.23638/LMCS-13(2:15)2017
ec_funded: 1
external_id:
  isi:
  - '000419160800002'
file:
- access_level: open_access
  checksum: bfa405385ec6229ad5ead89ab5751639
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:18:32Z
  date_updated: 2020-07-14T12:46:33Z
  file_id: '5354'
  file_name: IST-2018-957-v1+1_2017_Chatterjee_Unifying_two.pdf
  file_size: 511832
  relation: main_file
file_date_updated: 2020-07-14T12:46:33Z
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isi: 1
issue: '2'
language:
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month: '07'
oa: 1
oa_version: Published Version
project:
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  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
- _id: 2584A770-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P 23499-N23
  name: Modern Graph Algorithmic Techniques in Formal Verification
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
- _id: 2590DB08-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '701309'
  name: Atomic Resolution Structures of Mitochondrial Respiratory Chain Supercomplexes
publication: Logical Methods in Computer Science
publication_identifier:
  issn:
  - 1860-5974
publication_status: published
publisher: International Federation for Computational Logic
publist_id: '7355'
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title: Unifying two views on multiple mean-payoff objectives in Markov decision processes
tmp:
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type: journal_article
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volume: 13
year: '2017'
...
---
_id: '465'
abstract:
- lang: eng
  text: 'The edit distance between two words w 1 , w 2 is the minimal number of word
    operations (letter insertions, deletions, and substitutions) necessary to transform
    w 1 to w 2 . The edit distance generalizes to languages L 1 , L 2 , where the
    edit distance from L 1 to L 2 is the minimal number k such that for every word
    from L 1 there exists a word in L 2 with edit distance at most k . We study the
    edit distance computation problem between pushdown automata and their subclasses.
    The problem of computing edit distance to a pushdown automaton is undecidable,
    and in practice, the interesting question is to compute the edit distance from
    a pushdown automaton (the implementation, a standard model for programs with recursion)
    to a regular language (the specification). In this work, we present a complete
    picture of decidability and complexity for the following problems: (1) deciding
    whether, for a given threshold k , the edit distance from a pushdown automaton
    to a finite automaton is at most k , and (2) deciding whether the edit distance
    from a pushdown automaton to a finite automaton is finite. '
article_processing_charge: No
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Rasmus
  full_name: Ibsen-Jensen, Rasmus
  id: 3B699956-F248-11E8-B48F-1D18A9856A87
  last_name: Ibsen-Jensen
  orcid: 0000-0003-4783-0389
- first_name: Jan
  full_name: Otop, Jan
  last_name: Otop
citation:
  ama: Chatterjee K, Henzinger TA, Ibsen-Jensen R, Otop J. Edit distance for pushdown
    automata. <i>Logical Methods in Computer Science</i>. 2017;13(3). doi:<a href="https://doi.org/10.23638/LMCS-13(3:23)2017">10.23638/LMCS-13(3:23)2017</a>
  apa: Chatterjee, K., Henzinger, T. A., Ibsen-Jensen, R., &#38; Otop, J. (2017).
    Edit distance for pushdown automata. <i>Logical Methods in Computer Science</i>.
    International Federation for Computational Logic. <a href="https://doi.org/10.23638/LMCS-13(3:23)2017">https://doi.org/10.23638/LMCS-13(3:23)2017</a>
  chicago: Chatterjee, Krishnendu, Thomas A Henzinger, Rasmus Ibsen-Jensen, and Jan
    Otop. “Edit Distance for Pushdown Automata.” <i>Logical Methods in Computer Science</i>.
    International Federation for Computational Logic, 2017. <a href="https://doi.org/10.23638/LMCS-13(3:23)2017">https://doi.org/10.23638/LMCS-13(3:23)2017</a>.
  ieee: K. Chatterjee, T. A. Henzinger, R. Ibsen-Jensen, and J. Otop, “Edit distance
    for pushdown automata,” <i>Logical Methods in Computer Science</i>, vol. 13, no.
    3. International Federation for Computational Logic, 2017.
  ista: Chatterjee K, Henzinger TA, Ibsen-Jensen R, Otop J. 2017. Edit distance for
    pushdown automata. Logical Methods in Computer Science. 13(3).
  mla: Chatterjee, Krishnendu, et al. “Edit Distance for Pushdown Automata.” <i>Logical
    Methods in Computer Science</i>, vol. 13, no. 3, International Federation for
    Computational Logic, 2017, doi:<a href="https://doi.org/10.23638/LMCS-13(3:23)2017">10.23638/LMCS-13(3:23)2017</a>.
  short: K. Chatterjee, T.A. Henzinger, R. Ibsen-Jensen, J. Otop, Logical Methods
    in Computer Science 13 (2017).
corr_author: '1'
das_tickbox: '1'
date_created: 2018-12-11T11:46:37Z
date_published: 2017-09-13T00:00:00Z
date_updated: 2026-07-06T13:27:53Z
day: '13'
ddc:
- '004'
department:
- _id: KrCh
- _id: ToHe
doi: 10.23638/LMCS-13(3:23)2017
ec_funded: 1
external_id:
  isi:
  - '000419163000005'
file:
- access_level: open_access
  checksum: 08041379ba408d40664f449eb5907a8f
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  creator: system
  date_created: 2018-12-12T10:14:37Z
  date_updated: 2020-07-14T12:46:33Z
  file_id: '5090'
  file_name: IST-2015-321-v1+1_main.pdf
  file_size: 279071
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  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:14:38Z
  date_updated: 2020-07-14T12:46:33Z
  file_id: '5091'
  file_name: IST-2018-955-v1+1_2017_Chatterjee_Edit_distance.pdf
  file_size: 279071
  relation: main_file
file_date_updated: 2020-07-14T12:46:33Z
has_accepted_license: '1'
intvolume: '        13'
isi: 1
issue: '3'
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
project:
- _id: 25F5A88A-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11402-N23
  name: Moderne Concurrency Paradigms
- _id: 2584A770-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P 23499-N23
  name: Modern Graph Algorithmic Techniques in Formal Verification
- _id: 25F42A32-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: Z211
  name: Formal methods for the design and analysis of complex systems
- _id: 25EE3708-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '267989'
  name: Quantitative Reactive Modeling
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
- _id: 25863FF4-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11407
  name: Game Theory
publication: Logical Methods in Computer Science
publication_identifier:
  issn:
  - 1860-5974
publication_status: published
publisher: International Federation for Computational Logic
publist_id: '7356'
pubrep_id: '955'
quality_controlled: '1'
related_material:
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  - id: '5438'
    relation: earlier_version
    status: public
  - id: '1610'
    relation: earlier_version
    status: public
scopus_import: '1'
status: public
title: Edit distance for pushdown automata
tmp:
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  short: CC BY-ND (4.0)
type: journal_article
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volume: 13
year: '2017'
...
---
_id: '464'
abstract:
- lang: eng
  text: The computation of the winning set for parity objectives and for Streett objectives
    in graphs as well as in game graphs are central problems in computer-aided verification,
    with application to the verification of closed systems with strong fairness conditions,
    the verification of open systems, checking interface compatibility, well-formedness
    of specifications, and the synthesis of reactive systems. We show how to compute
    the winning set on n vertices for (1) parity-3 (aka one-pair Streett) objectives
    in game graphs in time O(n5/2) and for (2) k-pair Streett objectives in graphs
    in time O(n2+nklogn). For both problems this gives faster algorithms for dense
    graphs and represents the first improvement in asymptotic running time in 15 years.
article_number: '26'
article_processing_charge: No
arxiv: 1
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Monika H
  full_name: Henzinger, Monika H
  id: 540c9bbd-f2de-11ec-812d-d04a5be85630
  last_name: Henzinger
  orcid: 0000-0002-5008-6530
- first_name: Veronika
  full_name: Loitzenbauer, Veronika
  last_name: Loitzenbauer
citation:
  ama: Chatterjee K, Henzinger M, Loitzenbauer V. Improved algorithms for parity and
    Streett objectives. <i>Logical Methods in Computer Science</i>. 2017;13(3). doi:<a
    href="https://doi.org/10.23638/LMCS-13(3:26)2017">10.23638/LMCS-13(3:26)2017</a>
  apa: Chatterjee, K., Henzinger, M., &#38; Loitzenbauer, V. (2017). Improved algorithms
    for parity and Streett objectives. <i>Logical Methods in Computer Science</i>.
    International Federation for Computational Logic. <a href="https://doi.org/10.23638/LMCS-13(3:26)2017">https://doi.org/10.23638/LMCS-13(3:26)2017</a>
  chicago: Chatterjee, Krishnendu, Monika Henzinger, and Veronika Loitzenbauer. “Improved
    Algorithms for Parity and Streett Objectives.” <i>Logical Methods in Computer
    Science</i>. International Federation for Computational Logic, 2017. <a href="https://doi.org/10.23638/LMCS-13(3:26)2017">https://doi.org/10.23638/LMCS-13(3:26)2017</a>.
  ieee: K. Chatterjee, M. Henzinger, and V. Loitzenbauer, “Improved algorithms for
    parity and Streett objectives,” <i>Logical Methods in Computer Science</i>, vol.
    13, no. 3. International Federation for Computational Logic, 2017.
  ista: Chatterjee K, Henzinger M, Loitzenbauer V. 2017. Improved algorithms for parity
    and Streett objectives. Logical Methods in Computer Science. 13(3), 26.
  mla: Chatterjee, Krishnendu, et al. “Improved Algorithms for Parity and Streett
    Objectives.” <i>Logical Methods in Computer Science</i>, vol. 13, no. 3, 26, International
    Federation for Computational Logic, 2017, doi:<a href="https://doi.org/10.23638/LMCS-13(3:26)2017">10.23638/LMCS-13(3:26)2017</a>.
  short: K. Chatterjee, M. Henzinger, V. Loitzenbauer, Logical Methods in Computer
    Science 13 (2017).
corr_author: '1'
das_tickbox: '1'
date_created: 2018-12-11T11:46:37Z
date_published: 2017-09-26T00:00:00Z
date_updated: 2026-07-06T13:28:05Z
day: '26'
ddc:
- '004'
department:
- _id: KrCh
doi: 10.23638/LMCS-13(3:26)2017
ec_funded: 1
external_id:
  arxiv:
  - '1410.0833'
  isi:
  - '000419163000001'
file:
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  creator: system
  date_created: 2018-12-12T10:13:27Z
  date_updated: 2020-07-14T12:46:32Z
  file_id: '5010'
  file_name: IST-2018-956-v1+1_2017_Chatterjee_Improved_algorithms.pdf
  file_size: 582940
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has_accepted_license: '1'
intvolume: '        13'
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issue: '3'
language:
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month: '09'
oa: 1
oa_version: Published Version
project:
- _id: 2584A770-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P 23499-N23
  name: Modern Graph Algorithmic Techniques in Formal Verification
- _id: 25863FF4-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11407
  name: Game Theory
- _id: 25892FC0-B435-11E9-9278-68D0E5697425
  grant_number: ICT15-003
  name: Efficient Algorithms for Computer Aided Verification
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
publication: Logical Methods in Computer Science
publication_identifier:
  issn:
  - 1860-5974
publication_status: published
publisher: International Federation for Computational Logic
publist_id: '7357'
pubrep_id: '956'
quality_controlled: '1'
related_material:
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scopus_import: '1'
status: public
title: Improved algorithms for parity and Streett objectives
tmp:
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  short: CC BY-ND (4.0)
type: journal_article
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volume: 13
year: '2017'
...
---
_id: '484'
abstract:
- lang: eng
  text: We consider the dynamics of a large quantum system of N identical bosons in
    3D interacting via a two-body potential of the form N3β-1w(Nβ(x - y)). For fixed
    0 = β &lt; 1/3 and large N, we obtain a norm approximation to the many-body evolution
    in the Nparticle Hilbert space. The leading order behaviour of the dynamics is
    determined by Hartree theory while the second order is given by Bogoliubov theory.
article_processing_charge: No
arxiv: 1
author:
- first_name: Phan
  full_name: Nam, Phan
  id: 404092F4-F248-11E8-B48F-1D18A9856A87
  last_name: Nam
- first_name: Marcin M
  full_name: Napiórkowski, Marcin M
  id: 4197AD04-F248-11E8-B48F-1D18A9856A87
  last_name: Napiórkowski
citation:
  ama: Nam P, Napiórkowski MM. Bogoliubov correction to the mean-field dynamics of
    interacting bosons. <i>Advances in Theoretical and Mathematical Physics</i>. 2017;21(3):683-738.
    doi:<a href="https://doi.org/10.4310/ATMP.2017.v21.n3.a4">10.4310/ATMP.2017.v21.n3.a4</a>
  apa: Nam, P., &#38; Napiórkowski, M. M. (2017). Bogoliubov correction to the mean-field
    dynamics of interacting bosons. <i>Advances in Theoretical and Mathematical Physics</i>.
    International Press of Boston. <a href="https://doi.org/10.4310/ATMP.2017.v21.n3.a4">https://doi.org/10.4310/ATMP.2017.v21.n3.a4</a>
  chicago: Nam, Phan, and Marcin M Napiórkowski. “Bogoliubov Correction to the Mean-Field
    Dynamics of Interacting Bosons.” <i>Advances in Theoretical and Mathematical Physics</i>.
    International Press of Boston, 2017. <a href="https://doi.org/10.4310/ATMP.2017.v21.n3.a4">https://doi.org/10.4310/ATMP.2017.v21.n3.a4</a>.
  ieee: P. Nam and M. M. Napiórkowski, “Bogoliubov correction to the mean-field dynamics
    of interacting bosons,” <i>Advances in Theoretical and Mathematical Physics</i>,
    vol. 21, no. 3. International Press of Boston, pp. 683–738, 2017.
  ista: Nam P, Napiórkowski MM. 2017. Bogoliubov correction to the mean-field dynamics
    of interacting bosons. Advances in Theoretical and Mathematical Physics. 21(3),
    683–738.
  mla: Nam, Phan, and Marcin M. Napiórkowski. “Bogoliubov Correction to the Mean-Field
    Dynamics of Interacting Bosons.” <i>Advances in Theoretical and Mathematical Physics</i>,
    vol. 21, no. 3, International Press of Boston, 2017, pp. 683–738, doi:<a href="https://doi.org/10.4310/ATMP.2017.v21.n3.a4">10.4310/ATMP.2017.v21.n3.a4</a>.
  short: P. Nam, M.M. Napiórkowski, Advances in Theoretical and Mathematical Physics
    21 (2017) 683–738.
das_tickbox: '1'
date_created: 2018-12-11T11:46:43Z
date_published: 2017-01-01T00:00:00Z
date_updated: 2026-07-06T13:34:16Z
day: '01'
department:
- _id: RoSe
doi: 10.4310/ATMP.2017.v21.n3.a4
ec_funded: 1
external_id:
  arxiv:
  - '1509.04631'
  isi:
  - '000409382300004'
intvolume: '        21'
isi: 1
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1509.04631
month: '01'
oa: 1
oa_version: Submitted Version
page: 683 - 738
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
- _id: 25C878CE-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P27533_N27
  name: Structure of the Excitation Spectrum for Many-Body Quantum Systems
publication: Advances in Theoretical and Mathematical Physics
publication_identifier:
  issn:
  - 1095-0761
publication_status: published
publisher: International Press of Boston
publist_id: '7336'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Bogoliubov correction to the mean-field dynamics of interacting bosons
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 21
year: '2017'
...
---
_id: '483'
abstract:
- lang: eng
  text: We prove the universality for the eigenvalue gap statistics in the bulk of
    the spectrum for band matrices, in the regime where the band width is comparable
    with the dimension of the matrix, W ~ N. All previous results concerning universality
    of non-Gaussian random matrices are for mean-field models. By relying on a new
    mean-field reduction technique, we deduce universality from quantum unique ergodicity
    for band matrices.
article_processing_charge: No
arxiv: 1
author:
- first_name: Paul
  full_name: Bourgade, Paul
  last_name: Bourgade
- first_name: László
  full_name: Erdös, László
  id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
  last_name: Erdös
  orcid: 0000-0001-5366-9603
- first_name: Horng
  full_name: Yau, Horng
  last_name: Yau
- first_name: Jun
  full_name: Yin, Jun
  last_name: Yin
citation:
  ama: Bourgade P, Erdös L, Yau H, Yin J. Universality for a class of random band
    matrices. <i>Advances in Theoretical and Mathematical Physics</i>. 2017;21(3):739-800.
    doi:<a href="https://doi.org/10.4310/ATMP.2017.v21.n3.a5">10.4310/ATMP.2017.v21.n3.a5</a>
  apa: Bourgade, P., Erdös, L., Yau, H., &#38; Yin, J. (2017). Universality for a
    class of random band matrices. <i>Advances in Theoretical and Mathematical Physics</i>.
    International Press of Boston. <a href="https://doi.org/10.4310/ATMP.2017.v21.n3.a5">https://doi.org/10.4310/ATMP.2017.v21.n3.a5</a>
  chicago: Bourgade, Paul, László Erdös, Horng Yau, and Jun Yin. “Universality for
    a Class of Random Band Matrices.” <i>Advances in Theoretical and Mathematical
    Physics</i>. International Press of Boston, 2017. <a href="https://doi.org/10.4310/ATMP.2017.v21.n3.a5">https://doi.org/10.4310/ATMP.2017.v21.n3.a5</a>.
  ieee: P. Bourgade, L. Erdös, H. Yau, and J. Yin, “Universality for a class of random
    band matrices,” <i>Advances in Theoretical and Mathematical Physics</i>, vol.
    21, no. 3. International Press of Boston, pp. 739–800, 2017.
  ista: Bourgade P, Erdös L, Yau H, Yin J. 2017. Universality for a class of random
    band matrices. Advances in Theoretical and Mathematical Physics. 21(3), 739–800.
  mla: Bourgade, Paul, et al. “Universality for a Class of Random Band Matrices.”
    <i>Advances in Theoretical and Mathematical Physics</i>, vol. 21, no. 3, International
    Press of Boston, 2017, pp. 739–800, doi:<a href="https://doi.org/10.4310/ATMP.2017.v21.n3.a5">10.4310/ATMP.2017.v21.n3.a5</a>.
  short: P. Bourgade, L. Erdös, H. Yau, J. Yin, Advances in Theoretical and Mathematical
    Physics 21 (2017) 739–800.
das_tickbox: '1'
date_created: 2018-12-11T11:46:43Z
date_published: 2017-08-25T00:00:00Z
date_updated: 2026-07-06T13:35:08Z
day: '25'
department:
- _id: LaEr
doi: 10.4310/ATMP.2017.v21.n3.a5
ec_funded: 1
external_id:
  arxiv:
  - '1602.02312'
  isi:
  - '000409382300005'
intvolume: '        21'
isi: 1
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1602.02312
month: '08'
oa: 1
oa_version: Submitted Version
page: 739 - 800
project:
- _id: 258DCDE6-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '338804'
  name: Random matrices, universality and disordered quantum systems
publication: Advances in Theoretical and Mathematical Physics
publication_identifier:
  issn:
  - 1095-0761
publication_status: published
publisher: International Press of Boston
publist_id: '7337'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Universality for a class of random band matrices
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 21
year: '2017'
...
---
_id: '1000'
abstract:
- lang: eng
  text: 'We study probabilistic models of natural images and extend the autoregressive
    family of PixelCNN models by incorporating latent variables. Subsequently, we
    describe two new generative image models that exploit different image transformations
    as latent variables: a quantized grayscale view of the image or a multi-resolution
    image pyramid. The proposed models tackle two known shortcomings of existing PixelCNN
    models: 1) their tendency to focus on low-level image details, while largely ignoring
    high-level image information, such as object shapes, and 2) their computationally
    costly procedure for image sampling. We experimentally demonstrate benefits of
    our LatentPixelCNN models, in particular showing that they produce much more realistically
    looking image samples than previous state-of-the-art probabilistic models. '
acknowledgement: We thank Tim Salimans for spotting a mistake in our preliminary arXiv
  manuscript. This work was funded by the European Research Council under the European
  Unions Seventh Framework Programme (FP7/2007-2013)/ERC grant agreement no 308036.
article_processing_charge: No
arxiv: 1
author:
- first_name: Alexander
  full_name: Kolesnikov, Alexander
  id: 2D157DB6-F248-11E8-B48F-1D18A9856A87
  last_name: Kolesnikov
- first_name: Christoph
  full_name: Lampert, Christoph
  id: 40C20FD2-F248-11E8-B48F-1D18A9856A87
  last_name: Lampert
  orcid: 0000-0001-8622-7887
citation:
  ama: 'Kolesnikov A, Lampert C. PixelCNN models with auxiliary variables for natural
    image modeling. In: <i>34th International Conference on Machine Learning</i>.
    Vol 70. Journal of Machine Learning Research; 2017:1905-1914.'
  apa: 'Kolesnikov, A., &#38; Lampert, C. (2017). PixelCNN models with auxiliary variables
    for natural image modeling. In <i>34th International Conference on Machine Learning</i>
    (Vol. 70, pp. 1905–1914). Sydney, Australia: Journal of Machine Learning Research.'
  chicago: Kolesnikov, Alexander, and Christoph Lampert. “PixelCNN Models with Auxiliary
    Variables for Natural Image Modeling.” In <i>34th International Conference on
    Machine Learning</i>, 70:1905–14. Journal of Machine Learning Research, 2017.
  ieee: A. Kolesnikov and C. Lampert, “PixelCNN models with auxiliary variables for
    natural image modeling,” in <i>34th International Conference on Machine Learning</i>,
    Sydney, Australia, 2017, vol. 70, pp. 1905–1914.
  ista: 'Kolesnikov A, Lampert C. 2017. PixelCNN models with auxiliary variables for
    natural image modeling. 34th International Conference on Machine Learning. ICML:
    International Conference on Machine Learning vol. 70, 1905–1914.'
  mla: Kolesnikov, Alexander, and Christoph Lampert. “PixelCNN Models with Auxiliary
    Variables for Natural Image Modeling.” <i>34th International Conference on Machine
    Learning</i>, vol. 70, Journal of Machine Learning Research, 2017, pp. 1905–14.
  short: A. Kolesnikov, C. Lampert, in:, 34th International Conference on Machine
    Learning, Journal of Machine Learning Research, 2017, pp. 1905–1914.
conference:
  end_date: 2017-08-11
  location: Sydney, Australia
  name: 'ICML: International Conference on Machine Learning'
  start_date: 2017-08-06
das_tickbox: '1'
date_created: 2018-12-11T11:49:37Z
date_published: 2017-08-01T00:00:00Z
date_updated: 2026-07-06T13:41:23Z
day: '01'
department:
- _id: ChLa
ec_funded: 1
external_id:
  arxiv:
  - '1612.08185'
  isi:
  - '000683309501102'
has_accepted_license: '1'
intvolume: '        70'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1612.08185
month: '08'
oa: 1
oa_version: Submitted Version
page: 1905 - 1914
project:
- _id: 2532554C-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '308036'
  name: Lifelong Learning of Visual Scene Understanding
publication: 34th International Conference on Machine Learning
publication_identifier:
  isbn:
  - 978-151085514-4
publication_status: published
publisher: Journal of Machine Learning Research
publist_id: '6398'
quality_controlled: '1'
scopus_import: '1'
status: public
title: PixelCNN models with auxiliary variables for natural image modeling
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 70
year: '2017'
...
---
_id: '568'
abstract:
- lang: eng
  text: 'We study robust properties of zero sets of continuous maps f: X → ℝn. Formally,
    we analyze the family Z&lt; r(f) := (g-1(0): ||g - f|| &lt; r) of all zero sets
    of all continuous maps g closer to f than r in the max-norm. All of these sets
    are outside A := (x: |f(x)| ≥ r) and we claim that Z&lt; r(f) is fully determined
    by A and an element of a certain cohomotopy group which (by a recent result) is
    computable whenever the dimension of X is at most 2n - 3. By considering all r
    &gt; 0 simultaneously, the pointed cohomotopy groups form a persistence module-a
    structure leading to persistence diagrams as in the case of persistent homology
    or well groups. Eventually, we get a descriptor of persistent robust properties
    of zero sets that has better descriptive power (Theorem A) and better computability
    status (Theorem B) than the established well diagrams. Moreover, if we endow every
    point of each zero set with gradients of the perturbation, the robust description
    of the zero sets by elements of cohomotopy groups is in some sense the best possible
    (Theorem C).'
article_processing_charge: No
arxiv: 1
author:
- first_name: Peter
  full_name: Franek, Peter
  id: 473294AE-F248-11E8-B48F-1D18A9856A87
  last_name: Franek
  orcid: 0000-0001-8878-8397
- first_name: Marek
  full_name: Krcál, Marek
  id: 33E21118-F248-11E8-B48F-1D18A9856A87
  last_name: Krcál
citation:
  ama: Franek P, Krcál M. Persistence of zero sets. <i>Homology, Homotopy and Applications</i>.
    2017;19(2):313-342. doi:<a href="https://doi.org/10.4310/HHA.2017.v19.n2.a16">10.4310/HHA.2017.v19.n2.a16</a>
  apa: Franek, P., &#38; Krcál, M. (2017). Persistence of zero sets. <i>Homology,
    Homotopy and Applications</i>. International Press of Boston. <a href="https://doi.org/10.4310/HHA.2017.v19.n2.a16">https://doi.org/10.4310/HHA.2017.v19.n2.a16</a>
  chicago: Franek, Peter, and Marek Krcál. “Persistence of Zero Sets.” <i>Homology,
    Homotopy and Applications</i>. International Press of Boston, 2017. <a href="https://doi.org/10.4310/HHA.2017.v19.n2.a16">https://doi.org/10.4310/HHA.2017.v19.n2.a16</a>.
  ieee: P. Franek and M. Krcál, “Persistence of zero sets,” <i>Homology, Homotopy
    and Applications</i>, vol. 19, no. 2. International Press of Boston, pp. 313–342,
    2017.
  ista: Franek P, Krcál M. 2017. Persistence of zero sets. Homology, Homotopy and
    Applications. 19(2), 313–342.
  mla: Franek, Peter, and Marek Krcál. “Persistence of Zero Sets.” <i>Homology, Homotopy
    and Applications</i>, vol. 19, no. 2, International Press of Boston, 2017, pp.
    313–42, doi:<a href="https://doi.org/10.4310/HHA.2017.v19.n2.a16">10.4310/HHA.2017.v19.n2.a16</a>.
  short: P. Franek, M. Krcál, Homology, Homotopy and Applications 19 (2017) 313–342.
corr_author: '1'
das_tickbox: '1'
date_created: 2018-12-11T11:47:14Z
date_published: 2017-01-01T00:00:00Z
date_updated: 2026-07-06T13:38:28Z
day: '01'
department:
- _id: UlWa
- _id: HeEd
doi: 10.4310/HHA.2017.v19.n2.a16
ec_funded: 1
external_id:
  arxiv:
  - '1507.04310'
  isi:
  - '000440749400010'
intvolume: '        19'
isi: 1
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1507.04310
month: '01'
oa: 1
oa_version: Submitted Version
page: 313 - 342
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
- _id: 2590DB08-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '701309'
  name: Atomic Resolution Structures of Mitochondrial Respiratory Chain Supercomplexes
publication: Homology, Homotopy and Applications
publication_identifier:
  issn:
  - 1532-0073
publication_status: published
publisher: International Press of Boston
publist_id: '7246'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Persistence of zero sets
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 19
year: '2017'
...
---
_id: '701'
abstract:
- lang: eng
  text: A d-dimensional simplex S is called a k-reptile (or a k-reptile simplex) if
    it can be tiled by k simplices with disjoint interiors that are all mutually congruent
    and similar to S. For d = 2, triangular k-reptiles exist for all k of the form
    a^2, 3a^2 or a^2+b^2 and they have been completely characterized by Snover, Waiveris,
    and Williams. On the other hand, the only k-reptile simplices that are known for
    d ≥ 3, have k = m^d, where m is a positive integer. We substantially simplify
    the proof by Matoušek and the second author that for d = 3, k-reptile tetrahedra
    can exist only for k = m^3. We then prove a weaker analogue of this result for
    d = 4 by showing that four-dimensional k-reptile simplices can exist only for
    k = m^2.
article_processing_charge: No
author:
- first_name: Jan
  full_name: Kynčl, Jan
  last_name: Kynčl
- first_name: Zuzana
  full_name: Patakova, Zuzana
  id: 48B57058-F248-11E8-B48F-1D18A9856A87
  last_name: Patakova
  orcid: 0000-0002-3975-1683
citation:
  ama: Kynčl J, Patakova Z. On the nonexistence of k reptile simplices in ℝ^3 and
    ℝ^4. <i>The Electronic Journal of Combinatorics</i>. 2017;24(3):1-44.
  apa: Kynčl, J., &#38; Patakova, Z. (2017). On the nonexistence of k reptile simplices
    in ℝ^3 and ℝ^4. <i>The Electronic Journal of Combinatorics</i>. International
    Press of Boston.
  chicago: Kynčl, Jan, and Zuzana Patakova. “On the Nonexistence of k Reptile Simplices
    in ℝ^3 and ℝ^4.” <i>The Electronic Journal of Combinatorics</i>. International
    Press of Boston, 2017.
  ieee: J. Kynčl and Z. Patakova, “On the nonexistence of k reptile simplices in ℝ^3
    and ℝ^4,” <i>The Electronic Journal of Combinatorics</i>, vol. 24, no. 3. International
    Press of Boston, pp. 1–44, 2017.
  ista: Kynčl J, Patakova Z. 2017. On the nonexistence of k reptile simplices in ℝ^3
    and ℝ^4. The Electronic Journal of Combinatorics. 24(3), 1–44.
  mla: Kynčl, Jan, and Zuzana Patakova. “On the Nonexistence of k Reptile Simplices
    in ℝ^3 and ℝ^4.” <i>The Electronic Journal of Combinatorics</i>, vol. 24, no.
    3, International Press of Boston, 2017, pp. 1–44.
  short: J. Kynčl, Z. Patakova, The Electronic Journal of Combinatorics 24 (2017)
    1–44.
corr_author: '1'
das_tickbox: '1'
date_created: 2018-12-11T11:48:00Z
date_published: 2017-07-14T00:00:00Z
date_updated: 2026-07-06T13:38:44Z
day: '14'
ddc:
- '500'
department:
- _id: UlWa
file:
- access_level: open_access
  checksum: a431e573e31df13bc0f66de3061006ec
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:14:25Z
  date_updated: 2020-07-14T12:47:47Z
  file_id: '5077'
  file_name: IST-2018-984-v1+1_Patakova_on_the_nonexistence_of_k-reptile_simplices_in_R_3_and_R_4_2017.pdf
  file_size: 544042
  relation: main_file
file_date_updated: 2020-07-14T12:47:47Z
has_accepted_license: '1'
intvolume: '        24'
issue: '3'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Submitted Version
page: 1-44
publication: The Electronic Journal of Combinatorics
publication_identifier:
  issn:
  - 1077-8926
publication_status: published
publisher: International Press of Boston
publist_id: '6996'
pubrep_id: '984'
quality_controlled: '1'
status: public
title: On the nonexistence of k reptile simplices in ℝ^3 and ℝ^4
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 24
year: '2017'
...
---
_id: '951'
abstract:
- lang: eng
  text: Dengue-suppressing Wolbachia strains are promising tools for arbovirus control,
    particularly as they have the potential to self-spread following local introductions.
    To test this, we followed the frequency of the transinfected Wolbachia strain
    wMel through Ae. aegypti in Cairns, Australia, following releases at 3 nonisolated
    locations within the city in early 2013. Spatial spread was analysed graphically
    using interpolation and by fitting a statistical model describing the position
    and width of the wave. For the larger 2 of the 3 releases (covering 0.97 km2 and
    0.52 km2), we observed slow but steady spatial spread, at about 100–200 m per
    year, roughly consistent with theoretical predictions. In contrast, the smallest
    release (0.11 km2) produced erratic temporal and spatial dynamics, with little
    evidence of spread after 2 years. This is consistent with the prediction concerning
    fitness-decreasing Wolbachia transinfections that a minimum release area is needed
    to achieve stable local establishment and spread in continuous habitats. Our graphical
    and likelihood analyses produced broadly consistent estimates of wave speed and
    wave width. Spread at all sites was spatially heterogeneous, suggesting that environmental
    heterogeneity will affect large-scale Wolbachia transformations of urban mosquito
    populations. The persistence and spread of Wolbachia in release areas meeting
    minimum area requirements indicates the promise of successful large-scale population
    transfo
article_number: e2001894
article_processing_charge: No
author:
- first_name: Tom
  full_name: Schmidt, Tom
  last_name: Schmidt
- first_name: Nicholas H
  full_name: Barton, Nicholas H
  id: 4880FE40-F248-11E8-B48F-1D18A9856A87
  last_name: Barton
  orcid: 0000-0002-8548-5240
- first_name: Gordana
  full_name: Rasic, Gordana
  last_name: Rasic
- first_name: Andrew
  full_name: Turley, Andrew
  last_name: Turley
- first_name: Brian
  full_name: Montgomery, Brian
  last_name: Montgomery
- first_name: Inaki
  full_name: Iturbe Ormaetxe, Inaki
  last_name: Iturbe Ormaetxe
- first_name: Peter
  full_name: Cook, Peter
  last_name: Cook
- first_name: Peter
  full_name: Ryan, Peter
  last_name: Ryan
- first_name: Scott
  full_name: Ritchie, Scott
  last_name: Ritchie
- first_name: Ary
  full_name: Hoffmann, Ary
  last_name: Hoffmann
- first_name: Scott
  full_name: O’Neill, Scott
  last_name: O’Neill
- first_name: Michael
  full_name: Turelli, Michael
  last_name: Turelli
citation:
  ama: Schmidt T, Barton NH, Rasic G, et al. Local introduction and heterogeneous
    spatial spread of dengue-suppressing Wolbachia through an urban population of
    Aedes Aegypti. <i>PLoS Biology</i>. 2017;15(5). doi:<a href="https://doi.org/10.1371/journal.pbio.2001894">10.1371/journal.pbio.2001894</a>
  apa: Schmidt, T., Barton, N. H., Rasic, G., Turley, A., Montgomery, B., Iturbe Ormaetxe,
    I., … Turelli, M. (2017). Local introduction and heterogeneous spatial spread
    of dengue-suppressing Wolbachia through an urban population of Aedes Aegypti.
    <i>PLoS Biology</i>. Public Library of Science. <a href="https://doi.org/10.1371/journal.pbio.2001894">https://doi.org/10.1371/journal.pbio.2001894</a>
  chicago: Schmidt, Tom, Nicholas H Barton, Gordana Rasic, Andrew Turley, Brian Montgomery,
    Inaki Iturbe Ormaetxe, Peter Cook, et al. “Local Introduction and Heterogeneous
    Spatial Spread of Dengue-Suppressing Wolbachia through an Urban Population of
    Aedes Aegypti.” <i>PLoS Biology</i>. Public Library of Science, 2017. <a href="https://doi.org/10.1371/journal.pbio.2001894">https://doi.org/10.1371/journal.pbio.2001894</a>.
  ieee: T. Schmidt <i>et al.</i>, “Local introduction and heterogeneous spatial spread
    of dengue-suppressing Wolbachia through an urban population of Aedes Aegypti,”
    <i>PLoS Biology</i>, vol. 15, no. 5. Public Library of Science, 2017.
  ista: Schmidt T, Barton NH, Rasic G, Turley A, Montgomery B, Iturbe Ormaetxe I,
    Cook P, Ryan P, Ritchie S, Hoffmann A, O’Neill S, Turelli M. 2017. Local introduction
    and heterogeneous spatial spread of dengue-suppressing Wolbachia through an urban
    population of Aedes Aegypti. PLoS Biology. 15(5), e2001894.
  mla: Schmidt, Tom, et al. “Local Introduction and Heterogeneous Spatial Spread of
    Dengue-Suppressing Wolbachia through an Urban Population of Aedes Aegypti.” <i>PLoS
    Biology</i>, vol. 15, no. 5, e2001894, Public Library of Science, 2017, doi:<a
    href="https://doi.org/10.1371/journal.pbio.2001894">10.1371/journal.pbio.2001894</a>.
  short: T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe,
    P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, PLoS Biology
    15 (2017).
date_created: 2018-12-11T11:49:22Z
date_published: 2017-05-30T00:00:00Z
date_updated: 2026-07-06T13:53:54Z
day: '30'
ddc:
- '576'
department:
- _id: NiBa
doi: 10.1371/journal.pbio.2001894
external_id:
  isi:
  - '000402520000012'
file:
- access_level: open_access
  checksum: 107d290bd1159ec77b734eb2824b01c8
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:08:30Z
  date_updated: 2020-07-14T12:48:16Z
  file_id: '4691'
  file_name: IST-2017-843-v1+1_journal.pbio.2001894.pdf
  file_size: 5541206
  relation: main_file
file_date_updated: 2020-07-14T12:48:16Z
has_accepted_license: '1'
intvolume: '        15'
isi: 1
issue: '5'
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
publication: PLoS Biology
publication_identifier:
  issn:
  - 1544-9173
publication_status: published
publisher: Public Library of Science
publist_id: '6464'
pubrep_id: '843'
quality_controlled: '1'
related_material:
  record:
  - id: '9856'
    relation: research_data
    status: public
  - id: '9858'
    relation: research_data
    status: public
  - id: '9857'
    relation: research_data
    status: public
scopus_import: '1'
status: public
title: Local introduction and heterogeneous spatial spread of dengue-suppressing Wolbachia
  through an urban population of Aedes Aegypti
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 15
year: '2017'
...
---
_id: '9857'
article_processing_charge: No
author:
- first_name: Tom
  full_name: Schmidt, Tom
  last_name: Schmidt
- first_name: Nicholas H
  full_name: Barton, Nicholas H
  id: 4880FE40-F248-11E8-B48F-1D18A9856A87
  last_name: Barton
  orcid: 0000-0002-8548-5240
- first_name: Gordana
  full_name: Rasic, Gordana
  last_name: Rasic
- first_name: Andrew
  full_name: Turley, Andrew
  last_name: Turley
- first_name: Brian
  full_name: Montgomery, Brian
  last_name: Montgomery
- first_name: Inaki
  full_name: Iturbe Ormaetxe, Inaki
  last_name: Iturbe Ormaetxe
- first_name: Peter
  full_name: Cook, Peter
  last_name: Cook
- first_name: Peter
  full_name: Ryan, Peter
  last_name: Ryan
- first_name: Scott
  full_name: Ritchie, Scott
  last_name: Ritchie
- first_name: Ary
  full_name: Hoffmann, Ary
  last_name: Hoffmann
- first_name: Scott
  full_name: O’Neill, Scott
  last_name: O’Neill
- first_name: Michael
  full_name: Turelli, Michael
  last_name: Turelli
citation:
  ama: Schmidt T, Barton NH, Rasic G, et al. Supporting information concerning observed
    wMel frequencies and analyses of habitat variables. 2017. doi:<a href="https://doi.org/10.1371/journal.pbio.2001894.s015">10.1371/journal.pbio.2001894.s015</a>
  apa: Schmidt, T., Barton, N. H., Rasic, G., Turley, A., Montgomery, B., Iturbe Ormaetxe,
    I., … Turelli, M. (2017). Supporting information concerning observed wMel frequencies
    and analyses of habitat variables. Public Library of Science. <a href="https://doi.org/10.1371/journal.pbio.2001894.s015">https://doi.org/10.1371/journal.pbio.2001894.s015</a>
  chicago: Schmidt, Tom, Nicholas H Barton, Gordana Rasic, Andrew Turley, Brian Montgomery,
    Inaki Iturbe Ormaetxe, Peter Cook, et al. “Supporting Information Concerning Observed
    WMel Frequencies and Analyses of Habitat Variables.” Public Library of Science,
    2017. <a href="https://doi.org/10.1371/journal.pbio.2001894.s015">https://doi.org/10.1371/journal.pbio.2001894.s015</a>.
  ieee: T. Schmidt <i>et al.</i>, “Supporting information concerning observed wMel
    frequencies and analyses of habitat variables.” Public Library of Science, 2017.
  ista: Schmidt T, Barton NH, Rasic G, Turley A, Montgomery B, Iturbe Ormaetxe I,
    Cook P, Ryan P, Ritchie S, Hoffmann A, O’Neill S, Turelli M. 2017. Supporting
    information concerning observed wMel frequencies and analyses of habitat variables,
    Public Library of Science, <a href="https://doi.org/10.1371/journal.pbio.2001894.s015">10.1371/journal.pbio.2001894.s015</a>.
  mla: Schmidt, Tom, et al. <i>Supporting Information Concerning Observed WMel Frequencies
    and Analyses of Habitat Variables</i>. Public Library of Science, 2017, doi:<a
    href="https://doi.org/10.1371/journal.pbio.2001894.s015">10.1371/journal.pbio.2001894.s015</a>.
  short: T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe,
    P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, (2017).
date_created: 2021-08-10T07:41:52Z
date_published: 2017-05-30T00:00:00Z
date_updated: 2026-07-06T13:53:55Z
day: '30'
department:
- _id: NiBa
doi: 10.1371/journal.pbio.2001894.s015
month: '05'
oa_version: Published Version
publisher: Public Library of Science
related_material:
  record:
  - id: '951'
    relation: used_in_publication
    status: public
status: public
title: Supporting information concerning observed wMel frequencies and analyses of
  habitat variables
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2017'
...
---
_id: '604'
abstract:
- lang: eng
  text: In several settings of physics and chemistry one has to deal with molecules
    interacting with some kind of an external environment, be it a gas, a solution,
    or a crystal surface. Understanding molecular processes in the presence of such
    a many-particle bath is inherently challenging, and usually requires large-scale
    numerical computations. Here, we present an alternative approach to the problem,
    based on the notion of the angulon quasiparticle. We show that molecules rotating
    inside superfluid helium nanodroplets and Bose–Einstein condensates form angulons,
    and therefore can be described by straightforward solutions of a simple microscopic
    Hamiltonian. Casting the problem in the language of angulons allows us not only
    to greatly simplify it, but also to gain insights into the origins of the observed
    phenomena and to make predictions for future experimental studies.
alternative_title:
- Theoretical and Computational Chemistry Series
article_processing_charge: No
arxiv: 1
author:
- first_name: Mikhail
  full_name: Lemeshko, Mikhail
  id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
  last_name: Lemeshko
  orcid: 0000-0002-6990-7802
- first_name: Richard
  full_name: Schmidt, Richard
  last_name: Schmidt
citation:
  ama: 'Lemeshko M, Schmidt R. Molecular impurities interacting with a many-particle
    environment: From ultracold gases to helium nanodroplets. In: Dulieu O, Osterwalder
    A, eds. <i>Cold Chemistry: Molecular Scattering and Reactivity Near Absolute Zero
    </i>. Vol 11. Theoretical and Computational Chemistry Series. Royal Society of
    Chemistry; 2017:444-495. doi:<a href="https://doi.org/10.1039/9781782626800-00444">10.1039/9781782626800-00444</a>'
  apa: 'Lemeshko, M., &#38; Schmidt, R. (2017). Molecular impurities interacting with
    a many-particle environment: From ultracold gases to helium nanodroplets. In O.
    Dulieu &#38; A. Osterwalder (Eds.), <i>Cold Chemistry: Molecular Scattering and
    Reactivity Near Absolute Zero </i> (Vol. 11, pp. 444–495). Royal Society of Chemistry.
    <a href="https://doi.org/10.1039/9781782626800-00444">https://doi.org/10.1039/9781782626800-00444</a>'
  chicago: 'Lemeshko, Mikhail, and Richard Schmidt. “Molecular Impurities Interacting
    with a Many-Particle Environment: From Ultracold Gases to Helium Nanodroplets.”
    In <i>Cold Chemistry: Molecular Scattering and Reactivity Near Absolute Zero </i>,
    edited by Oliver Dulieu and Andreas Osterwalder, 11:444–95. Theoretical and Computational
    Chemistry Series. Royal Society of Chemistry, 2017. <a href="https://doi.org/10.1039/9781782626800-00444">https://doi.org/10.1039/9781782626800-00444</a>.'
  ieee: 'M. Lemeshko and R. Schmidt, “Molecular impurities interacting with a many-particle
    environment: From ultracold gases to helium nanodroplets,” in <i>Cold Chemistry:
    Molecular Scattering and Reactivity Near Absolute Zero </i>, vol. 11, O. Dulieu
    and A. Osterwalder, Eds. Royal Society of Chemistry, 2017, pp. 444–495.'
  ista: 'Lemeshko M, Schmidt R. 2017.Molecular impurities interacting with a many-particle
    environment: From ultracold gases to helium nanodroplets. In: Cold Chemistry:
    Molecular Scattering and Reactivity Near Absolute Zero . Theoretical and Computational
    Chemistry Series, vol. 11, 444–495.'
  mla: 'Lemeshko, Mikhail, and Richard Schmidt. “Molecular Impurities Interacting
    with a Many-Particle Environment: From Ultracold Gases to Helium Nanodroplets.”
    <i>Cold Chemistry: Molecular Scattering and Reactivity Near Absolute Zero </i>,
    edited by Oliver Dulieu and Andreas Osterwalder, vol. 11, Royal Society of Chemistry,
    2017, pp. 444–95, doi:<a href="https://doi.org/10.1039/9781782626800-00444">10.1039/9781782626800-00444</a>.'
  short: 'M. Lemeshko, R. Schmidt, in:, O. Dulieu, A. Osterwalder (Eds.), Cold Chemistry:
    Molecular Scattering and Reactivity Near Absolute Zero , Royal Society of Chemistry,
    2017, pp. 444–495.'
das_tickbox: '1'
date_created: 2018-12-11T11:47:27Z
date_published: 2017-12-14T00:00:00Z
date_updated: 2026-07-07T05:50:51Z
day: '14'
department:
- _id: MiLe
doi: 10.1039/9781782626800-00444
editor:
- first_name: Oliver
  full_name: Dulieu, Oliver
  last_name: Dulieu
- first_name: Andreas
  full_name: Osterwalder, Andreas
  last_name: Osterwalder
external_id:
  arxiv:
  - '1703.06753'
intvolume: '        11'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1703.06753
month: '12'
oa: 1
oa_version: Submitted Version
page: 444 - 495
publication: 'Cold Chemistry: Molecular Scattering and Reactivity Near Absolute Zero '
publication_identifier:
  issn:
  - 2041-3181
publication_status: published
publisher: Royal Society of Chemistry
publist_id: '7201'
quality_controlled: '1'
scopus_import: '1'
series_title: Theoretical and Computational Chemistry Series
status: public
title: 'Molecular impurities interacting with a many-particle environment: From ultracold
  gases to helium nanodroplets'
type: book_chapter
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 11
year: '2017'
...
---
_id: '807'
abstract:
- lang: eng
  text: 'On January the 1st, 2016 a new agreement between 32 Austrian scientific libraries
    and the publisher Springer took its effect: this deal covers accessing the licensed
    content on the one hand, and publishing open access on the other hand. More than
    1000 papers by Austrian authors were published open access at Springer in the
    first year alone. The working group &quot;Springer Compact Evaluierung&quot; made
    the data for these articles available via the platform OpenAPC and would like
    to use this opportunity to give a short account of what this publishing agreement
    actually entails and the working group intends to do.'
article_processing_charge: No
author:
- first_name: Magdalena
  full_name: Andrae, Magdalena
  last_name: Andrae
- first_name: Márton
  full_name: Villányi, Márton
  id: 3FFCCD3A-F248-11E8-B48F-1D18A9856A87
  last_name: Villányi
  orcid: 0000-0001-8126-0426
citation:
  ama: Andrae M, Villányi M. Der Springer Compact-Deal – Ein erster Einblick in die
    Evaluierung einer Offsetting-Vereinbarung. <i>Mitteilungen der Vereinigung Österreichischer
    Bibliothekarinnen und Bibliothekare</i>. 2017;70(2):274-280. doi:<a href="https://doi.org/10.31263/voebm.v70i2.1898">10.31263/voebm.v70i2.1898</a>
  apa: Andrae, M., &#38; Villányi, M. (2017). Der Springer Compact-Deal – Ein erster
    Einblick in die Evaluierung einer Offsetting-Vereinbarung. <i>Mitteilungen Der
    Vereinigung Österreichischer Bibliothekarinnen Und Bibliothekare</i>. Vereinigung
    Österreichischer Bibliothekarinnen und Bibliothekare. <a href="https://doi.org/10.31263/voebm.v70i2.1898">https://doi.org/10.31263/voebm.v70i2.1898</a>
  chicago: Andrae, Magdalena, and Márton Villányi. “Der Springer Compact-Deal – Ein
    Erster Einblick in Die Evaluierung Einer Offsetting-Vereinbarung.” <i>Mitteilungen
    Der Vereinigung Österreichischer Bibliothekarinnen Und Bibliothekare</i>. Vereinigung
    Österreichischer Bibliothekarinnen und Bibliothekare, 2017. <a href="https://doi.org/10.31263/voebm.v70i2.1898">https://doi.org/10.31263/voebm.v70i2.1898</a>.
  ieee: M. Andrae and M. Villányi, “Der Springer Compact-Deal – Ein erster Einblick
    in die Evaluierung einer Offsetting-Vereinbarung,” <i>Mitteilungen der Vereinigung
    Österreichischer Bibliothekarinnen und Bibliothekare</i>, vol. 70, no. 2. Vereinigung
    Österreichischer Bibliothekarinnen und Bibliothekare, pp. 274–280, 2017.
  ista: Andrae M, Villányi M. 2017. Der Springer Compact-Deal – Ein erster Einblick
    in die Evaluierung einer Offsetting-Vereinbarung. Mitteilungen der Vereinigung
    Österreichischer Bibliothekarinnen und Bibliothekare. 70(2), 274–280.
  mla: Andrae, Magdalena, and Márton Villányi. “Der Springer Compact-Deal – Ein Erster
    Einblick in Die Evaluierung Einer Offsetting-Vereinbarung.” <i>Mitteilungen Der
    Vereinigung Österreichischer Bibliothekarinnen Und Bibliothekare</i>, vol. 70,
    no. 2, Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare, 2017,
    pp. 274–80, doi:<a href="https://doi.org/10.31263/voebm.v70i2.1898">10.31263/voebm.v70i2.1898</a>.
  short: M. Andrae, M. Villányi, Mitteilungen Der Vereinigung Österreichischer Bibliothekarinnen
    Und Bibliothekare 70 (2017) 274–280.
das_tickbox: '1'
date_created: 2018-12-11T11:48:36Z
date_published: 2017-08-01T00:00:00Z
date_updated: 2026-07-07T06:08:32Z
day: '01'
ddc:
- '020'
department:
- _id: E-Lib
doi: 10.31263/voebm.v70i2.1898
file:
- access_level: open_access
  checksum: 558c18bcf5580d87dd371ec626d52075
  content_type: application/pdf
  creator: dernst
  date_created: 2019-01-18T13:39:26Z
  date_updated: 2020-07-14T12:48:09Z
  file_id: '5851'
  file_name: 2017_VOEB_Andrae.pdf
  file_size: 125065
  relation: main_file
file_date_updated: 2020-07-14T12:48:09Z
has_accepted_license: '1'
intvolume: '        70'
issue: '2'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: 274 - 280
popular_science: '1'
publication: Mitteilungen der Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare
publication_identifier:
  issn:
  - 1022-2588
publication_status: published
publisher: Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare
publist_id: '6843'
scopus_import: '1'
status: public
title: Der Springer Compact-Deal – Ein erster Einblick in die Evaluierung einer Offsetting-Vereinbarung
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 70
year: '2017'
...
---
_id: '825'
abstract:
- lang: eng
  text: What data is needed about data? Describing the process to answer this question
    for the institutional data repository IST DataRep.
article_processing_charge: No
author:
- first_name: Barbara
  full_name: Petritsch, Barbara
  id: 406048EC-F248-11E8-B48F-1D18A9856A87
  last_name: Petritsch
  orcid: 0000-0003-2724-4614
citation:
  ama: Petritsch B. Metadata for research data in practice. <i>Mitteilungen der Vereinigung
    Österreichischer Bibliothekarinnen &#38; Bibliothekare</i>. 2017;70(2):200-207.
    doi:<a href="https://doi.org/10.31263/voebm.v70i2.1678">10.31263/voebm.v70i2.1678</a>
  apa: Petritsch, B. (2017). Metadata for research data in practice. <i>Mitteilungen
    Der Vereinigung Österreichischer Bibliothekarinnen &#38; Bibliothekare</i>. Vereinigung
    Österreichischer Bibliothekarinnen und Bibliothekare. <a href="https://doi.org/10.31263/voebm.v70i2.1678">https://doi.org/10.31263/voebm.v70i2.1678</a>
  chicago: Petritsch, Barbara. “Metadata for Research Data in Practice.” <i>Mitteilungen
    Der Vereinigung Österreichischer Bibliothekarinnen &#38; Bibliothekare</i>. Vereinigung
    Österreichischer Bibliothekarinnen und Bibliothekare, 2017. <a href="https://doi.org/10.31263/voebm.v70i2.1678">https://doi.org/10.31263/voebm.v70i2.1678</a>.
  ieee: B. Petritsch, “Metadata for research data in practice,” <i>Mitteilungen der
    Vereinigung Österreichischer Bibliothekarinnen &#38; Bibliothekare</i>, vol. 70,
    no. 2. Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare, pp. 200–207,
    2017.
  ista: Petritsch B. 2017. Metadata for research data in practice. Mitteilungen der
    Vereinigung Österreichischer Bibliothekarinnen &#38; Bibliothekare. 70(2), 200–207.
  mla: Petritsch, Barbara. “Metadata for Research Data in Practice.” <i>Mitteilungen
    Der Vereinigung Österreichischer Bibliothekarinnen &#38; Bibliothekare</i>, vol.
    70, no. 2, Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare, 2017,
    pp. 200–07, doi:<a href="https://doi.org/10.31263/voebm.v70i2.1678">10.31263/voebm.v70i2.1678</a>.
  short: B. Petritsch, Mitteilungen Der Vereinigung Österreichischer Bibliothekarinnen
    &#38; Bibliothekare 70 (2017) 200–207.
corr_author: '1'
das_tickbox: '1'
date_created: 2018-12-11T11:48:42Z
date_published: 2017-08-01T00:00:00Z
date_updated: 2026-07-07T06:11:18Z
day: '01'
ddc:
- '020'
department:
- _id: E-Lib
doi: 10.31263/voebm.v70i2.1678
file:
- access_level: open_access
  checksum: 7c4544d07efa2c2add8612b489abb4e2
  content_type: application/pdf
  creator: dernst
  date_created: 2019-01-18T13:32:17Z
  date_updated: 2020-07-14T12:48:11Z
  file_id: '5850'
  file_name: 2017_VOEB_Petritsch.pdf
  file_size: 7843975
  relation: main_file
file_date_updated: 2020-07-14T12:48:11Z
has_accepted_license: '1'
intvolume: '        70'
issue: '2'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: 200 - 207
publication: Mitteilungen der Vereinigung Österreichischer Bibliothekarinnen & Bibliothekare
publication_identifier:
  issn:
  - 1022-2588
publication_status: published
publisher: Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare
publist_id: '6823'
scopus_import: '1'
status: public
title: Metadata for research data in practice
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 70
year: '2017'
...
---
_id: '823'
abstract:
- lang: eng
  text: The resolution of a linear system with positive integer variables is a basic
    yet difficult computational problem with many applications. We consider sparse
    uncorrelated random systems parametrised by the density c and the ratio α=N/M
    between number of variables N and number of constraints M. By means of ensemble
    calculations we show that the space of feasible solutions endows a Van-Der-Waals
    phase diagram in the plane (c, α). We give numerical evidence that the associated
    computational problems become more difficult across the critical point and in
    particular in the coexistence region.
article_number: '093404'
article_processing_charge: No
arxiv: 1
author:
- first_name: Simona
  full_name: Colabrese, Simona
  last_name: Colabrese
- first_name: Daniele
  full_name: De Martino, Daniele
  id: 3FF5848A-F248-11E8-B48F-1D18A9856A87
  last_name: De Martino
  orcid: 0000-0002-5214-4706
- first_name: Luca
  full_name: Leuzzi, Luca
  last_name: Leuzzi
- first_name: Enzo
  full_name: Marinari, Enzo
  last_name: Marinari
citation:
  ama: 'Colabrese S, De Martino D, Leuzzi L, Marinari E. Phase transitions in integer
    linear problems. <i>Journal of Statistical Mechanics: Theory and Experiment</i>.
    2017;2017(9). doi:<a href="https://doi.org/10.1088/1742-5468/aa85c3">10.1088/1742-5468/aa85c3</a>'
  apa: 'Colabrese, S., De Martino, D., Leuzzi, L., &#38; Marinari, E. (2017). Phase
    transitions in integer linear problems. <i>Journal of Statistical Mechanics: Theory
    and Experiment</i>. IOP Publishing. <a href="https://doi.org/10.1088/1742-5468/aa85c3">https://doi.org/10.1088/1742-5468/aa85c3</a>'
  chicago: 'Colabrese, Simona, Daniele De Martino, Luca Leuzzi, and Enzo Marinari.
    “Phase Transitions in Integer Linear Problems.” <i>Journal of Statistical Mechanics:
    Theory and Experiment</i>. IOP Publishing, 2017. <a href="https://doi.org/10.1088/1742-5468/aa85c3">https://doi.org/10.1088/1742-5468/aa85c3</a>.'
  ieee: 'S. Colabrese, D. De Martino, L. Leuzzi, and E. Marinari, “Phase transitions
    in integer linear problems,” <i>Journal of Statistical Mechanics: Theory and Experiment</i>,
    vol. 2017, no. 9. IOP Publishing, 2017.'
  ista: 'Colabrese S, De Martino D, Leuzzi L, Marinari E. 2017. Phase transitions
    in integer linear problems. Journal of Statistical Mechanics: Theory and Experiment.
    2017(9), 093404.'
  mla: 'Colabrese, Simona, et al. “Phase Transitions in Integer Linear Problems.”
    <i>Journal of Statistical Mechanics: Theory and Experiment</i>, vol. 2017, no.
    9, 093404, IOP Publishing, 2017, doi:<a href="https://doi.org/10.1088/1742-5468/aa85c3">10.1088/1742-5468/aa85c3</a>.'
  short: 'S. Colabrese, D. De Martino, L. Leuzzi, E. Marinari, Journal of Statistical
    Mechanics: Theory and Experiment 2017 (2017).'
das_tickbox: '1'
date_created: 2018-12-11T11:48:41Z
date_published: 2017-09-26T00:00:00Z
date_updated: 2026-07-07T13:11:04Z
day: '26'
department:
- _id: GaTk
doi: 10.1088/1742-5468/aa85c3
ec_funded: 1
external_id:
  arxiv:
  - '1705.06303'
  isi:
  - '000411842900001'
intvolume: '      2017'
isi: 1
issue: '9'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1705.06303
month: '09'
oa: 1
oa_version: Submitted Version
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
publication: 'Journal of Statistical Mechanics: Theory and Experiment'
publication_identifier:
  issn:
  - 1742-5468
publication_status: published
publisher: IOP Publishing
publist_id: '6826'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Phase transitions in integer linear problems
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 2017
year: '2017'
...
---
_id: '912'
abstract:
- lang: eng
  text: "We consider a many-body system of fermionic atoms interacting via a local
    pair potential and subject to an external potential within the framework of Bardeen-Cooper-Schrieffer
    (BCS) theory. We measure the free energy of the whole sample with respect to the
    free energy of a reference state which allows us to define a BCS functional with
    boundary conditions at infinity. Our main result is a lower bound for this energy
    functional in terms of expressions that typically appear in Ginzburg-Landau functionals.\r\n"
article_number: '081901'
article_processing_charge: No
arxiv: 1
author:
- first_name: Andreas
  full_name: Deuchert, Andreas
  id: 4DA65CD0-F248-11E8-B48F-1D18A9856A87
  last_name: Deuchert
  orcid: 0000-0003-3146-6746
citation:
  ama: Deuchert A. A lower bound for the BCS functional with boundary conditions at
    infinity. <i>Journal of Mathematical Physics</i>. 2017;58(8). doi:<a href="https://doi.org/10.1063/1.4996580">10.1063/1.4996580</a>
  apa: Deuchert, A. (2017). A lower bound for the BCS functional with boundary conditions
    at infinity. <i>Journal of Mathematical Physics</i>. AIP Publishing. <a href="https://doi.org/10.1063/1.4996580">https://doi.org/10.1063/1.4996580</a>
  chicago: Deuchert, Andreas. “A Lower Bound for the BCS Functional with Boundary
    Conditions at Infinity.” <i>Journal of Mathematical Physics</i>. AIP Publishing,
    2017. <a href="https://doi.org/10.1063/1.4996580">https://doi.org/10.1063/1.4996580</a>.
  ieee: A. Deuchert, “A lower bound for the BCS functional with boundary conditions
    at infinity,” <i>Journal of Mathematical Physics</i>, vol. 58, no. 8. AIP Publishing,
    2017.
  ista: Deuchert A. 2017. A lower bound for the BCS functional with boundary conditions
    at infinity. Journal of Mathematical Physics. 58(8), 081901.
  mla: Deuchert, Andreas. “A Lower Bound for the BCS Functional with Boundary Conditions
    at Infinity.” <i>Journal of Mathematical Physics</i>, vol. 58, no. 8, 081901,
    AIP Publishing, 2017, doi:<a href="https://doi.org/10.1063/1.4996580">10.1063/1.4996580</a>.
  short: A. Deuchert, Journal of Mathematical Physics 58 (2017).
corr_author: '1'
das_tickbox: '1'
date_created: 2018-12-11T11:49:10Z
date_published: 2017-08-01T00:00:00Z
date_updated: 2026-07-07T13:10:46Z
day: '01'
department:
- _id: RoSe
doi: 10.1063/1.4996580
ec_funded: 1
external_id:
  arxiv:
  - '1703.04616'
  isi:
  - '000409197200015'
intvolume: '        58'
isi: 1
issue: '8'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1703.04616
month: '08'
oa: 1
oa_version: Submitted Version
project:
- _id: 25C6DC12-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '694227'
  name: Analysis of quantum many-body systems
publication: Journal of Mathematical Physics
publication_identifier:
  issn:
  - 0022-2488
publication_status: published
publisher: AIP Publishing
publist_id: '6531'
quality_controlled: '1'
scopus_import: '1'
status: public
title: A lower bound for the BCS functional with boundary conditions at infinity
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 58
year: '2017'
...
---
_id: '744'
abstract:
- lang: eng
  text: In evolutionary game theory interactions between individuals are often assumed
    obligatory. However, in many real-life situations, individuals can decide to opt
    out of an interaction depending on the information they have about the opponent.
    We consider a simple evolutionary game theoretic model to study such a scenario,
    where at each encounter between two individuals the type of the opponent (cooperator/defector)
    is known with some probability, and where each individual either accepts or opts
    out of the interaction. If the type of the opponent is unknown, a trustful individual
    accepts the interaction, whereas a suspicious individual opts out of the interaction.
    If either of the two individuals opt out both individuals remain without an interaction.
    We show that in the prisoners dilemma optional interactions along with suspicious
    behaviour facilitates the emergence of trustful cooperation.
article_processing_charge: No
article_type: original
author:
- first_name: Tadeas
  full_name: Priklopil, Tadeas
  id: 3C869AA0-F248-11E8-B48F-1D18A9856A87
  last_name: Priklopil
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Martin
  full_name: Nowak, Martin
  last_name: Nowak
citation:
  ama: Priklopil T, Chatterjee K, Nowak M. Optional interactions and suspicious behaviour
    facilitates trustful cooperation in prisoners dilemma. <i>Journal of Theoretical
    Biology</i>. 2017;433:64-72. doi:<a href="https://doi.org/10.1016/j.jtbi.2017.08.025">10.1016/j.jtbi.2017.08.025</a>
  apa: Priklopil, T., Chatterjee, K., &#38; Nowak, M. (2017). Optional interactions
    and suspicious behaviour facilitates trustful cooperation in prisoners dilemma.
    <i>Journal of Theoretical Biology</i>. Elsevier. <a href="https://doi.org/10.1016/j.jtbi.2017.08.025">https://doi.org/10.1016/j.jtbi.2017.08.025</a>
  chicago: Priklopil, Tadeas, Krishnendu Chatterjee, and Martin Nowak. “Optional Interactions
    and Suspicious Behaviour Facilitates Trustful Cooperation in Prisoners Dilemma.”
    <i>Journal of Theoretical Biology</i>. Elsevier, 2017. <a href="https://doi.org/10.1016/j.jtbi.2017.08.025">https://doi.org/10.1016/j.jtbi.2017.08.025</a>.
  ieee: T. Priklopil, K. Chatterjee, and M. Nowak, “Optional interactions and suspicious
    behaviour facilitates trustful cooperation in prisoners dilemma,” <i>Journal of
    Theoretical Biology</i>, vol. 433. Elsevier, pp. 64–72, 2017.
  ista: Priklopil T, Chatterjee K, Nowak M. 2017. Optional interactions and suspicious
    behaviour facilitates trustful cooperation in prisoners dilemma. Journal of Theoretical
    Biology. 433, 64–72.
  mla: Priklopil, Tadeas, et al. “Optional Interactions and Suspicious Behaviour Facilitates
    Trustful Cooperation in Prisoners Dilemma.” <i>Journal of Theoretical Biology</i>,
    vol. 433, Elsevier, 2017, pp. 64–72, doi:<a href="https://doi.org/10.1016/j.jtbi.2017.08.025">10.1016/j.jtbi.2017.08.025</a>.
  short: T. Priklopil, K. Chatterjee, M. Nowak, Journal of Theoretical Biology 433
    (2017) 64–72.
corr_author: '1'
das_tickbox: '1'
date_created: 2018-12-11T11:48:16Z
date_published: 2017-11-21T00:00:00Z
date_updated: 2026-07-07T13:11:54Z
day: '21'
ddc:
- '000'
- '570'
department:
- _id: KrCh
doi: 10.1016/j.jtbi.2017.08.025
ec_funded: 1
external_id:
  isi:
  - '000412039800007'
  pmid:
  - '28867224'
file:
- access_level: open_access
  checksum: 4b43af1615ebf1a861840cb03d8a320c
  content_type: application/pdf
  creator: dernst
  date_created: 2019-11-19T07:57:39Z
  date_updated: 2020-07-14T12:47:58Z
  file_id: '7047'
  file_name: 2017_JournTheoretBio_Priklopil.pdf
  file_size: 537323
  relation: main_file
file_date_updated: 2020-07-14T12:47:58Z
has_accepted_license: '1'
intvolume: '       433'
isi: 1
language:
- iso: eng
month: '11'
oa: 1
oa_version: Submitted Version
page: 64 - 72
pmid: 1
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
publication: Journal of Theoretical Biology
publication_identifier:
  issn:
  - 0022-5193
publication_status: published
publisher: Elsevier
publist_id: '6923'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Optional interactions and suspicious behaviour facilitates trustful cooperation
  in prisoners dilemma
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 433
year: '2017'
...
---
_id: '947'
abstract:
- lang: eng
  text: Viewing the ways a living cell can organize its metabolism as the phase space
    of a physical system, regulation can be seen as the ability to reduce the entropy
    of that space by selecting specific cellular configurations that are, in some
    sense, optimal. Here we quantify the amount of regulation required to control
    a cell's growth rate by a maximum-entropy approach to the space of underlying
    metabolic phenotypes, where a configuration corresponds to a metabolic flux pattern
    as described by genome-scale models. We link the mean growth rate achieved by
    a population of cells to the minimal amount of metabolic regulation needed to
    achieve it through a phase diagram that highlights how growth suppression can
    be as costly (in regulatory terms) as growth enhancement. Moreover, we provide
    an interpretation of the inverse temperature β controlling maximum-entropy distributions
    based on the underlying growth dynamics. Specifically, we show that the asymptotic
    value of β for a cell population can be expected to depend on (i) the carrying
    capacity of the environment, (ii) the initial size of the colony, and (iii) the
    probability distribution from which the inoculum was sampled. Results obtained
    for E. coli and human cells are found to be remarkably consistent with empirical
    evidence.
article_number: '010401'
article_processing_charge: No
arxiv: 1
author:
- first_name: Daniele
  full_name: De Martino, Daniele
  id: 3FF5848A-F248-11E8-B48F-1D18A9856A87
  last_name: De Martino
  orcid: 0000-0002-5214-4706
- first_name: Fabrizio
  full_name: Capuani, Fabrizio
  last_name: Capuani
- first_name: Andrea
  full_name: De Martino, Andrea
  last_name: De Martino
citation:
  ama: De Martino D, Capuani F, De Martino A. Quantifying the entropic cost of cellular
    growth control. <i>Physical Review E</i>. 2017;96(1). doi:<a href="https://doi.org/10.1103/PhysRevE.96.010401">10.1103/PhysRevE.96.010401</a>
  apa: De Martino, D., Capuani, F., &#38; De Martino, A. (2017). Quantifying the entropic
    cost of cellular growth control. <i>Physical Review E</i>. American Institute
    of Physics. <a href="https://doi.org/10.1103/PhysRevE.96.010401">https://doi.org/10.1103/PhysRevE.96.010401</a>
  chicago: De Martino, Daniele, Fabrizio Capuani, and Andrea De Martino. “Quantifying
    the Entropic Cost of Cellular Growth Control.” <i>Physical Review E</i>. American
    Institute of Physics, 2017. <a href="https://doi.org/10.1103/PhysRevE.96.010401">https://doi.org/10.1103/PhysRevE.96.010401</a>.
  ieee: D. De Martino, F. Capuani, and A. De Martino, “Quantifying the entropic cost
    of cellular growth control,” <i>Physical Review E</i>, vol. 96, no. 1. American
    Institute of Physics, 2017.
  ista: De Martino D, Capuani F, De Martino A. 2017. Quantifying the entropic cost
    of cellular growth control. Physical Review E. 96(1), 010401.
  mla: De Martino, Daniele, et al. “Quantifying the Entropic Cost of Cellular Growth
    Control.” <i>Physical Review E</i>, vol. 96, no. 1, 010401, American Institute
    of Physics, 2017, doi:<a href="https://doi.org/10.1103/PhysRevE.96.010401">10.1103/PhysRevE.96.010401</a>.
  short: D. De Martino, F. Capuani, A. De Martino, Physical Review E 96 (2017).
das_tickbox: '1'
date_created: 2018-12-11T11:49:21Z
date_published: 2017-07-10T00:00:00Z
date_updated: 2026-07-07T13:17:59Z
day: '10'
department:
- _id: GaTk
doi: 10.1103/PhysRevE.96.010401
ec_funded: 1
external_id:
  arxiv:
  - '1703.00219'
  isi:
  - '000405194200002'
intvolume: '        96'
isi: 1
issue: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1703.00219
month: '07'
oa: 1
oa_version: Submitted Version
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
publication: Physical Review E
publication_identifier:
  issn:
  - 2470-0045
publication_status: published
publisher: American Institute of Physics
publist_id: '6470'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Quantifying the entropic cost of cellular growth control
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 96
year: '2017'
...
---
_id: '1076'
abstract:
- lang: eng
  text: Signatures of the Coulomb corrections in the photoelectron momentum distribution
    during laser-induced ionization of atoms or ions in tunneling and multiphoton
    regimes are investigated analytically in the case of a one-dimensional problem.
    A high-order Coulomb-corrected strong-field approximation is applied, where the
    exact continuum state in the S matrix is approximated by the eikonal Coulomb-Volkov
    state including the second-order corrections to the eikonal. Although without
    high-order corrections our theory coincides with the known analytical R-matrix
    (ARM) theory, we propose a simplified procedure for the matrix element derivation.
    Rather than matching the eikonal Coulomb-Volkov wave function with the bound state
    as in the ARM theory to remove the Coulomb singularity, we calculate the matrix
    element via the saddle-point integration method by time as well as by coordinate,
    and in this way avoiding the Coulomb singularity. The momentum shift in the photoelectron
    momentum distribution with respect to the ARM theory due to high-order corrections
    is analyzed for tunneling and multiphoton regimes. The relation of the quantum
    corrections to the tunneling delay time is discussed.
article_number: '023403'
article_processing_charge: No
arxiv: 1
author:
- first_name: Michael
  full_name: Klaiber, Michael
  last_name: Klaiber
- first_name: Jiří
  full_name: Daněk, Jiří
  last_name: Daněk
- first_name: Enderalp
  full_name: Yakaboylu, Enderalp
  id: 38CB71F6-F248-11E8-B48F-1D18A9856A87
  last_name: Yakaboylu
  orcid: 0000-0001-5973-0874
- first_name: Karen
  full_name: Hatsagortsyan, Karen
  last_name: Hatsagortsyan
- first_name: Christoph
  full_name: Keitel, Christoph
  last_name: Keitel
citation:
  ama: Klaiber M, Daněk J, Yakaboylu E, Hatsagortsyan K, Keitel C. Strong-field ionization
    via a high-order Coulomb-corrected strong-field approximation. <i>Physical Review
    A</i>. 2017;95(2). doi:<a href="https://doi.org/10.1103/PhysRevA.95.023403">10.1103/PhysRevA.95.023403</a>
  apa: Klaiber, M., Daněk, J., Yakaboylu, E., Hatsagortsyan, K., &#38; Keitel, C.
    (2017). Strong-field ionization via a high-order Coulomb-corrected strong-field
    approximation. <i>Physical Review A</i>. American Physical Society. <a href="https://doi.org/10.1103/PhysRevA.95.023403">https://doi.org/10.1103/PhysRevA.95.023403</a>
  chicago: Klaiber, Michael, Jiří Daněk, Enderalp Yakaboylu, Karen Hatsagortsyan,
    and Christoph Keitel. “Strong-Field Ionization via a High-Order Coulomb-Corrected
    Strong-Field Approximation.” <i>Physical Review A</i>. American Physical Society,
    2017. <a href="https://doi.org/10.1103/PhysRevA.95.023403">https://doi.org/10.1103/PhysRevA.95.023403</a>.
  ieee: M. Klaiber, J. Daněk, E. Yakaboylu, K. Hatsagortsyan, and C. Keitel, “Strong-field
    ionization via a high-order Coulomb-corrected strong-field approximation,” <i>Physical
    Review A</i>, vol. 95, no. 2. American Physical Society, 2017.
  ista: Klaiber M, Daněk J, Yakaboylu E, Hatsagortsyan K, Keitel C. 2017. Strong-field
    ionization via a high-order Coulomb-corrected strong-field approximation. Physical
    Review A. 95(2), 023403.
  mla: Klaiber, Michael, et al. “Strong-Field Ionization via a High-Order Coulomb-Corrected
    Strong-Field Approximation.” <i>Physical Review A</i>, vol. 95, no. 2, 023403,
    American Physical Society, 2017, doi:<a href="https://doi.org/10.1103/PhysRevA.95.023403">10.1103/PhysRevA.95.023403</a>.
  short: M. Klaiber, J. Daněk, E. Yakaboylu, K. Hatsagortsyan, C. Keitel, Physical
    Review A 95 (2017).
das_tickbox: '1'
date_created: 2018-12-11T11:50:01Z
date_published: 2017-02-01T00:00:00Z
date_updated: 2026-07-07T13:17:34Z
day: '01'
department:
- _id: MiLe
doi: 10.1103/PhysRevA.95.023403
ec_funded: 1
external_id:
  arxiv:
  - '1609.07018'
  isi:
  - '000400571700011'
intvolume: '        95'
isi: 1
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1609.07018
month: '02'
oa: 1
oa_version: Submitted Version
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
publication: Physical Review A
publication_identifier:
  issn:
  - 2469-9926
publication_status: published
publisher: American Physical Society
publist_id: '6305'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Strong-field ionization via a high-order Coulomb-corrected strong-field approximation
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 95
year: '2017'
...
---
_id: '959'
abstract:
- lang: eng
  text: In this work it is shown that scale-free tails in metabolic flux distributions
    inferred in stationary models are an artifact due to reactions involved in thermodynamically
    unfeasible cycles, unbounded by physical constraints and in principle able to
    perform work without expenditure of free energy. After implementing thermodynamic
    constraints by removing such loops, metabolic flux distributions scale meaningfully
    with the physical limiting factors, acquiring in turn a richer multimodal structure
    potentially leading to symmetry breaking while optimizing for objective functions.
article_processing_charge: No
arxiv: 1
author:
- first_name: Daniele
  full_name: De Martino, Daniele
  id: 3FF5848A-F248-11E8-B48F-1D18A9856A87
  last_name: De Martino
  orcid: 0000-0002-5214-4706
citation:
  ama: De Martino D. Scales and multimodal flux distributions in stationary metabolic
    network models via thermodynamics. <i>Physical Review E</i>. 2017;95(6):062419.
    doi:<a href="https://doi.org/10.1103/PhysRevE.95.062419">10.1103/PhysRevE.95.062419</a>
  apa: De Martino, D. (2017). Scales and multimodal flux distributions in stationary
    metabolic network models via thermodynamics. <i>Physical Review E</i>. American
    Institute of Physics. <a href="https://doi.org/10.1103/PhysRevE.95.062419">https://doi.org/10.1103/PhysRevE.95.062419</a>
  chicago: De Martino, Daniele. “Scales and Multimodal Flux Distributions in Stationary
    Metabolic Network Models via Thermodynamics.” <i>Physical Review E</i>. American
    Institute of Physics, 2017. <a href="https://doi.org/10.1103/PhysRevE.95.062419">https://doi.org/10.1103/PhysRevE.95.062419</a>.
  ieee: D. De Martino, “Scales and multimodal flux distributions in stationary metabolic
    network models via thermodynamics,” <i>Physical Review E</i>, vol. 95, no. 6.
    American Institute of Physics, p. 062419, 2017.
  ista: De Martino D. 2017. Scales and multimodal flux distributions in stationary
    metabolic network models via thermodynamics. Physical Review E. 95(6), 062419.
  mla: De Martino, Daniele. “Scales and Multimodal Flux Distributions in Stationary
    Metabolic Network Models via Thermodynamics.” <i>Physical Review E</i>, vol. 95,
    no. 6, American Institute of Physics, 2017, p. 062419, doi:<a href="https://doi.org/10.1103/PhysRevE.95.062419">10.1103/PhysRevE.95.062419</a>.
  short: D. De Martino, Physical Review E 95 (2017) 062419.
das_tickbox: '1'
date_created: 2018-12-11T11:49:25Z
date_published: 2017-06-28T00:00:00Z
date_updated: 2026-07-07T13:19:44Z
day: '28'
department:
- _id: GaTk
doi: 10.1103/PhysRevE.95.062419
ec_funded: 1
external_id:
  arxiv:
  - '1703.00853'
  isi:
  - '000404546400004'
intvolume: '        95'
isi: 1
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1703.00853
month: '06'
oa: 1
oa_version: Submitted Version
page: '062419'
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '291734'
  name: International IST Postdoc Fellowship Programme
publication: Physical Review E
publication_identifier:
  issn:
  - 2470-0045
publication_status: published
publisher: American Institute of Physics
publist_id: '6446'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Scales and multimodal flux distributions in stationary metabolic network models
  via thermodynamics
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 95
year: '2017'
...
---
_id: '6526'
abstract:
- lang: eng
  text: 'This paper studies the complexity of estimating Rényi divergences of discrete
    distributions: p observed from samples and the baseline distribution q known a
    priori. Extending the results of Acharya et al. (SODA''15) on estimating Rényi
    entropy, we present improved estimation techniques together with upper and lower
    bounds on the sample complexity. We show that, contrarily to estimating Rényi
    entropy where a sublinear (in the alphabet size) number of samples suffices, the
    sample complexity is heavily dependent on events occurring unlikely in q, and
    is unbounded in general (no matter what an estimation technique is used). For
    any divergence of integer order bigger than 1, we provide upper and lower bounds
    on the number of samples dependent on probabilities of p and q (the lower bounds
    hold for non-integer orders as well). We conclude that the worst-case sample complexity
    is polynomial in the alphabet size if and only if the probabilities of q are non-negligible.
    This gives theoretical insights into heuristics used in the applied literature
    to handle numerical instability, which occurs for small probabilities of q. Our
    result shows that they should be handled with care not only because of numerical
    issues, but also because of a blow up in the sample complexity.'
article_number: '8006529'
article_processing_charge: No
arxiv: 1
author:
- first_name: Maciej
  full_name: Skórski, Maciej
  id: EC09FA6A-02D0-11E9-8223-86B7C91467DD
  last_name: Skórski
citation:
  ama: 'Skórski M. On the complexity of estimating Rènyi divergences. In: <i>2017
    IEEE International Symposium on Information Theory</i>. IEEE; 2017. doi:<a href="https://doi.org/10.1109/isit.2017.8006529">10.1109/isit.2017.8006529</a>'
  apa: 'Skórski, M. (2017). On the complexity of estimating Rènyi divergences. In
    <i>2017 IEEE International Symposium on Information Theory</i>. Aachen, Germany:
    IEEE. <a href="https://doi.org/10.1109/isit.2017.8006529">https://doi.org/10.1109/isit.2017.8006529</a>'
  chicago: Skórski, Maciej. “On the Complexity of Estimating Rènyi Divergences.” In
    <i>2017 IEEE International Symposium on Information Theory</i>. IEEE, 2017. <a
    href="https://doi.org/10.1109/isit.2017.8006529">https://doi.org/10.1109/isit.2017.8006529</a>.
  ieee: M. Skórski, “On the complexity of estimating Rènyi divergences,” in <i>2017
    IEEE International Symposium on Information Theory</i>, Aachen, Germany, 2017.
  ista: 'Skórski M. 2017. On the complexity of estimating Rènyi divergences. 2017
    IEEE International Symposium on Information Theory. ISIT: International Symposium
    on Information Theory, 8006529.'
  mla: Skórski, Maciej. “On the Complexity of Estimating Rènyi Divergences.” <i>2017
    IEEE International Symposium on Information Theory</i>, 8006529, IEEE, 2017, doi:<a
    href="https://doi.org/10.1109/isit.2017.8006529">10.1109/isit.2017.8006529</a>.
  short: M. Skórski, in:, 2017 IEEE International Symposium on Information Theory,
    IEEE, 2017.
conference:
  end_date: 2017-06-30
  location: Aachen, Germany
  name: 'ISIT: International Symposium on Information Theory'
  start_date: 2017-06-25
das_tickbox: '1'
date_created: 2019-06-06T12:53:09Z
date_published: 2017-08-09T00:00:00Z
date_updated: 2026-07-07T13:32:59Z
day: '09'
department:
- _id: KrPi
doi: 10.1109/isit.2017.8006529
ec_funded: 1
external_id:
  arxiv:
  - '1702.01666'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1702.01666
month: '08'
oa: 1
oa_version: Preprint
project:
- _id: 258AA5B2-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '682815'
  name: Teaching Old Crypto New Tricks
publication: 2017 IEEE International Symposium on Information Theory
publication_identifier:
  isbn:
  - '9781509040964'
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: On the complexity of estimating Rènyi divergences
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2017'
...
