--- _id: '1285' abstract: - lang: eng text: Cell migration is central to a multitude of physiological processes, including embryonic development, immune surveillance, and wound healing, and deregulated migration is key to cancer dissemination. Decades of investigations have uncovered many of the molecular and physical mechanisms underlying cell migration. Together with protrusion extension and cell body retraction, adhesion to the substrate via specific focal adhesion points has long been considered an essential step in cell migration. Although this is true for cells moving on two-dimensional substrates, recent studies have demonstrated that focal adhesions are not required for cells moving in three dimensions, in which confinement is sufficient to maintain a cell in contact with its substrate. Here, we review the investigations that have led to challenging the requirement of specific adhesions for migration, discuss the physical mechanisms proposed for cell body translocation during focal adhesion-independent migration, and highlight the remaining open questions for the future. acknowledgement: We would like to thank Dani Bodor for critical comments on the manuscript and Guillaume Salbreux for discussions. The authors are supported by the United Kingdom's Medical Research Council (MRC) (E.K.P. and I.M.A.; core funding to the MRC Laboratory for Molecular Cell Biology), by the European Research Council [ERC GA 311637 (E.K.P.) and ERC GA 281556 (M.S.)], and by a START award from the Austrian Science Foundation (M.S.). article_processing_charge: No author: - first_name: Ewa full_name: Paluch, Ewa last_name: Paluch - first_name: Irene full_name: Aspalter, Irene last_name: Aspalter - first_name: Michael K full_name: Sixt, Michael K id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87 last_name: Sixt orcid: 0000-0002-6620-9179 citation: ama: Paluch E, Aspalter I, Sixt MK. Focal adhesion-independent cell migration. Annual Review of Cell and Developmental Biology. 2016;32:469-490. doi:10.1146/annurev-cellbio-111315-125341 apa: Paluch, E., Aspalter, I., & Sixt, M. K. (2016). Focal adhesion-independent cell migration. Annual Review of Cell and Developmental Biology. Annual Reviews. https://doi.org/10.1146/annurev-cellbio-111315-125341 chicago: Paluch, Ewa, Irene Aspalter, and Michael K Sixt. “Focal Adhesion-Independent Cell Migration.” Annual Review of Cell and Developmental Biology. Annual Reviews, 2016. https://doi.org/10.1146/annurev-cellbio-111315-125341. ieee: E. Paluch, I. Aspalter, and M. K. Sixt, “Focal adhesion-independent cell migration,” Annual Review of Cell and Developmental Biology, vol. 32. Annual Reviews, pp. 469–490, 2016. ista: Paluch E, Aspalter I, Sixt MK. 2016. Focal adhesion-independent cell migration. Annual Review of Cell and Developmental Biology. 32, 469–490. mla: Paluch, Ewa, et al. “Focal Adhesion-Independent Cell Migration.” Annual Review of Cell and Developmental Biology, vol. 32, Annual Reviews, 2016, pp. 469–90, doi:10.1146/annurev-cellbio-111315-125341. short: E. Paluch, I. Aspalter, M.K. Sixt, Annual Review of Cell and Developmental Biology 32 (2016) 469–490. date_created: 2018-12-11T11:51:08Z date_published: 2016-10-06T00:00:00Z date_updated: 2025-09-22T08:33:40Z day: '06' department: - _id: MiSi doi: 10.1146/annurev-cellbio-111315-125341 ec_funded: 1 external_id: isi: - '000389576900019' fulldoi: https://doi.org/10.1146/annurev-cellbio-111315-125341 intvolume: ' 32' isi: 1 language: - iso: eng month: '10' oa_version: None page: 469 - 490 project: - _id: 25A603A2-B435-11E9-9278-68D0E5697425 call_identifier: FP7 grant_number: '281556' name: Cytoskeletal force generation and force transduction of migrating leukocytes - _id: 25A8E5EA-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: Y 564-B12 name: Cytoskeletal force generation and force transduction of migrating leukocytes publication: Annual Review of Cell and Developmental Biology publication_status: published publisher: Annual Reviews publist_id: '6031' quality_controlled: '1' scopus_import: '1' status: public title: Focal adhesion-independent cell migration type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 32 year: '2016' ... --- _id: '1287' abstract: - lang: eng text: A planar waveguide with an impedance boundary, composed of nonperfect metallic plates, and with passive or active dielectric filling, is considered. We show the possibility of selective mode guiding and amplification when a homogeneous pump is added to the dielectric and analyze differences in TE and TM mode propagation. Such a non-conservative system is also shown to feature exceptional points for specific and experimentally tunable parameters, which are described for a particular case of transparent dielectric. acknowledgement: The research of B.M. is supported by the People Programme (Marie Curie Actions) of the European Union’s Seventh Framework Programme (FP7/2007-2013) under REA grant No. [291734]. article_processing_charge: No arxiv: 1 author: - first_name: Bikashkali full_name: Midya, Bikashkali id: 456187FC-F248-11E8-B48F-1D18A9856A87 last_name: Midya - first_name: Vladimir full_name: Konotop, Vladimir last_name: Konotop citation: ama: Midya B, Konotop V. Modes and exceptional points in waveguides with impedance boundary conditions. Optics Letters. 2016;41(20):4621-4624. doi:10.1364/OL.41.004621 apa: Midya, B., & Konotop, V. (2016). Modes and exceptional points in waveguides with impedance boundary conditions. Optics Letters. Optica Publishing Group. https://doi.org/10.1364/OL.41.004621 chicago: Midya, Bikashkali, and Vladimir Konotop. “Modes and Exceptional Points in Waveguides with Impedance Boundary Conditions.” Optics Letters. Optica Publishing Group, 2016. https://doi.org/10.1364/OL.41.004621. ieee: B. Midya and V. Konotop, “Modes and exceptional points in waveguides with impedance boundary conditions,” Optics Letters, vol. 41, no. 20. Optica Publishing Group, pp. 4621–4624, 2016. ista: Midya B, Konotop V. 2016. Modes and exceptional points in waveguides with impedance boundary conditions. Optics Letters. 41(20), 4621–4624. mla: Midya, Bikashkali, and Vladimir Konotop. “Modes and Exceptional Points in Waveguides with Impedance Boundary Conditions.” Optics Letters, vol. 41, no. 20, Optica Publishing Group, 2016, pp. 4621–24, doi:10.1364/OL.41.004621. short: B. Midya, V. Konotop, Optics Letters 41 (2016) 4621–4624. corr_author: '1' date_created: 2018-12-11T11:51:09Z date_published: 2016-10-15T00:00:00Z date_updated: 2025-09-22T08:32:34Z day: '15' department: - _id: MiLe doi: 10.1364/OL.41.004621 ec_funded: 1 external_id: arxiv: - '1609.02863' isi: - '000386854500005' fulldoi: https://doi.org/10.1364/OL.41.004621 intvolume: ' 41' isi: 1 issue: '20' language: - iso: eng main_file_link: - open_access: '1' url: https://arxiv.org/abs/1609.02863 month: '10' oa: 1 oa_version: Preprint page: 4621 - 4624 project: - _id: 25681D80-B435-11E9-9278-68D0E5697425 call_identifier: FP7 grant_number: '291734' name: International IST Postdoc Fellowship Programme publication: Optics Letters publication_status: published publisher: Optica Publishing Group publist_id: '6029' quality_controlled: '1' scopus_import: '1' status: public title: Modes and exceptional points in waveguides with impedance boundary conditions type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 41 year: '2016' ... --- _id: '1288' abstract: - lang: eng text: Respiratory complex I transfers electrons from NADH to quinone, utilizing the reaction energy to translocate protons across the membrane. It is a key enzyme of the respiratory chain of many prokaryotic and most eukaryotic organisms. The reversible NADH oxidation reaction is facilitated in complex I by non-covalently bound flavin mononucleotide (FMN). Here we report that the catalytic activity of E. coli complex I with artificial electron acceptors potassium ferricyanide (FeCy) and hexaamineruthenium (HAR) is significantly inhibited in the enzyme pre-reduced by NADH. Further, we demonstrate that the inhibition is caused by reversible dissociation of FMN. The binding constant (Kd) for FMN increases from the femto- or picomolar range in oxidized complex I to the nanomolar range in the NADH reduced enzyme, with an FMN dissociation time constant of ~ 5 s. The oxidation state of complex I, rather than that of FMN, proved critical to the dissociation. Such dissociation is not observed with the T. thermophilus enzyme and our analysis suggests that the difference may be due to the unusually high redox potential of Fe-S cluster N1a in E. coli. It is possible that the enzyme attenuates ROS production in vivo by releasing FMN under highly reducing conditions. acknowledgement: This work was funded by the UK Medical Research Council. article_processing_charge: No author: - first_name: Peter full_name: Holt, Peter last_name: Holt - first_name: Rouslan full_name: Efremov, Rouslan last_name: Efremov - first_name: Eiko full_name: Nakamaru Ogiso, Eiko last_name: Nakamaru Ogiso - first_name: Leonid A full_name: Sazanov, Leonid A id: 338D39FE-F248-11E8-B48F-1D18A9856A87 last_name: Sazanov orcid: 0000-0002-0977-7989 citation: ama: Holt P, Efremov R, Nakamaru Ogiso E, Sazanov LA. Reversible FMN dissociation from Escherichia coli respiratory complex I. Biochimica et Biophysica Acta - Bioenergetics. 2016;1857(11):1777-1785. doi:10.1016/j.bbabio.2016.08.008 apa: Holt, P., Efremov, R., Nakamaru Ogiso, E., & Sazanov, L. A. (2016). Reversible FMN dissociation from Escherichia coli respiratory complex I. Biochimica et Biophysica Acta - Bioenergetics. Elsevier. https://doi.org/10.1016/j.bbabio.2016.08.008 chicago: Holt, Peter, Rouslan Efremov, Eiko Nakamaru Ogiso, and Leonid A Sazanov. “Reversible FMN Dissociation from Escherichia Coli Respiratory Complex I.” Biochimica et Biophysica Acta - Bioenergetics. Elsevier, 2016. https://doi.org/10.1016/j.bbabio.2016.08.008. ieee: P. Holt, R. Efremov, E. Nakamaru Ogiso, and L. A. Sazanov, “Reversible FMN dissociation from Escherichia coli respiratory complex I,” Biochimica et Biophysica Acta - Bioenergetics, vol. 1857, no. 11. Elsevier, pp. 1777–1785, 2016. ista: Holt P, Efremov R, Nakamaru Ogiso E, Sazanov LA. 2016. Reversible FMN dissociation from Escherichia coli respiratory complex I. Biochimica et Biophysica Acta - Bioenergetics. 1857(11), 1777–1785. mla: Holt, Peter, et al. “Reversible FMN Dissociation from Escherichia Coli Respiratory Complex I.” Biochimica et Biophysica Acta - Bioenergetics, vol. 1857, no. 11, Elsevier, 2016, pp. 1777–85, doi:10.1016/j.bbabio.2016.08.008. short: P. Holt, R. Efremov, E. Nakamaru Ogiso, L.A. Sazanov, Biochimica et Biophysica Acta - Bioenergetics 1857 (2016) 1777–1785. corr_author: '1' date_created: 2018-12-11T11:51:09Z date_published: 2016-11-01T00:00:00Z date_updated: 2025-09-22T08:32:00Z day: '01' department: - _id: LeSa doi: 10.1016/j.bbabio.2016.08.008 external_id: isi: - '000384867400007' fulldoi: https://doi.org/10.1016/j.bbabio.2016.08.008 intvolume: ' 1857' isi: 1 issue: '11' language: - iso: eng month: '11' oa_version: None page: 1777 - 1785 publication: Biochimica et Biophysica Acta - Bioenergetics publication_status: published publisher: Elsevier publist_id: '6028' quality_controlled: '1' scopus_import: '1' status: public title: Reversible FMN dissociation from Escherichia coli respiratory complex I type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 1857 year: '2016' ... --- _id: '1289' abstract: - lang: eng text: 'Aiming at the automatic diagnosis of tumors using narrow band imaging (NBI) magnifying endoscopic (ME) images of the stomach, we combine methods from image processing, topology, geometry, and machine learning to classify patterns into three classes: oval, tubular and irregular. Training the algorithm on a small number of images of each type, we achieve a high rate of correct classifications. The analysis of the learning algorithm reveals that a handful of geometric and topological features are responsible for the overwhelming majority of decisions.' article_processing_charge: No author: - first_name: Olga full_name: Dunaeva, Olga last_name: Dunaeva - first_name: Herbert full_name: Edelsbrunner, Herbert id: 3FB178DA-F248-11E8-B48F-1D18A9856A87 last_name: Edelsbrunner orcid: 0000-0002-9823-6833 - first_name: Anton full_name: Lukyanov, Anton last_name: Lukyanov - first_name: Michael full_name: Machin, Michael last_name: Machin - first_name: Daria full_name: Malkova, Daria last_name: Malkova - first_name: Roman full_name: Kuvaev, Roman last_name: Kuvaev - first_name: Sergey full_name: Kashin, Sergey last_name: Kashin citation: ama: Dunaeva O, Edelsbrunner H, Lukyanov A, et al. The classification of endoscopy images with persistent homology. Pattern Recognition Letters. 2016;83(1):13-22. doi:10.1016/j.patrec.2015.12.012 apa: Dunaeva, O., Edelsbrunner, H., Lukyanov, A., Machin, M., Malkova, D., Kuvaev, R., & Kashin, S. (2016). The classification of endoscopy images with persistent homology. Pattern Recognition Letters. Elsevier. https://doi.org/10.1016/j.patrec.2015.12.012 chicago: Dunaeva, Olga, Herbert Edelsbrunner, Anton Lukyanov, Michael Machin, Daria Malkova, Roman Kuvaev, and Sergey Kashin. “The Classification of Endoscopy Images with Persistent Homology.” Pattern Recognition Letters. Elsevier, 2016. https://doi.org/10.1016/j.patrec.2015.12.012. ieee: O. Dunaeva et al., “The classification of endoscopy images with persistent homology,” Pattern Recognition Letters, vol. 83, no. 1. Elsevier, pp. 13–22, 2016. ista: Dunaeva O, Edelsbrunner H, Lukyanov A, Machin M, Malkova D, Kuvaev R, Kashin S. 2016. The classification of endoscopy images with persistent homology. Pattern Recognition Letters. 83(1), 13–22. mla: Dunaeva, Olga, et al. “The Classification of Endoscopy Images with Persistent Homology.” Pattern Recognition Letters, vol. 83, no. 1, Elsevier, 2016, pp. 13–22, doi:10.1016/j.patrec.2015.12.012. short: O. Dunaeva, H. Edelsbrunner, A. Lukyanov, M. Machin, D. Malkova, R. Kuvaev, S. Kashin, Pattern Recognition Letters 83 (2016) 13–22. date_created: 2018-12-11T11:51:10Z date_published: 2016-11-01T00:00:00Z date_updated: 2025-09-23T13:44:16Z day: '01' ddc: - '004' - '514' department: - _id: HeEd doi: 10.1016/j.patrec.2015.12.012 external_id: isi: - '000386874700003' file: - access_level: open_access checksum: 33458bbb8c32a339e1adeca6d5a1112d content_type: application/pdf creator: dernst date_created: 2019-04-17T07:55:51Z date_updated: 2020-07-14T12:44:42Z file_id: '6334' file_name: 2016-Edelsbrunner_The_classification.pdf file_size: 1921113 relation: main_file file_date_updated: 2020-07-14T12:44:42Z fulldoi: https://doi.org/10.1016/j.patrec.2015.12.012 has_accepted_license: '1' intvolume: ' 83' isi: 1 issue: '1' language: - iso: eng license: https://creativecommons.org/licenses/by-nc-nd/4.0/ month: '11' oa: 1 oa_version: Submitted Version page: 13 - 22 publication: Pattern Recognition Letters publication_status: published publisher: Elsevier publist_id: '6027' pubrep_id: '975' quality_controlled: '1' related_material: record: - id: '1568' relation: earlier_version status: public scopus_import: '1' status: public title: The classification of endoscopy images with persistent homology tmp: image: /images/cc_by_nc_nd.png legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0) short: CC BY-NC-ND (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 83 year: '2016' ... --- _id: '1290' abstract: - lang: eng text: We developed a competition-based screening strategy to identify compounds that invert the selective advantage of antibiotic resistance. Using our assay, we screened over 19,000 compounds for the ability to select against the TetA tetracycline-resistance efflux pump in Escherichia coli and identified two hits, β-thujaplicin and disulfiram. Treating a tetracycline-resistant population with β-thujaplicin selects for loss of the resistance gene, enabling an effective second-phase treatment with doxycycline. acknowledgement: "This work was supported in part by National Institute of Allergy and Infectious Diseases grant U54 AI057159, US National Institutes of Health grants R01 GM081617 (to R.K.) and GM086258 (to J.C.), European Research Council FP7 ERC grant 281891 (to R.K.) and a National Science Foundation Graduate Fellowship (to L.K.S.).\r\n" article_processing_charge: No author: - first_name: Laura full_name: Stone, Laura last_name: Stone - first_name: Michael full_name: Baym, Michael last_name: Baym - first_name: Tami full_name: Lieberman, Tami last_name: Lieberman - first_name: Remy P full_name: Chait, Remy P id: 3464AE84-F248-11E8-B48F-1D18A9856A87 last_name: Chait orcid: 0000-0003-0876-3187 - first_name: Jon full_name: Clardy, Jon last_name: Clardy - first_name: Roy full_name: Kishony, Roy last_name: Kishony citation: ama: Stone L, Baym M, Lieberman T, Chait RP, Clardy J, Kishony R. Compounds that select against the tetracycline-resistance efflux pump. Nature Chemical Biology. 2016;12(11):902-904. doi:10.1038/nchembio.2176 apa: Stone, L., Baym, M., Lieberman, T., Chait, R. P., Clardy, J., & Kishony, R. (2016). Compounds that select against the tetracycline-resistance efflux pump. Nature Chemical Biology. Nature Publishing Group. https://doi.org/10.1038/nchembio.2176 chicago: Stone, Laura, Michael Baym, Tami Lieberman, Remy P Chait, Jon Clardy, and Roy Kishony. “Compounds That Select against the Tetracycline-Resistance Efflux Pump.” Nature Chemical Biology. Nature Publishing Group, 2016. https://doi.org/10.1038/nchembio.2176. ieee: L. Stone, M. Baym, T. Lieberman, R. P. Chait, J. Clardy, and R. Kishony, “Compounds that select against the tetracycline-resistance efflux pump,” Nature Chemical Biology, vol. 12, no. 11. Nature Publishing Group, pp. 902–904, 2016. ista: Stone L, Baym M, Lieberman T, Chait RP, Clardy J, Kishony R. 2016. Compounds that select against the tetracycline-resistance efflux pump. Nature Chemical Biology. 12(11), 902–904. mla: Stone, Laura, et al. “Compounds That Select against the Tetracycline-Resistance Efflux Pump.” Nature Chemical Biology, vol. 12, no. 11, Nature Publishing Group, 2016, pp. 902–04, doi:10.1038/nchembio.2176. short: L. Stone, M. Baym, T. Lieberman, R.P. Chait, J. Clardy, R. Kishony, Nature Chemical Biology 12 (2016) 902–904. date_created: 2018-12-11T11:51:10Z date_published: 2016-11-01T00:00:00Z date_updated: 2025-09-22T08:30:48Z day: '01' department: - _id: CaGu - _id: GaTk doi: 10.1038/nchembio.2176 external_id: isi: - '000386798800008' fulldoi: https://doi.org/10.1038/nchembio.2176 intvolume: ' 12' isi: 1 issue: '11' language: - iso: eng main_file_link: - open_access: '1' url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5069154/ month: '11' oa: 1 oa_version: Preprint page: 902 - 904 publication: Nature Chemical Biology publication_status: published publisher: Nature Publishing Group publist_id: '6026' quality_controlled: '1' scopus_import: '1' status: public title: Compounds that select against the tetracycline-resistance efflux pump type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 12 year: '2016' ... --- _id: '1291' abstract: - lang: eng text: We consider Ising models in two and three dimensions, with short range ferromagnetic and long range, power-law decaying, antiferromagnetic interactions. We let J be the ratio between the strength of the ferromagnetic to antiferromagnetic interactions. The competition between these two kinds of interactions induces the system to form domains of minus spins in a background of plus spins, or vice versa. If the decay exponent p of the long range interaction is larger than d + 1, with d the space dimension, this happens for all values of J smaller than a critical value Jc(p), beyond which the ground state is homogeneous. In this paper, we give a characterization of the infinite volume ground states of the system, for p > 2d and J in a left neighborhood of Jc(p). In particular, we prove that the quasi-one-dimensional states consisting of infinite stripes (d = 2) or slabs (d = 3), all of the same optimal width and orientation, and alternating magnetization, are infinite volume ground states. Our proof is based on localization bounds combined with reflection positivity. acknowledgement: "Open access funding provided by Institute of Science and Technology (IST Austria). The\r\nresearch leading to these results has received funding from the European Research Council under the European\r\nUnion’s Seventh Framework Programme ERC Starting Grant CoMBoS (Grant Agreement No. 239694), from\r\nthe Italian PRIN National Grant Geometric and analytic theory of Hamiltonian systems in finite and infinite\r\ndimensions, and the Austrian Science Fund (FWF), project Nr. P 27533-N27. Part of this work was completed\r\nduring a stay at the Erwin Schrödinger Institute for Mathematical Physics in Vienna (ESI program 2015\r\n“Quantum many-body systems, random matrices, and disorder”), whose hospitality and financial support is\r\ngratefully acknowledged." article_processing_charge: No author: - first_name: Alessandro full_name: Giuliani, Alessandro last_name: Giuliani - first_name: Robert full_name: Seiringer, Robert id: 4AFD0470-F248-11E8-B48F-1D18A9856A87 last_name: Seiringer orcid: 0000-0002-6781-0521 citation: ama: Giuliani A, Seiringer R. Periodic striped ground states in Ising models with competing interactions. Communications in Mathematical Physics. 2016;347(3):983-1007. doi:10.1007/s00220-016-2665-0 apa: Giuliani, A., & Seiringer, R. (2016). Periodic striped ground states in Ising models with competing interactions. Communications in Mathematical Physics. Springer. https://doi.org/10.1007/s00220-016-2665-0 chicago: Giuliani, Alessandro, and Robert Seiringer. “Periodic Striped Ground States in Ising Models with Competing Interactions.” Communications in Mathematical Physics. Springer, 2016. https://doi.org/10.1007/s00220-016-2665-0. ieee: A. Giuliani and R. Seiringer, “Periodic striped ground states in Ising models with competing interactions,” Communications in Mathematical Physics, vol. 347, no. 3. Springer, pp. 983–1007, 2016. ista: Giuliani A, Seiringer R. 2016. Periodic striped ground states in Ising models with competing interactions. Communications in Mathematical Physics. 347(3), 983–1007. mla: Giuliani, Alessandro, and Robert Seiringer. “Periodic Striped Ground States in Ising Models with Competing Interactions.” Communications in Mathematical Physics, vol. 347, no. 3, Springer, 2016, pp. 983–1007, doi:10.1007/s00220-016-2665-0. short: A. Giuliani, R. Seiringer, Communications in Mathematical Physics 347 (2016) 983–1007. date_created: 2018-12-11T11:51:11Z date_published: 2016-11-01T00:00:00Z date_updated: 2025-09-22T08:30:16Z day: '01' ddc: - '510' - '530' department: - _id: RoSe doi: 10.1007/s00220-016-2665-0 external_id: isi: - '000385162900010' file: - access_level: open_access checksum: 3c6e08c048fc462e312788be72874bb1 content_type: application/pdf creator: system date_created: 2018-12-12T10:09:02Z date_updated: 2020-07-14T12:44:42Z file_id: '4725' file_name: IST-2016-688-v1+1_s00220-016-2665-0.pdf file_size: 794983 relation: main_file file_date_updated: 2020-07-14T12:44:42Z fulldoi: https://doi.org/10.1007/s00220-016-2665-0 has_accepted_license: '1' intvolume: ' 347' isi: 1 issue: '3' language: - iso: eng month: '11' oa: 1 oa_version: Published Version page: 983 - 1007 project: - _id: 25C878CE-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: P27533_N27 name: Structure of the Excitation Spectrum for Many-Body Quantum Systems - _id: B67AFEDC-15C9-11EA-A837-991A96BB2854 name: IST Austria Open Access Fund publication: Communications in Mathematical Physics publication_status: published publisher: Springer publist_id: '6025' pubrep_id: '688' quality_controlled: '1' scopus_import: '1' status: public title: Periodic striped ground states in Ising models with competing interactions tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 347 year: '2016' ... --- _id: '1292' abstract: - lang: eng text: We give explicit formulas and algorithms for the computation of the Thurston–Bennequin invariant of a nullhomologous Legendrian knot on a page of a contact open book and on Heegaard surfaces in convex position. Furthermore, we extend the results to rationally nullhomologous knots in arbitrary 3-manifolds. acknowledgement: "The authors are veryg rateful to Hansj ̈org Geiges \r\nfor fruitful discussions and advice and Christian Evers for helpful remarks on a draft version." article_processing_charge: No arxiv: 1 author: - first_name: Sebastian full_name: Durst, Sebastian last_name: Durst - first_name: Marc full_name: Kegel, Marc last_name: Kegel - first_name: Mirko D full_name: Klukas, Mirko D id: 34927512-F248-11E8-B48F-1D18A9856A87 last_name: Klukas citation: ama: Durst S, Kegel M, Klukas MD. Computing the Thurston–Bennequin invariant in open books. Acta Mathematica Hungarica. 2016;150(2):441-455. doi:10.1007/s10474-016-0648-4 apa: Durst, S., Kegel, M., & Klukas, M. D. (2016). Computing the Thurston–Bennequin invariant in open books. Acta Mathematica Hungarica. Springer. https://doi.org/10.1007/s10474-016-0648-4 chicago: Durst, Sebastian, Marc Kegel, and Mirko D Klukas. “Computing the Thurston–Bennequin Invariant in Open Books.” Acta Mathematica Hungarica. Springer, 2016. https://doi.org/10.1007/s10474-016-0648-4. ieee: S. Durst, M. Kegel, and M. D. Klukas, “Computing the Thurston–Bennequin invariant in open books,” Acta Mathematica Hungarica, vol. 150, no. 2. Springer, pp. 441–455, 2016. ista: Durst S, Kegel M, Klukas MD. 2016. Computing the Thurston–Bennequin invariant in open books. Acta Mathematica Hungarica. 150(2), 441–455. mla: Durst, Sebastian, et al. “Computing the Thurston–Bennequin Invariant in Open Books.” Acta Mathematica Hungarica, vol. 150, no. 2, Springer, 2016, pp. 441–55, doi:10.1007/s10474-016-0648-4. short: S. Durst, M. Kegel, M.D. Klukas, Acta Mathematica Hungarica 150 (2016) 441–455. corr_author: '1' date_created: 2018-12-11T11:51:11Z date_published: 2016-12-01T00:00:00Z date_updated: 2025-09-22T08:29:12Z day: '01' department: - _id: HeEd doi: 10.1007/s10474-016-0648-4 external_id: arxiv: - '1605.00794' isi: - '000387471100014' fulldoi: https://doi.org/10.1007/s10474-016-0648-4 intvolume: ' 150' isi: 1 issue: '2' language: - iso: eng main_file_link: - open_access: '1' url: https://arxiv.org/abs/1605.00794 month: '12' oa: 1 oa_version: Preprint page: 441 - 455 publication: Acta Mathematica Hungarica publication_status: published publisher: Springer publist_id: '6023' quality_controlled: '1' scopus_import: '1' status: public title: Computing the Thurston–Bennequin invariant in open books type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 150 year: '2016' ... --- _id: '1293' abstract: - lang: eng text: For a graph G with p vertices the closed convex cone S⪰0(G) consists of all real positive semidefinite p×p matrices whose sparsity pattern is given by G, that is, those matrices with zeros in the off-diagonal entries corresponding to nonedges of G. The extremal rays of this cone and their associated ranks have applications to matrix completion problems, maximum likelihood estimation in Gaussian graphical models in statistics, and Gauss elimination for sparse matrices. While the maximum rank of an extremal ray in S⪰0(G), known as the sparsity order of G, has been characterized for different classes of graphs, we here study all possible extremal ranks of S⪰0(G). We investigate when the geometry of the (±1)-cut polytope of G yields a polyhedral characterization of the set of extremal ranks of S⪰0(G). For a graph G without K5 minors, we show that appropriately chosen normal vectors to the facets of the (±1)-cut polytope of G specify the off-diagonal entries of extremal matrices in S⪰0(G). We also prove that for appropriately chosen scalars the constant term of the linear equation of each facet-supporting hyperplane is the rank of its corresponding extremal matrix in S⪰0(G). Furthermore, we show that if G is series-parallel then this gives a complete characterization of all possible extremal ranks of S⪰0(G). Consequently, the sparsity order problem for series-parallel graphs can be solved in terms of polyhedral geometry. acknowledgement: We wish to thank Alexander Engström and Bernd Sturmfels for various valuable discussions and insights. We also thank the two anonymous referees for their thoughtful feedback on the paper. CU was partially supported by the Austrian Science Fund (FWF) Y 903-N35. article_processing_charge: No arxiv: 1 author: - first_name: Liam T full_name: Solus, Liam T id: 2AADA620-F248-11E8-B48F-1D18A9856A87 last_name: Solus - first_name: Caroline full_name: Uhler, Caroline id: 49ADD78E-F248-11E8-B48F-1D18A9856A87 last_name: Uhler orcid: 0000-0002-7008-0216 - first_name: Ruriko full_name: Yoshida, Ruriko last_name: Yoshida citation: ama: Solus LT, Uhler C, Yoshida R. Extremal positive semidefinite matrices whose sparsity pattern is given by graphs without K5 minors. Linear Algebra and Its Applications. 2016;509:247-275. doi:10.1016/j.laa.2016.07.026 apa: Solus, L. T., Uhler, C., & Yoshida, R. (2016). Extremal positive semidefinite matrices whose sparsity pattern is given by graphs without K5 minors. Linear Algebra and Its Applications. Elsevier. https://doi.org/10.1016/j.laa.2016.07.026 chicago: Solus, Liam T, Caroline Uhler, and Ruriko Yoshida. “Extremal Positive Semidefinite Matrices Whose Sparsity Pattern Is given by Graphs without K5 Minors.” Linear Algebra and Its Applications. Elsevier, 2016. https://doi.org/10.1016/j.laa.2016.07.026. ieee: L. T. Solus, C. Uhler, and R. Yoshida, “Extremal positive semidefinite matrices whose sparsity pattern is given by graphs without K5 minors,” Linear Algebra and Its Applications, vol. 509. Elsevier, pp. 247–275, 2016. ista: Solus LT, Uhler C, Yoshida R. 2016. Extremal positive semidefinite matrices whose sparsity pattern is given by graphs without K5 minors. Linear Algebra and Its Applications. 509, 247–275. mla: Solus, Liam T., et al. “Extremal Positive Semidefinite Matrices Whose Sparsity Pattern Is given by Graphs without K5 Minors.” Linear Algebra and Its Applications, vol. 509, Elsevier, 2016, pp. 247–75, doi:10.1016/j.laa.2016.07.026. short: L.T. Solus, C. Uhler, R. Yoshida, Linear Algebra and Its Applications 509 (2016) 247–275. date_created: 2018-12-11T11:51:11Z date_published: 2016-11-15T00:00:00Z date_updated: 2025-09-22T08:29:45Z day: '15' department: - _id: CaUh doi: 10.1016/j.laa.2016.07.026 external_id: arxiv: - '1506.06702' isi: - '000385338000012' fulldoi: https://doi.org/10.1016/j.laa.2016.07.026 intvolume: ' 509' isi: 1 language: - iso: eng main_file_link: - open_access: '1' url: https://arxiv.org/abs/1506.06702 month: '11' oa: 1 oa_version: Preprint page: 247 - 275 project: - _id: 2530CA10-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: Y 903-N35 name: 'Gaussian Graphical Models: Theory and Applications' publication: Linear Algebra and Its Applications publication_status: published publisher: Elsevier publist_id: '6024' quality_controlled: '1' scopus_import: '1' status: public title: Extremal positive semidefinite matrices whose sparsity pattern is given by graphs without K5 minors type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 509 year: '2016' ... --- _id: '1295' abstract: - lang: eng text: Voronoi diagrams and Delaunay triangulations have been extensively used to represent and compute geometric features of point configurations. We introduce a generalization to poset diagrams and poset complexes, which contain order-k and degree-k Voronoi diagrams and their duals as special cases. Extending a result of Aurenhammer from 1990, we show how to construct poset diagrams as weighted Voronoi diagrams of average balls. acknowledgement: This work is partially supported by the Toposys project FP7-ICT-318493-STREP, and by ESF under the ACAT Research Network Programme. author: - first_name: Herbert full_name: Edelsbrunner, Herbert id: 3FB178DA-F248-11E8-B48F-1D18A9856A87 last_name: Edelsbrunner orcid: 0000-0002-9823-6833 - first_name: Mabel full_name: Iglesias Ham, Mabel id: 41B58C0C-F248-11E8-B48F-1D18A9856A87 last_name: Iglesias Ham citation: ama: 'Edelsbrunner H, Iglesias Ham M. Multiple covers with balls II: Weighted averages. Electronic Notes in Discrete Mathematics. 2016;54:169-174. doi:10.1016/j.endm.2016.09.030' apa: 'Edelsbrunner, H., & Iglesias Ham, M. (2016). Multiple covers with balls II: Weighted averages. Electronic Notes in Discrete Mathematics. Elsevier. https://doi.org/10.1016/j.endm.2016.09.030' chicago: 'Edelsbrunner, Herbert, and Mabel Iglesias Ham. “Multiple Covers with Balls II: Weighted Averages.” Electronic Notes in Discrete Mathematics. Elsevier, 2016. https://doi.org/10.1016/j.endm.2016.09.030.' ieee: 'H. Edelsbrunner and M. Iglesias Ham, “Multiple covers with balls II: Weighted averages,” Electronic Notes in Discrete Mathematics, vol. 54. Elsevier, pp. 169–174, 2016.' ista: 'Edelsbrunner H, Iglesias Ham M. 2016. Multiple covers with balls II: Weighted averages. Electronic Notes in Discrete Mathematics. 54, 169–174.' mla: 'Edelsbrunner, Herbert, and Mabel Iglesias Ham. “Multiple Covers with Balls II: Weighted Averages.” Electronic Notes in Discrete Mathematics, vol. 54, Elsevier, 2016, pp. 169–74, doi:10.1016/j.endm.2016.09.030.' short: H. Edelsbrunner, M. Iglesias Ham, Electronic Notes in Discrete Mathematics 54 (2016) 169–174. corr_author: '1' date_created: 2018-12-11T11:51:12Z date_published: 2016-10-01T00:00:00Z date_updated: 2024-10-09T20:57:05Z day: '01' department: - _id: HeEd doi: 10.1016/j.endm.2016.09.030 ec_funded: 1 fulldoi: https://doi.org/10.1016/j.endm.2016.09.030 intvolume: ' 54' language: - iso: eng month: '10' oa_version: None page: 169 - 174 project: - _id: 255D761E-B435-11E9-9278-68D0E5697425 call_identifier: FP7 grant_number: '318493' name: Topological Complex Systems publication: Electronic Notes in Discrete Mathematics publication_status: published publisher: Elsevier publist_id: '5976' quality_controlled: '1' scopus_import: 1 status: public title: 'Multiple covers with balls II: Weighted averages' type: journal_article user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87 volume: 54 year: '2016' ... --- OA_type: closed access _id: '1303' abstract: - lang: eng text: In bright light, cone-photoreceptors are active and colour vision derives from a comparison of signals in cones with different visual pigments. This comparison begins in the retina, where certain retinal ganglion cells have 'colour-opponent' visual responses-excited by light of one colour and suppressed by another colour. In dim light, rod-photoreceptors are active, but colour vision is impossible because they all use the same visual pigment. Instead, the rod signals are thought to splice into retinal circuits at various points, in synergy with the cone signals. Here we report a new circuit for colour vision that challenges these expectations. A genetically identified type of mouse retinal ganglion cell called JAMB (J-RGC), was found to have colour-opponent responses, OFF to ultraviolet (UV) light and ON to green light. Although the mouse retina contains a green-sensitive cone, the ON response instead originates in rods. Rods and cones both contribute to the response over several decades of light intensity. Remarkably, the rod signal in this circuit is antagonistic to that from cones. For rodents, this UV-green channel may play a role in social communication, as suggested by spectral measurements from the environment. In the human retina, all of the components for this circuit exist as well, and its function can explain certain experiences of colour in dim lights, such as a 'blue shift' in twilight. The discovery of this genetically defined pathway will enable new targeted studies of colour processing in the brain. acknowledgement: This work was supported by grants to M.M. from the NIH and to M.J. from The International Human Frontier Science Program Organization. article_processing_charge: No article_type: letter_note author: - first_name: Maximilian A full_name: Jösch, Maximilian A id: 2BD278E6-F248-11E8-B48F-1D18A9856A87 last_name: Jösch orcid: 0000-0002-3937-1330 - first_name: Markus full_name: Meister, Markus last_name: Meister citation: ama: Jösch MA, Meister M. A neuronal circuit for colour vision based on rod-cone opponency. Nature. 2016;532(7598):236-239. doi:10.1038/nature17158 apa: Jösch, M. A., & Meister, M. (2016). A neuronal circuit for colour vision based on rod-cone opponency. Nature. Nature Publishing Group. https://doi.org/10.1038/nature17158 chicago: Jösch, Maximilian A, and Markus Meister. “A Neuronal Circuit for Colour Vision Based on Rod-Cone Opponency.” Nature. Nature Publishing Group, 2016. https://doi.org/10.1038/nature17158. ieee: M. A. Jösch and M. Meister, “A neuronal circuit for colour vision based on rod-cone opponency,” Nature, vol. 532, no. 7598. Nature Publishing Group, pp. 236–239, 2016. ista: Jösch MA, Meister M. 2016. A neuronal circuit for colour vision based on rod-cone opponency. Nature. 532(7598), 236–239. mla: Jösch, Maximilian A., and Markus Meister. “A Neuronal Circuit for Colour Vision Based on Rod-Cone Opponency.” Nature, vol. 532, no. 7598, Nature Publishing Group, 2016, pp. 236–39, doi:10.1038/nature17158. short: M.A. Jösch, M. Meister, Nature 532 (2016) 236–239. date_created: 2018-12-11T11:51:15Z date_published: 2016-04-14T00:00:00Z date_updated: 2026-05-18T12:17:05Z day: '14' doi: 10.1038/nature17158 extern: '1' external_id: pmid: - '27049951' fulldoi: https://doi.org/10.1038/nature17158 intvolume: ' 532' issue: '7598' language: - iso: eng month: '04' oa_version: None page: 236 - 239 pmid: 1 publication: Nature publication_status: published publisher: Nature Publishing Group publist_id: '5966' quality_controlled: '1' scopus_import: '1' status: public title: A neuronal circuit for colour vision based on rod-cone opponency type: journal_article user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd volume: 532 year: '2016' ... --- DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '1306' abstract: - lang: eng text: 'Resolving patterns of synaptic connectivity in neural circuits currently requires serial section electron microscopy. However, complete circuit reconstruction is prohibitively slow and may not be necessary for many purposes such as comparing neuronal structure and connectivity among multiple animals. Here, we present an alternative strategy, targeted reconstruction of specific neuronal types. We used viral vectors to deliver peroxidase derivatives, which catalyze production of an electron-dense tracer, to genetically identify neurons, and developed a protocol that enhances the electron-density of the labeled cells while retaining the quality of the ultrastructure. The high contrast of the marked neurons enabled two innovations that speed data acquisition: targeted high-resolution reimaging of regions selected from rapidly-acquired lower resolution reconstruction, and an unsupervised segmentation algorithm. This pipeline reduces imaging and reconstruction times by two orders of magnitude, facilitating directed inquiry of circuit motifs.' acknowledgement: 'This work was supported by NIH grant NS76467 to MM, JL and JRS, an HHMI Collaborative Innovation Award to JRS, an IARPA contract #D16PC00002 to WJS and by The International Human Frontier Science Program Organization fellowship to MJ.' article_processing_charge: No article_type: original author: - first_name: Maximilian A full_name: Jösch, Maximilian A id: 2BD278E6-F248-11E8-B48F-1D18A9856A87 last_name: Jösch orcid: 0000-0002-3937-1330 - first_name: David full_name: Mankus, David last_name: Mankus - first_name: Masahito full_name: Yamagata, Masahito last_name: Yamagata - first_name: Ali full_name: Shahbazi, Ali last_name: Shahbazi - first_name: Richard full_name: Schalek, Richard last_name: Schalek - first_name: Adi full_name: Suissa Peleg, Adi last_name: Suissa Peleg - first_name: Markus full_name: Meister, Markus last_name: Meister - first_name: Jeff full_name: Lichtman, Jeff last_name: Lichtman - first_name: Walter full_name: Scheirer, Walter last_name: Scheirer - first_name: Joshua full_name: Sanes, Joshua last_name: Sanes citation: ama: Jösch MA, Mankus D, Yamagata M, et al. Reconstruction of genetically identified neurons imaged by serial-section electron microscopy. eLife. 2016;5(2016JULY). doi:10.7554/eLife.15015 apa: Jösch, M. A., Mankus, D., Yamagata, M., Shahbazi, A., Schalek, R., Suissa Peleg, A., … Sanes, J. (2016). Reconstruction of genetically identified neurons imaged by serial-section electron microscopy. ELife. Sciences Publications. https://doi.org/10.7554/eLife.15015 chicago: Jösch, Maximilian A, David Mankus, Masahito Yamagata, Ali Shahbazi, Richard Schalek, Adi Suissa Peleg, Markus Meister, Jeff Lichtman, Walter Scheirer, and Joshua Sanes. “Reconstruction of Genetically Identified Neurons Imaged by Serial-Section Electron Microscopy.” ELife. Sciences Publications, 2016. https://doi.org/10.7554/eLife.15015. ieee: M. A. Jösch et al., “Reconstruction of genetically identified neurons imaged by serial-section electron microscopy,” eLife, vol. 5, no. 2016JULY. Sciences Publications, 2016. ista: Jösch MA, Mankus D, Yamagata M, Shahbazi A, Schalek R, Suissa Peleg A, Meister M, Lichtman J, Scheirer W, Sanes J. 2016. Reconstruction of genetically identified neurons imaged by serial-section electron microscopy. eLife. 5(2016JULY). mla: Jösch, Maximilian A., et al. “Reconstruction of Genetically Identified Neurons Imaged by Serial-Section Electron Microscopy.” ELife, vol. 5, no. 2016JULY, Sciences Publications, 2016, doi:10.7554/eLife.15015. short: M.A. Jösch, D. Mankus, M. Yamagata, A. Shahbazi, R. Schalek, A. Suissa Peleg, M. Meister, J. Lichtman, W. Scheirer, J. Sanes, ELife 5 (2016). date_created: 2018-12-11T11:51:16Z date_published: 2016-07-07T00:00:00Z date_updated: 2026-05-18T12:14:26Z day: '07' doi: 10.7554/eLife.15015 extern: '1' external_id: pmid: - '27383271' fulldoi: https://doi.org/10.7554/eLife.15015 intvolume: ' 5' issue: 2016JULY language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.7554/eLife.15015 month: '07' oa: 1 oa_version: Published Version pmid: 1 publication: eLife publication_identifier: eissn: - 2050-084X publication_status: published publisher: Sciences Publications publist_id: '5965' quality_controlled: '1' scopus_import: '1' status: public title: Reconstruction of genetically identified neurons imaged by serial-section electron microscopy tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd volume: 5 year: '2016' ... --- OA_type: closed access _id: '1315' abstract: - lang: eng text: We prove optimal second order convergence of a modified lowest-order Brezzi-Douglas-Marini (BDM1) mixed finite element scheme for advection-diffusion problems in divergence form. If advection is present, it is known that the total flux is approximated only with first-order accuracy by the classical BDM1 mixed method, which is suboptimal since the same order of convergence is obtained if the computationally less expensive Raviart-Thomas (RT0) element is used. The modification that was first proposed by Brunner et al. [Adv. Water Res., 35 (2012),pp. 163-171] is based on the hybrid problem formulation and consists in using the Lagrange multipliers for the discretization of the advective term instead of the cellwise constant approximation of the scalar unknown. article_processing_charge: No article_type: original author: - first_name: Fabian full_name: Brunner, Fabian last_name: Brunner - first_name: Julian L full_name: Fischer, Julian L id: 2C12A0B0-F248-11E8-B48F-1D18A9856A87 last_name: Fischer orcid: 0000-0002-0479-558X - first_name: Peter full_name: Knabner, Peter last_name: Knabner citation: ama: Brunner F, Fischer JL, Knabner P. Analysis of a modified second-order mixed hybrid BDM1 finite element method for transport problems in divergence form. Journal on Numerical Analysis. 2016;54(4):2359-2378. doi:10.1137/15M1035379 apa: Brunner, F., Fischer, J. L., & Knabner, P. (2016). Analysis of a modified second-order mixed hybrid BDM1 finite element method for transport problems in divergence form. Journal on Numerical Analysis. Society for Industrial and Applied Mathematics . https://doi.org/10.1137/15M1035379 chicago: Brunner, Fabian, Julian L Fischer, and Peter Knabner. “Analysis of a Modified Second-Order Mixed Hybrid BDM1 Finite Element Method for Transport Problems in Divergence Form.” Journal on Numerical Analysis. Society for Industrial and Applied Mathematics , 2016. https://doi.org/10.1137/15M1035379. ieee: F. Brunner, J. L. Fischer, and P. Knabner, “Analysis of a modified second-order mixed hybrid BDM1 finite element method for transport problems in divergence form,” Journal on Numerical Analysis, vol. 54, no. 4. Society for Industrial and Applied Mathematics , pp. 2359–2378, 2016. ista: Brunner F, Fischer JL, Knabner P. 2016. Analysis of a modified second-order mixed hybrid BDM1 finite element method for transport problems in divergence form. Journal on Numerical Analysis. 54(4), 2359–2378. mla: Brunner, Fabian, et al. “Analysis of a Modified Second-Order Mixed Hybrid BDM1 Finite Element Method for Transport Problems in Divergence Form.” Journal on Numerical Analysis, vol. 54, no. 4, Society for Industrial and Applied Mathematics , 2016, pp. 2359–78, doi:10.1137/15M1035379. short: F. Brunner, J.L. Fischer, P. Knabner, Journal on Numerical Analysis 54 (2016) 2359–2378. date_created: 2018-12-11T11:51:19Z date_published: 2016-08-02T00:00:00Z date_updated: 2026-05-18T09:48:39Z day: '02' doi: 10.1137/15M1035379 extern: '1' fulldoi: https://doi.org/10.1137/15M1035379 intvolume: ' 54' issue: '4' keyword: - advection-diffusion problem - mixed finite element methods - suboptimal conver-gence - optimal convergence language: - iso: eng month: '08' oa_version: None page: 2359 - 2378 publication: Journal on Numerical Analysis publication_identifier: eissn: - 1095-7170 issnl: - 0036-1429 publication_status: published publisher: 'Society for Industrial and Applied Mathematics ' publist_id: '5954' quality_controlled: '1' status: public title: Analysis of a modified second-order mixed hybrid BDM1 finite element method for transport problems in divergence form type: journal_article user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd volume: 54 year: '2016' ... --- OA_type: closed access _id: '1317' abstract: - lang: eng text: We analyze the behaviour of free boundaries in thin-film flow in the regime of strong slippage n∈[1,2) and in the regime of very weak slippage n∈,3) qualitatively and quantitatively. In the regime of strong slippage, we construct initial data which are bounded from above by the steady state but for which nevertheless instantaneous forward motion of the free boundary occurs. This shows that the initial behaviour of the free boundary is not determined just by the growth of the initial data at the free boundary. Note that this is a new phenomenon for degenerate parabolic equations which is specific for higher-order equations. Furthermore, this result resolves a controversy in the literature over optimality of sufficient conditions for the occurrence of a waiting time phenomenon. In contrast, in the regime of very weak slippage we derive lower bounds on free boundary propagation which are optimal in the sense that they coincide up to a constant factor with the known upper bounds. In particular, in this regime the growth of the initial data at the free boundary fully determines the initial behaviour of the interface. article_processing_charge: No article_type: original author: - first_name: Julian L full_name: Fischer, Julian L id: 2C12A0B0-F248-11E8-B48F-1D18A9856A87 last_name: Fischer orcid: 0000-0002-0479-558X citation: ama: 'Fischer JL. Behaviour of free boundaries in thin-film flow: The regime of strong slippage and the regime of very weak slippage. Annales de l’Institut Henri Poincare (C) Non Linear Analysis. 2016;33(5):1301-1327. doi:10.1016/j.anihpc.2015.05.001' apa: 'Fischer, J. L. (2016). Behaviour of free boundaries in thin-film flow: The regime of strong slippage and the regime of very weak slippage. Annales de l’Institut Henri Poincare (C) Non Linear Analysis. EMS Press. https://doi.org/10.1016/j.anihpc.2015.05.001' chicago: 'Fischer, Julian L. “Behaviour of Free Boundaries in Thin-Film Flow: The Regime of Strong Slippage and the Regime of Very Weak Slippage.” Annales de l’Institut Henri Poincare (C) Non Linear Analysis. EMS Press, 2016. https://doi.org/10.1016/j.anihpc.2015.05.001.' ieee: 'J. L. Fischer, “Behaviour of free boundaries in thin-film flow: The regime of strong slippage and the regime of very weak slippage,” Annales de l’Institut Henri Poincare (C) Non Linear Analysis, vol. 33, no. 5. EMS Press, pp. 1301–1327, 2016.' ista: 'Fischer JL. 2016. Behaviour of free boundaries in thin-film flow: The regime of strong slippage and the regime of very weak slippage. Annales de l’Institut Henri Poincare (C) Non Linear Analysis. 33(5), 1301–1327.' mla: 'Fischer, Julian L. “Behaviour of Free Boundaries in Thin-Film Flow: The Regime of Strong Slippage and the Regime of Very Weak Slippage.” Annales de l’Institut Henri Poincare (C) Non Linear Analysis, vol. 33, no. 5, EMS Press, 2016, pp. 1301–27, doi:10.1016/j.anihpc.2015.05.001.' short: J.L. Fischer, Annales de l’Institut Henri Poincare (C) Non Linear Analysis 33 (2016) 1301–1327. date_created: 2018-12-11T11:51:20Z date_published: 2016-10-01T00:00:00Z date_updated: 2026-05-06T07:02:19Z day: '01' doi: 10.1016/j.anihpc.2015.05.001 extern: '1' fulldoi: https://doi.org/10.1016/j.anihpc.2015.05.001 intvolume: ' 33' issue: '5' keyword: - Thin-film equation - Free boundary - Waiting time - Qualitative behaviour - Higher-order parabolic equation - Degenerate parabolic equation language: - iso: eng month: '10' oa_version: None page: 1301 - 1327 publication: Annales de l'Institut Henri Poincare (C) Non Linear Analysis publication_identifier: eissn: - 1873-1430 issnl: - 0294-1449 publication_status: published publisher: EMS Press publist_id: '5952' quality_controlled: '1' status: public title: 'Behaviour of free boundaries in thin-film flow: The regime of strong slippage and the regime of very weak slippage' type: journal_article user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 33 year: '2016' ... --- OA_place: publisher OA_type: gold _id: '1318' abstract: - lang: eng text: 'We develop a large-scale regularity theory of higher order for divergence-form elliptic equations with heterogeneous coefficient fields a in the context of stochastic homogenization. The large-scale regularity of a-harmonic functions is encoded by Liouville principles: The space of a-harmonic functions that grow at most like a polynomial of degree k has the same dimension as in the constant-coefficient case. This result can be seen as the qualitative side of a large-scale Ck,α-regularity theory, which in the present work is developed in the form of a corresponding Ck,α-“excess decay” estimate: For a given a-harmonic function u on a ball BR, its energy distance on some ball Br to the above space of a-harmonic functions that grow at most like a polynomial of degree k has the natural decay in the radius r above some minimal radius r0. Though motivated by stochastic homogenization, the contribution of this paper is of purely deterministic nature: We work under the assumption that for the given realization a of the coefficient field, the couple (φ, σ) of scalar and vector potentials of the harmonic coordinates, where φ is the usual corrector, grows sublinearly in a mildly quantified way. We then construct “kth-order correctors” and thereby the space of a-harmonic functions that grow at most like a polynomial of degree k, establish the above excess decay, and then the corresponding Liouville principle.' article_processing_charge: No article_type: original arxiv: 1 author: - first_name: Julian L full_name: Fischer, Julian L id: 2C12A0B0-F248-11E8-B48F-1D18A9856A87 last_name: Fischer orcid: 0000-0002-0479-558X - first_name: Felix full_name: Otto, Felix last_name: Otto citation: ama: Fischer JL, Otto F. A higher-order large scale regularity theory for random elliptic operators. Communications in Partial Differential Equations. 2016;41(7):1108-1148. doi:10.1080/03605302.2016.1179318 apa: Fischer, J. L., & Otto, F. (2016). A higher-order large scale regularity theory for random elliptic operators. Communications in Partial Differential Equations. Taylor & Francis. https://doi.org/10.1080/03605302.2016.1179318 chicago: Fischer, Julian L, and Felix Otto. “A Higher-Order Large Scale Regularity Theory for Random Elliptic Operators.” Communications in Partial Differential Equations. Taylor & Francis, 2016. https://doi.org/10.1080/03605302.2016.1179318. ieee: J. L. Fischer and F. Otto, “A higher-order large scale regularity theory for random elliptic operators,” Communications in Partial Differential Equations, vol. 41, no. 7. Taylor & Francis, pp. 1108–1148, 2016. ista: Fischer JL, Otto F. 2016. A higher-order large scale regularity theory for random elliptic operators. Communications in Partial Differential Equations. 41(7), 1108–1148. mla: Fischer, Julian L., and Felix Otto. “A Higher-Order Large Scale Regularity Theory for Random Elliptic Operators.” Communications in Partial Differential Equations, vol. 41, no. 7, Taylor & Francis, 2016, pp. 1108–48, doi:10.1080/03605302.2016.1179318. short: J.L. Fischer, F. Otto, Communications in Partial Differential Equations 41 (2016) 1108–1148. date_created: 2018-12-11T11:51:20Z date_published: 2016-06-16T00:00:00Z date_updated: 2026-05-06T07:05:16Z day: '16' doi: 10.1080/03605302.2016.1179318 extern: '1' external_id: arxiv: - '1503.07578' fulldoi: https://doi.org/10.1080/03605302.2016.1179318 intvolume: ' 41' issue: '7' keyword: - Ck - α regularity - higher-ordercorrectors - Liouville principle - random elliptic operator - regularity theory - stochastic homogenization language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.1080/03605302.2016.1179318 month: '06' oa: 1 oa_version: Published Version page: 1108 - 1148 publication: Communications in Partial Differential Equations publication_identifier: eissn: - 1532-4133 issnl: - 0360-5302 publication_status: published publisher: Taylor & Francis publist_id: '5953' quality_controlled: '1' status: public title: A higher-order large scale regularity theory for random elliptic operators tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 41 year: '2016' ... --- _id: '1319' abstract: - lang: eng text: We present a novel optimization-based algorithm for the design and fabrication of customized, deformable input devices, capable of continuously sensing their deformation. We propose to embed piezoresistive sensing elements into flexible 3D printed objects. These sensing elements are then utilized to recover rich and natural user interactions at runtime. Designing such objects is a challenging and hard problem if attempted manually for all but the simplest geometries and deformations. Our method simultaneously optimizes the internal routing of the sensing elements and computes a mapping from low-level sensor readings to user-specified outputs in order to minimize reconstruction error. We demonstrate the power and flexibility of the approach by designing and fabricating a set of flexible input devices. Our results indicate that the optimization-based design greatly outperforms manual routings in terms of reconstruction accuracy and thus interaction fidelity. acknowledgement: "We thank Damian Karrer, Rocco Ghielmini and Jemin\r\nHwangbo for their help in our initial explorations. We would\r\nlike to thank Christian Schumacher for creating the video and\r\nC\r\n ́\r\necile Edwards-Rietmann for providing the voiceover. Mau-\r\nrizio Nitti helped us in designing our 3D characters. We thank\r\nChiara Daraio for insightful discussions on material proper-\r\nties and 3D printing. We also thank the CHI reviewers for\r\ntheir feedback and guidance. Fabrizio Pece was supported by\r\nan ETH/Marie Curie fellowship (FEL-3314-1)." article_processing_charge: No author: - first_name: Moritz full_name: Bächer, Moritz last_name: Bächer - first_name: Benjamin full_name: Hepp, Benjamin last_name: Hepp - first_name: Fabrizio full_name: Pece, Fabrizio last_name: Pece - first_name: Paul full_name: Kry, Paul last_name: Kry - first_name: Bernd full_name: Bickel, Bernd id: 49876194-F248-11E8-B48F-1D18A9856A87 last_name: Bickel orcid: 0000-0001-6511-9385 - first_name: Bernhard full_name: Thomaszewski, Bernhard last_name: Thomaszewski - first_name: Otmar full_name: Hilliges, Otmar last_name: Hilliges citation: ama: 'Bächer M, Hepp B, Pece F, et al. DefSense: computational design of customized deformable input devices. In: ACM; 2016:3806-3816. doi:10.1145/2858036.2858354' apa: 'Bächer, M., Hepp, B., Pece, F., Kry, P., Bickel, B., Thomaszewski, B., & Hilliges, O. (2016). DefSense: computational design of customized deformable input devices (pp. 3806–3816). Presented at the CHI: Conference on Human Factors in Computing Systems, San Jose, California, USA: ACM. https://doi.org/10.1145/2858036.2858354' chicago: 'Bächer, Moritz, Benjamin Hepp, Fabrizio Pece, Paul Kry, Bernd Bickel, Bernhard Thomaszewski, and Otmar Hilliges. “DefSense: Computational Design of Customized Deformable Input Devices,” 3806–16. ACM, 2016. https://doi.org/10.1145/2858036.2858354.' ieee: 'M. Bächer et al., “DefSense: computational design of customized deformable input devices,” presented at the CHI: Conference on Human Factors in Computing Systems, San Jose, California, USA, 2016, pp. 3806–3816.' ista: 'Bächer M, Hepp B, Pece F, Kry P, Bickel B, Thomaszewski B, Hilliges O. 2016. DefSense: computational design of customized deformable input devices. CHI: Conference on Human Factors in Computing Systems, 3806–3816.' mla: 'Bächer, Moritz, et al. DefSense: Computational Design of Customized Deformable Input Devices. ACM, 2016, pp. 3806–16, doi:10.1145/2858036.2858354.' short: M. Bächer, B. Hepp, F. Pece, P. Kry, B. Bickel, B. Thomaszewski, O. Hilliges, in:, ACM, 2016, pp. 3806–3816. conference: end_date: 2016-05-12 location: San Jose, California, USA name: 'CHI: Conference on Human Factors in Computing Systems' start_date: 2016-05-07 date_created: 2018-12-11T11:51:21Z date_published: 2016-05-07T00:00:00Z date_updated: 2025-09-22T08:28:21Z day: '07' department: - _id: BeBi doi: 10.1145/2858036.2858354 external_id: isi: - '000380532903074' fulldoi: https://doi.org/10.1145/2858036.2858354 isi: 1 language: - iso: eng month: '05' oa_version: None page: 3806 - 3816 publication_status: published publisher: ACM publist_id: '5951' quality_controlled: '1' scopus_import: '1' status: public title: 'DefSense: computational design of customized deformable input devices' type: conference user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 year: '2016' ... --- OA_place: repository OA_type: green _id: '1320' abstract: - lang: eng text: 'In recent years, several biomolecular systems have been shown to be scale-invariant (SI), i.e. to show the same output dynamics when exposed to geometrically scaled input signals (u → pu, p > 0) after pre-adaptation to accordingly scaled constant inputs. In this article, we show that SI systems-as well as systems invariant with respect to other input transformations-can realize nonlinear differential operators: when excited by inputs obeying functional forms characteristic for a given class of invariant systems, the systems'' outputs converge to constant values directly quantifying the speed of the input.' acknowledgement: The research leading to these results has received funding from the People Programme (Marie Curie Actions) of the European Union's Seventh Framework Programme (FP7/2007-2013) under REA grant agreement n° [291734]. Work supported in part by grants AFOSR FA9550-14-1-0060 and NIH 1R01GM100473. article_number: '7526722' article_processing_charge: No author: - first_name: Moritz full_name: Lang, Moritz id: 29E0800A-F248-11E8-B48F-1D18A9856A87 last_name: Lang - first_name: Eduardo full_name: Sontag, Eduardo last_name: Sontag citation: ama: 'Lang M, Sontag E. Scale-invariant systems realize nonlinear differential operators. In: Vol 2016-July. IEEE; 2016. doi:10.1109/ACC.2016.7526722' apa: 'Lang, M., & Sontag, E. (2016). Scale-invariant systems realize nonlinear differential operators (Vol. 2016–July). Presented at the ACC: American Control Conference, Boston, MA, USA: IEEE. https://doi.org/10.1109/ACC.2016.7526722' chicago: Lang, Moritz, and Eduardo Sontag. “Scale-Invariant Systems Realize Nonlinear Differential Operators,” Vol. 2016–July. IEEE, 2016. https://doi.org/10.1109/ACC.2016.7526722. ieee: 'M. Lang and E. Sontag, “Scale-invariant systems realize nonlinear differential operators,” presented at the ACC: American Control Conference, Boston, MA, USA, 2016, vol. 2016–July.' ista: 'Lang M, Sontag E. 2016. Scale-invariant systems realize nonlinear differential operators. ACC: American Control Conference vol. 2016–July, 7526722.' mla: Lang, Moritz, and Eduardo Sontag. Scale-Invariant Systems Realize Nonlinear Differential Operators. Vol. 2016–July, 7526722, IEEE, 2016, doi:10.1109/ACC.2016.7526722. short: M. Lang, E. Sontag, in:, IEEE, 2016. conference: end_date: 2016-07-08 location: Boston, MA, USA name: 'ACC: American Control Conference' start_date: 2016-07-06 date_created: 2018-12-11T11:51:21Z date_published: 2016-07-28T00:00:00Z date_updated: 2025-06-25T11:46:37Z day: '28' ddc: - '003' - '621' department: - _id: CaGu - _id: GaTk doi: 10.1109/ACC.2016.7526722 ec_funded: 1 file: - access_level: open_access checksum: 7219432b43defc62a0d45f48d4ce6a19 content_type: application/pdf creator: system date_created: 2018-12-12T10:16:17Z date_updated: 2025-06-25T11:46:36Z file_id: '5203' file_name: IST-2017-810-v1+1_root.pdf file_size: 539166 relation: main_file file_date_updated: 2025-06-25T11:46:36Z fulldoi: https://doi.org/10.1109/ACC.2016.7526722 has_accepted_license: '1' language: - iso: eng month: '07' oa: 1 oa_version: Submitted Version project: - _id: 25681D80-B435-11E9-9278-68D0E5697425 call_identifier: FP7 grant_number: '291734' name: International IST Postdoc Fellowship Programme publication_status: published publisher: IEEE publist_id: '5950' pubrep_id: '810' quality_controlled: '1' scopus_import: '1' status: public title: Scale-invariant systems realize nonlinear differential operators type: conference user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 2016-July year: '2016' ... --- _id: '1322' abstract: - lang: eng text: Direct reciprocity is a major mechanism for the evolution of cooperation. Several classical studies have suggested that humans should quickly learn to adopt reciprocal strategies to establish mutual cooperation in repeated interactions. On the other hand, the recently discovered theory of ZD strategies has found that subjects who use extortionate strategies are able to exploit and subdue cooperators. Although such extortioners have been predicted to succeed in any population of adaptive opponents, theoretical follow-up studies questioned whether extortion can evolve in reality. However, most of these studies presumed that individuals have similar strategic possibilities and comparable outside options, whereas asymmetries are ubiquitous in real world applications. Here we show with a model and an economic experiment that extortionate strategies readily emerge once subjects differ in their strategic power. Our experiment combines a repeated social dilemma with asymmetric partner choice. In our main treatment there is one randomly chosen group member who is unilaterally allowed to exchange one of the other group members after every ten rounds of the social dilemma. We find that this asymmetric replacement opportunity generally promotes cooperation, but often the resulting payoff distribution reflects the underlying power structure. Almost half of the subjects in a better strategic position turn into extortioners, who quickly proceed to exploit their peers. By adapting their cooperation probabilities consistent with ZD theory, extortioners force their co-players to cooperate without being similarly cooperative themselves. Comparison to non-extortionate players under the same conditions indicates a substantial net gain to extortion. Our results thus highlight how power asymmetries can endanger mutually beneficial interactions, and transform them into exploitative relationships. In particular, our results indicate that the extortionate strategies predicted from ZD theory could play a more prominent role in our daily interactions than previously thought. acknowledgement: 'CH was funded by the Schrödinger program of the Austrian Science Fund (FWF) J3475. ' article_number: e0163867 article_processing_charge: No author: - first_name: Christian full_name: Hilbe, Christian id: 2FDF8F3C-F248-11E8-B48F-1D18A9856A87 last_name: Hilbe orcid: 0000-0001-5116-955X - first_name: Kristin full_name: Hagel, Kristin last_name: Hagel - first_name: Manfred full_name: Milinski, Manfred last_name: Milinski citation: ama: Hilbe C, Hagel K, Milinski M. Asymmetric power boosts extortion in an economic experiment. PLoS One. 2016;11(10). doi:10.1371/journal.pone.0163867 apa: Hilbe, C., Hagel, K., & Milinski, M. (2016). Asymmetric power boosts extortion in an economic experiment. PLoS One. Public Library of Science. https://doi.org/10.1371/journal.pone.0163867 chicago: Hilbe, Christian, Kristin Hagel, and Manfred Milinski. “Asymmetric Power Boosts Extortion in an Economic Experiment.” PLoS One. Public Library of Science, 2016. https://doi.org/10.1371/journal.pone.0163867. ieee: C. Hilbe, K. Hagel, and M. Milinski, “Asymmetric power boosts extortion in an economic experiment,” PLoS One, vol. 11, no. 10. Public Library of Science, 2016. ista: Hilbe C, Hagel K, Milinski M. 2016. Asymmetric power boosts extortion in an economic experiment. PLoS One. 11(10), e0163867. mla: Hilbe, Christian, et al. “Asymmetric Power Boosts Extortion in an Economic Experiment.” PLoS One, vol. 11, no. 10, e0163867, Public Library of Science, 2016, doi:10.1371/journal.pone.0163867. short: C. Hilbe, K. Hagel, M. Milinski, PLoS One 11 (2016). corr_author: '1' date_created: 2018-12-11T11:51:22Z date_published: 2016-10-04T00:00:00Z date_updated: 2025-09-22T08:27:01Z day: '04' ddc: - '004' - '006' department: - _id: KrCh doi: 10.1371/journal.pone.0163867 external_id: isi: - '000385696900024' file: - access_level: open_access checksum: 6b33e394003dfe8b4ca6be1858aaa8e3 content_type: application/pdf creator: system date_created: 2018-12-12T10:08:08Z date_updated: 2020-07-14T12:44:44Z file_id: '4668' file_name: IST-2016-716-v1+1_journal.pone.0163867.PDF file_size: 2077905 relation: main_file file_date_updated: 2020-07-14T12:44:44Z fulldoi: https://doi.org/10.1371/journal.pone.0163867 has_accepted_license: '1' intvolume: ' 11' isi: 1 issue: '10' language: - iso: eng month: '10' oa: 1 oa_version: Published Version publication: PLoS One publication_status: published publisher: Public Library of Science publist_id: '5948' pubrep_id: '716' quality_controlled: '1' related_material: record: - id: '9867' relation: research_data status: public - id: '9868' relation: research_data status: public scopus_import: '1' status: public title: Asymmetric power boosts extortion in an economic experiment tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 11 year: '2016' ... --- _id: '1323' abstract: - lang: eng text: Mossy fiber synapses on CA3 pyramidal cells are 'conditional detonators' that reliably discharge postsynaptic targets. The 'conditional' nature implies that burst activity in dentate gyrus granule cells is required for detonation. Whether single unitary excitatory postsynaptic potentials (EPSPs) trigger spikes in CA3 neurons remains unknown. Mossy fiber synapses exhibit both pronounced short-term facilitation and uniquely large post-tetanic potentiation (PTP). We tested whether PTP could convert mossy fiber synapses from subdetonator into detonator mode, using a recently developed method to selectively and noninvasively stimulate individual presynaptic terminals in rat brain slices. Unitary EPSPs failed to initiate a spike in CA3 neurons under control conditions, but reliably discharged them after induction of presynaptic short-term plasticity. Remarkably, PTP switched mossy fiber synapses into full detonators for tens of seconds. Plasticity-dependent detonation may be critical for efficient coding, storage, and recall of information in the granule cell–CA3 cell network. acknowledged_ssus: - _id: M-Shop - _id: PreCl article_number: e17977 article_processing_charge: No author: - first_name: Nicholas full_name: Vyleta, Nicholas id: 36C4978E-F248-11E8-B48F-1D18A9856A87 last_name: Vyleta - first_name: Carolina full_name: Borges Merjane, Carolina id: 4305C450-F248-11E8-B48F-1D18A9856A87 last_name: Borges Merjane orcid: 0000-0003-0005-401X - first_name: Peter M full_name: Jonas, Peter M id: 353C1B58-F248-11E8-B48F-1D18A9856A87 last_name: Jonas orcid: 0000-0001-5001-4804 citation: ama: Vyleta N, Borges Merjane C, Jonas PM. Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses. eLife. 2016;5. doi:10.7554/eLife.17977 apa: Vyleta, N., Borges Merjane, C., & Jonas, P. M. (2016). Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses. ELife. eLife Sciences Publications. https://doi.org/10.7554/eLife.17977 chicago: Vyleta, Nicholas, Carolina Borges Merjane, and Peter M Jonas. “Plasticity-Dependent, Full Detonation at Hippocampal Mossy Fiber–CA3 Pyramidal Neuron Synapses.” ELife. eLife Sciences Publications, 2016. https://doi.org/10.7554/eLife.17977. ieee: N. Vyleta, C. Borges Merjane, and P. M. Jonas, “Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses,” eLife, vol. 5. eLife Sciences Publications, 2016. ista: Vyleta N, Borges Merjane C, Jonas PM. 2016. Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses. eLife. 5, e17977. mla: Vyleta, Nicholas, et al. “Plasticity-Dependent, Full Detonation at Hippocampal Mossy Fiber–CA3 Pyramidal Neuron Synapses.” ELife, vol. 5, e17977, eLife Sciences Publications, 2016, doi:10.7554/eLife.17977. short: N. Vyleta, C. Borges Merjane, P.M. Jonas, ELife 5 (2016). corr_author: '1' date_created: 2018-12-11T11:51:22Z date_published: 2016-10-25T00:00:00Z date_updated: 2025-09-22T08:26:29Z day: '25' ddc: - '571' - '572' department: - _id: PeJo doi: 10.7554/eLife.17977 ec_funded: 1 external_id: isi: - '000387034600001' file: - access_level: open_access checksum: a7201280c571bed88ebd459ce5ce6a47 content_type: application/pdf creator: system date_created: 2018-12-12T10:17:05Z date_updated: 2020-07-14T12:44:44Z file_id: '5257' file_name: IST-2016-715-v1+1_e17977-download.pdf file_size: 1477891 relation: main_file file_date_updated: 2020-07-14T12:44:44Z fulldoi: https://doi.org/10.7554/eLife.17977 has_accepted_license: '1' intvolume: ' 5' isi: 1 language: - iso: eng month: '10' oa: 1 oa_version: Published Version project: - _id: 25C0F108-B435-11E9-9278-68D0E5697425 call_identifier: FP7 grant_number: '268548' name: Nanophysiology of fast-spiking, parvalbumin-expressing GABAergic interneurons - _id: 25B7EB9E-B435-11E9-9278-68D0E5697425 call_identifier: H2020 grant_number: '692692' name: Biophysics and circuit function of a giant cortical glutamatergic synapse publication: eLife publication_status: published publisher: eLife Sciences Publications publist_id: '5947' pubrep_id: '715' quality_controlled: '1' scopus_import: '1' status: public title: Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 5 year: '2016' ... --- _id: '1324' abstract: - lang: eng text: 'DEC-POMDPs extend POMDPs to a multi-agent setting, where several agents operate in an uncertain environment independently to achieve a joint objective. DEC-POMDPs have been studied with finite-horizon and infinite-horizon discounted-sum objectives, and there exist solvers both for exact and approximate solutions. In this work we consider Goal-DEC-POMDPs, where given a set of target states, the objective is to ensure that the target set is reached with minimal cost. We consider the indefinite-horizon (infinite-horizon with either discounted-sum, or undiscounted-sum, where absorbing goal states have zero-cost) problem. We present a new and novel method to solve the problem that extends methods for finite-horizon DEC-POMDPs and the RTDP-Bel approach for POMDPs. We present experimental results on several examples, and show that our approach presents promising results. Copyright ' article_processing_charge: No author: - first_name: Krishnendu full_name: Chatterjee, Krishnendu id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87 last_name: Chatterjee orcid: 0000-0002-4561-241X - first_name: Martin full_name: Chmelik, Martin id: 3624234E-F248-11E8-B48F-1D18A9856A87 last_name: Chmelik citation: ama: 'Chatterjee K, Chmelik M. Indefinite-horizon reachability in Goal-DEC-POMDPs. In: Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling. Vol 2016. AAAI Press; 2016:88-96. doi:10.1609/icaps.v26i1.13737' apa: 'Chatterjee, K., & Chmelik, M. (2016). Indefinite-horizon reachability in Goal-DEC-POMDPs. In Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling (Vol. 2016, pp. 88–96). London, United Kingdom: AAAI Press. https://doi.org/10.1609/icaps.v26i1.13737' chicago: Chatterjee, Krishnendu, and Martin Chmelik. “Indefinite-Horizon Reachability in Goal-DEC-POMDPs.” In Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling, 2016:88–96. AAAI Press, 2016. https://doi.org/10.1609/icaps.v26i1.13737. ieee: K. Chatterjee and M. Chmelik, “Indefinite-horizon reachability in Goal-DEC-POMDPs,” in Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling, London, United Kingdom, 2016, vol. 2016, pp. 88–96. ista: 'Chatterjee K, Chmelik M. 2016. Indefinite-horizon reachability in Goal-DEC-POMDPs. Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling. ICAPS: International Conference on Automated Planning and Scheduling vol. 2016, 88–96.' mla: Chatterjee, Krishnendu, and Martin Chmelik. “Indefinite-Horizon Reachability in Goal-DEC-POMDPs.” Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling, vol. 2016, AAAI Press, 2016, pp. 88–96, doi:10.1609/icaps.v26i1.13737. short: K. Chatterjee, M. Chmelik, in:, Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling, AAAI Press, 2016, pp. 88–96. conference: end_date: 2016-06-17 location: London, United Kingdom name: 'ICAPS: International Conference on Automated Planning and Scheduling' start_date: 2016-06-12 corr_author: '1' date_created: 2018-12-11T11:51:22Z date_published: 2016-01-01T00:00:00Z date_updated: 2025-05-19T11:03:49Z day: '01' department: - _id: KrCh doi: 10.1609/icaps.v26i1.13737 ec_funded: 1 fulldoi: https://doi.org/10.1609/icaps.v26i1.13737 intvolume: ' 2016' language: - iso: eng main_file_link: - open_access: '1' url: http://www.aaai.org/ocs/index.php/ICAPS/ICAPS16/paper/view/12999 month: '01' oa: 1 oa_version: None page: 88 - 96 project: - _id: 2584A770-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: P 23499-N23 name: Modern Graph Algorithmic Techniques in Formal Verification - _id: 2581B60A-B435-11E9-9278-68D0E5697425 call_identifier: FP7 grant_number: '279307' name: 'Quantitative Graph Games: Theory and Applications' - _id: 25832EC2-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: S 11407_N23 name: Rigorous Systems Engineering publication: Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling publication_status: published publisher: AAAI Press publist_id: '5946' quality_controlled: '1' scopus_import: '1' status: public title: Indefinite-horizon reachability in Goal-DEC-POMDPs type: conference user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 2016 year: '2016' ... --- _id: '1325' abstract: - lang: eng text: We study graphs and two-player games in which rewards are assigned to states, and the goal of the players is to satisfy or dissatisfy certain property of the generated outcome, given as a mean payoff property. Since the notion of mean-payoff does not reflect possible fluctuations from the mean-payoff along a run, we propose definitions and algorithms for capturing the stability of the system, and give algorithms for deciding if a given mean payoff and stability objective can be ensured in the system. acknowledgement: "The work has been supported by the Czech Science Foundation, grant No. 15-17564S, by EPSRC grant\r\nEP/M023656/1, and by the People Programme (Marie Curie Actions) of the European Union’s Seventh\r\nFramework Programme (FP7/2007-2013) under REA grant agreement no [291734]" alternative_title: - LIPIcs article_number: '10' author: - first_name: Tomáš full_name: Brázdil, Tomáš last_name: Brázdil - first_name: Vojtěch full_name: Forejt, Vojtěch last_name: Forejt - first_name: Antonín full_name: Kučera, Antonín last_name: Kučera - first_name: Petr full_name: Novotny, Petr id: 3CC3B868-F248-11E8-B48F-1D18A9856A87 last_name: Novotny citation: ama: 'Brázdil T, Forejt V, Kučera A, Novotný P. Stability in graphs and games. In: Vol 59. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2016. doi:10.4230/LIPIcs.CONCUR.2016.10' apa: 'Brázdil, T., Forejt, V., Kučera, A., & Novotný, P. (2016). Stability in graphs and games (Vol. 59). Presented at the CONCUR: Concurrency Theory, Quebec City, Canada: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.4230/LIPIcs.CONCUR.2016.10' chicago: Brázdil, Tomáš, Vojtěch Forejt, Antonín Kučera, and Petr Novotný. “Stability in Graphs and Games,” Vol. 59. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016. https://doi.org/10.4230/LIPIcs.CONCUR.2016.10. ieee: 'T. Brázdil, V. Forejt, A. Kučera, and P. Novotný, “Stability in graphs and games,” presented at the CONCUR: Concurrency Theory, Quebec City, Canada, 2016, vol. 59.' ista: 'Brázdil T, Forejt V, Kučera A, Novotný P. 2016. Stability in graphs and games. CONCUR: Concurrency Theory, LIPIcs, vol. 59, 10.' mla: Brázdil, Tomáš, et al. Stability in Graphs and Games. Vol. 59, 10, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016, doi:10.4230/LIPIcs.CONCUR.2016.10. short: T. Brázdil, V. Forejt, A. Kučera, P. Novotný, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016. conference: end_date: 2016-08-26 location: Quebec City, Canada name: 'CONCUR: Concurrency Theory' start_date: 2016-08-23 corr_author: '1' date_created: 2018-12-11T11:51:23Z date_published: 2016-08-01T00:00:00Z date_updated: 2024-10-09T20:57:03Z day: '01' ddc: - '004' department: - _id: KrCh doi: 10.4230/LIPIcs.CONCUR.2016.10 ec_funded: 1 file: - access_level: open_access checksum: 3c2dc6ab0358f8aa8f7aa7d6c1293159 content_type: application/pdf creator: system date_created: 2018-12-12T10:16:40Z date_updated: 2020-07-14T12:44:44Z file_id: '5229' file_name: IST-2016-665-v1+1_Forejt_et_al__Stability_in_graphs_and_games.pdf file_size: 553648 relation: main_file file_date_updated: 2020-07-14T12:44:44Z fulldoi: https://doi.org/10.4230/LIPIcs.CONCUR.2016.10 has_accepted_license: '1' intvolume: ' 59' language: - iso: eng month: '08' oa: 1 oa_version: Published Version project: - _id: 25681D80-B435-11E9-9278-68D0E5697425 call_identifier: FP7 grant_number: '291734' name: International IST Postdoc Fellowship Programme publication_status: published publisher: Schloss Dagstuhl - Leibniz-Zentrum für Informatik publist_id: '5944' pubrep_id: '665' quality_controlled: '1' scopus_import: 1 status: public title: Stability in graphs and games tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: conference user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87 volume: 59 year: '2016' ...