---
_id: '2301'
abstract:
- lang: eng
  text: We describe the design and implementation of P, a domain-specific language
    to write asynchronous event driven code. P allows the programmer to specify the
    system as a collection of interacting state machines, which communicate with each
    other using events. P unifies modeling and programming into one activity for the
    programmer. Not only can a P program be compiled into executable code, but it
    can also be tested using model checking techniques. P allows the programmer to
    specify the environment, used to &quot;close&quot; the system during testing,
    as nondeterministic ghost machines. Ghost machines are erased during compilation
    to executable code; a type system ensures that the erasure is semantics preserving.
    The P language is designed so that a P program can be checked for responsiveness-the
    ability to handle every event in a timely manner. By default, a machine needs
    to handle every event that arrives in every state. But handling every event in
    every state is impractical. The language provides a notion of deferred events
    where the programmer can annotate when she wants to delay processing an event.
    The default safety checker looks for presence of unhan-dled events. The language
    also provides default liveness checks that an event cannot be potentially deferred
    forever. P was used to implement and verify the core of the USB device driver
    stack that ships with Microsoft Windows 8. The resulting driver is more reliable
    and performs better than its prior incarnation (which did not use P); we have
    more confidence in the robustness of its design due to the language abstractions
    and verification provided by P.
author:
- first_name: Ankush
  full_name: Desai, Ankush
  last_name: Desai
- first_name: Vivek
  full_name: Gupta, Vivek
  last_name: Gupta
- first_name: Ethan
  full_name: Jackson, Ethan
  last_name: Jackson
- first_name: Shaz
  full_name: Qadeer, Shaz
  last_name: Qadeer
- first_name: Sriram
  full_name: Rajamani, Sriram
  last_name: Rajamani
- first_name: Damien
  full_name: Zufferey, Damien
  id: 4397AC76-F248-11E8-B48F-1D18A9856A87
  last_name: Zufferey
  orcid: 0000-0002-3197-8736
citation:
  ama: 'Desai A, Gupta V, Jackson E, Qadeer S, Rajamani S, Zufferey D. P: Safe asynchronous
    event-driven programming. In: <i>Proceedings of the 34th ACM SIGPLAN Conference
    on Programming Language Design and Implementation</i>. ACM; 2013:321-331. doi:<a
    href="https://doi.org/10.1145/2491956.2462184">10.1145/2491956.2462184</a>'
  apa: 'Desai, A., Gupta, V., Jackson, E., Qadeer, S., Rajamani, S., &#38; Zufferey,
    D. (2013). P: Safe asynchronous event-driven programming. In <i>Proceedings of
    the 34th ACM SIGPLAN Conference on Programming Language Design and Implementation</i>
    (pp. 321–331). Seattle, WA, United States: ACM. <a href="https://doi.org/10.1145/2491956.2462184">https://doi.org/10.1145/2491956.2462184</a>'
  chicago: 'Desai, Ankush, Vivek Gupta, Ethan Jackson, Shaz Qadeer, Sriram Rajamani,
    and Damien Zufferey. “P: Safe Asynchronous Event-Driven Programming.” In <i>Proceedings
    of the 34th ACM SIGPLAN Conference on Programming Language Design and Implementation</i>,
    321–31. ACM, 2013. <a href="https://doi.org/10.1145/2491956.2462184">https://doi.org/10.1145/2491956.2462184</a>.'
  ieee: 'A. Desai, V. Gupta, E. Jackson, S. Qadeer, S. Rajamani, and D. Zufferey,
    “P: Safe asynchronous event-driven programming,” in <i>Proceedings of the 34th
    ACM SIGPLAN Conference on Programming Language Design and Implementation</i>,
    Seattle, WA, United States, 2013, pp. 321–331.'
  ista: 'Desai A, Gupta V, Jackson E, Qadeer S, Rajamani S, Zufferey D. 2013. P: Safe
    asynchronous event-driven programming. Proceedings of the 34th ACM SIGPLAN Conference
    on Programming Language Design and Implementation. PLDI: Programming Languages
    Design and Implementation, 321–331.'
  mla: 'Desai, Ankush, et al. “P: Safe Asynchronous Event-Driven Programming.” <i>Proceedings
    of the 34th ACM SIGPLAN Conference on Programming Language Design and Implementation</i>,
    ACM, 2013, pp. 321–31, doi:<a href="https://doi.org/10.1145/2491956.2462184">10.1145/2491956.2462184</a>.'
  short: A. Desai, V. Gupta, E. Jackson, S. Qadeer, S. Rajamani, D. Zufferey, in:,
    Proceedings of the 34th ACM SIGPLAN Conference on Programming Language Design
    and Implementation, ACM, 2013, pp. 321–331.
conference:
  end_date: 2013-06-19
  location: Seattle, WA, United States
  name: 'PLDI: Programming Languages Design and Implementation'
  start_date: 2013-06-16
date_created: 2018-12-11T11:56:52Z
date_published: 2013-06-01T00:00:00Z
date_updated: 2021-01-12T06:56:38Z
day: '01'
department:
- _id: ToHe
doi: 10.1145/2491956.2462184
ec_funded: 1
language:
- iso: eng
main_file_link:
- url: http://research.microsoft.com/pubs/191069/pldi212_desai.pdf
month: '06'
oa_version: None
page: 321 - 331
project:
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
- _id: 25EE3708-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '267989'
  name: Quantitative Reactive Modeling
publication: Proceedings of the 34th ACM SIGPLAN Conference on Programming Language
  Design and Implementation
publication_status: published
publisher: ACM
publist_id: '4626'
quality_controlled: '1'
scopus_import: 1
status: public
title: 'P: Safe asynchronous event-driven programming'
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2013'
...
---
_id: '2303'
abstract:
- lang: eng
  text: MADM (Mosaic Analysis with Double Markers) technology offers a genetic approach
    in mice to visualize and concomitantly manipulate genetically defined cells at
    clonal level and single cell resolution. MADM employs Cre recombinase/loxP-dependent
    interchromosomal mitotic recombination to reconstitute two split marker genes—green
    GFP and red tdTomato—and can label sparse clones of homozygous mutant cells in
    one color and wild-type cells in the other color in an otherwise unlabeled background.
    At present, major MADM applications include lineage tracing, single cell labeling,
    conditional knockouts in small populations of cells and induction of uniparental
    chromosome disomy to assess effects of genomic imprinting. MADM can be applied
    universally in the mouse with the sole limitation being the specificity of the
    promoter controlling Cre recombinase expression. Here I review recent developments
    and extensions of the MADM technique and give an overview of the major discoveries
    and progresses enabled by the implementation of the novel genetic MADM tools.
acknowledgement: This work was supported by IST Austria institutional funds.
article_type: review
author:
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
citation:
  ama: Hippenmeyer S. Dissection of gene function at clonal level using mosaic analysis
    with double markers. <i>Frontiers in Biology</i>. 2013;8(6):557-568. doi:<a href="https://doi.org/10.1007/s11515-013-1279-6">10.1007/s11515-013-1279-6</a>
  apa: Hippenmeyer, S. (2013). Dissection of gene function at clonal level using mosaic
    analysis with double markers. <i>Frontiers in Biology</i>. Springer. <a href="https://doi.org/10.1007/s11515-013-1279-6">https://doi.org/10.1007/s11515-013-1279-6</a>
  chicago: Hippenmeyer, Simon. “Dissection of Gene Function at Clonal Level Using
    Mosaic Analysis with Double Markers.” <i>Frontiers in Biology</i>. Springer, 2013.
    <a href="https://doi.org/10.1007/s11515-013-1279-6">https://doi.org/10.1007/s11515-013-1279-6</a>.
  ieee: S. Hippenmeyer, “Dissection of gene function at clonal level using mosaic
    analysis with double markers,” <i>Frontiers in Biology</i>, vol. 8, no. 6. Springer,
    pp. 557–568, 2013.
  ista: Hippenmeyer S. 2013. Dissection of gene function at clonal level using mosaic
    analysis with double markers. Frontiers in Biology. 8(6), 557–568.
  mla: Hippenmeyer, Simon. “Dissection of Gene Function at Clonal Level Using Mosaic
    Analysis with Double Markers.” <i>Frontiers in Biology</i>, vol. 8, no. 6, Springer,
    2013, pp. 557–68, doi:<a href="https://doi.org/10.1007/s11515-013-1279-6">10.1007/s11515-013-1279-6</a>.
  short: S. Hippenmeyer, Frontiers in Biology 8 (2013) 557–568.
corr_author: '1'
date_created: 2018-12-11T11:56:52Z
date_published: 2013-09-03T00:00:00Z
date_updated: 2024-10-09T20:55:16Z
day: '03'
department:
- _id: SiHi
doi: 10.1007/s11515-013-1279-6
intvolume: '         8'
issue: '6'
language:
- iso: eng
month: '09'
oa_version: None
page: 557 - 568
publication: Frontiers in Biology
publication_status: published
publisher: Springer
publist_id: '4624'
quality_controlled: '1'
scopus_import: 1
status: public
title: Dissection of gene function at clonal level using mosaic analysis with double
  markers
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2013'
...
---
_id: '2304'
abstract:
- lang: eng
  text: This extended abstract is concerned with the irregularities of distribution
    of one-dimensional permuted van der Corput sequences that are generated from linear
    permutations. We show how to obtain upper bounds for the discrepancy and diaphony
    of these sequences, by relating them to Kronecker sequences and applying earlier
    results of Faure and Niederreiter.
acknowledgement: This research is supported by the Graduate school of IST Austria
  (Institute of Science and Technology Austria).
author:
- first_name: Florian
  full_name: Pausinger, Florian
  id: 2A77D7A2-F248-11E8-B48F-1D18A9856A87
  last_name: Pausinger
  orcid: 0000-0002-8379-3768
citation:
  ama: Pausinger F. Van der Corput sequences and linear permutations. <i>Electronic
    Notes in Discrete Mathematics</i>. 2013;43:43-50. doi:<a href="https://doi.org/10.1016/j.endm.2013.07.008">10.1016/j.endm.2013.07.008</a>
  apa: Pausinger, F. (2013). Van der Corput sequences and linear permutations. <i>Electronic
    Notes in Discrete Mathematics</i>. Elsevier. <a href="https://doi.org/10.1016/j.endm.2013.07.008">https://doi.org/10.1016/j.endm.2013.07.008</a>
  chicago: Pausinger, Florian. “Van Der Corput Sequences and Linear Permutations.”
    <i>Electronic Notes in Discrete Mathematics</i>. Elsevier, 2013. <a href="https://doi.org/10.1016/j.endm.2013.07.008">https://doi.org/10.1016/j.endm.2013.07.008</a>.
  ieee: F. Pausinger, “Van der Corput sequences and linear permutations,” <i>Electronic
    Notes in Discrete Mathematics</i>, vol. 43. Elsevier, pp. 43–50, 2013.
  ista: Pausinger F. 2013. Van der Corput sequences and linear permutations. Electronic
    Notes in Discrete Mathematics. 43, 43–50.
  mla: Pausinger, Florian. “Van Der Corput Sequences and Linear Permutations.” <i>Electronic
    Notes in Discrete Mathematics</i>, vol. 43, Elsevier, 2013, pp. 43–50, doi:<a
    href="https://doi.org/10.1016/j.endm.2013.07.008">10.1016/j.endm.2013.07.008</a>.
  short: F. Pausinger, Electronic Notes in Discrete Mathematics 43 (2013) 43–50.
corr_author: '1'
date_created: 2018-12-11T11:56:53Z
date_published: 2013-09-05T00:00:00Z
date_updated: 2024-10-09T20:55:15Z
day: '05'
department:
- _id: HeEd
doi: 10.1016/j.endm.2013.07.008
intvolume: '        43'
language:
- iso: eng
month: '09'
oa_version: None
page: 43 - 50
publication: Electronic Notes in Discrete Mathematics
publication_status: published
publisher: Elsevier
publist_id: '4623'
quality_controlled: '1'
scopus_import: 1
status: public
title: Van der Corput sequences and linear permutations
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 43
year: '2013'
...
---
_id: '2305'
abstract:
- lang: eng
  text: We study the complexity of central controller synthesis problems for finite-state
    Markov decision processes, where the objective is to optimize both the expected
    mean-payoff performance of the system and its stability. e argue that the basic
    theoretical notion of expressing the stability in terms of the variance of the
    mean-payoff (called global variance in our paper) is not always sufficient, since
    it ignores possible instabilities on respective runs. For this reason we propose
    alernative definitions of stability, which we call local and hybrid variance,
    and which express how rewards on each run deviate from the run's own mean-payoff
    and from the expected mean-payoff, respectively. We show that a strategy ensuring
    both the expected mean-payoff and the variance below given bounds requires randomization
    and memory, under all the above semantics of variance. We then look at the problem
    of determining whether there is a such a strategy. For the global variance, we
    show that the problem is in PSPACE, and that the answer can be approximated in
    pseudo-polynomial time. For the hybrid variance, the analogous decision problem
    is in NP, and a polynomial-time approximating algorithm also exists. For local
    variance, we show that the decision problem is in NP. Since the overall performance
    can be traded for stability (and vice versa), we also present algorithms for approximating
    the associated Pareto curve in all the three cases. Finally, we study a special
    case of the decision problems, where we require a given expected mean-payoff together
    with zero variance. Here we show that the problems can be all solved in polynomial
    time.
article_processing_charge: No
arxiv: 1
author:
- first_name: Tomáš
  full_name: Brázdil, Tomáš
  last_name: Brázdil
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Vojtěch
  full_name: Forejt, Vojtěch
  last_name: Forejt
- first_name: Antonín
  full_name: Kučera, Antonín
  last_name: Kučera
citation:
  ama: 'Brázdil T, Chatterjee K, Forejt V, Kučera A. Trading performance for stability
    in Markov decision processes. In: <i>28th Annual ACM/IEEE Symposium</i>. IEEE;
    2013:331-340. doi:<a href="https://doi.org/10.1109/LICS.2013.39">10.1109/LICS.2013.39</a>'
  apa: 'Brázdil, T., Chatterjee, K., Forejt, V., &#38; Kučera, A. (2013). Trading
    performance for stability in Markov decision processes. In <i>28th Annual ACM/IEEE
    Symposium</i> (pp. 331–340). New Orleans, LA, United States: IEEE. <a href="https://doi.org/10.1109/LICS.2013.39">https://doi.org/10.1109/LICS.2013.39</a>'
  chicago: Brázdil, Tomáš, Krishnendu Chatterjee, Vojtěch Forejt, and Antonín Kučera.
    “Trading Performance for Stability in Markov Decision Processes.” In <i>28th Annual
    ACM/IEEE Symposium</i>, 331–40. IEEE, 2013. <a href="https://doi.org/10.1109/LICS.2013.39">https://doi.org/10.1109/LICS.2013.39</a>.
  ieee: T. Brázdil, K. Chatterjee, V. Forejt, and A. Kučera, “Trading performance
    for stability in Markov decision processes,” in <i>28th Annual ACM/IEEE Symposium</i>,
    New Orleans, LA, United States, 2013, pp. 331–340.
  ista: 'Brázdil T, Chatterjee K, Forejt V, Kučera A. 2013. Trading performance for
    stability in Markov decision processes. 28th Annual ACM/IEEE Symposium. LICS:
    Logic in Computer Science, 331–340.'
  mla: Brázdil, Tomáš, et al. “Trading Performance for Stability in Markov Decision
    Processes.” <i>28th Annual ACM/IEEE Symposium</i>, IEEE, 2013, pp. 331–40, doi:<a
    href="https://doi.org/10.1109/LICS.2013.39">10.1109/LICS.2013.39</a>.
  short: T. Brázdil, K. Chatterjee, V. Forejt, A. Kučera, in:, 28th Annual ACM/IEEE
    Symposium, IEEE, 2013, pp. 331–340.
conference:
  end_date: 2013-06-28
  location: New Orleans, LA, United States
  name: 'LICS: Logic in Computer Science'
  start_date: 2013-06-25
date_created: 2018-12-11T11:56:53Z
date_published: 2013-08-01T00:00:00Z
date_updated: 2025-09-29T14:16:57Z
day: '01'
department:
- _id: KrCh
doi: 10.1109/LICS.2013.39
ec_funded: 1
external_id:
  arxiv:
  - '1305.4103'
  isi:
  - '000326815000038'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1305.4103
month: '08'
oa: 1
oa_version: Preprint
page: 331 - 340
project:
- _id: 2584A770-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P 23499-N23
  name: Modern Graph Algorithmic Techniques in Formal Verification
- _id: 25863FF4-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11407
  name: Game Theory
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
- _id: 2587B514-B435-11E9-9278-68D0E5697425
  name: Microsoft Research Faculty Fellowship
publication: 28th Annual ACM/IEEE Symposium
publication_status: published
publisher: IEEE
publist_id: '4622'
quality_controlled: '1'
related_material:
  record:
  - id: '1294'
    relation: later_version
    status: public
scopus_import: '1'
status: public
title: Trading performance for stability in Markov decision processes
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
year: '2013'
...
---
_id: '2306'
abstract:
- lang: ger
  text: Das Buch ist sowohl eine Einführung in die Themen Linked Data, Open Data und
    Open Linked Data als es auch den konkreten Bezug auf Bibliotheken behandelt. Hierzu
    werden konkrete Anwendungsprojekte beschrieben. Der Band wendet sich dabei sowohl
    an Personen aus der Bibliothekspraxis als auch an Personen aus dem Bibliotheksmanagement,
    die noch nicht mit dem Thema vertraut sind.
alternative_title:
- Bibliotheks- und Informationspraxis
article_processing_charge: No
author:
- first_name: Patrick
  full_name: Danowski, Patrick
  id: 2EBD1598-F248-11E8-B48F-1D18A9856A87
  last_name: Danowski
  orcid: 0000-0002-6026-4409
- first_name: Adrian
  full_name: Pohl, Adrian
  last_name: Pohl
citation:
  ama: Danowski P, Pohl A. <i>(Open) Linked Data in Bibliotheken</i>. Vol 50. De Gruyter;
    2013. doi:<a href="https://doi.org/10.1515/9783110278736">10.1515/9783110278736</a>
  apa: Danowski, P., &#38; Pohl, A. (2013). <i>(Open) Linked Data in Bibliotheken</i>
    (Vol. 50). De Gruyter. <a href="https://doi.org/10.1515/9783110278736">https://doi.org/10.1515/9783110278736</a>
  chicago: Danowski, Patrick, and Adrian Pohl. <i>(Open) Linked Data in Bibliotheken</i>.
    Vol. 50. De Gruyter, 2013. <a href="https://doi.org/10.1515/9783110278736">https://doi.org/10.1515/9783110278736</a>.
  ieee: P. Danowski and A. Pohl, <i>(Open) Linked Data in Bibliotheken</i>, vol. 50.
    De Gruyter, 2013.
  ista: Danowski P, Pohl A. 2013. (Open) Linked Data in Bibliotheken, De Gruyter,p.
  mla: Danowski, Patrick, and Adrian Pohl. <i>(Open) Linked Data in Bibliotheken</i>.
    Vol. 50, De Gruyter, 2013, doi:<a href="https://doi.org/10.1515/9783110278736">10.1515/9783110278736</a>.
  short: P. Danowski, A. Pohl, (Open) Linked Data in Bibliotheken, De Gruyter, 2013.
date_created: 2018-12-11T11:56:53Z
date_published: 2013-09-13T00:00:00Z
date_updated: 2021-12-21T12:17:19Z
day: '13'
ddc:
- '020'
department:
- _id: E-Lib
doi: 10.1515/9783110278736
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has_accepted_license: '1'
intvolume: '        50'
language:
- iso: ger
license: https://creativecommons.org/licenses/by/4.0/
month: '09'
oa: 1
oa_version: Published Version
publication_identifier:
  eisbn:
  - 9-783-1102-7873-6
  isbn:
  - ' 978-3-11-027634-3'
  issn:
  - 2191-3587
publication_status: published
publisher: De Gruyter
publist_id: '4621'
pubrep_id: '725'
quality_controlled: '1'
status: public
title: (Open) Linked Data in Bibliotheken
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: book
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 50
year: '2013'
...
---
_id: '2315'
abstract:
- lang: eng
  text: '     We study the effects of random scatterers on the ground state of the
    one-dimensional Lieb-Liniger model of interacting bosons on the unit interval
    in the Gross-Pitaevskii regime. We prove that Bose Einstein condensation survives
    even a strong random potential with a high density of scatterers. The character
    of the wave function of the condensate, however, depends in an essential way on
    the interplay between randomness and the strength of the two-body interaction.
    For low density of scatterers or strong interactions the wave function extends
    over the whole interval. High density of scatterers and weak interaction, on the
    other hand, leads to localization of the wave function in a fragmented subset
    of the interval. '
article_processing_charge: No
arxiv: 1
author:
- first_name: Robert
  full_name: Seiringer, Robert
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
- first_name: Jakob
  full_name: Yngvason, Jakob
  last_name: Yngvason
- first_name: Valentin
  full_name: Zagrebnov, Valentin
  last_name: Zagrebnov
citation:
  ama: 'Seiringer R, Yngvason J, Zagrebnov V. Disordered Bose-Einstein condensates
    with interaction. In: World Scientific Publishing; 2013:610-619. doi:<a href="https://doi.org/10.1142/9789814449243_0063">10.1142/9789814449243_0063</a>'
  apa: 'Seiringer, R., Yngvason, J., &#38; Zagrebnov, V. (2013). Disordered Bose-Einstein
    condensates with interaction (pp. 610–619). Presented at the ICMP: International
    Congress on Mathematical Physics, World Scientific Publishing. <a href="https://doi.org/10.1142/9789814449243_0063">https://doi.org/10.1142/9789814449243_0063</a>'
  chicago: Seiringer, Robert, Jakob Yngvason, and Valentin Zagrebnov. “Disordered
    Bose-Einstein Condensates with Interaction,” 610–19. World Scientific Publishing,
    2013. <a href="https://doi.org/10.1142/9789814449243_0063">https://doi.org/10.1142/9789814449243_0063</a>.
  ieee: 'R. Seiringer, J. Yngvason, and V. Zagrebnov, “Disordered Bose-Einstein condensates
    with interaction,” presented at the ICMP: International Congress on Mathematical
    Physics, 2013, pp. 610–619.'
  ista: 'Seiringer R, Yngvason J, Zagrebnov V. 2013. Disordered Bose-Einstein condensates
    with interaction. ICMP: International Congress on Mathematical Physics, 610–619.'
  mla: Seiringer, Robert, et al. <i>Disordered Bose-Einstein Condensates with Interaction</i>.
    World Scientific Publishing, 2013, pp. 610–19, doi:<a href="https://doi.org/10.1142/9789814449243_0063">10.1142/9789814449243_0063</a>.
  short: R. Seiringer, J. Yngvason, V. Zagrebnov, in:, World Scientific Publishing,
    2013, pp. 610–619.
conference:
  name: 'ICMP: International Congress on Mathematical Physics'
date_created: 2018-12-11T11:56:57Z
date_published: 2013-01-01T00:00:00Z
date_updated: 2021-01-12T06:56:43Z
doi: 10.1142/9789814449243_0063
extern: '1'
external_id:
  arxiv:
  - '1209.4046'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1209.4046
oa: 1
oa_version: None
page: 610-619
publication_status: published
publisher: World Scientific Publishing
publist_id: '4612'
status: public
title: Disordered Bose-Einstein condensates with interaction
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2013'
...
---
_id: '2319'
abstract:
- lang: eng
  text: In a recent paper [7] we give the first rigorous derivation of the celebrated
    Ginzburg-Landau (GL)theory, starting from the microscopic Bardeen- Cooper-Schrieffer
    (BCS)model. Here we present our results in the simplified case of a one-dimensional
    system of particles interacting via a δ-potential.
author:
- first_name: Rupert
  full_name: Frank, Rupert L
  last_name: Frank
- first_name: Christian
  full_name: Hainzl, Christian
  last_name: Hainzl
- first_name: Robert
  full_name: Robert Seiringer
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
- first_name: Jan
  full_name: Solovej, Jan P
  last_name: Solovej
citation:
  ama: 'Frank R, Hainzl C, Seiringer R, Solovej J.  Derivation of Ginzburg-Landau
    theory for a one-dimensional system with contact interaction. In: Springer; 2013:57-88.
    doi:<a href="https://doi.org/10.1007/978-3-0348-0531-5_3">10.1007/978-3-0348-0531-5_3</a>'
  apa: 'Frank, R., Hainzl, C., Seiringer, R., &#38; Solovej, J. (2013).  Derivation
    of Ginzburg-Landau theory for a one-dimensional system with contact interaction
    (pp. 57–88). Presented at the OTAMP: Operator Theory, Analysis and Mathematical
    Physics, Springer. <a href="https://doi.org/10.1007/978-3-0348-0531-5_3">https://doi.org/10.1007/978-3-0348-0531-5_3</a>'
  chicago: Frank, Rupert, Christian Hainzl, Robert Seiringer, and Jan Solovej. “ Derivation
    of Ginzburg-Landau Theory for a One-Dimensional System with Contact Interaction,”
    57–88. Springer, 2013. <a href="https://doi.org/10.1007/978-3-0348-0531-5_3">https://doi.org/10.1007/978-3-0348-0531-5_3</a>.
  ieee: 'R. Frank, C. Hainzl, R. Seiringer, and J. Solovej, “ Derivation of Ginzburg-Landau
    theory for a one-dimensional system with contact interaction,” presented at the
    OTAMP: Operator Theory, Analysis and Mathematical Physics, 2013, pp. 57–88.'
  ista: 'Frank R, Hainzl C, Seiringer R, Solovej J. 2013.  Derivation of Ginzburg-Landau
    theory for a one-dimensional system with contact interaction. OTAMP: Operator
    Theory, Analysis and Mathematical Physics, 57–88.'
  mla: Frank, Rupert, et al. <i> Derivation of Ginzburg-Landau Theory for a One-Dimensional
    System with Contact Interaction</i>. Springer, 2013, pp. 57–88, doi:<a href="https://doi.org/10.1007/978-3-0348-0531-5_3">10.1007/978-3-0348-0531-5_3</a>.
  short: R. Frank, C. Hainzl, R. Seiringer, J. Solovej, in:, Springer, 2013, pp. 57–88.
conference:
  name: 'OTAMP: Operator Theory, Analysis and Mathematical Physics'
date_created: 2018-12-11T11:56:58Z
date_published: 2013-01-01T00:00:00Z
date_updated: 2021-01-12T06:56:45Z
day: '01'
doi: 10.1007/978-3-0348-0531-5_3
extern: 1
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1103.1866
month: '01'
oa: 1
page: 57 - 88
publication_status: published
publisher: Springer
publist_id: '4608'
quality_controlled: 0
status: public
title: ' Derivation of Ginzburg-Landau theory for a one-dimensional system with contact
  interaction'
type: conference
year: '2013'
...
---
_id: '2327'
abstract:
- lang: eng
  text: 'We define the model-measuring problem: given a model M and specification
    φ, what is the maximal distance ρ such that all models M′ within distance ρ from
    M satisfy (or violate) φ. The model measuring problem presupposes a distance function
    on models. We concentrate on automatic distance functions, which are defined by
    weighted automata. The model-measuring problem subsumes several generalizations
    of the classical model-checking problem, in particular, quantitative model-checking
    problems that measure the degree of satisfaction of a specification, and robustness
    problems that measure how much a model can be perturbed without violating the
    specification. We show that for automatic distance functions, and ω-regular linear-time
    and branching-time specifications, the model-measuring problem can be solved.
    We use automata-theoretic model-checking methods for model measuring, replacing
    the emptiness question for standard word and tree automata by the optimal-weight
    question for the weighted versions of these automata. We consider weighted automata
    that accumulate weights by maximizing, summing, discounting, and limit averaging.
    We give several examples of using the model-measuring problem to compute various
    notions of robustness and quantitative satisfaction for temporal specifications.'
alternative_title:
- LNCS
author:
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Jan
  full_name: Otop, Jan
  id: 2FC5DA74-F248-11E8-B48F-1D18A9856A87
  last_name: Otop
citation:
  ama: Henzinger TA, Otop J. From model checking to model measuring. 2013;8052:273-287.
    doi:<a href="https://doi.org/10.1007/978-3-642-40184-8_20">10.1007/978-3-642-40184-8_20</a>
  apa: 'Henzinger, T. A., &#38; Otop, J. (2013). From model checking to model measuring.
    Presented at the CONCUR: Concurrency Theory, Buenos Aires, Argentina: Springer.
    <a href="https://doi.org/10.1007/978-3-642-40184-8_20">https://doi.org/10.1007/978-3-642-40184-8_20</a>'
  chicago: Henzinger, Thomas A, and Jan Otop. “From Model Checking to Model Measuring.”
    Lecture Notes in Computer Science. Springer, 2013. <a href="https://doi.org/10.1007/978-3-642-40184-8_20">https://doi.org/10.1007/978-3-642-40184-8_20</a>.
  ieee: T. A. Henzinger and J. Otop, “From model checking to model measuring,” vol.
    8052. Springer, pp. 273–287, 2013.
  ista: Henzinger TA, Otop J. 2013. From model checking to model measuring. 8052,
    273–287.
  mla: Henzinger, Thomas A., and Jan Otop. <i>From Model Checking to Model Measuring</i>.
    Vol. 8052, Springer, 2013, pp. 273–87, doi:<a href="https://doi.org/10.1007/978-3-642-40184-8_20">10.1007/978-3-642-40184-8_20</a>.
  short: T.A. Henzinger, J. Otop, 8052 (2013) 273–287.
conference:
  end_date: 2013-08-30
  location: Buenos Aires, Argentina
  name: 'CONCUR: Concurrency Theory'
  start_date: 2013-08-27
corr_author: '1'
date_created: 2018-12-11T11:57:00Z
date_published: 2013-08-01T00:00:00Z
date_updated: 2024-10-21T06:02:58Z
day: '01'
ddc:
- '005'
- '000'
department:
- _id: ToHe
doi: 10.1007/978-3-642-40184-8_20
file:
- access_level: open_access
  checksum: 4c04695c4bfdf2119cd4f5d1babc3e8a
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:17:45Z
  date_updated: 2020-07-14T12:45:38Z
  file_id: '5301'
  file_name: IST-2013-129-v1+1_concur.pdf
  file_size: 378587
  relation: main_file
file_date_updated: 2020-07-14T12:45:38Z
has_accepted_license: '1'
intvolume: '      8052'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Submitted Version
page: 273 - 287
publication_status: published
publisher: Springer
publist_id: '4599'
pubrep_id: '129'
quality_controlled: '1'
related_material:
  record:
  - id: '5417'
    relation: earlier_version
    status: public
scopus_import: '1'
series_title: Lecture Notes in Computer Science
status: public
title: From model checking to model measuring
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8052
year: '2013'
...
---
_id: '2328'
abstract:
- lang: eng
  text: "Linearizability of concurrent data structures is usually proved by monolithic
    simulation arguments relying on identifying the so-called linearization points.
    Regrettably, such proofs, whether manual or automatic, are often complicated and
    scale poorly to advanced non-blocking concurrency patterns, such as helping and
    optimistic updates.\r\nIn response, we propose a more modular way of checking
    linearizability of concurrent queue algorithms that does not involve identifying
    linearization points. We reduce the task of proving linearizability with respect
    to the queue specification to establishing four basic properties, each of which
    can be proved independently by simpler arguments. As a demonstration of our approach,
    we verify the Herlihy and Wing queue, an algorithm that is challenging to verify
    by a simulation proof."
alternative_title:
- LNCS
author:
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Ali
  full_name: Sezgin, Ali
  id: 4C7638DA-F248-11E8-B48F-1D18A9856A87
  last_name: Sezgin
- first_name: Viktor
  full_name: Vafeiadis, Viktor
  last_name: Vafeiadis
citation:
  ama: Henzinger TA, Sezgin A, Vafeiadis V. Aspect-oriented linearizability proofs.
    2013;8052:242-256. doi:<a href="https://doi.org/10.1007/978-3-642-40184-8_18">10.1007/978-3-642-40184-8_18</a>
  apa: 'Henzinger, T. A., Sezgin, A., &#38; Vafeiadis, V. (2013). Aspect-oriented
    linearizability proofs. Presented at the CONCUR: Concurrency Theory, Buenos Aires,
    Argentina: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href="https://doi.org/10.1007/978-3-642-40184-8_18">https://doi.org/10.1007/978-3-642-40184-8_18</a>'
  chicago: Henzinger, Thomas A, Ali Sezgin, and Viktor Vafeiadis. “Aspect-Oriented
    Linearizability Proofs.” Lecture Notes in Computer Science. Schloss Dagstuhl -
    Leibniz-Zentrum für Informatik, 2013. <a href="https://doi.org/10.1007/978-3-642-40184-8_18">https://doi.org/10.1007/978-3-642-40184-8_18</a>.
  ieee: T. A. Henzinger, A. Sezgin, and V. Vafeiadis, “Aspect-oriented linearizability
    proofs,” vol. 8052. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, pp. 242–256,
    2013.
  ista: Henzinger TA, Sezgin A, Vafeiadis V. 2013. Aspect-oriented linearizability
    proofs. 8052, 242–256.
  mla: Henzinger, Thomas A., et al. <i>Aspect-Oriented Linearizability Proofs</i>.
    Vol. 8052, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2013, pp. 242–56,
    doi:<a href="https://doi.org/10.1007/978-3-642-40184-8_18">10.1007/978-3-642-40184-8_18</a>.
  short: T.A. Henzinger, A. Sezgin, V. Vafeiadis, 8052 (2013) 242–256.
conference:
  end_date: 2013-08-30
  location: Buenos Aires, Argentina
  name: 'CONCUR: Concurrency Theory'
  start_date: 2013-08-27
date_created: 2018-12-11T11:57:01Z
date_published: 2013-08-01T00:00:00Z
date_updated: 2025-09-23T07:56:19Z
day: '01'
ddc:
- '000'
- '004'
department:
- _id: ToHe
doi: 10.1007/978-3-642-40184-8_18
ec_funded: 1
file:
- access_level: open_access
  checksum: bdbb520de91751fe0136309ad4ef67e4
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:08:58Z
  date_updated: 2020-07-14T12:45:39Z
  file_id: '4721'
  file_name: IST-2014-197-v1+1_main-queue-verification.pdf
  file_size: 337059
  relation: main_file
file_date_updated: 2020-07-14T12:45:39Z
has_accepted_license: '1'
intvolume: '      8052'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Submitted Version
page: 242 - 256
project:
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
- _id: 25EE3708-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '267989'
  name: Quantitative Reactive Modeling
publication_status: published
publisher: Schloss Dagstuhl - Leibniz-Zentrum für Informatik
publist_id: '4598'
pubrep_id: '197'
quality_controlled: '1'
related_material:
  record:
  - id: '1832'
    relation: later_version
    status: public
scopus_import: 1
series_title: Lecture Notes in Computer Science
status: public
title: Aspect-oriented linearizability proofs
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8052
year: '2013'
...
---
_id: '2329'
abstract:
- lang: eng
  text: 'Two-player games on graphs are central in many problems in formal verification
    and program analysis such as synthesis and verification of open systems. In this
    work, we consider both finite-state game graphs, and recursive game graphs (or
    pushdown game graphs) that model the control flow of sequential programs with
    recursion. The objectives we study are multidimensional mean-payoff objectives,
    where the goal of player 1 is to ensure that the mean-payoff is non-negative in
    all dimensions. In pushdown games two types of strategies are relevant: (1) global
    strategies, that depend on the entire global history; and (2) modular strategies,
    that have only local memory and thus do not depend on the context of invocation.
    Our main contributions are as follows: (1) We show that finite-state multidimensional
    mean-payoff games can be solved in polynomial time if the number of dimensions
    and the maximal absolute value of the weights are fixed; whereas if the number
    of dimensions is arbitrary, then the problem is known to be coNP-complete. (2)
    We show that pushdown graphs with multidimensional mean-payoff objectives can
    be solved in polynomial time. For both (1) and (2) our algorithms are based on
    hyperplane separation technique. (3) For pushdown games under global strategies
    both one and multidimensional mean-payoff objectives problems are known to be
    undecidable, and we show that under modular strategies the multidimensional problem
    is also undecidable; under modular strategies the one-dimensional problem is NP-complete.
    We show that if the number of modules, the number of exits, and the maximal absolute
    value of the weights are fixed, then pushdown games under modular strategies with
    one-dimensional mean-payoff objectives can be solved in polynomial time, and if
    either the number of exits or the number of modules is unbounded, then the problem
    is NP-hard. (4) Finally we show that a fixed parameter tractable algorithm for
    finite-state multidimensional mean-payoff games or pushdown games under modular
    strategies with one-dimensional mean-payoff objectives would imply the fixed parameter
    tractability of parity games.'
alternative_title:
- LNCS
arxiv: 1
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Yaron
  full_name: Velner, Yaron
  last_name: Velner
citation:
  ama: Chatterjee K, Velner Y. Hyperplane separation technique for multidimensional
    mean-payoff games. 2013;8052:500-515. doi:<a href="https://doi.org/10.1007/978-3-642-40184-8_35">10.1007/978-3-642-40184-8_35</a>
  apa: 'Chatterjee, K., &#38; Velner, Y. (2013). Hyperplane separation technique for
    multidimensional mean-payoff games. Presented at the CONCUR: Concurrency Theory,
    Buenos Aires, Argentinia: Springer. <a href="https://doi.org/10.1007/978-3-642-40184-8_35">https://doi.org/10.1007/978-3-642-40184-8_35</a>'
  chicago: Chatterjee, Krishnendu, and Yaron Velner. “Hyperplane Separation Technique
    for Multidimensional Mean-Payoff Games.” Lecture Notes in Computer Science. Springer,
    2013. <a href="https://doi.org/10.1007/978-3-642-40184-8_35">https://doi.org/10.1007/978-3-642-40184-8_35</a>.
  ieee: K. Chatterjee and Y. Velner, “Hyperplane separation technique for multidimensional
    mean-payoff games,” vol. 8052. Springer, pp. 500–515, 2013.
  ista: Chatterjee K, Velner Y. 2013. Hyperplane separation technique for multidimensional
    mean-payoff games. 8052, 500–515.
  mla: Chatterjee, Krishnendu, and Yaron Velner. <i>Hyperplane Separation Technique
    for Multidimensional Mean-Payoff Games</i>. Vol. 8052, Springer, 2013, pp. 500–15,
    doi:<a href="https://doi.org/10.1007/978-3-642-40184-8_35">10.1007/978-3-642-40184-8_35</a>.
  short: K. Chatterjee, Y. Velner, 8052 (2013) 500–515.
conference:
  end_date: 2013-08-30
  location: Buenos Aires, Argentinia
  name: 'CONCUR: Concurrency Theory'
  start_date: 2013-08-27
date_created: 2018-12-11T11:57:01Z
date_published: 2013-08-01T00:00:00Z
date_updated: 2025-09-10T11:00:30Z
day: '01'
department:
- _id: KrCh
doi: 10.1007/978-3-642-40184-8_35
ec_funded: 1
external_id:
  arxiv:
  - '1210.3141'
intvolume: '      8052'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1210.3141
month: '08'
oa: 1
oa_version: Preprint
page: 500 - 515
project:
- _id: 2584A770-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P 23499-N23
  name: Modern Graph Algorithmic Techniques in Formal Verification
- _id: 25863FF4-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11407
  name: Game Theory
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
- _id: 2587B514-B435-11E9-9278-68D0E5697425
  name: Microsoft Research Faculty Fellowship
publication_status: published
publisher: Springer
publist_id: '4597'
quality_controlled: '1'
related_material:
  record:
  - id: '717'
    relation: later_version
    status: public
scopus_import: 1
series_title: Lecture Notes in Computer Science
status: public
title: Hyperplane separation technique for multidimensional mean-payoff games
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8052
year: '2013'
...
---
_id: '2404'
abstract:
- lang: eng
  text: The Lieb-Thirring inequalities give a bound on the negative eigenvalues of
    a Schrödinger operator in terms of an Lp-norm of the potential. These are dual
    to bounds on the H1-norms of a system of orthonormal functions. Here we extend
    these bounds to analogous inequalities for perturbations of the Fermi sea of noninteracting
    particles (i.e., for perturbations of the continuous spectrum of the Laplacian
    by local potentials).
author:
- first_name: Rupert
  full_name: Frank, Rupert L
  last_name: Frank
- first_name: Mathieu
  full_name: Lewin, Mathieu
  last_name: Lewin
- first_name: Élliott
  full_name: Lieb, Élliott H
  last_name: Lieb
- first_name: Robert
  full_name: Robert Seiringer
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
citation:
  ama: Frank R, Lewin M, Lieb É, Seiringer R. A positive density analogue of the Lieb-Thirring
    inequality. <i>Duke Mathematical Journal</i>. 2013;162(3):435-495. doi:<a href="https://doi.org/10.1215/00127094-2019477">10.1215/00127094-2019477</a>
  apa: Frank, R., Lewin, M., Lieb, É., &#38; Seiringer, R. (2013). A positive density
    analogue of the Lieb-Thirring inequality. <i>Duke Mathematical Journal</i>. Duke
    University Press. <a href="https://doi.org/10.1215/00127094-2019477">https://doi.org/10.1215/00127094-2019477</a>
  chicago: Frank, Rupert, Mathieu Lewin, Élliott Lieb, and Robert Seiringer. “A Positive
    Density Analogue of the Lieb-Thirring Inequality.” <i>Duke Mathematical Journal</i>.
    Duke University Press, 2013. <a href="https://doi.org/10.1215/00127094-2019477">https://doi.org/10.1215/00127094-2019477</a>.
  ieee: R. Frank, M. Lewin, É. Lieb, and R. Seiringer, “A positive density analogue
    of the Lieb-Thirring inequality,” <i>Duke Mathematical Journal</i>, vol. 162,
    no. 3. Duke University Press, pp. 435–495, 2013.
  ista: Frank R, Lewin M, Lieb É, Seiringer R. 2013. A positive density analogue of
    the Lieb-Thirring inequality. Duke Mathematical Journal. 162(3), 435–495.
  mla: Frank, Rupert, et al. “A Positive Density Analogue of the Lieb-Thirring Inequality.”
    <i>Duke Mathematical Journal</i>, vol. 162, no. 3, Duke University Press, 2013,
    pp. 435–95, doi:<a href="https://doi.org/10.1215/00127094-2019477">10.1215/00127094-2019477</a>.
  short: R. Frank, M. Lewin, É. Lieb, R. Seiringer, Duke Mathematical Journal 162
    (2013) 435–495.
date_created: 2018-12-11T11:57:28Z
date_published: 2013-02-01T00:00:00Z
date_updated: 2021-01-12T06:57:17Z
day: '01'
doi: 10.1215/00127094-2019477
extern: 1
intvolume: '       162'
issue: '3'
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1108.4246
month: '02'
oa: 1
page: 435 - 495
publication: Duke Mathematical Journal
publication_status: published
publisher: Duke University Press
publist_id: '4521'
quality_controlled: 0
status: public
title: A positive density analogue of the Lieb-Thirring inequality
type: journal_article
volume: 162
year: '2013'
...
---
_id: '2405'
abstract:
- lang: eng
  text: We consider the bipolaron in the Pekar-Tomasevich approximation and address
    the question whether the ground state is spherically symmetric or not. Numerical
    analysis has, so far, not completely settled the question. Our contribution is
    to prove rigorously that the ground state remains spherical for small values of
    the electron-electron Coulomb repulsion.
author:
- first_name: Rupert
  full_name: Frank, Rupert L
  last_name: Frank
- first_name: Élliott
  full_name: Lieb, Élliott H
  last_name: Lieb
- first_name: Robert
  full_name: Robert Seiringer
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
citation:
  ama: Frank R, Lieb É, Seiringer R. Symmetry of bipolaron bound states for small
    Coulomb repulsion. <i>Communications in Mathematical Physics</i>. 2013;319(2):557-573.
    doi:<a href="https://doi.org/10.1007/s00220-012-1604-y">10.1007/s00220-012-1604-y</a>
  apa: Frank, R., Lieb, É., &#38; Seiringer, R. (2013). Symmetry of bipolaron bound
    states for small Coulomb repulsion. <i>Communications in Mathematical Physics</i>.
    Springer. <a href="https://doi.org/10.1007/s00220-012-1604-y">https://doi.org/10.1007/s00220-012-1604-y</a>
  chicago: Frank, Rupert, Élliott Lieb, and Robert Seiringer. “Symmetry of Bipolaron
    Bound States for Small Coulomb Repulsion.” <i>Communications in Mathematical Physics</i>.
    Springer, 2013. <a href="https://doi.org/10.1007/s00220-012-1604-y">https://doi.org/10.1007/s00220-012-1604-y</a>.
  ieee: R. Frank, É. Lieb, and R. Seiringer, “Symmetry of bipolaron bound states for
    small Coulomb repulsion,” <i>Communications in Mathematical Physics</i>, vol.
    319, no. 2. Springer, pp. 557–573, 2013.
  ista: Frank R, Lieb É, Seiringer R. 2013. Symmetry of bipolaron bound states for
    small Coulomb repulsion. Communications in Mathematical Physics. 319(2), 557–573.
  mla: Frank, Rupert, et al. “Symmetry of Bipolaron Bound States for Small Coulomb
    Repulsion.” <i>Communications in Mathematical Physics</i>, vol. 319, no. 2, Springer,
    2013, pp. 557–73, doi:<a href="https://doi.org/10.1007/s00220-012-1604-y">10.1007/s00220-012-1604-y</a>.
  short: R. Frank, É. Lieb, R. Seiringer, Communications in Mathematical Physics 319
    (2013) 557–573.
date_created: 2018-12-11T11:57:28Z
date_published: 2013-04-01T00:00:00Z
date_updated: 2021-01-12T06:57:17Z
day: '01'
doi: 10.1007/s00220-012-1604-y
extern: 1
intvolume: '       319'
issue: '2'
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1201.3954
month: '04'
oa: 1
page: 557 - 573
publication: Communications in Mathematical Physics
publication_status: published
publisher: Springer
publist_id: '4522'
quality_controlled: 0
status: public
title: Symmetry of bipolaron bound states for small Coulomb repulsion
type: journal_article
volume: 319
year: '2013'
...
---
_id: '2406'
abstract:
- lang: eng
  text: We study the effects of random scatterers on the ground state of the one-dimensional
    Lieb-Liniger model of interacting bosons on the unit interval. We prove that,
    in the Gross-Pitaevskii limit, Bose Einstein condensation takes place in the whole
    parameter range considered. The character of the wave function of the condensate,
    however, depends in an essential way on the interplay between randomness and the
    strength of the two-body interaction. For low density of scatterers or strong
    interactions the wave function extends over the whole interval. High density of
    scatterers and weak interaction, on the other hand, leads to localization of the
    wave function in a fragmented subset of the unit interval.
author:
- first_name: Robert
  full_name: Robert Seiringer
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
- first_name: Jakob
  full_name: Yngvason, Jakob
  last_name: Yngvason
- first_name: Valentin
  full_name: Zagrebnov, Valentin A
  last_name: Zagrebnov
citation:
  ama: 'Seiringer R, Yngvason J, Zagrebnov V. Condensation of interacting bosons in
    a random potential. <i>European Physical Journal: Special Topics</i>. 2013;217(1):103-107.
    doi:<a href="https://doi.org/10.1140/epjst/e2013-01759-5">10.1140/epjst/e2013-01759-5</a>'
  apa: 'Seiringer, R., Yngvason, J., &#38; Zagrebnov, V. (2013). Condensation of interacting
    bosons in a random potential. <i>European Physical Journal: Special Topics</i>.
    Springer. <a href="https://doi.org/10.1140/epjst/e2013-01759-5">https://doi.org/10.1140/epjst/e2013-01759-5</a>'
  chicago: 'Seiringer, Robert, Jakob Yngvason, and Valentin Zagrebnov. “Condensation
    of Interacting Bosons in a Random Potential.” <i>European Physical Journal: Special
    Topics</i>. Springer, 2013. <a href="https://doi.org/10.1140/epjst/e2013-01759-5">https://doi.org/10.1140/epjst/e2013-01759-5</a>.'
  ieee: 'R. Seiringer, J. Yngvason, and V. Zagrebnov, “Condensation of interacting
    bosons in a random potential,” <i>European Physical Journal: Special Topics</i>,
    vol. 217, no. 1. Springer, pp. 103–107, 2013.'
  ista: 'Seiringer R, Yngvason J, Zagrebnov V. 2013. Condensation of interacting bosons
    in a random potential. European Physical Journal: Special Topics. 217(1), 103–107.'
  mla: 'Seiringer, Robert, et al. “Condensation of Interacting Bosons in a Random
    Potential.” <i>European Physical Journal: Special Topics</i>, vol. 217, no. 1,
    Springer, 2013, pp. 103–07, doi:<a href="https://doi.org/10.1140/epjst/e2013-01759-5">10.1140/epjst/e2013-01759-5</a>.'
  short: 'R. Seiringer, J. Yngvason, V. Zagrebnov, European Physical Journal: Special
    Topics 217 (2013) 103–107.'
date_created: 2018-12-11T11:57:29Z
date_published: 2013-02-01T00:00:00Z
date_updated: 2021-01-12T06:57:17Z
day: '01'
doi: 10.1140/epjst/e2013-01759-5
extern: 1
intvolume: '       217'
issue: '1'
month: '02'
page: 103 - 107
publication: 'European Physical Journal: Special Topics'
publication_status: published
publisher: Springer
publist_id: '4520'
quality_controlled: 0
status: public
title: Condensation of interacting bosons in a random potential
type: journal_article
volume: 217
year: '2013'
...
---
_id: '2408'
abstract:
- lang: eng
  text: We investigate the low-energy excitation spectrum of a Bose gas confined in
    a trap, with weak long-range repulsive interactions. In particular, we prove that
    the spectrum can be described in terms of the eigenvalues of an effective one-particle
    operator, as predicted by the Bogoliubov approximation.
author:
- first_name: Philip
  full_name: Grech, Philip
  last_name: Grech
- first_name: Robert
  full_name: Robert Seiringer
  id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
  last_name: Seiringer
  orcid: 0000-0002-6781-0521
citation:
  ama: Grech P, Seiringer R. The excitation spectrum for weakly interacting Bosons
    in a trap. <i>Communications in Mathematical Physics</i>. 2013;322(2):559-591.
    doi:<a href="https://doi.org/10.1007/s00220-013-1736-8">10.1007/s00220-013-1736-8</a>
  apa: Grech, P., &#38; Seiringer, R. (2013). The excitation spectrum for weakly interacting
    Bosons in a trap. <i>Communications in Mathematical Physics</i>. Springer. <a
    href="https://doi.org/10.1007/s00220-013-1736-8">https://doi.org/10.1007/s00220-013-1736-8</a>
  chicago: Grech, Philip, and Robert Seiringer. “The Excitation Spectrum for Weakly
    Interacting Bosons in a Trap.” <i>Communications in Mathematical Physics</i>.
    Springer, 2013. <a href="https://doi.org/10.1007/s00220-013-1736-8">https://doi.org/10.1007/s00220-013-1736-8</a>.
  ieee: P. Grech and R. Seiringer, “The excitation spectrum for weakly interacting
    Bosons in a trap,” <i>Communications in Mathematical Physics</i>, vol. 322, no.
    2. Springer, pp. 559–591, 2013.
  ista: Grech P, Seiringer R. 2013. The excitation spectrum for weakly interacting
    Bosons in a trap. Communications in Mathematical Physics. 322(2), 559–591.
  mla: Grech, Philip, and Robert Seiringer. “The Excitation Spectrum for Weakly Interacting
    Bosons in a Trap.” <i>Communications in Mathematical Physics</i>, vol. 322, no.
    2, Springer, 2013, pp. 559–91, doi:<a href="https://doi.org/10.1007/s00220-013-1736-8">10.1007/s00220-013-1736-8</a>.
  short: P. Grech, R. Seiringer, Communications in Mathematical Physics 322 (2013)
    559–591.
date_created: 2018-12-11T11:57:29Z
date_published: 2013-09-01T00:00:00Z
date_updated: 2021-01-12T06:57:18Z
day: '01'
doi: 10.1007/s00220-013-1736-8
extern: 1
intvolume: '       322'
issue: '2'
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1205.5259
month: '09'
oa: 1
page: 559 - 591
publication: Communications in Mathematical Physics
publication_status: published
publisher: Springer
publist_id: '4518'
quality_controlled: 0
status: public
title: The excitation spectrum for weakly interacting Bosons in a trap
type: journal_article
volume: 322
year: '2013'
...
---
_id: '2410'
abstract:
- lang: eng
  text: 'Here, we describe a novel virulent bacteriophage that infects Bacillus weihenstephanensis,
    isolated from soil in Austria. It is the first phage to be discovered that infects
    this species. Here, we present the complete genome sequence of this podovirus. '
author:
- first_name: Rodrigo A
  full_name: Fernandes Redondo, Rodrigo A
  id: 409D5C96-F248-11E8-B48F-1D18A9856A87
  last_name: Fernandes Redondo
  orcid: 0000-0002-5837-2793
- first_name: Anne
  full_name: Kupczok, Anne
  id: 2BB22BC2-F248-11E8-B48F-1D18A9856A87
  last_name: Kupczok
- first_name: Gertraud
  full_name: Stift, Gertraud
  id: 2DB195CA-F248-11E8-B48F-1D18A9856A87
  last_name: Stift
- first_name: Jonathan P
  full_name: Bollback, Jonathan P
  id: 2C6FA9CC-F248-11E8-B48F-1D18A9856A87
  last_name: Bollback
  orcid: 0000-0002-4624-4612
citation:
  ama: Fernandes Redondo RA, Kupczok A, Stift G, Bollback JP. Complete genome sequence
    of the novel phage MG-B1 infecting bacillus weihenstephanensis. <i>Genome Announcements</i>.
    2013;1(3). doi:<a href="https://doi.org/10.1128/genomeA.00216-13">10.1128/genomeA.00216-13</a>
  apa: Fernandes Redondo, R. A., Kupczok, A., Stift, G., &#38; Bollback, J. P. (2013).
    Complete genome sequence of the novel phage MG-B1 infecting bacillus weihenstephanensis.
    <i>Genome Announcements</i>. American Society for Microbiology. <a href="https://doi.org/10.1128/genomeA.00216-13">https://doi.org/10.1128/genomeA.00216-13</a>
  chicago: Fernandes Redondo, Rodrigo A, Anne Kupczok, Gertraud Stift, and Jonathan
    P Bollback. “Complete Genome Sequence of the Novel Phage MG-B1 Infecting Bacillus
    Weihenstephanensis.” <i>Genome Announcements</i>. American Society for Microbiology,
    2013. <a href="https://doi.org/10.1128/genomeA.00216-13">https://doi.org/10.1128/genomeA.00216-13</a>.
  ieee: R. A. Fernandes Redondo, A. Kupczok, G. Stift, and J. P. Bollback, “Complete
    genome sequence of the novel phage MG-B1 infecting bacillus weihenstephanensis,”
    <i>Genome Announcements</i>, vol. 1, no. 3. American Society for Microbiology,
    2013.
  ista: Fernandes Redondo RA, Kupczok A, Stift G, Bollback JP. 2013. Complete genome
    sequence of the novel phage MG-B1 infecting bacillus weihenstephanensis. Genome
    Announcements. 1(3).
  mla: Fernandes Redondo, Rodrigo A., et al. “Complete Genome Sequence of the Novel
    Phage MG-B1 Infecting Bacillus Weihenstephanensis.” <i>Genome Announcements</i>,
    vol. 1, no. 3, American Society for Microbiology, 2013, doi:<a href="https://doi.org/10.1128/genomeA.00216-13">10.1128/genomeA.00216-13</a>.
  short: R.A. Fernandes Redondo, A. Kupczok, G. Stift, J.P. Bollback, Genome Announcements
    1 (2013).
corr_author: '1'
date_created: 2018-12-11T11:57:30Z
date_published: 2013-06-13T00:00:00Z
date_updated: 2024-10-09T20:55:15Z
day: '13'
ddc:
- '576'
department:
- _id: JoBo
- _id: LifeSc
doi: 10.1128/genomeA.00216-13
file:
- access_level: open_access
  checksum: 0751ec74b695567e0cdf02aaf9c26829
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:17:36Z
  date_updated: 2020-07-14T12:45:40Z
  file_id: '5291'
  file_name: IST-2015-398-v1+1_Genome_Announc.-2013-Redondo-.pdf
  file_size: 130026
  relation: main_file
file_date_updated: 2020-07-14T12:45:40Z
has_accepted_license: '1'
intvolume: '         1'
issue: '3'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
publication: Genome Announcements
publication_status: published
publisher: American Society for Microbiology
publist_id: '4516'
pubrep_id: '398'
quality_controlled: '1'
scopus_import: 1
status: public
title: Complete genome sequence of the novel phage MG-B1 infecting bacillus weihenstephanensis
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 1
year: '2013'
...
---
_id: '2412'
abstract:
- lang: eng
  text: 'Background: The CRISPR/Cas system is known to act as an adaptive and heritable
    immune system in Eubacteria and Archaea. Immunity is encoded in an array of spacer
    sequences. Each spacer can provide specific immunity to invasive elements that
    carry the same or a similar sequence. Even in closely related strains, spacer
    content is very dynamic and evolves quickly. Standard models of nucleotide evolutioncannot
    be applied to quantify its rate of change since processes other than single nucleotide
    changes determine its evolution.Methods We present probabilistic models that are
    specific for spacer content evolution. They account for the different processes
    of insertion and deletion. Insertions can be constrained to occur on one end only
    or are allowed to occur throughout the array. One deletion event can affect one
    spacer or a whole fragment of adjacent spacers. Parameters of the underlying models
    are estimated for a pair of arrays by maximum likelihood using explicit ancestor
    enumeration.Results Simulations show that parameters are well estimated on average
    under the models presented here. There is a bias in the rate estimation when including
    fragment deletions. The models also estimate times between pairs of strains. But
    with increasing time, spacer overlap goes to zero, and thus there is an upper
    bound on the distance that can be estimated. Spacer content similarities are displayed
    in a distance based phylogeny using the estimated times.We use the presented models
    to analyze different Yersinia pestis data sets and find that the results among
    them are largely congruent. The models also capture the variation in diversity
    of spacers among the data sets. A comparison of spacer-based phylogenies and Cas
    gene phylogenies shows that they resolve very different time scales for this data
    set.Conclusions The simulations and data analyses show that the presented models
    are useful for quantifying spacer content evolution and for displaying spacer
    content similarities of closely related strains in a phylogeny. This allows for
    comparisons of different CRISPR arrays or for comparisons between CRISPR arrays
    and nucleotide substitution rates.'
article_processing_charge: No
author:
- first_name: Anne
  full_name: Kupczok, Anne
  id: 2BB22BC2-F248-11E8-B48F-1D18A9856A87
  last_name: Kupczok
- first_name: Jonathan P
  full_name: Bollback, Jonathan P
  id: 2C6FA9CC-F248-11E8-B48F-1D18A9856A87
  last_name: Bollback
  orcid: 0000-0002-4624-4612
citation:
  ama: Kupczok A, Bollback JP. Probabilistic models for CRISPR spacer content evolution
    . <i>BMC Evolutionary Biology</i>. 2013;13(1):54-54. doi:<a href="https://doi.org/10.1186/1471-2148-13-54">10.1186/1471-2148-13-54</a>
  apa: Kupczok, A., &#38; Bollback, J. P. (2013). Probabilistic models for CRISPR
    spacer content evolution . <i>BMC Evolutionary Biology</i>. BioMed Central. <a
    href="https://doi.org/10.1186/1471-2148-13-54">https://doi.org/10.1186/1471-2148-13-54</a>
  chicago: Kupczok, Anne, and Jonathan P Bollback. “Probabilistic Models for CRISPR
    Spacer Content Evolution .” <i>BMC Evolutionary Biology</i>. BioMed Central, 2013.
    <a href="https://doi.org/10.1186/1471-2148-13-54">https://doi.org/10.1186/1471-2148-13-54</a>.
  ieee: A. Kupczok and J. P. Bollback, “Probabilistic models for CRISPR spacer content
    evolution ,” <i>BMC Evolutionary Biology</i>, vol. 13, no. 1. BioMed Central,
    pp. 54–54, 2013.
  ista: Kupczok A, Bollback JP. 2013. Probabilistic models for CRISPR spacer content
    evolution . BMC Evolutionary Biology. 13(1), 54–54.
  mla: Kupczok, Anne, and Jonathan P. Bollback. “Probabilistic Models for CRISPR Spacer
    Content Evolution .” <i>BMC Evolutionary Biology</i>, vol. 13, no. 1, BioMed Central,
    2013, pp. 54–54, doi:<a href="https://doi.org/10.1186/1471-2148-13-54">10.1186/1471-2148-13-54</a>.
  short: A. Kupczok, J.P. Bollback, BMC Evolutionary Biology 13 (2013) 54–54.
corr_author: '1'
date_created: 2018-12-11T11:57:31Z
date_published: 2013-02-26T00:00:00Z
date_updated: 2025-09-29T14:15:59Z
day: '26'
ddc:
- '576'
department:
- _id: JoBo
doi: 10.1186/1471-2148-13-54
external_id:
  isi:
  - '000321524500001'
file:
- access_level: open_access
  checksum: 029c7e0b198c19312b66ecce3cabb22f
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:17:15Z
  date_updated: 2020-07-14T12:45:40Z
  file_id: '5268'
  file_name: IST-2015-397-v1+1_1471-2148-13-54.pdf
  file_size: 518729
  relation: main_file
file_date_updated: 2020-07-14T12:45:40Z
has_accepted_license: '1'
intvolume: '        13'
isi: 1
issue: '1'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: 54 - 54
publication: BMC Evolutionary Biology
publication_status: published
publisher: BioMed Central
publist_id: '4514'
pubrep_id: '397'
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Probabilistic models for CRISPR spacer content evolution '
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 13
year: '2013'
...
---
_id: '2413'
abstract:
- lang: eng
  text: 'Progress in understanding the global brain dynamics has remained slow to
    date in large part because of the highly multiscale nature of brain activity.
    Indeed, normal brain dynamics is characterized by complex interactions between
    multiple levels: from the microscopic scale of single neurons to the mesoscopic
    level of local groups of neurons, and finally to the macroscopic level of the
    whole brain. Among the most difficult tasks are those of identifying which scales
    are significant for a given particular function and describing how the scales
    affect each other. It is important to realize that the scales of time and space
    are linked together, or even intertwined, and that causal inference is far more
    ambiguous between than within levels. We approach this problem from the perspective
    of our recent work on simultaneous recording from micro- and macroelectrodes in
    the human brain. We propose a physiological description of these multilevel interactions,
    based on phase–amplitude coupling of neuronal oscillations that operate at multiple
    frequencies and on different spatial scales. Specifically, the amplitude of the
    oscillations on a particular spatial scale is modulated by phasic variations in
    neuronal excitability induced by lower frequency oscillations that emerge on a
    larger spatial scale. Following this general principle, it is possible to scale
    up or scale down the multiscale brain dynamics. It is expected that large-scale
    network oscillations in the low-frequency range, mediating downward effects, may
    play an important role in attention and consciousness.'
alternative_title:
- Reviews of Nonlinear Dynamics and Complexity
article_processing_charge: No
author:
- first_name: Mario
  full_name: Valderrama, Mario
  last_name: Valderrama
- first_name: Vicente
  full_name: Botella Soler, Vicente
  id: 421234E8-F248-11E8-B48F-1D18A9856A87
  last_name: Botella Soler
  orcid: 0000-0002-8790-1914
- first_name: Michel
  full_name: Le Van Quyen, Michel
  last_name: Le Van Quyen
citation:
  ama: 'Valderrama M, Botella Soler V, Le Van Quyen M. Neuronal oscillations scale
    up and scale down the brain dynamics . In: Meyer M, Pesenson Z, eds. <i>Multiscale
    Analysis and Nonlinear Dynamics: From Genes to the Brain</i>. Wiley; 2013. doi:<a
    href="https://doi.org/10.1002/9783527671632.ch08">10.1002/9783527671632.ch08</a>'
  apa: 'Valderrama, M., Botella Soler, V., &#38; Le Van Quyen, M. (2013). Neuronal
    oscillations scale up and scale down the brain dynamics . In M. Meyer &#38; Z.
    Pesenson (Eds.), <i>Multiscale Analysis and Nonlinear Dynamics: From Genes to
    the Brain</i>. Wiley. <a href="https://doi.org/10.1002/9783527671632.ch08">https://doi.org/10.1002/9783527671632.ch08</a>'
  chicago: 'Valderrama, Mario, Vicente Botella Soler, and Michel Le Van Quyen. “Neuronal
    Oscillations Scale up and Scale down the Brain Dynamics .” In <i>Multiscale Analysis
    and Nonlinear Dynamics: From Genes to the Brain</i>, edited by Misha Meyer and
    Z. Pesenson. Wiley, 2013. <a href="https://doi.org/10.1002/9783527671632.ch08">https://doi.org/10.1002/9783527671632.ch08</a>.'
  ieee: 'M. Valderrama, V. Botella Soler, and M. Le Van Quyen, “Neuronal oscillations
    scale up and scale down the brain dynamics ,” in <i>Multiscale Analysis and Nonlinear
    Dynamics: From Genes to the Brain</i>, M. Meyer and Z. Pesenson, Eds. Wiley, 2013.'
  ista: 'Valderrama M, Botella Soler V, Le Van Quyen M. 2013.Neuronal oscillations
    scale up and scale down the brain dynamics . In: Multiscale Analysis and Nonlinear
    Dynamics: From Genes to the Brain. Reviews of Nonlinear Dynamics and Complexity,
    .'
  mla: 'Valderrama, Mario, et al. “Neuronal Oscillations Scale up and Scale down the
    Brain Dynamics .” <i>Multiscale Analysis and Nonlinear Dynamics: From Genes to
    the Brain</i>, edited by Misha Meyer and Z. Pesenson, Wiley, 2013, doi:<a href="https://doi.org/10.1002/9783527671632.ch08">10.1002/9783527671632.ch08</a>.'
  short: 'M. Valderrama, V. Botella Soler, M. Le Van Quyen, in:, M. Meyer, Z. Pesenson
    (Eds.), Multiscale Analysis and Nonlinear Dynamics: From Genes to the Brain, Wiley,
    2013.'
date_created: 2018-12-11T11:57:31Z
date_published: 2013-08-01T00:00:00Z
date_updated: 2025-06-03T11:46:23Z
day: '01'
department:
- _id: GaTk
doi: 10.1002/9783527671632.ch08
editor:
- first_name: Misha
  full_name: Meyer, Misha
  last_name: Meyer
- first_name: Z.
  full_name: Pesenson, Z.
  last_name: Pesenson
language:
- iso: eng
month: '08'
oa_version: None
publication: 'Multiscale Analysis and Nonlinear Dynamics: From Genes to the Brain'
publication_identifier:
  eisbn:
  - '9783527671632'
  isbn:
  - '9783527411986 '
publication_status: published
publisher: Wiley
publist_id: '4513'
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Neuronal oscillations scale up and scale down the brain dynamics '
type: book_chapter
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2013'
...
---
_id: '2443'
abstract:
- lang: eng
  text: The mode of action of auxin is based on its non-uniform distribution within
    tissues and organs. Despite the wide use of several auxin analogues in research
    and agriculture, little is known about the specificity of different auxin-related
    transport and signalling processes towards these compounds. Using seedlings of
    Arabidopsis thaliana and suspension-cultured cells of Nicotiana tabacum (BY-2),
    the physiological activity of several auxin analogues was investigated, together
    with their capacity to induce auxin-dependent gene expression, to inhibit endocytosis
    and to be transported across the plasma membrane. This study shows that the specificity
    criteria for different auxin-related processes vary widely. Notably, the special
    behaviour of some synthetic auxin analogues suggests that they might be useful
    tools in investigations of the molecular mechanism of auxin action. Thus, due
    to their differential stimulatory effects on DR5 expression, indole-3-propionic
    (IPA) and 2,4,5-trichlorophenoxy acetic (2,4,5-T) acids can serve in studies of
    TRANSPORT INHIBITOR RESPONSE 1/AUXIN SIGNALLING F-BOX (TIR1/AFB)-mediated auxin
    signalling, and 5-fluoroindole-3-acetic acid (5-F-IAA) can help to discriminate
    between transcriptional and non-transcriptional pathways of auxin signalling.
    The results demonstrate that the major determinants for the auxin-like physiological
    potential of a particular compound are very complex and involve its chemical and
    metabolic stability, its ability to distribute in tissues in a polar manner and
    its activity towards auxin signalling machinery.
acknowledgement: The authors thank Dr Christian Luschnig (University of Natural Resources
  and Life Sciences (BOKU), Vienna, Austria) for the anti-PIN2 antibody, Professor
  Mark Estelle (University of California, San Diego, CA, USA) for tir1-1 mutant seeds
  and, last but not least, to Dr David Morris for critical reading of the manuscript.
  We also thank Markéta Pařezová and Jana Stýblová for excellent technical assistance.
  This work was supported by the Grant Agency of the Czech Republic (P305/11/0797
  to E.Z. and 13-40637S to J.F.), the Central European Institute of Technology project
  CZ.1.05/1.1.00/02.0068 from the European Regional Development Fund and by a European
  Research Council starting independent research grant ERC-2011-StG-20101109-PSDP
  (to J.F.).
article_processing_charge: No
article_type: original
author:
- first_name: Sibu
  full_name: Simon, Sibu
  id: 4542EF9A-F248-11E8-B48F-1D18A9856A87
  last_name: Simon
  orcid: 0000-0002-1998-6741
- first_name: Martin
  full_name: Kubeš, Martin
  last_name: Kubeš
- first_name: Pawel
  full_name: Baster, Pawel
  id: 3028BD74-F248-11E8-B48F-1D18A9856A87
  last_name: Baster
- first_name: Stéphanie
  full_name: Robert, Stéphanie
  last_name: Robert
- first_name: Petre
  full_name: Dobrev, Petre
  last_name: Dobrev
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Jan
  full_name: Petrášek, Jan
  last_name: Petrášek
- first_name: Eva
  full_name: Zažímalová, Eva
  last_name: Zažímalová
citation:
  ama: 'Simon S, Kubeš M, Baster P, et al. Defining the selectivity of processes along
    the auxin response chain: A study using auxin analogues. <i>New Phytologist</i>.
    2013;200(4):1034-1048. doi:<a href="https://doi.org/10.1111/nph.12437">10.1111/nph.12437</a>'
  apa: 'Simon, S., Kubeš, M., Baster, P., Robert, S., Dobrev, P., Friml, J., … Zažímalová,
    E. (2013). Defining the selectivity of processes along the auxin response chain:
    A study using auxin analogues. <i>New Phytologist</i>. Wiley. <a href="https://doi.org/10.1111/nph.12437">https://doi.org/10.1111/nph.12437</a>'
  chicago: 'Simon, Sibu, Martin Kubeš, Pawel Baster, Stéphanie Robert, Petre Dobrev,
    Jiří Friml, Jan Petrášek, and Eva Zažímalová. “Defining the Selectivity of Processes
    along the Auxin Response Chain: A Study Using Auxin Analogues.” <i>New Phytologist</i>.
    Wiley, 2013. <a href="https://doi.org/10.1111/nph.12437">https://doi.org/10.1111/nph.12437</a>.'
  ieee: 'S. Simon <i>et al.</i>, “Defining the selectivity of processes along the
    auxin response chain: A study using auxin analogues,” <i>New Phytologist</i>,
    vol. 200, no. 4. Wiley, pp. 1034–1048, 2013.'
  ista: 'Simon S, Kubeš M, Baster P, Robert S, Dobrev P, Friml J, Petrášek J, Zažímalová
    E. 2013. Defining the selectivity of processes along the auxin response chain:
    A study using auxin analogues. New Phytologist. 200(4), 1034–1048.'
  mla: 'Simon, Sibu, et al. “Defining the Selectivity of Processes along the Auxin
    Response Chain: A Study Using Auxin Analogues.” <i>New Phytologist</i>, vol. 200,
    no. 4, Wiley, 2013, pp. 1034–48, doi:<a href="https://doi.org/10.1111/nph.12437">10.1111/nph.12437</a>.'
  short: S. Simon, M. Kubeš, P. Baster, S. Robert, P. Dobrev, J. Friml, J. Petrášek,
    E. Zažímalová, New Phytologist 200 (2013) 1034–1048.
date_created: 2018-12-11T11:57:41Z
date_published: 2013-12-01T00:00:00Z
date_updated: 2025-09-29T14:15:18Z
day: '01'
department:
- _id: JiFr
doi: 10.1111/nph.12437
ec_funded: 1
external_id:
  isi:
  - '000330955300012'
intvolume: '       200'
isi: 1
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1111/nph.12437
month: '12'
oa: 1
oa_version: Published Version
page: 1034 - 1048
project:
- _id: 25716A02-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '282300'
  name: Polarity and subcellular dynamics in plants
publication: New Phytologist
publication_status: published
publisher: Wiley
publist_id: '4460'
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Defining the selectivity of processes along the auxin response chain: A study
  using auxin analogues'
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 200
year: '2013'
...
---
_id: '2444'
abstract:
- lang: eng
  text: 'We consider two core algorithmic problems for probabilistic verification:
    the maximal end-component decomposition and the almost-sure reachability set computation
    for Markov decision processes (MDPs). For MDPs with treewidth k, we present two
    improved static algorithms for both the problems that run in time O(n·k 2.38·2k
    ) and O(m·logn· k), respectively, where n is the number of states and m is the
    number of edges, significantly improving the previous known O(n·k·√n· k) bound
    for low treewidth. We also present decremental algorithms for both problems for
    MDPs with constant treewidth that run in amortized logarithmic time, which is
    a huge improvement over the previously known algorithms that require amortized
    linear time.'
alternative_title:
- LNCS
arxiv: 1
author:
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Jakub
  full_name: Ła̧Cki, Jakub
  last_name: Ła̧Cki
citation:
  ama: Chatterjee K, Ła̧Cki J. Faster algorithms for Markov decision processes with
    low treewidth. 2013;8044:543-558. doi:<a href="https://doi.org/10.1007/978-3-642-39799-8_36">10.1007/978-3-642-39799-8_36</a>
  apa: 'Chatterjee, K., &#38; Ła̧Cki, J. (2013). Faster algorithms for Markov decision
    processes with low treewidth. Presented at the CAV: Computer Aided Verification,
    St. Petersburg, Russia: Springer. <a href="https://doi.org/10.1007/978-3-642-39799-8_36">https://doi.org/10.1007/978-3-642-39799-8_36</a>'
  chicago: Chatterjee, Krishnendu, and Jakub Ła̧Cki. “Faster Algorithms for Markov
    Decision Processes with Low Treewidth.” Lecture Notes in Computer Science. Springer,
    2013. <a href="https://doi.org/10.1007/978-3-642-39799-8_36">https://doi.org/10.1007/978-3-642-39799-8_36</a>.
  ieee: K. Chatterjee and J. Ła̧Cki, “Faster algorithms for Markov decision processes
    with low treewidth,” vol. 8044. Springer, pp. 543–558, 2013.
  ista: Chatterjee K, Ła̧Cki J. 2013. Faster algorithms for Markov decision processes
    with low treewidth. 8044, 543–558.
  mla: Chatterjee, Krishnendu, and Jakub Ła̧Cki. <i>Faster Algorithms for Markov Decision
    Processes with Low Treewidth</i>. Vol. 8044, Springer, 2013, pp. 543–58, doi:<a
    href="https://doi.org/10.1007/978-3-642-39799-8_36">10.1007/978-3-642-39799-8_36</a>.
  short: K. Chatterjee, J. Ła̧Cki, 8044 (2013) 543–558.
conference:
  end_date: 2013-07-19
  location: St. Petersburg, Russia
  name: 'CAV: Computer Aided Verification'
  start_date: 2013-07-13
date_created: 2018-12-11T11:57:42Z
date_published: 2013-07-01T00:00:00Z
date_updated: 2020-08-11T10:09:47Z
day: '01'
department:
- _id: KrCh
doi: 10.1007/978-3-642-39799-8_36
ec_funded: 1
external_id:
  arxiv:
  - '1304.0084'
intvolume: '      8044'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1304.0084
month: '07'
oa: 1
oa_version: Preprint
page: 543 - 558
project:
- _id: 2584A770-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P 23499-N23
  name: Modern Graph Algorithmic Techniques in Formal Verification
- _id: 25863FF4-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S11407
  name: Game Theory
- _id: 2581B60A-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '279307'
  name: 'Quantitative Graph Games: Theory and Applications'
- _id: 2587B514-B435-11E9-9278-68D0E5697425
  name: Microsoft Research Faculty Fellowship
publication_status: published
publisher: Springer
publist_id: '4459'
quality_controlled: '1'
scopus_import: 1
series_title: Lecture Notes in Computer Science
status: public
title: Faster algorithms for Markov decision processes with low treewidth
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8044
year: '2013'
...
---
_id: '2445'
abstract:
- lang: eng
  text: We develop program synthesis techniques that can help programmers fix concurrency-related
    bugs. We make two new contributions to synthesis for concurrency, the first improving
    the efficiency of the synthesized code, and the second improving the efficiency
    of the synthesis procedure itself. The first contribution is to have the synthesis
    procedure explore a variety of (sequential) semantics-preserving program transformations.
    Classically, only one such transformation has been considered, namely, the insertion
    of synchronization primitives (such as locks). Based on common manual bug-fixing
    techniques used by Linux device-driver developers, we explore additional, more
    efficient transformations, such as the reordering of independent instructions.
    The second contribution is to speed up the counterexample-guided removal of concurrency
    bugs within the synthesis procedure by considering partial-order traces (instead
    of linear traces) as counterexamples. A partial-order error trace represents a
    set of linear (interleaved) traces of a concurrent program all of which lead to
    the same error. By eliminating a partial-order error trace, we eliminate in a
    single iteration of the synthesis procedure all linearizations of the partial-order
    trace. We evaluated our techniques on several simplified examples of real concurrency
    bugs that occurred in Linux device drivers.
alternative_title:
- LNCS
author:
- first_name: Pavol
  full_name: Cerny, Pavol
  id: 4DCBEFFE-F248-11E8-B48F-1D18A9856A87
  last_name: Cerny
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000−0002−2985−7724
- first_name: Arjun
  full_name: Radhakrishna, Arjun
  id: 3B51CAC4-F248-11E8-B48F-1D18A9856A87
  last_name: Radhakrishna
- first_name: Leonid
  full_name: Ryzhyk, Leonid
  last_name: Ryzhyk
- first_name: Thorsten
  full_name: Tarrach, Thorsten
  id: 3D6E8F2C-F248-11E8-B48F-1D18A9856A87
  last_name: Tarrach
  orcid: 0000-0003-4409-8487
citation:
  ama: 'Cerny P, Henzinger TA, Radhakrishna A, Ryzhyk L, Tarrach T. Efficient synthesis
    for concurrency by semantics-preserving transformations. In: Vol 8044. Springer;
    2013:951-967. doi:<a href="https://doi.org/10.1007/978-3-642-39799-8_68">10.1007/978-3-642-39799-8_68</a>'
  apa: 'Cerny, P., Henzinger, T. A., Radhakrishna, A., Ryzhyk, L., &#38; Tarrach,
    T. (2013). Efficient synthesis for concurrency by semantics-preserving transformations
    (Vol. 8044, pp. 951–967). Presented at the CAV: Computer Aided Verification, St.
    Petersburg, Russia: Springer. <a href="https://doi.org/10.1007/978-3-642-39799-8_68">https://doi.org/10.1007/978-3-642-39799-8_68</a>'
  chicago: Cerny, Pavol, Thomas A Henzinger, Arjun Radhakrishna, Leonid Ryzhyk, and
    Thorsten Tarrach. “Efficient Synthesis for Concurrency by Semantics-Preserving
    Transformations,” 8044:951–67. Springer, 2013. <a href="https://doi.org/10.1007/978-3-642-39799-8_68">https://doi.org/10.1007/978-3-642-39799-8_68</a>.
  ieee: 'P. Cerny, T. A. Henzinger, A. Radhakrishna, L. Ryzhyk, and T. Tarrach, “Efficient
    synthesis for concurrency by semantics-preserving transformations,” presented
    at the CAV: Computer Aided Verification, St. Petersburg, Russia, 2013, vol. 8044,
    pp. 951–967.'
  ista: 'Cerny P, Henzinger TA, Radhakrishna A, Ryzhyk L, Tarrach T. 2013. Efficient
    synthesis for concurrency by semantics-preserving transformations. CAV: Computer
    Aided Verification, LNCS, vol. 8044, 951–967.'
  mla: Cerny, Pavol, et al. <i>Efficient Synthesis for Concurrency by Semantics-Preserving
    Transformations</i>. Vol. 8044, Springer, 2013, pp. 951–67, doi:<a href="https://doi.org/10.1007/978-3-642-39799-8_68">10.1007/978-3-642-39799-8_68</a>.
  short: P. Cerny, T.A. Henzinger, A. Radhakrishna, L. Ryzhyk, T. Tarrach, in:, Springer,
    2013, pp. 951–967.
conference:
  end_date: 2013-07-19
  location: St. Petersburg, Russia
  name: 'CAV: Computer Aided Verification'
  start_date: 2013-07-13
date_created: 2018-12-11T11:57:42Z
date_published: 2013-07-01T00:00:00Z
date_updated: 2025-04-15T08:11:59Z
day: '01'
ddc:
- '000'
- '004'
department:
- _id: ToHe
doi: 10.1007/978-3-642-39799-8_68
ec_funded: 1
file:
- access_level: open_access
  checksum: 70c70ca5487faba82262c63e1b678a27
  content_type: application/pdf
  creator: system
  date_created: 2018-12-12T10:15:37Z
  date_updated: 2020-07-14T12:45:40Z
  file_id: '5158'
  file_name: IST-2014-199-v1+1_cav2013-final.pdf
  file_size: 365548
  relation: main_file
file_date_updated: 2020-07-14T12:45:40Z
has_accepted_license: '1'
intvolume: '      8044'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Submitted Version
page: 951 - 967
project:
- _id: 25EE3708-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '267989'
  name: Quantitative Reactive Modeling
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: S 11407_N23
  name: Rigorous Systems Engineering
publication_status: published
publisher: Springer
publist_id: '4458'
pubrep_id: '199'
quality_controlled: '1'
related_material:
  record:
  - id: '1130'
    relation: dissertation_contains
    status: public
scopus_import: 1
status: public
title: Efficient synthesis for concurrency by semantics-preserving transformations
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8044
year: '2013'
...
