---
OA_place: repository
OA_type: green
_id: '17991'
abstract:
- lang: eng
  text: Electrical and thermal transport properties of C60 molecules are investigated
    with density-functional-theory based calculations. These calculations suggest
    that the optimum contact geometry for an electrode terminated with a single-Au
    atom is through binding to one or two C-atoms of C60 with a tendency to promote
    the  sp2-hybridization into an  sp3-type one. Transport in these junctions is
    primarily through an unoccupied molecular orbital that is partly hybridized with
    the Au, which results in splitting the degeneracy of the lowest unoccupied molecular
    orbital triplet. The transmission through these junctions, however, cannot be
    modeled by a single Lorentzian resonance, as our results show evidence of quantum
    interference between an occupied and an unoccupied orbital. The interference results
    in a suppression of conductance around the Fermi energy. Our numerical findings
    are readily analyzed analytically within a simple two-level model.
article_number: '234701'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: G.
  full_name: Géranton, G.
  last_name: Géranton
- first_name: C.
  full_name: Seiler, C.
  last_name: Seiler
- first_name: A.
  full_name: Bagrets, A.
  last_name: Bagrets
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
- first_name: F.
  full_name: Evers, F.
  last_name: Evers
citation:
  ama: Géranton G, Seiler C, Bagrets A, Venkataraman L, Evers F. Transport properties
    of individual C60-molecules. <i>The Journal of Chemical Physics</i>. 2013;139(23).
    doi:<a href="https://doi.org/10.1063/1.4840535">10.1063/1.4840535</a>
  apa: Géranton, G., Seiler, C., Bagrets, A., Venkataraman, L., &#38; Evers, F. (2013).
    Transport properties of individual C60-molecules. <i>The Journal of Chemical Physics</i>.
    AIP Publishing. <a href="https://doi.org/10.1063/1.4840535">https://doi.org/10.1063/1.4840535</a>
  chicago: Géranton, G., C. Seiler, A. Bagrets, Latha Venkataraman, and F. Evers.
    “Transport Properties of Individual C60-Molecules.” <i>The Journal of Chemical
    Physics</i>. AIP Publishing, 2013. <a href="https://doi.org/10.1063/1.4840535">https://doi.org/10.1063/1.4840535</a>.
  ieee: G. Géranton, C. Seiler, A. Bagrets, L. Venkataraman, and F. Evers, “Transport
    properties of individual C60-molecules,” <i>The Journal of Chemical Physics</i>,
    vol. 139, no. 23. AIP Publishing, 2013.
  ista: Géranton G, Seiler C, Bagrets A, Venkataraman L, Evers F. 2013. Transport
    properties of individual C60-molecules. The Journal of Chemical Physics. 139(23),
    234701.
  mla: Géranton, G., et al. “Transport Properties of Individual C60-Molecules.” <i>The
    Journal of Chemical Physics</i>, vol. 139, no. 23, 234701, AIP Publishing, 2013,
    doi:<a href="https://doi.org/10.1063/1.4840535">10.1063/1.4840535</a>.
  short: G. Géranton, C. Seiler, A. Bagrets, L. Venkataraman, F. Evers, The Journal
    of Chemical Physics 139 (2013).
date_created: 2024-09-09T11:27:23Z
date_published: 2013-12-16T00:00:00Z
date_updated: 2025-01-03T07:51:59Z
day: '16'
doi: 10.1063/1.4840535
extern: '1'
external_id:
  arxiv:
  - '1206.1226'
fulldoi: https://doi.org/10.1063/1.4840535
intvolume: '       139'
issue: '23'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1206.1226
month: '12'
oa: 1
oa_version: Preprint
publication: The Journal of Chemical Physics
publication_identifier:
  eissn:
  - 1089-7690
  issn:
  - 0021-9606
publication_status: published
publisher: AIP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Transport properties of individual C60-molecules
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 139
year: '2013'
...
---
OA_type: closed access
_id: '17992'
abstract:
- lang: eng
  text: Here we demonstrate for the first time that strained silanes couple directly
    to gold electrodes in break-junction conductance measurements. We find that strained
    silicon molecular wires terminated by alkyl sulfide aurophiles behave effectively
    as single-molecule parallel circuits with competing sulfur-to-sulfur (low G) and
    sulfur-to-silacycle (high G) pathways. We can switch off the high conducting sulfur-to-silacycle
    pathway by altering the environment of the electrode surface to disable the Au–silacycle
    coupling. Additionally, we can switch between conductive pathways in a single
    molecular junction by modulating the tip–substrate electrode distance. This study
    provides a new molecular design to control electronics in silicon-based single
    molecule wires.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Timothy A.
  full_name: Su, Timothy A.
  last_name: Su
- first_name: Jonathan R.
  full_name: Widawsky, Jonathan R.
  last_name: Widawsky
- first_name: Haixing
  full_name: Li, Haixing
  last_name: Li
- first_name: Rebekka S.
  full_name: Klausen, Rebekka S.
  last_name: Klausen
- first_name: James L.
  full_name: Leighton, James L.
  last_name: Leighton
- first_name: Michael L.
  full_name: Steigerwald, Michael L.
  last_name: Steigerwald
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
- first_name: Colin
  full_name: Nuckolls, Colin
  last_name: Nuckolls
citation:
  ama: Su TA, Widawsky JR, Li H, et al. Silicon ring strain creates high-conductance
    pathways in single-molecule circuits. <i>Journal of the American Chemical Society</i>.
    2013;135(49):18331-18334. doi:<a href="https://doi.org/10.1021/ja410656a">10.1021/ja410656a</a>
  apa: Su, T. A., Widawsky, J. R., Li, H., Klausen, R. S., Leighton, J. L., Steigerwald,
    M. L., … Nuckolls, C. (2013). Silicon ring strain creates high-conductance pathways
    in single-molecule circuits. <i>Journal of the American Chemical Society</i>.
    American Chemical Society. <a href="https://doi.org/10.1021/ja410656a">https://doi.org/10.1021/ja410656a</a>
  chicago: Su, Timothy A., Jonathan R. Widawsky, Haixing Li, Rebekka S. Klausen, James
    L. Leighton, Michael L. Steigerwald, Latha Venkataraman, and Colin Nuckolls. “Silicon
    Ring Strain Creates High-Conductance Pathways in Single-Molecule Circuits.” <i>Journal
    of the American Chemical Society</i>. American Chemical Society, 2013. <a href="https://doi.org/10.1021/ja410656a">https://doi.org/10.1021/ja410656a</a>.
  ieee: T. A. Su <i>et al.</i>, “Silicon ring strain creates high-conductance pathways
    in single-molecule circuits,” <i>Journal of the American Chemical Society</i>,
    vol. 135, no. 49. American Chemical Society, pp. 18331–18334, 2013.
  ista: Su TA, Widawsky JR, Li H, Klausen RS, Leighton JL, Steigerwald ML, Venkataraman
    L, Nuckolls C. 2013. Silicon ring strain creates high-conductance pathways in
    single-molecule circuits. Journal of the American Chemical Society. 135(49), 18331–18334.
  mla: Su, Timothy A., et al. “Silicon Ring Strain Creates High-Conductance Pathways
    in Single-Molecule Circuits.” <i>Journal of the American Chemical Society</i>,
    vol. 135, no. 49, American Chemical Society, 2013, pp. 18331–34, doi:<a href="https://doi.org/10.1021/ja410656a">10.1021/ja410656a</a>.
  short: T.A. Su, J.R. Widawsky, H. Li, R.S. Klausen, J.L. Leighton, M.L. Steigerwald,
    L. Venkataraman, C. Nuckolls, Journal of the American Chemical Society 135 (2013)
    18331–18334.
date_created: 2024-09-09T11:29:00Z
date_published: 2013-11-21T00:00:00Z
date_updated: 2025-01-03T07:54:49Z
day: '21'
doi: 10.1021/ja410656a
extern: '1'
external_id:
  pmid:
  - '24261548'
fulldoi: https://doi.org/10.1021/ja410656a
intvolume: '       135'
issue: '49'
language:
- iso: eng
month: '11'
oa_version: None
page: 18331-18334
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Silicon ring strain creates high-conductance pathways in single-molecule circuits
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 135
year: '2013'
...
---
OA_type: closed access
_id: '17993'
abstract:
- lang: eng
  text: We demonstrate a new method of achieving rectification in single molecule
    devices using the high-bias properties of gold–carbon bonds. Our design for molecular
    rectifiers uses a symmetric, conjugated molecular backbone with a single methylsulfide
    group linking one end to a gold electrode and a covalent gold–carbon bond at the
    other end. The gold–carbon bond results in a hybrid gold-molecule “gateway” state
    pinned close to the Fermi level of one electrode. Through nonequilibrium transport
    calculations, we show that the energy of this state shifts drastically with applied
    bias, resulting in rectification at surprisingly low voltages. We use this concept
    to design and synthesize a family of diodes and demonstrate through single-molecule
    current–voltage measurements that the rectification ratio can be predictably and
    efficiently tuned. This result constitutes the first experimental demonstration
    of a rationally tunable system of single-molecule rectifiers. More generally,
    the results demonstrate that the high-bias properties of “gateway” states can
    be used to provide additional functionality to molecular electronic systems.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Arunabh
  full_name: Batra, Arunabh
  last_name: Batra
- first_name: Pierre
  full_name: Darancet, Pierre
  last_name: Darancet
- first_name: Qishui
  full_name: Chen, Qishui
  last_name: Chen
- first_name: Jeffrey S.
  full_name: Meisner, Jeffrey S.
  last_name: Meisner
- first_name: Jonathan R.
  full_name: Widawsky, Jonathan R.
  last_name: Widawsky
- first_name: Jeffrey B.
  full_name: Neaton, Jeffrey B.
  last_name: Neaton
- first_name: Colin
  full_name: Nuckolls, Colin
  last_name: Nuckolls
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
citation:
  ama: Batra A, Darancet P, Chen Q, et al. Tuning rectification in single-molecular
    diodes. <i>Nano Letters</i>. 2013;13(12):6233-6237. doi:<a href="https://doi.org/10.1021/nl403698m">10.1021/nl403698m</a>
  apa: Batra, A., Darancet, P., Chen, Q., Meisner, J. S., Widawsky, J. R., Neaton,
    J. B., … Venkataraman, L. (2013). Tuning rectification in single-molecular diodes.
    <i>Nano Letters</i>. American Chemical Society. <a href="https://doi.org/10.1021/nl403698m">https://doi.org/10.1021/nl403698m</a>
  chicago: Batra, Arunabh, Pierre Darancet, Qishui Chen, Jeffrey S. Meisner, Jonathan
    R. Widawsky, Jeffrey B. Neaton, Colin Nuckolls, and Latha Venkataraman. “Tuning
    Rectification in Single-Molecular Diodes.” <i>Nano Letters</i>. American Chemical
    Society, 2013. <a href="https://doi.org/10.1021/nl403698m">https://doi.org/10.1021/nl403698m</a>.
  ieee: A. Batra <i>et al.</i>, “Tuning rectification in single-molecular diodes,”
    <i>Nano Letters</i>, vol. 13, no. 12. American Chemical Society, pp. 6233–6237,
    2013.
  ista: Batra A, Darancet P, Chen Q, Meisner JS, Widawsky JR, Neaton JB, Nuckolls
    C, Venkataraman L. 2013. Tuning rectification in single-molecular diodes. Nano
    Letters. 13(12), 6233–6237.
  mla: Batra, Arunabh, et al. “Tuning Rectification in Single-Molecular Diodes.” <i>Nano
    Letters</i>, vol. 13, no. 12, American Chemical Society, 2013, pp. 6233–37, doi:<a
    href="https://doi.org/10.1021/nl403698m">10.1021/nl403698m</a>.
  short: A. Batra, P. Darancet, Q. Chen, J.S. Meisner, J.R. Widawsky, J.B. Neaton,
    C. Nuckolls, L. Venkataraman, Nano Letters 13 (2013) 6233–6237.
date_created: 2024-09-09T11:29:47Z
date_published: 2013-11-25T00:00:00Z
date_updated: 2025-01-03T07:57:04Z
day: '25'
doi: 10.1021/nl403698m
extern: '1'
external_id:
  pmid:
  - '24274757'
fulldoi: https://doi.org/10.1021/nl403698m
intvolume: '        13'
issue: '12'
language:
- iso: eng
month: '11'
oa_version: None
page: 6233-6237
pmid: 1
publication: Nano Letters
publication_identifier:
  eissn:
  - 1530-6992
  issn:
  - 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Tuning rectification in single-molecular diodes
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 13
year: '2013'
...
---
OA_type: closed access
_id: '17994'
abstract:
- lang: eng
  text: Charge transfer through noncovalent interactions is crucial to a variety of
    chemical phenomena. These interactions are often weak and nonspecific and can
    coexist, making it difficult to isolate the transfer efficiency of one type of
    bond versus another. Here, we show how core-hole clock spectroscopy can be used
    to measure charge transfer through noncovalent interactions. We study the model
    system 1,4-benzenediamine molecules bound on an Au surface through an Au–N donor–acceptor
    bond as these are known to provide a pathway for electronic conduction in molecular
    devices. We study different phases of the molecule/Au system and map charge delocalization
    times from carbon and nitrogen sites on the molecule. We show that charge delocalization
    across Au–N donor–acceptor bond occurs in less than 500 as. Furthermore, the Au–N
    bond also enhances delocalization times from neighboring carbon sites, demonstrating
    that fast charge transfer across a metal–organic interface does not require a
    covalently bonded system.
article_processing_charge: No
article_type: original
author:
- first_name: Gregor
  full_name: Kladnik, Gregor
  last_name: Kladnik
- first_name: Dean
  full_name: Cvetko, Dean
  last_name: Cvetko
- first_name: Arunabh
  full_name: Batra, Arunabh
  last_name: Batra
- first_name: Martina
  full_name: Dell’Angela, Martina
  last_name: Dell’Angela
- first_name: Albano
  full_name: Cossaro, Albano
  last_name: Cossaro
- first_name: Maria
  full_name: Kamenetska, Maria
  last_name: Kamenetska
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
- first_name: Alberto
  full_name: Morgante, Alberto
  last_name: Morgante
citation:
  ama: Kladnik G, Cvetko D, Batra A, et al. Ultrafast charge transfer through noncovalent
    Au–N interactions in molecular systems. <i>The Journal of Physical Chemistry C</i>.
    2013;117(32):16477-16482. doi:<a href="https://doi.org/10.1021/jp405229b">10.1021/jp405229b</a>
  apa: Kladnik, G., Cvetko, D., Batra, A., Dell’Angela, M., Cossaro, A., Kamenetska,
    M., … Morgante, A. (2013). Ultrafast charge transfer through noncovalent Au–N
    interactions in molecular systems. <i>The Journal of Physical Chemistry C</i>.
    American Chemical Society. <a href="https://doi.org/10.1021/jp405229b">https://doi.org/10.1021/jp405229b</a>
  chicago: Kladnik, Gregor, Dean Cvetko, Arunabh Batra, Martina Dell’Angela, Albano
    Cossaro, Maria Kamenetska, Latha Venkataraman, and Alberto Morgante. “Ultrafast
    Charge Transfer through Noncovalent Au–N Interactions in Molecular Systems.” <i>The
    Journal of Physical Chemistry C</i>. American Chemical Society, 2013. <a href="https://doi.org/10.1021/jp405229b">https://doi.org/10.1021/jp405229b</a>.
  ieee: G. Kladnik <i>et al.</i>, “Ultrafast charge transfer through noncovalent Au–N
    interactions in molecular systems,” <i>The Journal of Physical Chemistry C</i>,
    vol. 117, no. 32. American Chemical Society, pp. 16477–16482, 2013.
  ista: Kladnik G, Cvetko D, Batra A, Dell’Angela M, Cossaro A, Kamenetska M, Venkataraman
    L, Morgante A. 2013. Ultrafast charge transfer through noncovalent Au–N interactions
    in molecular systems. The Journal of Physical Chemistry C. 117(32), 16477–16482.
  mla: Kladnik, Gregor, et al. “Ultrafast Charge Transfer through Noncovalent Au–N
    Interactions in Molecular Systems.” <i>The Journal of Physical Chemistry C</i>,
    vol. 117, no. 32, American Chemical Society, 2013, pp. 16477–82, doi:<a href="https://doi.org/10.1021/jp405229b">10.1021/jp405229b</a>.
  short: G. Kladnik, D. Cvetko, A. Batra, M. Dell’Angela, A. Cossaro, M. Kamenetska,
    L. Venkataraman, A. Morgante, The Journal of Physical Chemistry C 117 (2013) 16477–16482.
date_created: 2024-09-09T11:30:45Z
date_published: 2013-07-17T00:00:00Z
date_updated: 2025-01-03T07:59:05Z
day: '17'
doi: 10.1021/jp405229b
extern: '1'
fulldoi: https://doi.org/10.1021/jp405229b
intvolume: '       117'
issue: '32'
language:
- iso: eng
month: '07'
oa_version: None
page: 16477-16482
publication: The Journal of Physical Chemistry C
publication_identifier:
  eissn:
  - 1932-7455
  issn:
  - 1932-7447
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Ultrafast charge transfer through noncovalent Au–N interactions in molecular
  systems
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 117
year: '2013'
...
---
OA_type: closed access
_id: '17995'
abstract:
- lang: eng
  text: We have measured the single-molecule conductance of a family of bithiophene
    derivatives terminated with methyl sulfide gold-binding linkers using a scanning
    tunneling microscope based break-junction technique. We find a broad distribution
    in the single-molecule conductance of bithiophene compared with that of a methyl
    sulfide terminated biphenyl. Using a combination of experiments and calculations,
    we show that this increased breadth in the conductance distribution is explained
    by the difference in 5-fold symmetry of thiophene rings as compared to the 6-fold
    symmetry of benzene rings. The reduced symmetry of thiophene rings results in
    a restriction on the torsion angle space available to these molecules when bound
    between two metal electrodes in a junction, causing each molecular junction to
    sample a different set of conformers in the conductance measurements. In contrast,
    the rotations of biphenyl are essentially unimpeded by junction binding, allowing
    each molecular junction to sample similar conformers. This work demonstrates that
    the conductance of bithiophene displays a strong dependence on the conformational
    fluctuations accessible within a given junction configuration, and that the symmetry
    of such small molecules can significantly influence their conductance behaviors.
article_processing_charge: No
article_type: letter_note
arxiv: 1
author:
- first_name: Emma J.
  full_name: Dell, Emma J.
  last_name: Dell
- first_name: Brian
  full_name: Capozzi, Brian
  last_name: Capozzi
- first_name: Kateri H.
  full_name: DuBay, Kateri H.
  last_name: DuBay
- first_name: Timothy C.
  full_name: Berkelbach, Timothy C.
  last_name: Berkelbach
- first_name: Jose Ricardo
  full_name: Moreno, Jose Ricardo
  last_name: Moreno
- first_name: David R.
  full_name: Reichman, David R.
  last_name: Reichman
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
- first_name: Luis M.
  full_name: Campos, Luis M.
  last_name: Campos
citation:
  ama: Dell EJ, Capozzi B, DuBay KH, et al. Impact of molecular symmetry on single-molecule
    conductance. <i>Journal of the American Chemical Society</i>. 2013;135(32):11724-11727.
    doi:<a href="https://doi.org/10.1021/ja4055367">10.1021/ja4055367</a>
  apa: Dell, E. J., Capozzi, B., DuBay, K. H., Berkelbach, T. C., Moreno, J. R., Reichman,
    D. R., … Campos, L. M. (2013). Impact of molecular symmetry on single-molecule
    conductance. <i>Journal of the American Chemical Society</i>. American Chemical
    Society. <a href="https://doi.org/10.1021/ja4055367">https://doi.org/10.1021/ja4055367</a>
  chicago: Dell, Emma J., Brian Capozzi, Kateri H. DuBay, Timothy C. Berkelbach, Jose
    Ricardo Moreno, David R. Reichman, Latha Venkataraman, and Luis M. Campos. “Impact
    of Molecular Symmetry on Single-Molecule Conductance.” <i>Journal of the American
    Chemical Society</i>. American Chemical Society, 2013. <a href="https://doi.org/10.1021/ja4055367">https://doi.org/10.1021/ja4055367</a>.
  ieee: E. J. Dell <i>et al.</i>, “Impact of molecular symmetry on single-molecule
    conductance,” <i>Journal of the American Chemical Society</i>, vol. 135, no. 32.
    American Chemical Society, pp. 11724–11727, 2013.
  ista: Dell EJ, Capozzi B, DuBay KH, Berkelbach TC, Moreno JR, Reichman DR, Venkataraman
    L, Campos LM. 2013. Impact of molecular symmetry on single-molecule conductance.
    Journal of the American Chemical Society. 135(32), 11724–11727.
  mla: Dell, Emma J., et al. “Impact of Molecular Symmetry on Single-Molecule Conductance.”
    <i>Journal of the American Chemical Society</i>, vol. 135, no. 32, American Chemical
    Society, 2013, pp. 11724–27, doi:<a href="https://doi.org/10.1021/ja4055367">10.1021/ja4055367</a>.
  short: E.J. Dell, B. Capozzi, K.H. DuBay, T.C. Berkelbach, J.R. Moreno, D.R. Reichman,
    L. Venkataraman, L.M. Campos, Journal of the American Chemical Society 135 (2013)
    11724–11727.
date_created: 2024-09-09T11:32:00Z
date_published: 2013-08-01T00:00:00Z
date_updated: 2025-01-03T08:00:57Z
day: '01'
doi: 10.1021/ja4055367
extern: '1'
external_id:
  arxiv:
  - '23905714'
fulldoi: https://doi.org/10.1021/ja4055367
intvolume: '       135'
issue: '32'
language:
- iso: eng
month: '08'
oa_version: None
page: 11724-11727
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Impact of molecular symmetry on single-molecule conductance
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 135
year: '2013'
...
---
OA_type: closed access
_id: '17996'
abstract:
- lang: eng
  text: We compare the conductance of a series of amine-terminated oligophenyl and
    alkane molecular junctions formed with Ag and Au electrodes using the scanning
    tunneling microscope based break-junction technique. For these molecules that
    conduct through the highest occupied molecular orbital, junctions formed with
    Au electrodes are more conductive than those formed with Ag electrodes, consistent
    with the lower work function for Ag. The measured conductance decays exponentially
    with molecular backbone length with a decay constant that is essentially the same
    for Ag and Au electrodes. However, the formation and evolution of molecular junctions
    upon elongation are very different for these two metals. Specifically, junctions
    formed with Ag electrodes sustain significantly longer elongation when compared
    with Au due to a difference in the initial gap opened up when the metal point-contact
    is broken. Using this observation and density functional theory calculations of
    junction structure and conductance we explain the trends observed in the single
    molecule junction conductance. Our work thus opens a new path to the conductance
    measurements of a single molecule junction in Ag electrodes.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Taekyeong
  full_name: Kim, Taekyeong
  last_name: Kim
- first_name: Héctor
  full_name: Vázquez, Héctor
  last_name: Vázquez
- first_name: Mark S.
  full_name: Hybertsen, Mark S.
  last_name: Hybertsen
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
citation:
  ama: Kim T, Vázquez H, Hybertsen MS, Venkataraman L. Conductance of molecular junctions
    formed with silver electrodes. <i>Nano Letters</i>. 2013;13(7):3358-3364. doi:<a
    href="https://doi.org/10.1021/nl401654s">10.1021/nl401654s</a>
  apa: Kim, T., Vázquez, H., Hybertsen, M. S., &#38; Venkataraman, L. (2013). Conductance
    of molecular junctions formed with silver electrodes. <i>Nano Letters</i>. American
    Chemical Society. <a href="https://doi.org/10.1021/nl401654s">https://doi.org/10.1021/nl401654s</a>
  chicago: Kim, Taekyeong, Héctor Vázquez, Mark S. Hybertsen, and Latha Venkataraman.
    “Conductance of Molecular Junctions Formed with Silver Electrodes.” <i>Nano Letters</i>.
    American Chemical Society, 2013. <a href="https://doi.org/10.1021/nl401654s">https://doi.org/10.1021/nl401654s</a>.
  ieee: T. Kim, H. Vázquez, M. S. Hybertsen, and L. Venkataraman, “Conductance of
    molecular junctions formed with silver electrodes,” <i>Nano Letters</i>, vol.
    13, no. 7. American Chemical Society, pp. 3358–3364, 2013.
  ista: Kim T, Vázquez H, Hybertsen MS, Venkataraman L. 2013. Conductance of molecular
    junctions formed with silver electrodes. Nano Letters. 13(7), 3358–3364.
  mla: Kim, Taekyeong, et al. “Conductance of Molecular Junctions Formed with Silver
    Electrodes.” <i>Nano Letters</i>, vol. 13, no. 7, American Chemical Society, 2013,
    pp. 3358–64, doi:<a href="https://doi.org/10.1021/nl401654s">10.1021/nl401654s</a>.
  short: T. Kim, H. Vázquez, M.S. Hybertsen, L. Venkataraman, Nano Letters 13 (2013)
    3358–3364.
date_created: 2024-09-09T11:32:49Z
date_published: 2013-06-03T00:00:00Z
date_updated: 2025-01-03T08:02:58Z
day: '03'
doi: 10.1021/nl401654s
extern: '1'
external_id:
  pmid:
  - '23731268'
fulldoi: https://doi.org/10.1021/nl401654s
intvolume: '        13'
issue: '7'
language:
- iso: eng
month: '06'
oa_version: None
page: 3358-3364
pmid: 1
publication: Nano Letters
publication_identifier:
  eissn:
  - 1530-6992
  issn:
  - 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Conductance of molecular junctions formed with silver electrodes
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 13
year: '2013'
...
---
OA_type: closed access
_id: '17997'
abstract:
- lang: eng
  text: We report the simultaneous measurement of conductance and thermopower of highly
    conducting single-molecule junctions using a scanning tunneling microscope-based
    break-junction setup. We start with molecular backbones (alkanes and oligophenyls)
    terminated with trimethyltin end groups that cleave off in situ to create junctions
    where terminal carbons are covalently bonded to the Au electrodes. We apply a
    thermal gradient across these junctions and measure their conductance and thermopower.
    Because of the electronic properties of the highly conducting Au–C links, the
    thermoelectric properties and power factor are very high. Our results show that
    the molecular thermopower increases nonlinearly with the molecular length while
    conductance decreases exponentially with increasing molecular length. Density
    functional theory calculations show that a gateway state representing the Au–C
    covalent bond plays a key role in the conductance. With this as input, we analyze
    a series of simplified models and show that a tight-binding model that explicitly
    includes the gateway states and the molecular backbone states accurately captures
    the experimentally measured conductance and thermopower trends.
article_processing_charge: No
article_type: letter_note
author:
- first_name: J. R.
  full_name: Widawsky, J. R.
  last_name: Widawsky
- first_name: W.
  full_name: Chen, W.
  last_name: Chen
- first_name: H.
  full_name: Vázquez, H.
  last_name: Vázquez
- first_name: T.
  full_name: Kim, T.
  last_name: Kim
- first_name: R.
  full_name: Breslow, R.
  last_name: Breslow
- first_name: M. S.
  full_name: Hybertsen, M. S.
  last_name: Hybertsen
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
citation:
  ama: Widawsky JR, Chen W, Vázquez H, et al. Length-dependent thermopower of highly
    conducting Au–C bonded single molecule junctions. <i>Nano Letters</i>. 2013;13(6):2889-2894.
    doi:<a href="https://doi.org/10.1021/nl4012276">10.1021/nl4012276</a>
  apa: Widawsky, J. R., Chen, W., Vázquez, H., Kim, T., Breslow, R., Hybertsen, M.
    S., &#38; Venkataraman, L. (2013). Length-dependent thermopower of highly conducting
    Au–C bonded single molecule junctions. <i>Nano Letters</i>. American Chemical
    Society. <a href="https://doi.org/10.1021/nl4012276">https://doi.org/10.1021/nl4012276</a>
  chicago: Widawsky, J. R., W. Chen, H. Vázquez, T. Kim, R. Breslow, M. S. Hybertsen,
    and Latha Venkataraman. “Length-Dependent Thermopower of Highly Conducting Au–C
    Bonded Single Molecule Junctions.” <i>Nano Letters</i>. American Chemical Society,
    2013. <a href="https://doi.org/10.1021/nl4012276">https://doi.org/10.1021/nl4012276</a>.
  ieee: J. R. Widawsky <i>et al.</i>, “Length-dependent thermopower of highly conducting
    Au–C bonded single molecule junctions,” <i>Nano Letters</i>, vol. 13, no. 6. American
    Chemical Society, pp. 2889–2894, 2013.
  ista: Widawsky JR, Chen W, Vázquez H, Kim T, Breslow R, Hybertsen MS, Venkataraman
    L. 2013. Length-dependent thermopower of highly conducting Au–C bonded single
    molecule junctions. Nano Letters. 13(6), 2889–2894.
  mla: Widawsky, J. R., et al. “Length-Dependent Thermopower of Highly Conducting
    Au–C Bonded Single Molecule Junctions.” <i>Nano Letters</i>, vol. 13, no. 6, American
    Chemical Society, 2013, pp. 2889–94, doi:<a href="https://doi.org/10.1021/nl4012276">10.1021/nl4012276</a>.
  short: J.R. Widawsky, W. Chen, H. Vázquez, T. Kim, R. Breslow, M.S. Hybertsen, L.
    Venkataraman, Nano Letters 13 (2013) 2889–2894.
date_created: 2024-09-09T11:33:33Z
date_published: 2013-05-17T00:00:00Z
date_updated: 2025-01-03T08:05:44Z
day: '17'
doi: 10.1021/nl4012276
extern: '1'
external_id:
  pmid:
  - '23682792'
fulldoi: https://doi.org/10.1021/nl4012276
intvolume: '        13'
issue: '6'
language:
- iso: eng
month: '05'
oa_version: None
page: 2889-2894
pmid: 1
publication: Nano Letters
publication_identifier:
  eissn:
  - 1530-6992
  issn:
  - 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Length-dependent thermopower of highly conducting Au–C bonded single molecule
  junctions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 13
year: '2013'
...
---
OA_type: closed access
_id: '17998'
abstract:
- lang: eng
  text: We measure simultaneously force and conductance of Ag metal point-contacts
    under ambient conditions at room temperature. We observe the formation of contacts
    with a conductance close to 1 G0, the quantum of conductance, which can be attributed
    to a single-atom contact, similar to those formed by Au. We also find two additional
    conductance features at ∼0.4 G0 and ∼1.3 G0, which have been previously ascribed
    to contacts with oxygen contaminations. Here, using a conductance cross-correlation
    technique, we distinguish three different atomic-scale structural motifs and analyze
    their rupture forces and stiffness. Our results allow us to assign the ∼0.4 G0
    conductance feature to an Ag–O–Ag contact and the ∼1.3 G0 feature to an Ag–Ag
    single-atom contact with an oxygen atom in parallel. Utilizing complementary information
    from force and conductance, we thus demonstrate the correlation of conductance
    with the structural evolution at the atomic scale.
article_processing_charge: No
article_type: original
author:
- first_name: Sriharsha V.
  full_name: Aradhya, Sriharsha V.
  last_name: Aradhya
- first_name: Michael
  full_name: Frei, Michael
  last_name: Frei
- first_name: András
  full_name: Halbritter, András
  last_name: Halbritter
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
citation:
  ama: Aradhya SV, Frei M, Halbritter A, Venkataraman L. Correlating structure, conductance,
    and mechanics of silver atomic-scale contacts. <i>ACS Nano</i>. 2013;7(4):3706-3712.
    doi:<a href="https://doi.org/10.1021/nn4007187">10.1021/nn4007187</a>
  apa: Aradhya, S. V., Frei, M., Halbritter, A., &#38; Venkataraman, L. (2013). Correlating
    structure, conductance, and mechanics of silver atomic-scale contacts. <i>ACS
    Nano</i>. American Chemical Society. <a href="https://doi.org/10.1021/nn4007187">https://doi.org/10.1021/nn4007187</a>
  chicago: Aradhya, Sriharsha V., Michael Frei, András Halbritter, and Latha Venkataraman.
    “Correlating Structure, Conductance, and Mechanics of Silver Atomic-Scale Contacts.”
    <i>ACS Nano</i>. American Chemical Society, 2013. <a href="https://doi.org/10.1021/nn4007187">https://doi.org/10.1021/nn4007187</a>.
  ieee: S. V. Aradhya, M. Frei, A. Halbritter, and L. Venkataraman, “Correlating structure,
    conductance, and mechanics of silver atomic-scale contacts,” <i>ACS Nano</i>,
    vol. 7, no. 4. American Chemical Society, pp. 3706–3712, 2013.
  ista: Aradhya SV, Frei M, Halbritter A, Venkataraman L. 2013. Correlating structure,
    conductance, and mechanics of silver atomic-scale contacts. ACS Nano. 7(4), 3706–3712.
  mla: Aradhya, Sriharsha V., et al. “Correlating Structure, Conductance, and Mechanics
    of Silver Atomic-Scale Contacts.” <i>ACS Nano</i>, vol. 7, no. 4, American Chemical
    Society, 2013, pp. 3706–12, doi:<a href="https://doi.org/10.1021/nn4007187">10.1021/nn4007187</a>.
  short: S.V. Aradhya, M. Frei, A. Halbritter, L. Venkataraman, ACS Nano 7 (2013)
    3706–3712.
date_created: 2024-09-09T11:34:27Z
date_published: 2013-03-23T00:00:00Z
date_updated: 2025-01-03T08:07:54Z
day: '23'
doi: 10.1021/nn4007187
extern: '1'
external_id:
  pmid:
  - '23521342'
fulldoi: https://doi.org/10.1021/nn4007187
intvolume: '         7'
issue: '4'
language:
- iso: eng
month: '03'
oa_version: None
page: 3706-3712
pmid: 1
publication: ACS Nano
publication_identifier:
  eissn:
  - 1936-086X
  issn:
  - 1936-0851
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Correlating structure, conductance, and mechanics of silver atomic-scale contacts
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 7
year: '2013'
...
---
OA_type: closed access
_id: '17999'
abstract:
- lang: eng
  text: The idea of using individual molecules as active electronic components provided
    the impetus to develop a variety of experimental platforms to probe their electronic
    transport properties. Among these, single-molecule junctions in a metal–molecule–metal
    motif have contributed significantly to our fundamental understanding of the principles
    required to realize molecular-scale electronic components from resistive wires
    to reversible switches. The success of these techniques and the growing interest
    of other disciplines in single-molecule-level characterization are prompting new
    approaches to investigate metal–molecule–metal junctions with multiple probes.
    Going beyond electronic transport characterization, these new studies are highlighting
    both the fundamental and applied aspects of mechanical, optical and thermoelectric
    properties at the atomic and molecular scales. Furthermore, experimental demonstrations
    of quantum interference and manipulation of electronic and nuclear spins in single-molecule
    circuits are heralding new device concepts with no classical analogues. In this
    Review, we present the emerging methods being used to interrogate multiple properties
    in single molecule-based devices, detail how these measurements have advanced
    our understanding of the structure–function relationships in molecular junctions,
    and discuss the potential for future research and applications.
article_processing_charge: No
article_type: original
author:
- first_name: Sriharsha V.
  full_name: Aradhya, Sriharsha V.
  last_name: Aradhya
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
citation:
  ama: Aradhya SV, Venkataraman L. Single-molecule junctions beyond electronic transport.
    <i>Nature Nanotechnology</i>. 2013;8(6):399-410. doi:<a href="https://doi.org/10.1038/nnano.2013.91">10.1038/nnano.2013.91</a>
  apa: Aradhya, S. V., &#38; Venkataraman, L. (2013). Single-molecule junctions beyond
    electronic transport. <i>Nature Nanotechnology</i>. Springer Nature. <a href="https://doi.org/10.1038/nnano.2013.91">https://doi.org/10.1038/nnano.2013.91</a>
  chicago: Aradhya, Sriharsha V., and Latha Venkataraman. “Single-Molecule Junctions
    beyond Electronic Transport.” <i>Nature Nanotechnology</i>. Springer Nature, 2013.
    <a href="https://doi.org/10.1038/nnano.2013.91">https://doi.org/10.1038/nnano.2013.91</a>.
  ieee: S. V. Aradhya and L. Venkataraman, “Single-molecule junctions beyond electronic
    transport,” <i>Nature Nanotechnology</i>, vol. 8, no. 6. Springer Nature, pp.
    399–410, 2013.
  ista: Aradhya SV, Venkataraman L. 2013. Single-molecule junctions beyond electronic
    transport. Nature Nanotechnology. 8(6), 399–410.
  mla: Aradhya, Sriharsha V., and Latha Venkataraman. “Single-Molecule Junctions beyond
    Electronic Transport.” <i>Nature Nanotechnology</i>, vol. 8, no. 6, Springer Nature,
    2013, pp. 399–410, doi:<a href="https://doi.org/10.1038/nnano.2013.91">10.1038/nnano.2013.91</a>.
  short: S.V. Aradhya, L. Venkataraman, Nature Nanotechnology 8 (2013) 399–410.
date_created: 2024-09-09T11:35:13Z
date_published: 2013-06-01T00:00:00Z
date_updated: 2025-01-03T08:10:06Z
day: '01'
doi: 10.1038/nnano.2013.91
extern: '1'
external_id:
  pmid:
  - '23736215'
fulldoi: https://doi.org/10.1038/nnano.2013.91
intvolume: '         8'
issue: '6'
language:
- iso: eng
month: '06'
oa_version: None
page: 399-410
pmid: 1
publication: Nature Nanotechnology
publication_identifier:
  eissn:
  - 1748-3395
  issn:
  - 1748-3387
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Single-molecule junctions beyond electronic transport
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2013'
...
---
_id: '18351'
abstract:
- lang: eng
  text: Motion-based segmentation is an important tool for the analysis of articulated
    shapes. As such, it plays an important role in mechanical engineering, computer
    graphics, and computer vision. In this chapter, we study motion-based segmentation
    of 3D articulated shapes. We formulate motion-based surface segmentation as a
    piecewise-smooth regularization problem for the transformations between several
    poses. Using Lie-group representation for the transformation at each surface point,
    we obtain a simple regularized fitting problem. An Ambrosio-Tortorelli scheme
    of a generalized Mumford-Shah model gives us the segmentation functional without
    assuming prior knowledge on the number of parts or even the articulated nature
    of the object. Experiments on several standard datasets compare the results of
    the proposed method to state-of-the-art algorithms.
alternative_title:
- Mathematics and Visualization
article_processing_charge: No
author:
- first_name: Guy
  full_name: Rosman, Guy
  last_name: Rosman
- first_name: Michael M.
  full_name: Bronstein, Michael M.
  last_name: Bronstein
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: Alon
  full_name: Wolf, Alon
  last_name: Wolf
- first_name: Ron
  full_name: Kimmel, Ron
  last_name: Kimmel
citation:
  ama: 'Rosman G, Bronstein MM, Bronstein AM, Wolf A, Kimmel R. Group-Valued Regularization
    for Motion Segmentation of Articulated Shapes. In: Breuß M, Bruckstein A, Maragos
    P, eds. <i>Innovations for Shape Analysis</i>. MATHVISUAL. Berlin, Heidelberg:
    Springer Nature; 2013:263-281. doi:<a href="https://doi.org/10.1007/978-3-642-34141-0_12">10.1007/978-3-642-34141-0_12</a>'
  apa: 'Rosman, G., Bronstein, M. M., Bronstein, A. M., Wolf, A., &#38; Kimmel, R.
    (2013). Group-Valued Regularization for Motion Segmentation of Articulated Shapes.
    In M. Breuß, A. Bruckstein, &#38; P. Maragos (Eds.), <i>Innovations for Shape
    Analysis</i> (pp. 263–281). Berlin, Heidelberg: Springer Nature. <a href="https://doi.org/10.1007/978-3-642-34141-0_12">https://doi.org/10.1007/978-3-642-34141-0_12</a>'
  chicago: 'Rosman, Guy, Michael M. Bronstein, Alex M. Bronstein, Alon Wolf, and Ron
    Kimmel. “Group-Valued Regularization for Motion Segmentation of Articulated Shapes.”
    In <i>Innovations for Shape Analysis</i>, edited by Michael Breuß, Alfred Bruckstein,
    and Petros Maragos, 263–81. MATHVISUAL. Berlin, Heidelberg: Springer Nature, 2013.
    <a href="https://doi.org/10.1007/978-3-642-34141-0_12">https://doi.org/10.1007/978-3-642-34141-0_12</a>.'
  ieee: 'G. Rosman, M. M. Bronstein, A. M. Bronstein, A. Wolf, and R. Kimmel, “Group-Valued
    Regularization for Motion Segmentation of Articulated Shapes,” in <i>Innovations
    for Shape Analysis</i>, M. Breuß, A. Bruckstein, and P. Maragos, Eds. Berlin,
    Heidelberg: Springer Nature, 2013, pp. 263–281.'
  ista: 'Rosman G, Bronstein MM, Bronstein AM, Wolf A, Kimmel R. 2013.Group-Valued
    Regularization for Motion Segmentation of Articulated Shapes. In: Innovations
    for Shape Analysis. Mathematics and Visualization, , 263–281.'
  mla: Rosman, Guy, et al. “Group-Valued Regularization for Motion Segmentation of
    Articulated Shapes.” <i>Innovations for Shape Analysis</i>, edited by Michael
    Breuß et al., Springer Nature, 2013, pp. 263–81, doi:<a href="https://doi.org/10.1007/978-3-642-34141-0_12">10.1007/978-3-642-34141-0_12</a>.
  short: G. Rosman, M.M. Bronstein, A.M. Bronstein, A. Wolf, R. Kimmel, in:, M. Breuß,
    A. Bruckstein, P. Maragos (Eds.), Innovations for Shape Analysis, Springer Nature,
    Berlin, Heidelberg, 2013, pp. 263–281.
date_created: 2024-10-15T11:20:54Z
date_published: 2013-04-04T00:00:00Z
date_updated: 2025-01-16T15:57:36Z
day: '04'
doi: 10.1007/978-3-642-34141-0_12
editor:
- first_name: Michael
  full_name: Breuß, Michael
  last_name: Breuß
- first_name: Alfred
  full_name: Bruckstein, Alfred
  last_name: Bruckstein
- first_name: Petros
  full_name: Maragos, Petros
  last_name: Maragos
extern: '1'
fulldoi: https://doi.org/10.1007/978-3-642-34141-0_12
language:
- iso: eng
month: '04'
oa_version: None
page: 263-281
place: Berlin, Heidelberg
publication: Innovations for Shape Analysis
publication_identifier:
  eisbn:
  - '9783642341410'
  isbn:
  - '9783642341403'
  issn:
  - 1612-3786
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
series_title: MATHVISUAL
status: public
title: Group-Valued Regularization for Motion Segmentation of Articulated Shapes
type: book_chapter
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
year: '2013'
...
---
_id: '18352'
abstract:
- lang: eng
  text: Feature-based analysis is becoming a very popular approach for geometric shape
    analysis. Following the success of this approach in image analysis, there is a
    growing interest in finding analogous methods in the 3D world. Maximally stable
    component detection is a low computation cost and high repeatability method for
    feature detection in images.In this study, a diffusion-geometry based framework
    for stable component detection is presented, which can be used for geometric feature
    detection in deformable shapes.The vast majority of studies of deformable 3D shapes
    models them as the two-dimensional boundary of the volume of the shape. Recent
    works have shown that a volumetric shape model is advantageous in numerous ways
    as it better captures the natural behavior of non-rigid deformations. We show
    that our framework easily adapts to this volumetric approach, and even demonstrates
    superior performance.A quantitative evaluation of our methods on the SHREC’10
    and SHREC’11 feature detection benchmarks as well as qualitative tests on the
    SCAPE dataset show its potential as a source of high-quality features. Examples
    demonstrating the drawbacks of surface stable components and the advantage of
    their volumetric counterparts are also presented.
alternative_title:
- Mathematics and Visualization
article_processing_charge: No
author:
- first_name: Roee
  full_name: Litman, Roee
  last_name: Litman
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: Michael M.
  full_name: Bronstein, Michael M.
  last_name: Bronstein
citation:
  ama: 'Litman R, Bronstein AM, Bronstein MM. Stable Semi-local Features for Non-rigid
    Shapes. In: Breuß M, Bruckstein A, Maragos P, eds. <i>Innovations for Shape Analysis</i>.
    MATHVISUAL. Berlin, Heidelberg: Springer Nature; 2013:161-189. doi:<a href="https://doi.org/10.1007/978-3-642-34141-0_8">10.1007/978-3-642-34141-0_8</a>'
  apa: 'Litman, R., Bronstein, A. M., &#38; Bronstein, M. M. (2013). Stable Semi-local
    Features for Non-rigid Shapes. In M. Breuß, A. Bruckstein, &#38; P. Maragos (Eds.),
    <i>Innovations for Shape Analysis</i> (pp. 161–189). Berlin, Heidelberg: Springer
    Nature. <a href="https://doi.org/10.1007/978-3-642-34141-0_8">https://doi.org/10.1007/978-3-642-34141-0_8</a>'
  chicago: 'Litman, Roee, Alex M. Bronstein, and Michael M. Bronstein. “Stable Semi-Local
    Features for Non-Rigid Shapes.” In <i>Innovations for Shape Analysis</i>, edited
    by Michael Breuß, Alfred Bruckstein, and Petros Maragos, 161–89. MATHVISUAL. Berlin,
    Heidelberg: Springer Nature, 2013. <a href="https://doi.org/10.1007/978-3-642-34141-0_8">https://doi.org/10.1007/978-3-642-34141-0_8</a>.'
  ieee: 'R. Litman, A. M. Bronstein, and M. M. Bronstein, “Stable Semi-local Features
    for Non-rigid Shapes,” in <i>Innovations for Shape Analysis</i>, M. Breuß, A.
    Bruckstein, and P. Maragos, Eds. Berlin, Heidelberg: Springer Nature, 2013, pp.
    161–189.'
  ista: 'Litman R, Bronstein AM, Bronstein MM. 2013.Stable Semi-local Features for
    Non-rigid Shapes. In: Innovations for Shape Analysis. Mathematics and Visualization,
    , 161–189.'
  mla: Litman, Roee, et al. “Stable Semi-Local Features for Non-Rigid Shapes.” <i>Innovations
    for Shape Analysis</i>, edited by Michael Breuß et al., Springer Nature, 2013,
    pp. 161–89, doi:<a href="https://doi.org/10.1007/978-3-642-34141-0_8">10.1007/978-3-642-34141-0_8</a>.
  short: R. Litman, A.M. Bronstein, M.M. Bronstein, in:, M. Breuß, A. Bruckstein,
    P. Maragos (Eds.), Innovations for Shape Analysis, Springer Nature, Berlin, Heidelberg,
    2013, pp. 161–189.
date_created: 2024-10-15T11:20:54Z
date_published: 2013-04-04T00:00:00Z
date_updated: 2025-01-16T15:50:22Z
day: '04'
doi: 10.1007/978-3-642-34141-0_8
editor:
- first_name: Michael
  full_name: Breuß, Michael
  last_name: Breuß
- first_name: Alfred
  full_name: Bruckstein, Alfred
  last_name: Bruckstein
- first_name: Petros
  full_name: Maragos, Petros
  last_name: Maragos
extern: '1'
fulldoi: https://doi.org/10.1007/978-3-642-34141-0_8
language:
- iso: eng
month: '04'
oa_version: None
page: 161 - 189
place: Berlin, Heidelberg
publication: Innovations for Shape Analysis
publication_identifier:
  eisbn:
  - '9783642341410'
  isbn:
  - '9783642341403'
  issn:
  - 1612-3786
publication_status: published
publisher: Springer Nature
series_title: MATHVISUAL
status: public
title: Stable Semi-local Features for Non-rigid Shapes
type: book_chapter
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
year: '2013'
...
---
_id: '18385'
abstract:
- lang: eng
  text: In this paper we present a framework for real time enhancement of speech signals.
    Our method leverages a new process-centric approach for sparse and parsimonious
    models, where the representation pursuit is obtained applying a deterministic
    function or process rather than solving an optimization problem. We first propose
    a rank-regularized robust version of non-negative matrix factorization (NMF) for
    modeling time-frequency representations of speech signals in which the spectral
    frames are decomposed as sparse linear combinations of atoms of a low-rank dictionary.
    Then, a parametric family of pursuit processes is derived from the iteration of
    the proximal descent method for solving this model. We present several experiments
    showing successful results and the potential of the proposed framework. Incorporating
    discriminative learning makes the proposed method significantly outperform exact
    NMF algorithms, with fixed latency and at a fraction of it's computational complexity.
article_number: '6637624'
article_processing_charge: No
author:
- first_name: Pablo
  full_name: Sprechmann, Pablo
  last_name: Sprechmann
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: Michael
  full_name: Bronstein, Michael
  last_name: Bronstein
- first_name: Guillermo
  full_name: Sapiro, Guillermo
  last_name: Sapiro
citation:
  ama: 'Sprechmann P, Bronstein AM, Bronstein M, Sapiro G. Learnable low rank sparse
    models for speech denoising. In: <i>2013 IEEE International Conference on Acoustics,
    Speech and Signal Processing</i>. IEEE; 2013. doi:<a href="https://doi.org/10.1109/icassp.2013.6637624">10.1109/icassp.2013.6637624</a>'
  apa: 'Sprechmann, P., Bronstein, A. M., Bronstein, M., &#38; Sapiro, G. (2013).
    Learnable low rank sparse models for speech denoising. In <i>2013 IEEE International
    Conference on Acoustics, Speech and Signal Processing</i>. Vancouver, BC, Canada:
    IEEE. <a href="https://doi.org/10.1109/icassp.2013.6637624">https://doi.org/10.1109/icassp.2013.6637624</a>'
  chicago: Sprechmann, Pablo, Alex M. Bronstein, Michael Bronstein, and Guillermo
    Sapiro. “Learnable Low Rank Sparse Models for Speech Denoising.” In <i>2013 IEEE
    International Conference on Acoustics, Speech and Signal Processing</i>. IEEE,
    2013. <a href="https://doi.org/10.1109/icassp.2013.6637624">https://doi.org/10.1109/icassp.2013.6637624</a>.
  ieee: P. Sprechmann, A. M. Bronstein, M. Bronstein, and G. Sapiro, “Learnable low
    rank sparse models for speech denoising,” in <i>2013 IEEE International Conference
    on Acoustics, Speech and Signal Processing</i>, Vancouver, BC, Canada, 2013.
  ista: Sprechmann P, Bronstein AM, Bronstein M, Sapiro G. 2013. Learnable low rank
    sparse models for speech denoising. 2013 IEEE International Conference on Acoustics,
    Speech and Signal Processing. 38th IEEE International Conference on Acoustics,
    Speech, and Signal Processing, 6637624.
  mla: Sprechmann, Pablo, et al. “Learnable Low Rank Sparse Models for Speech Denoising.”
    <i>2013 IEEE International Conference on Acoustics, Speech and Signal Processing</i>,
    6637624, IEEE, 2013, doi:<a href="https://doi.org/10.1109/icassp.2013.6637624">10.1109/icassp.2013.6637624</a>.
  short: P. Sprechmann, A.M. Bronstein, M. Bronstein, G. Sapiro, in:, 2013 IEEE International
    Conference on Acoustics, Speech and Signal Processing, IEEE, 2013.
conference:
  end_date: 2013-05-31
  location: Vancouver, BC, Canada
  name: 38th IEEE International Conference on Acoustics, Speech, and Signal Processing
  start_date: 2013-05-26
date_created: 2024-10-15T11:20:54Z
date_published: 2013-10-21T00:00:00Z
date_updated: 2024-12-04T13:34:16Z
day: '21'
doi: 10.1109/icassp.2013.6637624
extern: '1'
fulldoi: https://doi.org/10.1109/icassp.2013.6637624
language:
- iso: eng
month: '10'
oa_version: None
publication: 2013 IEEE International Conference on Acoustics, Speech and Signal Processing
publication_identifier:
  eisbn:
  - '9781479903566'
  eissn:
  - 2379-190X
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Learnable low rank sparse models for speech denoising
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
year: '2013'
...
---
_id: '18386'
abstract:
- lang: eng
  text: A method for removing impulse noise from audio signals by fusing multiple
    copies of the same recording is introduced in this paper. The proposed algorithm
    exploits the fact that while in general multiple copies of a given recording are
    available, all sharing the same master, most degradations in audio signals are
    record-dependent. Our method first seeks for the optimal non-rigid alignment of
    the signals that is robust to the presence of sparse outliers with arbitrary magnitude.
    Unlike previous approaches, we simultaneously find the optimal alignment of the
    signals and impulsive degradation. This is obtained via continuous dynamic time
    warping computed solving an Eikonal equation. We propose to use our approach in
    the derivative domain, reconstructing the signal by solving an inverse problem
    that resembles the Poisson image editing technique. The proposed framework is
    here illustrated and tested in the restoration of old gramophone recordings showing
    promising results; however, it can be used in other applications where different
    copies of the signal of interest are available and the degradations are copy-dependent.
article_number: '6637774'
article_processing_charge: No
author:
- first_name: Pablo
  full_name: Sprechmann, Pablo
  last_name: Sprechmann
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: Jean-Michel
  full_name: Morel, Jean-Michel
  last_name: Morel
- first_name: Guillermo
  full_name: Sapiro, Guillermo
  last_name: Sapiro
citation:
  ama: 'Sprechmann P, Bronstein AM, Morel J-M, Sapiro G. Audio restoration from multiple
    copies. In: <i>2013 IEEE International Conference on Acoustics, Speech and Signal
    Processing</i>. IEEE; 2013. doi:<a href="https://doi.org/10.1109/icassp.2013.6637774">10.1109/icassp.2013.6637774</a>'
  apa: 'Sprechmann, P., Bronstein, A. M., Morel, J.-M., &#38; Sapiro, G. (2013). Audio
    restoration from multiple copies. In <i>2013 IEEE International Conference on
    Acoustics, Speech and Signal Processing</i>. Vancouver, BC, Canada: IEEE. <a href="https://doi.org/10.1109/icassp.2013.6637774">https://doi.org/10.1109/icassp.2013.6637774</a>'
  chicago: Sprechmann, Pablo, Alex M. Bronstein, Jean-Michel Morel, and Guillermo
    Sapiro. “Audio Restoration from Multiple Copies.” In <i>2013 IEEE International
    Conference on Acoustics, Speech and Signal Processing</i>. IEEE, 2013. <a href="https://doi.org/10.1109/icassp.2013.6637774">https://doi.org/10.1109/icassp.2013.6637774</a>.
  ieee: P. Sprechmann, A. M. Bronstein, J.-M. Morel, and G. Sapiro, “Audio restoration
    from multiple copies,” in <i>2013 IEEE International Conference on Acoustics,
    Speech and Signal Processing</i>, Vancouver, BC, Canada, 2013.
  ista: Sprechmann P, Bronstein AM, Morel J-M, Sapiro G. 2013. Audio restoration from
    multiple copies. 2013 IEEE International Conference on Acoustics, Speech and Signal
    Processing. 38th IEEE International Conference on Acoustics, Speech, and Signal
    Processing, 6637774.
  mla: Sprechmann, Pablo, et al. “Audio Restoration from Multiple Copies.” <i>2013
    IEEE International Conference on Acoustics, Speech and Signal Processing</i>,
    6637774, IEEE, 2013, doi:<a href="https://doi.org/10.1109/icassp.2013.6637774">10.1109/icassp.2013.6637774</a>.
  short: P. Sprechmann, A.M. Bronstein, J.-M. Morel, G. Sapiro, in:, 2013 IEEE International
    Conference on Acoustics, Speech and Signal Processing, IEEE, 2013.
conference:
  end_date: 2013-05-31
  location: Vancouver, BC, Canada
  name: 38th IEEE International Conference on Acoustics, Speech, and Signal Processing
  start_date: 2013-05-26
date_created: 2024-10-15T11:20:54Z
date_published: 2013-10-21T00:00:00Z
date_updated: 2024-12-04T13:05:44Z
day: '21'
doi: 10.1109/icassp.2013.6637774
extern: '1'
fulldoi: https://doi.org/10.1109/icassp.2013.6637774
language:
- iso: eng
month: '10'
oa_version: None
publication: 2013 IEEE International Conference on Acoustics, Speech and Signal Processing
publication_identifier:
  eisbn:
  - '9781479903566'
  eissn:
  - 2379-190X
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Audio restoration from multiple copies
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
year: '2013'
...
---
_id: '18395'
abstract:
- lang: eng
  text: Dynamic Time Warping (DTW), is a simple but efficient technique for matching
    sequences with rigid deformation. Therefore, it is frequently used for matching
    shapes in general, and shapes of handwritten words in Document Image Analysis
    tasks. As DTW is computationally expensive, efficient algorithms for fast computation
    are crucial. Retrieving images from large scale datasets using DTW, suffers from
    the constraint of linear searching of all sample in the datasets. Fast approximation
    algorithms for image retrieval are mostly based on normed spaces where the triangle
    inequality holds, which is unfortunately not the case with the DTW metric. In
    this paper we present a novel approach for fast search of handwritten words within
    large datasets of shapes. The presented approach is based on the Boost-Map [1]
    algorithm, for embedding the feature space with the DTW measurement to an euclidean
    space and use the Local Sensitivity Hashing algorithm (LSH) to rank the k-nearest
    neighbors of a query image. The algorithm, first, processes and embeds objects
    of the large data sets to a normed space. Fast approximation of k-nearest neighbors
    using LSH on the embedding space, generates the top kranked samples which are
    examined using the real DTW distance to give final accurate results. We demonstrate
    our method on a database of 45; 800 images of word-parts extracted from the IFN/ENIT
    database [11] and images collected from 51 different writers. Our method achieves
    a speedup of 4 orders of magnitude over the exact method, at the cost of only
    a 2:2% reduction in accuracy.
article_number: '6424484'
article_processing_charge: No
author:
- first_name: Raid
  full_name: Saabni, Raid
  last_name: Saabni
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
citation:
  ama: 'Saabni R, Bronstein AM. Fast key-word searching using “BoostMap” based embedding.
    In: <i>2012 International Conference on Frontiers in Handwriting Recognition</i>.
    IEEE; 2013. doi:<a href="https://doi.org/10.1109/icfhr.2012.204">10.1109/icfhr.2012.204</a>'
  apa: 'Saabni, R., &#38; Bronstein, A. M. (2013). Fast key-word searching using “BoostMap”
    based embedding. In <i>2012 International Conference on Frontiers in Handwriting
    Recognition</i>. Bari, Italy: IEEE. <a href="https://doi.org/10.1109/icfhr.2012.204">https://doi.org/10.1109/icfhr.2012.204</a>'
  chicago: Saabni, Raid, and Alex M. Bronstein. “Fast Key-Word Searching Using ‘BoostMap’
    Based Embedding.” In <i>2012 International Conference on Frontiers in Handwriting
    Recognition</i>. IEEE, 2013. <a href="https://doi.org/10.1109/icfhr.2012.204">https://doi.org/10.1109/icfhr.2012.204</a>.
  ieee: R. Saabni and A. M. Bronstein, “Fast key-word searching using ‘BoostMap’ based
    embedding,” in <i>2012 International Conference on Frontiers in Handwriting Recognition</i>,
    Bari, Italy, 2013.
  ista: Saabni R, Bronstein AM. 2013. Fast key-word searching using ‘BoostMap’ based
    embedding. 2012 International Conference on Frontiers in Handwriting Recognition.
    13th International Conference on Frontiers in Handwriting Recognition, 6424484.
  mla: Saabni, Raid, and Alex M. Bronstein. “Fast Key-Word Searching Using ‘BoostMap’
    Based Embedding.” <i>2012 International Conference on Frontiers in Handwriting
    Recognition</i>, 6424484, IEEE, 2013, doi:<a href="https://doi.org/10.1109/icfhr.2012.204">10.1109/icfhr.2012.204</a>.
  short: R. Saabni, A.M. Bronstein, in:, 2012 International Conference on Frontiers
    in Handwriting Recognition, IEEE, 2013.
conference:
  end_date: 2012-09-20
  location: Bari, Italy
  name: 13th International Conference on Frontiers in Handwriting Recognition
  start_date: 2012-09-18
date_created: 2024-10-15T11:20:54Z
date_published: 2013-01-31T00:00:00Z
date_updated: 2024-12-04T13:00:18Z
day: '31'
doi: 10.1109/icfhr.2012.204
extern: '1'
fulldoi: https://doi.org/10.1109/icfhr.2012.204
language:
- iso: eng
month: '01'
oa_version: None
publication: 2012 International Conference on Frontiers in Handwriting Recognition
publication_identifier:
  isbn:
  - '9781467322621'
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Fast key-word searching using 'BoostMap' based embedding
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
year: '2013'
...
---
_id: '18421'
abstract:
- lang: eng
  text: The use of Laplacian eigenbases has been shown to be fruitful in many computer
    graphics applications. Today, state-of-the-art approaches to shape analysis, synthesis,
    and correspondence rely on these natural harmonic bases that allow using classical
    tools from harmonic analysis on manifolds. However, many applications involving
    multiple shapes are obstacled by the fact that Laplacian eigenbases computed independently
    on different shapes are often incompatible with each other. In this paper, we
    propose the construction of common approximate eigenbases for multiple shapes
    using approximate joint diagonalization algorithms, taking as input a set of corresponding
    functions (e.g. indicator functions of stable regions) on the two shapes. We illustrate
    the benefits of the proposed approach on tasks from shape editing, pose transfer,
    correspondence, and similarity.
article_processing_charge: No
arxiv: 1
author:
- first_name: A.
  full_name: Kovnatsky, A.
  last_name: Kovnatsky
- first_name: M. M.
  full_name: Bronstein, M. M.
  last_name: Bronstein
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: K.
  full_name: Glashoff, K.
  last_name: Glashoff
- first_name: R.
  full_name: Kimmel, R.
  last_name: Kimmel
citation:
  ama: Kovnatsky A, Bronstein MM, Bronstein AM, Glashoff K, Kimmel R. Coupled quasi‐harmonic
    bases. <i>Computer Graphics Forum</i>. 2013;32(2pt4):439-448. doi:<a href="https://doi.org/10.1111/cgf.12064">10.1111/cgf.12064</a>
  apa: Kovnatsky, A., Bronstein, M. M., Bronstein, A. M., Glashoff, K., &#38; Kimmel,
    R. (2013). Coupled quasi‐harmonic bases. <i>Computer Graphics Forum</i>. Wiley.
    <a href="https://doi.org/10.1111/cgf.12064">https://doi.org/10.1111/cgf.12064</a>
  chicago: Kovnatsky, A., M. M. Bronstein, Alex M. Bronstein, K. Glashoff, and R.
    Kimmel. “Coupled Quasi‐harmonic Bases.” <i>Computer Graphics Forum</i>. Wiley,
    2013. <a href="https://doi.org/10.1111/cgf.12064">https://doi.org/10.1111/cgf.12064</a>.
  ieee: A. Kovnatsky, M. M. Bronstein, A. M. Bronstein, K. Glashoff, and R. Kimmel,
    “Coupled quasi‐harmonic bases,” <i>Computer Graphics Forum</i>, vol. 32, no. 2pt4.
    Wiley, pp. 439–448, 2013.
  ista: Kovnatsky A, Bronstein MM, Bronstein AM, Glashoff K, Kimmel R. 2013. Coupled
    quasi‐harmonic bases. Computer Graphics Forum. 32(2pt4), 439–448.
  mla: Kovnatsky, A., et al. “Coupled Quasi‐harmonic Bases.” <i>Computer Graphics
    Forum</i>, vol. 32, no. 2pt4, Wiley, 2013, pp. 439–48, doi:<a href="https://doi.org/10.1111/cgf.12064">10.1111/cgf.12064</a>.
  short: A. Kovnatsky, M.M. Bronstein, A.M. Bronstein, K. Glashoff, R. Kimmel, Computer
    Graphics Forum 32 (2013) 439–448.
date_created: 2024-10-15T11:20:55Z
date_published: 2013-05-01T00:00:00Z
date_updated: 2024-12-19T10:02:12Z
day: '01'
doi: 10.1111/cgf.12064
extern: '1'
external_id:
  arxiv:
  - '1210.0026'
fulldoi: https://doi.org/10.1111/cgf.12064
intvolume: '        32'
issue: 2pt4
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1210.0026
month: '05'
oa: 1
oa_version: Preprint
page: 439-448
publication: Computer Graphics Forum
publication_identifier:
  eissn:
  - 1467-8659
  issn:
  - 0167-7055
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Coupled quasi‐harmonic bases
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 32
year: '2013'
...
---
_id: '18422'
abstract:
- lang: eng
  text: We present a novel sparse modeling approach to non-rigid shape matching using
    only the ability to detect repeatable regions. As the input to our algorithm,
    we are given only two sets of regions in two shapes; no descriptors are provided
    so the correspondence between the regions is not know, nor we know how many regions
    correspond in the two shapes. We show that even with such scarce information,
    it is possible to establish very accurate correspondence between the shapes by
    using methods from the field of sparse modeling, being this, the first non-trivial
    use of sparse models in shape correspondence. We formulate the problem of permuted
    sparse coding, in which we solve simultaneously for an unknown permutation ordering
    the regions on two shapes and for an unknown correspondence in functional representation.
    We also propose a robust variant capable of handling incomplete matches. Numerically,
    the problem is solved efficiently by alternating the solution of a linear assignment
    and a sparse coding problem. The proposed methods are evaluated qualitatively
    and quantitatively on standard benchmarks containing both synthetic and scanned
    objects.
article_processing_charge: No
arxiv: 1
author:
- first_name: J.
  full_name: Pokrass, J.
  last_name: Pokrass
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: M. M.
  full_name: Bronstein, M. M.
  last_name: Bronstein
- first_name: P.
  full_name: Sprechmann, P.
  last_name: Sprechmann
- first_name: G.
  full_name: Sapiro, G.
  last_name: Sapiro
citation:
  ama: Pokrass J, Bronstein AM, Bronstein MM, Sprechmann P, Sapiro G. Sparse modeling
    of intrinsic correspondences. <i>Computer Graphics Forum</i>. 2013;32(2pt4):459-468.
    doi:<a href="https://doi.org/10.1111/cgf.12066">10.1111/cgf.12066</a>
  apa: Pokrass, J., Bronstein, A. M., Bronstein, M. M., Sprechmann, P., &#38; Sapiro,
    G. (2013). Sparse modeling of intrinsic correspondences. <i>Computer Graphics
    Forum</i>. Wiley. <a href="https://doi.org/10.1111/cgf.12066">https://doi.org/10.1111/cgf.12066</a>
  chicago: Pokrass, J., Alex M. Bronstein, M. M. Bronstein, P. Sprechmann, and G.
    Sapiro. “Sparse Modeling of Intrinsic Correspondences.” <i>Computer Graphics Forum</i>.
    Wiley, 2013. <a href="https://doi.org/10.1111/cgf.12066">https://doi.org/10.1111/cgf.12066</a>.
  ieee: J. Pokrass, A. M. Bronstein, M. M. Bronstein, P. Sprechmann, and G. Sapiro,
    “Sparse modeling of intrinsic correspondences,” <i>Computer Graphics Forum</i>,
    vol. 32, no. 2pt4. Wiley, pp. 459–468, 2013.
  ista: Pokrass J, Bronstein AM, Bronstein MM, Sprechmann P, Sapiro G. 2013. Sparse
    modeling of intrinsic correspondences. Computer Graphics Forum. 32(2pt4), 459–468.
  mla: Pokrass, J., et al. “Sparse Modeling of Intrinsic Correspondences.” <i>Computer
    Graphics Forum</i>, vol. 32, no. 2pt4, Wiley, 2013, pp. 459–68, doi:<a href="https://doi.org/10.1111/cgf.12066">10.1111/cgf.12066</a>.
  short: J. Pokrass, A.M. Bronstein, M.M. Bronstein, P. Sprechmann, G. Sapiro, Computer
    Graphics Forum 32 (2013) 459–468.
date_created: 2024-10-15T11:20:55Z
date_published: 2013-05-01T00:00:00Z
date_updated: 2024-12-19T09:57:17Z
day: '01'
doi: 10.1111/cgf.12066
extern: '1'
external_id:
  arxiv:
  - '1209.6560'
fulldoi: https://doi.org/10.1111/cgf.12066
intvolume: '        32'
issue: 2pt4
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1209.6560
month: '05'
oa: 1
oa_version: Preprint
page: 459-468
publication: Computer Graphics Forum
publication_identifier:
  eissn:
  - 1467-8659
  issn:
  - 0167-7055
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Sparse modeling of intrinsic correspondences
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 32
year: '2013'
...
---
DOAJ_listed: '1'
_id: '18437'
abstract:
- lang: eng
  text: "\r\n\r\nElg1 and Srs2 are two proteins involved in maintaining genome stability
    in yeast. After DNA damage, the homotrimeric clamp PCNA, which provides stability
    and processivity to DNA polymerases and serves as a docking platform for DNA repair
    enzymes, undergoes modification by the ubiquitin-like molecule SUMO. PCNA SUMOylation
    helps recruit Srs2 and Elg1 to the replication fork. In the absence of Elg1, both
    SUMOylated PCNA and Srs2 accumulate at the chromatin fraction, indicating that
    Elg1 is required for removing SUMOylated PCNA and Srs2 from DNA. Despite this
    interaction, which suggests that the two proteins work together, double mutants
    elg1Δ srs2Δ have severely impaired growth as haploids and exhibit synergistic
    sensitivity to DNA damage and a synergistic increase in gene conversion. In addition,
    diploid elg1Δ srs2Δ double mutants are dead, which implies that an essential function
    in the cell requires at least one of the two gene products for survival. To gain
    information about this essential function, we have carried out a high copy number
    suppressor screen to search for genes that, when overexpressed, suppress the synthetic
    lethality between elg1Δ and srs2Δ. We report the identification of 36 such genes,
    which are enriched for functions related to DNA- and chromatin-binding, chromatin
    packaging and modification, and mRNA export from the nucleus."
article_processing_charge: No
author:
- first_name: Inbal
  full_name: Gazy, Inbal
  last_name: Gazy
- first_name: Batia
  full_name: Liefshitz, Batia
  last_name: Liefshitz
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: Oren
  full_name: Parnas, Oren
  last_name: Parnas
- first_name: Nir
  full_name: Atias, Nir
  last_name: Atias
- first_name: Roded
  full_name: Sharan, Roded
  last_name: Sharan
- first_name: Martin
  full_name: Kupiec, Martin
  last_name: Kupiec
citation:
  ama: 'Gazy I, Liefshitz B, Bronstein AM, et al. A genetic screen for high copy number
    suppressors of the synthetic lethality between elg1Δ and srs2Δ in yeast. <i> G3:
    Genes, Genomes, Genetics</i>. 2013;3(5):917-926. doi:<a href="https://doi.org/10.1534/g3.113.005561">10.1534/g3.113.005561</a>'
  apa: 'Gazy, I., Liefshitz, B., Bronstein, A. M., Parnas, O., Atias, N., Sharan,
    R., &#38; Kupiec, M. (2013). A genetic screen for high copy number suppressors
    of the synthetic lethality between elg1Δ and srs2Δ in yeast. <i> G3: Genes, Genomes,
    Genetics</i>. Oxford University Press. <a href="https://doi.org/10.1534/g3.113.005561">https://doi.org/10.1534/g3.113.005561</a>'
  chicago: 'Gazy, Inbal, Batia Liefshitz, Alex M. Bronstein, Oren Parnas, Nir Atias,
    Roded Sharan, and Martin Kupiec. “A Genetic Screen for High Copy Number Suppressors
    of the Synthetic Lethality between Elg1Δ and Srs2Δ in Yeast.” <i> G3: Genes, Genomes,
    Genetics</i>. Oxford University Press, 2013. <a href="https://doi.org/10.1534/g3.113.005561">https://doi.org/10.1534/g3.113.005561</a>.'
  ieee: 'I. Gazy <i>et al.</i>, “A genetic screen for high copy number suppressors
    of the synthetic lethality between elg1Δ and srs2Δ in yeast,” <i> G3: Genes, Genomes,
    Genetics</i>, vol. 3, no. 5. Oxford University Press, pp. 917–926, 2013.'
  ista: 'Gazy I, Liefshitz B, Bronstein AM, Parnas O, Atias N, Sharan R, Kupiec M.
    2013. A genetic screen for high copy number suppressors of the synthetic lethality
    between elg1Δ and srs2Δ in yeast.  G3: Genes, Genomes, Genetics. 3(5), 917–926.'
  mla: 'Gazy, Inbal, et al. “A Genetic Screen for High Copy Number Suppressors of
    the Synthetic Lethality between Elg1Δ and Srs2Δ in Yeast.” <i> G3: Genes, Genomes,
    Genetics</i>, vol. 3, no. 5, Oxford University Press, 2013, pp. 917–26, doi:<a
    href="https://doi.org/10.1534/g3.113.005561">10.1534/g3.113.005561</a>.'
  short: 'I. Gazy, B. Liefshitz, A.M. Bronstein, O. Parnas, N. Atias, R. Sharan, M.
    Kupiec,  G3: Genes, Genomes, Genetics 3 (2013) 917–926.'
date_created: 2024-10-15T11:20:55Z
date_published: 2013-05-01T00:00:00Z
date_updated: 2024-12-18T15:30:20Z
day: '01'
doi: 10.1534/g3.113.005561
extern: '1'
fulldoi: https://doi.org/10.1534/g3.113.005561
intvolume: '         3'
issue: '5'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1534/g3.113.005561
month: '05'
oa: 1
oa_version: Published Version
page: 917-926
publication: ' G3: Genes, Genomes, Genetics'
publication_identifier:
  eissn:
  - 2160-1836
publication_status: published
publisher: Oxford University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: A genetic screen for high copy number suppressors of the synthetic lethality
  between elg1Δ and srs2Δ in yeast
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 3
year: '2013'
...
---
_id: '18440'
abstract:
- lang: eng
  text: In this paper, we explore the use of the diffusion geometry framework for
    the fusion of geometric and photometric information in local and global shape
    descriptors. Our construction is based on the definition of a diffusion process
    on the shape manifold embedded into a high-dimensional space where the embedding
    coordinates represent the photometric information. Experimental results show that
    such data fusion is useful in coping with different challenges of shape analysis
    where pure geometric and pure photometric methods fail.
article_processing_charge: No
author:
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: Artiom
  full_name: Kovnatsky, Artiom
  last_name: Kovnatsky
- first_name: Dan
  full_name: Raviv, Dan
  last_name: Raviv
- first_name: Michael M.
  full_name: Bronstein, Michael M.
  last_name: Bronstein
- first_name: Ron
  full_name: Kimmel, Ron
  last_name: Kimmel
citation:
  ama: 'Bronstein AM, Kovnatsky A, Raviv D, Bronstein MM, Kimmel R. Geometric and
    photometric data fusion in non-rigid shape analysis. <i>Numerical Mathematics:
    Theory, Methods and Applications</i>. 2013;6(1):199-222. doi:<a href="https://doi.org/10.4208/nmtma.2013.mssvm11">10.4208/nmtma.2013.mssvm11</a>'
  apa: 'Bronstein, A. M., Kovnatsky, A., Raviv, D., Bronstein, M. M., &#38; Kimmel,
    R. (2013). Geometric and photometric data fusion in non-rigid shape analysis.
    <i>Numerical Mathematics: Theory, Methods and Applications</i>. Global Science
    Press. <a href="https://doi.org/10.4208/nmtma.2013.mssvm11">https://doi.org/10.4208/nmtma.2013.mssvm11</a>'
  chicago: 'Bronstein, Alex M., Artiom Kovnatsky, Dan Raviv, Michael M. Bronstein,
    and Ron Kimmel. “Geometric and Photometric Data Fusion in Non-Rigid Shape Analysis.”
    <i>Numerical Mathematics: Theory, Methods and Applications</i>. Global Science
    Press, 2013. <a href="https://doi.org/10.4208/nmtma.2013.mssvm11">https://doi.org/10.4208/nmtma.2013.mssvm11</a>.'
  ieee: 'A. M. Bronstein, A. Kovnatsky, D. Raviv, M. M. Bronstein, and R. Kimmel,
    “Geometric and photometric data fusion in non-rigid shape analysis,” <i>Numerical
    Mathematics: Theory, Methods and Applications</i>, vol. 6, no. 1. Global Science
    Press, pp. 199–222, 2013.'
  ista: 'Bronstein AM, Kovnatsky A, Raviv D, Bronstein MM, Kimmel R. 2013. Geometric
    and photometric data fusion in non-rigid shape analysis. Numerical Mathematics:
    Theory, Methods and Applications. 6(1), 199–222.'
  mla: 'Bronstein, Alex M., et al. “Geometric and Photometric Data Fusion in Non-Rigid
    Shape Analysis.” <i>Numerical Mathematics: Theory, Methods and Applications</i>,
    vol. 6, no. 1, Global Science Press, 2013, pp. 199–222, doi:<a href="https://doi.org/10.4208/nmtma.2013.mssvm11">10.4208/nmtma.2013.mssvm11</a>.'
  short: 'A.M. Bronstein, A. Kovnatsky, D. Raviv, M.M. Bronstein, R. Kimmel, Numerical
    Mathematics: Theory, Methods and Applications 6 (2013) 199–222.'
date_created: 2024-10-15T11:20:55Z
date_published: 2013-02-01T00:00:00Z
date_updated: 2024-12-19T15:09:21Z
day: '01'
doi: 10.4208/nmtma.2013.mssvm11
extern: '1'
fulldoi: https://doi.org/10.4208/nmtma.2013.mssvm11
intvolume: '         6'
issue: '1'
language:
- iso: eng
month: '02'
oa_version: None
page: 199-222
publication: 'Numerical Mathematics: Theory, Methods and Applications'
publication_identifier:
  eissn:
  - 2079-7338
  issn:
  - 1004-8979
publication_status: published
publisher: Global Science Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Geometric and photometric data fusion in non-rigid shape analysis
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 6
year: '2013'
...
---
_id: '18441'
abstract:
- lang: eng
  text: Partial similarity of shapes is a challenging problem arising in many important
    applications in computer vision, shape analysis, and graphics, e.g. when one has
    to deal with partial information and acquisition artifacts. The problem is especially
    hard when the underlying shapes are non-rigid and are given up to a deformation.
    Partial matching is usually approached by computing local descriptors on a pair
    of shapes and then establishing a point-wise non-bijective correspondence between
    the two, taking into account possibly different parts. In this paper, we introduce
    an alternative correspondence-less approach to matching fragments to an entire
    shape undergoing a non-rigid deformation. We use region-wise local descriptors
    and optimize over the integration domains on which the integral descriptors of
    the two parts match. The problem is regularized using the Mumford-Shah functional.
    We show an efficient discretization based on the Ambrosio-Tortorelli approximation
    generalized to triangular point clouds and meshes, and present experiments demonstrating
    the success of the proposed method.
article_processing_charge: No
author:
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: 'Jonathan '
  full_name: 'Pokrass, Jonathan '
  last_name: Pokrass
- first_name: Michael M.
  full_name: Bronstein, Michael M.
  last_name: Bronstein
citation:
  ama: 'Bronstein AM, Pokrass J, Bronstein MM. Partial shape matching without point-wise
    correspondence. <i>Numerical Mathematics: Theory, Methods and Applications</i>.
    2013;6(1):223-244. doi:<a href="https://doi.org/10.4208/nmtma.2013.mssvm12">10.4208/nmtma.2013.mssvm12</a>'
  apa: 'Bronstein, A. M., Pokrass, J., &#38; Bronstein, M. M. (2013). Partial shape
    matching without point-wise correspondence. <i>Numerical Mathematics: Theory,
    Methods and Applications</i>. Global Science Press. <a href="https://doi.org/10.4208/nmtma.2013.mssvm12">https://doi.org/10.4208/nmtma.2013.mssvm12</a>'
  chicago: 'Bronstein, Alex M., Jonathan  Pokrass, and Michael M. Bronstein. “Partial
    Shape Matching without Point-Wise Correspondence.” <i>Numerical Mathematics: Theory,
    Methods and Applications</i>. Global Science Press, 2013. <a href="https://doi.org/10.4208/nmtma.2013.mssvm12">https://doi.org/10.4208/nmtma.2013.mssvm12</a>.'
  ieee: 'A. M. Bronstein, J. Pokrass, and M. M. Bronstein, “Partial shape matching
    without point-wise correspondence,” <i>Numerical Mathematics: Theory, Methods
    and Applications</i>, vol. 6, no. 1. Global Science Press, pp. 223–244, 2013.'
  ista: 'Bronstein AM, Pokrass J, Bronstein MM. 2013. Partial shape matching without
    point-wise correspondence. Numerical Mathematics: Theory, Methods and Applications.
    6(1), 223–244.'
  mla: 'Bronstein, Alex M., et al. “Partial Shape Matching without Point-Wise Correspondence.”
    <i>Numerical Mathematics: Theory, Methods and Applications</i>, vol. 6, no. 1,
    Global Science Press, 2013, pp. 223–44, doi:<a href="https://doi.org/10.4208/nmtma.2013.mssvm12">10.4208/nmtma.2013.mssvm12</a>.'
  short: 'A.M. Bronstein, J. Pokrass, M.M. Bronstein, Numerical Mathematics: Theory,
    Methods and Applications 6 (2013) 223–244.'
date_created: 2024-10-15T11:20:55Z
date_published: 2013-02-01T00:00:00Z
date_updated: 2024-12-19T14:44:37Z
day: '01'
doi: 10.4208/nmtma.2013.mssvm12
extern: '1'
fulldoi: https://doi.org/10.4208/nmtma.2013.mssvm12
intvolume: '         6'
issue: '1'
language:
- iso: eng
month: '02'
oa_version: None
page: 223-244
publication: 'Numerical Mathematics: Theory, Methods and Applications'
publication_identifier:
  eissn:
  - 2079-7338
  issn:
  - 1004-8979
publication_status: published
publisher: Global Science Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Partial shape matching without point-wise correspondence
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 6
year: '2013'
...
---
OA_place: repository
OA_type: green
_id: '22053'
abstract:
- lang: eng
  text: We consider the Gross–Pitaevskii equation on R^4 and the cubic-quintic nonlinear
    Schrödinger equation (NLS) on R^3 with non-vanishing boundary conditions at spatial
    infinity. By viewing these equations as perturbations to the energy-critical NLS,
    we prove that they are globally well-posed in their energy spaces. In particular,
    we prove unconditional uniqueness in the energy spaces for these equations.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Rowan
  full_name: Killip, Rowan
  last_name: Killip
- first_name: Tadahiro
  full_name: Oh, Tadahiro
  last_name: Oh
- first_name: Oana
  full_name: Pocovnicu, Oana
  last_name: Pocovnicu
- first_name: Monica
  full_name: Visan, Monica
  id: 056daca0-b8d1-11f0-964f-f91054abf8ca
  last_name: Visan
citation:
  ama: Killip R, Oh T, Pocovnicu O, Vişan M. Global well-posedness of the Gross–Pitaevskii
    and cubic-quintic nonlinear Schrödinger equations with non-vanishing boundary
    conditions. <i>Mathematical Research Letters</i>. 2013;19(5):969-986. doi:<a href="https://doi.org/10.4310/mrl.2012.v19.n5.a1">10.4310/mrl.2012.v19.n5.a1</a>
  apa: Killip, R., Oh, T., Pocovnicu, O., &#38; Vişan, M. (2013). Global well-posedness
    of the Gross–Pitaevskii and cubic-quintic nonlinear Schrödinger equations with
    non-vanishing boundary conditions. <i>Mathematical Research Letters</i>. International
    Press of Boston. <a href="https://doi.org/10.4310/mrl.2012.v19.n5.a1">https://doi.org/10.4310/mrl.2012.v19.n5.a1</a>
  chicago: Killip, Rowan, Tadahiro Oh, Oana Pocovnicu, and Monica Vişan. “Global Well-Posedness
    of the Gross–Pitaevskii and Cubic-Quintic Nonlinear Schrödinger Equations with
    Non-Vanishing Boundary Conditions.” <i>Mathematical Research Letters</i>. International
    Press of Boston, 2013. <a href="https://doi.org/10.4310/mrl.2012.v19.n5.a1">https://doi.org/10.4310/mrl.2012.v19.n5.a1</a>.
  ieee: R. Killip, T. Oh, O. Pocovnicu, and M. Vişan, “Global well-posedness of the
    Gross–Pitaevskii and cubic-quintic nonlinear Schrödinger equations with non-vanishing
    boundary conditions,” <i>Mathematical Research Letters</i>, vol. 19, no. 5. International
    Press of Boston, pp. 969–986, 2013.
  ista: Killip R, Oh T, Pocovnicu O, Vişan M. 2013. Global well-posedness of the Gross–Pitaevskii
    and cubic-quintic nonlinear Schrödinger equations with non-vanishing boundary
    conditions. Mathematical Research Letters. 19(5), 969–986.
  mla: Killip, Rowan, et al. “Global Well-Posedness of the Gross–Pitaevskii and Cubic-Quintic
    Nonlinear Schrödinger Equations with Non-Vanishing Boundary Conditions.” <i>Mathematical
    Research Letters</i>, vol. 19, no. 5, International Press of Boston, 2013, pp.
    969–86, doi:<a href="https://doi.org/10.4310/mrl.2012.v19.n5.a1">10.4310/mrl.2012.v19.n5.a1</a>.
  short: R. Killip, T. Oh, O. Pocovnicu, M. Vişan, Mathematical Research Letters 19
    (2013) 969–986.
das_tickbox: '1'
date_created: 2026-06-19T07:54:49Z
date_published: 2013-03-15T00:00:00Z
date_updated: 2026-06-25T08:33:18Z
day: '15'
doi: 10.4310/mrl.2012.v19.n5.a1
extern: '1'
external_id:
  arxiv:
  - '1112.1354'
fulldoi: https://doi.org/10.4310/mrl.2012.v19.n5.a1
intvolume: '        19'
issue: '5'
keyword:
- NLS
- Gross–Pitaevskii equation
- non-vanishing boundary condition
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1112.1354
mathsc:
- 35Q55
month: '03'
oa: 1
oa_version: Preprint
page: 969-986
publication: Mathematical Research Letters
publication_identifier:
  eissn:
  - 1945-001X
  issn:
  - 1073-2780
publication_status: published
publisher: International Press of Boston
quality_controlled: '1'
scopus_import: '1'
status: public
title: Global well-posedness of the Gross–Pitaevskii and cubic-quintic nonlinear Schrödinger
  equations with non-vanishing boundary conditions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 19
year: '2013'
...
