---
OA_type: closed access
_id: '18012'
abstract:
- lang: eng
  text: We report the first concurrent determination of conductance (G) and thermopower
    (S) of single-molecule junctions via direct measurement of electrical and thermoelectric
    currents using a scanning tunneling microscope-based break-junction technique.
    We explore several amine-Au and pyridine-Au linked molecules that are predicted
    to conduct through either the highest occupied molecular orbital (HOMO) or the
    lowest unoccupied molecular orbital (LUMO), respectively. We find that the Seebeck
    coefficient is negative for pyridine-Au linked LUMO-conducting junctions and positive
    for amine-Au linked HOMO-conducting junctions. Within the accessible temperature
    gradients (<30 K), we do not observe a strong dependence of the junction Seebeck
    coefficient on temperature. From histograms of thousands of junctions, we use
    the most probable Seebeck coefficient to determine a power factor, GS2, for each
    junction studied, and find that GS2 increases with G. Finally, we find that conductance
    and Seebeck coefficient values are in good quantitative agreement with our self-energy
    corrected density functional theory calculations.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Jonathan R.
  full_name: Widawsky, Jonathan R.
  last_name: Widawsky
- first_name: Pierre
  full_name: Darancet, Pierre
  last_name: Darancet
- first_name: Jeffrey B.
  full_name: Neaton, Jeffrey B.
  last_name: Neaton
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
citation:
  ama: Widawsky JR, Darancet P, Neaton JB, Venkataraman L. Simultaneous determination
    of conductance and thermopower of single molecule junctions. <i>Nano Letters</i>.
    2011;12(1):354-358. doi:<a href="https://doi.org/10.1021/nl203634m">10.1021/nl203634m</a>
  apa: Widawsky, J. R., Darancet, P., Neaton, J. B., &#38; Venkataraman, L. (2011).
    Simultaneous determination of conductance and thermopower of single molecule junctions.
    <i>Nano Letters</i>. American Chemical Society. <a href="https://doi.org/10.1021/nl203634m">https://doi.org/10.1021/nl203634m</a>
  chicago: Widawsky, Jonathan R., Pierre Darancet, Jeffrey B. Neaton, and Latha Venkataraman.
    “Simultaneous Determination of Conductance and Thermopower of Single Molecule
    Junctions.” <i>Nano Letters</i>. American Chemical Society, 2011. <a href="https://doi.org/10.1021/nl203634m">https://doi.org/10.1021/nl203634m</a>.
  ieee: J. R. Widawsky, P. Darancet, J. B. Neaton, and L. Venkataraman, “Simultaneous
    determination of conductance and thermopower of single molecule junctions,” <i>Nano
    Letters</i>, vol. 12, no. 1. American Chemical Society, pp. 354–358, 2011.
  ista: Widawsky JR, Darancet P, Neaton JB, Venkataraman L. 2011. Simultaneous determination
    of conductance and thermopower of single molecule junctions. Nano Letters. 12(1),
    354–358.
  mla: Widawsky, Jonathan R., et al. “Simultaneous Determination of Conductance and
    Thermopower of Single Molecule Junctions.” <i>Nano Letters</i>, vol. 12, no. 1,
    American Chemical Society, 2011, pp. 354–58, doi:<a href="https://doi.org/10.1021/nl203634m">10.1021/nl203634m</a>.
  short: J.R. Widawsky, P. Darancet, J.B. Neaton, L. Venkataraman, Nano Letters 12
    (2011) 354–358.
date_created: 2024-09-09T12:32:14Z
date_published: 2011-11-30T00:00:00Z
date_updated: 2025-01-03T09:26:26Z
day: '30'
doi: 10.1021/nl203634m
extern: '1'
external_id:
  pmid:
  - '22128800'
intvolume: '        12'
issue: '1'
language:
- iso: eng
month: '11'
oa_version: None
page: 354-358
pmid: 1
publication: Nano Letters
publication_identifier:
  eissn:
  - 1530-6992
  issn:
  - 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Simultaneous determination of conductance and thermopower of single molecule
  junctions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 12
year: '2011'
...
---
OA_place: repository
OA_type: green
_id: '18014'
abstract:
- lang: eng
  text: We measure electronic conductance through single conjugated molecules bonded
    to Au metal electrodes with direct Au–C covalent bonds using the scanning tunneling
    microscope based break-junction technique. We start with molecules terminated
    with trimethyltin end groups that cleave off in situ, resulting in formation of
    a direct covalent σ bond between the carbon backbone and the gold metal electrodes.
    The molecular carbon backbone used in this study consist of a conjugated π system
    that has one terminal methylene group on each end, which bonds to the electrodes,
    achieving large electronic coupling of the electrodes to the π system. The junctions
    formed with the prototypical example of 1,4-dimethylenebenzene show a conductance
    approaching one conductance quantum (G0 = 2e2/h). Junctions formed with methylene-terminated
    oligophenyls with two to four phenyl units show a 100-fold increase in conductance
    compared with junctions formed with amine-linked oligophenyls. The conduction
    mechanism for these longer oligophenyls is tunneling, as they exhibit an exponential
    dependence of conductance on oligomer length. In addition, density functional
    theory based calculations for the Au–xylylene–Au junction show near-resonant transmission,
    with a crossover to tunneling for the longer oligomers.
article_processing_charge: No
article_type: letter_note
arxiv: 1
author:
- first_name: Wenbo
  full_name: Chen, Wenbo
  last_name: Chen
- first_name: Jonathan R.
  full_name: Widawsky, Jonathan R.
  last_name: Widawsky
- first_name: Héctor
  full_name: Vázquez, Héctor
  last_name: Vázquez
- first_name: Severin T.
  full_name: Schneebeli, Severin T.
  last_name: Schneebeli
- first_name: Mark S.
  full_name: Hybertsen, Mark S.
  last_name: Hybertsen
- first_name: Ronald
  full_name: Breslow, Ronald
  last_name: Breslow
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
citation:
  ama: Chen W, Widawsky JR, Vázquez H, et al. Highly conducting π-conjugated molecular
    junctions covalently bonded to gold electrodes. <i>Journal of the American Chemical
    Society</i>. 2011;133(43):17160-17163. doi:<a href="https://doi.org/10.1021/ja208020j">10.1021/ja208020j</a>
  apa: Chen, W., Widawsky, J. R., Vázquez, H., Schneebeli, S. T., Hybertsen, M. S.,
    Breslow, R., &#38; Venkataraman, L. (2011). Highly conducting π-conjugated molecular
    junctions covalently bonded to gold electrodes. <i>Journal of the American Chemical
    Society</i>. American Chemical Society. <a href="https://doi.org/10.1021/ja208020j">https://doi.org/10.1021/ja208020j</a>
  chicago: Chen, Wenbo, Jonathan R. Widawsky, Héctor Vázquez, Severin T. Schneebeli,
    Mark S. Hybertsen, Ronald Breslow, and Latha Venkataraman. “Highly Conducting
    π-Conjugated Molecular Junctions Covalently Bonded to Gold Electrodes.” <i>Journal
    of the American Chemical Society</i>. American Chemical Society, 2011. <a href="https://doi.org/10.1021/ja208020j">https://doi.org/10.1021/ja208020j</a>.
  ieee: W. Chen <i>et al.</i>, “Highly conducting π-conjugated molecular junctions
    covalently bonded to gold electrodes,” <i>Journal of the American Chemical Society</i>,
    vol. 133, no. 43. American Chemical Society, pp. 17160–17163, 2011.
  ista: Chen W, Widawsky JR, Vázquez H, Schneebeli ST, Hybertsen MS, Breslow R, Venkataraman
    L. 2011. Highly conducting π-conjugated molecular junctions covalently bonded
    to gold electrodes. Journal of the American Chemical Society. 133(43), 17160–17163.
  mla: Chen, Wenbo, et al. “Highly Conducting π-Conjugated Molecular Junctions Covalently
    Bonded to Gold Electrodes.” <i>Journal of the American Chemical Society</i>, vol.
    133, no. 43, American Chemical Society, 2011, pp. 17160–63, doi:<a href="https://doi.org/10.1021/ja208020j">10.1021/ja208020j</a>.
  short: W. Chen, J.R. Widawsky, H. Vázquez, S.T. Schneebeli, M.S. Hybertsen, R. Breslow,
    L. Venkataraman, Journal of the American Chemical Society 133 (2011) 17160–17163.
date_created: 2024-09-09T12:33:46Z
date_published: 2011-09-22T00:00:00Z
date_updated: 2025-01-03T09:34:24Z
day: '22'
doi: 10.1021/ja208020j
extern: '1'
external_id:
  arxiv:
  - '1110.0344'
  pmid:
  - '21939263'
intvolume: '       133'
issue: '43'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/1110.0344
month: '09'
oa: 1
oa_version: Preprint
page: 17160-17163
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Highly conducting π-conjugated molecular junctions covalently bonded to gold
  electrodes
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 133
year: '2011'
...
---
OA_type: closed access
_id: '18015'
abstract:
- lang: eng
  text: We investigate the binding and energy level alignment of 2,3,5,6-tetramethyl-1,4-benzenediamine
    (TMBDA) on Au(111) through a combination of helium atom scattering (HAS), X-ray
    photoemission (XPS), and scanning tunneling microscopy (STM). We show that TMBDA
    binds to step edges and to flat Au (111) terraces in a nearly flat-lying configuration.
    Through combination of HAS and STM data, we determine that the molecules are bound
    on step edges with an adsorption energy of about 1.2 eV, which is about 0.2 eV
    stronger than the adsorption energy we measure on flat surface. Preferential bonding
    to the under-coordinated Au atoms on step edges suggests that the molecules bind
    to Au through the nitrogen lone pair. Finally, STM measurements on TMBDA in these
    two different adsorption configurations show that the highest-occupied molecular
    orbital is deeper relative to Fermi for the more strongly bound molecules on step
    edges, confirming that the nitrogen bonds through charge donation to the Au.
article_processing_charge: No
article_type: original
author:
- first_name: M.
  full_name: Kamenetska, M.
  last_name: Kamenetska
- first_name: M.
  full_name: Dell’Angela, M.
  last_name: Dell’Angela
- first_name: J.R.
  full_name: Widawsky, J.R.
  last_name: Widawsky
- first_name: G.
  full_name: Kladnik, G.
  last_name: Kladnik
- first_name: A.
  full_name: Verdini, A.
  last_name: Verdini
- first_name: A.
  full_name: Cossaro, A.
  last_name: Cossaro
- first_name: D.
  full_name: Cvetko, D.
  last_name: Cvetko
- first_name: A.
  full_name: Morgante, A.
  last_name: Morgante
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
citation:
  ama: Kamenetska M, Dell’Angela M, Widawsky JR, et al. Structure and energy level
    alignment of tetramethyl benzenediamine on Au(111). <i>The Journal of Physical
    Chemistry C</i>. 2011;115(25):12625-12630. doi:<a href="https://doi.org/10.1021/jp202555d">10.1021/jp202555d</a>
  apa: Kamenetska, M., Dell’Angela, M., Widawsky, J. R., Kladnik, G., Verdini, A.,
    Cossaro, A., … Venkataraman, L. (2011). Structure and energy level alignment of
    tetramethyl benzenediamine on Au(111). <i>The Journal of Physical Chemistry C</i>.
    American Chemical Society. <a href="https://doi.org/10.1021/jp202555d">https://doi.org/10.1021/jp202555d</a>
  chicago: Kamenetska, M., M. Dell’Angela, J.R. Widawsky, G. Kladnik, A. Verdini,
    A. Cossaro, D. Cvetko, A. Morgante, and Latha Venkataraman. “Structure and Energy
    Level Alignment of Tetramethyl Benzenediamine on Au(111).” <i>The Journal of Physical
    Chemistry C</i>. American Chemical Society, 2011. <a href="https://doi.org/10.1021/jp202555d">https://doi.org/10.1021/jp202555d</a>.
  ieee: M. Kamenetska <i>et al.</i>, “Structure and energy level alignment of tetramethyl
    benzenediamine on Au(111),” <i>The Journal of Physical Chemistry C</i>, vol. 115,
    no. 25. American Chemical Society, pp. 12625–12630, 2011.
  ista: Kamenetska M, Dell’Angela M, Widawsky JR, Kladnik G, Verdini A, Cossaro A,
    Cvetko D, Morgante A, Venkataraman L. 2011. Structure and energy level alignment
    of tetramethyl benzenediamine on Au(111). The Journal of Physical Chemistry C.
    115(25), 12625–12630.
  mla: Kamenetska, M., et al. “Structure and Energy Level Alignment of Tetramethyl
    Benzenediamine on Au(111).” <i>The Journal of Physical Chemistry C</i>, vol. 115,
    no. 25, American Chemical Society, 2011, pp. 12625–30, doi:<a href="https://doi.org/10.1021/jp202555d">10.1021/jp202555d</a>.
  short: M. Kamenetska, M. Dell’Angela, J.R. Widawsky, G. Kladnik, A. Verdini, A.
    Cossaro, D. Cvetko, A. Morgante, L. Venkataraman, The Journal of Physical Chemistry
    C 115 (2011) 12625–12630.
date_created: 2024-09-09T12:34:26Z
date_published: 2011-05-17T00:00:00Z
date_updated: 2025-01-03T09:36:40Z
day: '17'
doi: 10.1021/jp202555d
extern: '1'
intvolume: '       115'
issue: '25'
language:
- iso: eng
month: '05'
oa_version: None
page: 12625-12630
publication: The Journal of Physical Chemistry C
publication_identifier:
  eissn:
  - 1932-7455
  issn:
  - 1932-7447
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Structure and energy level alignment of tetramethyl benzenediamine on Au(111)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 115
year: '2011'
...
---
OA_type: closed access
_id: '18016'
abstract:
- lang: eng
  text: Understanding the electrical properties of semiconducting quantum dot devices
    have been limited due to the variability of their size/composition and the chemistry
    of ligand/electrode binding. Furthermore, to probe their electrical conduction
    properties and its dependence on ligand/electrode binding, measurements must be
    carried out at the single dot/cluster level. Herein we report scanning tunneling
    microscope based break junction measurements of cobalt chalcogenide clusters with
    Te, Se and S to probe the conductance properties. Our measured conductance trends
    show that the Co–Te based clusters have the highest conductance while the Co-S
    clusters the lowest. These trends are in very good agreement with cyclic voltammetry
    measurements of the first oxidation potentials and with density functional theory
    calculations of their HOMO–LUMO gaps.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Brycelyn M.
  full_name: Boardman, Brycelyn M.
  last_name: Boardman
- first_name: Jonathan R.
  full_name: Widawsky, Jonathan R.
  last_name: Widawsky
- first_name: Young S.
  full_name: Park, Young S.
  last_name: Park
- first_name: Christine L.
  full_name: Schenck, Christine L.
  last_name: Schenck
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
- first_name: Michael L.
  full_name: Steigerwald, Michael L.
  last_name: Steigerwald
- first_name: Colin
  full_name: Nuckolls, Colin
  last_name: Nuckolls
citation:
  ama: Boardman BM, Widawsky JR, Park YS, et al. Conductance of single cobalt chalcogenide
    cluster junctions. <i>Journal of the American Chemical Society</i>. 2011;133(22):8455-8457.
    doi:<a href="https://doi.org/10.1021/ja201334s">10.1021/ja201334s</a>
  apa: Boardman, B. M., Widawsky, J. R., Park, Y. S., Schenck, C. L., Venkataraman,
    L., Steigerwald, M. L., &#38; Nuckolls, C. (2011). Conductance of single cobalt
    chalcogenide cluster junctions. <i>Journal of the American Chemical Society</i>.
    American Chemical Society. <a href="https://doi.org/10.1021/ja201334s">https://doi.org/10.1021/ja201334s</a>
  chicago: Boardman, Brycelyn M., Jonathan R. Widawsky, Young S. Park, Christine L.
    Schenck, Latha Venkataraman, Michael L. Steigerwald, and Colin Nuckolls. “Conductance
    of Single Cobalt Chalcogenide Cluster Junctions.” <i>Journal of the American Chemical
    Society</i>. American Chemical Society, 2011. <a href="https://doi.org/10.1021/ja201334s">https://doi.org/10.1021/ja201334s</a>.
  ieee: B. M. Boardman <i>et al.</i>, “Conductance of single cobalt chalcogenide cluster
    junctions,” <i>Journal of the American Chemical Society</i>, vol. 133, no. 22.
    American Chemical Society, pp. 8455–8457, 2011.
  ista: Boardman BM, Widawsky JR, Park YS, Schenck CL, Venkataraman L, Steigerwald
    ML, Nuckolls C. 2011. Conductance of single cobalt chalcogenide cluster junctions.
    Journal of the American Chemical Society. 133(22), 8455–8457.
  mla: Boardman, Brycelyn M., et al. “Conductance of Single Cobalt Chalcogenide Cluster
    Junctions.” <i>Journal of the American Chemical Society</i>, vol. 133, no. 22,
    American Chemical Society, 2011, pp. 8455–57, doi:<a href="https://doi.org/10.1021/ja201334s">10.1021/ja201334s</a>.
  short: B.M. Boardman, J.R. Widawsky, Y.S. Park, C.L. Schenck, L. Venkataraman, M.L.
    Steigerwald, C. Nuckolls, Journal of the American Chemical Society 133 (2011)
    8455–8457.
date_created: 2024-09-09T12:35:04Z
date_published: 2011-05-03T00:00:00Z
date_updated: 2025-01-03T09:38:32Z
day: '03'
doi: 10.1021/ja201334s
extern: '1'
external_id:
  pmid:
  - '21539375'
intvolume: '       133'
issue: '22'
language:
- iso: eng
month: '05'
oa_version: None
page: 8455-8457
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Conductance of single cobalt chalcogenide cluster junctions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 133
year: '2011'
...
---
OA_type: closed access
_id: '18017'
abstract:
- lang: eng
  text: The conductance of individual 1,4-benzenediamine (BDA)–Au molecular junctions
    is measured in different solvent environments using a scanning tunneling microscope
    based point-contact technique. Solvents are found to increase the conductance
    of these molecular junctions by as much as 50%. Using first principles calculations,
    we explain this increase by showing that a shift in the Au contact work function
    is induced by solvents binding to undercoordinated Au sites around the junction.
    Increasing the Au contact work function reduces the separation between the Au
    Fermi energy and the highest occupied molecular orbital of BDA in the junction,
    increasing the measured conductance. We demonstrate that the solvent-induced shift
    in conductance depends on the affinity of the solvent to Au binding sites and
    also on the induced dipole (relative to BDA) upon adsorption. Via this mechanism,
    molecular junction level alignment and transport properties can be statistically
    altered by solvent molecule binding to the contact surface.
article_processing_charge: No
article_type: letter_note
author:
- first_name: V.
  full_name: Fatemi, V.
  last_name: Fatemi
- first_name: M.
  full_name: Kamenetska, M.
  last_name: Kamenetska
- first_name: J. B.
  full_name: Neaton, J. B.
  last_name: Neaton
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
citation:
  ama: Fatemi V, Kamenetska M, Neaton JB, Venkataraman L. Environmental control of
    single-molecule junction transport. <i>Nano Letters</i>. 2011;11(5):1988-1992.
    doi:<a href="https://doi.org/10.1021/nl200324e">10.1021/nl200324e</a>
  apa: Fatemi, V., Kamenetska, M., Neaton, J. B., &#38; Venkataraman, L. (2011). Environmental
    control of single-molecule junction transport. <i>Nano Letters</i>. American Chemical
    Society. <a href="https://doi.org/10.1021/nl200324e">https://doi.org/10.1021/nl200324e</a>
  chicago: Fatemi, V., M. Kamenetska, J. B. Neaton, and Latha Venkataraman. “Environmental
    Control of Single-Molecule Junction Transport.” <i>Nano Letters</i>. American
    Chemical Society, 2011. <a href="https://doi.org/10.1021/nl200324e">https://doi.org/10.1021/nl200324e</a>.
  ieee: V. Fatemi, M. Kamenetska, J. B. Neaton, and L. Venkataraman, “Environmental
    control of single-molecule junction transport,” <i>Nano Letters</i>, vol. 11,
    no. 5. American Chemical Society, pp. 1988–1992, 2011.
  ista: Fatemi V, Kamenetska M, Neaton JB, Venkataraman L. 2011. Environmental control
    of single-molecule junction transport. Nano Letters. 11(5), 1988–1992.
  mla: Fatemi, V., et al. “Environmental Control of Single-Molecule Junction Transport.”
    <i>Nano Letters</i>, vol. 11, no. 5, American Chemical Society, 2011, pp. 1988–92,
    doi:<a href="https://doi.org/10.1021/nl200324e">10.1021/nl200324e</a>.
  short: V. Fatemi, M. Kamenetska, J.B. Neaton, L. Venkataraman, Nano Letters 11 (2011)
    1988–1992.
date_created: 2024-09-09T12:35:47Z
date_published: 2011-04-18T00:00:00Z
date_updated: 2025-01-03T09:43:09Z
day: '18'
doi: 10.1021/nl200324e
extern: '1'
external_id:
  pmid:
  - '21500833'
intvolume: '        11'
issue: '5'
language:
- iso: eng
month: '04'
oa_version: None
page: 1988-1992
pmid: 1
publication: Nano Letters
publication_identifier:
  eissn:
  - 1530-6992
  issn:
  - 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Environmental control of single-molecule junction transport
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 11
year: '2011'
...
---
OA_type: closed access
_id: '18018'
abstract:
- lang: eng
  text: Controlling electron transport through a single-molecule device is key to
    the realization of nanoscale electronic components. A design requirement for single
    molecule electrical devices is that the molecule must be both structurally and
    electrically connected to the metallic electrodes. Typically, the mechanical and
    electrical contacts are achieved by the same chemical moiety. In this study, we
    demonstrate that the structural role may be played by one group (for example,
    a sulfide) while the electrical role may be played by another (a conjugated chain
    of C═C π-bonds). We can specify the electrical conductance through the molecule
    by modulating to which particular site on the oligoene chain the electrode binds.
    The result is a device that functions as a potentiometer at the single-molecule
    level.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Jeffrey S.
  full_name: Meisner, Jeffrey S.
  last_name: Meisner
- first_name: Masha
  full_name: Kamenetska, Masha
  last_name: Kamenetska
- first_name: Markrete
  full_name: Krikorian, Markrete
  last_name: Krikorian
- first_name: Michael L.
  full_name: Steigerwald, Michael L.
  last_name: Steigerwald
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
- first_name: Colin
  full_name: Nuckolls, Colin
  last_name: Nuckolls
citation:
  ama: Meisner JS, Kamenetska M, Krikorian M, Steigerwald ML, Venkataraman L, Nuckolls
    C. A single-molecule potentiometer. <i>Nano Letters</i>. 2011;11(4):1575-1579.
    doi:<a href="https://doi.org/10.1021/nl104411f">10.1021/nl104411f</a>
  apa: Meisner, J. S., Kamenetska, M., Krikorian, M., Steigerwald, M. L., Venkataraman,
    L., &#38; Nuckolls, C. (2011). A single-molecule potentiometer. <i>Nano Letters</i>.
    American Chemical Society. <a href="https://doi.org/10.1021/nl104411f">https://doi.org/10.1021/nl104411f</a>
  chicago: Meisner, Jeffrey S., Masha Kamenetska, Markrete Krikorian, Michael L. Steigerwald,
    Latha Venkataraman, and Colin Nuckolls. “A Single-Molecule Potentiometer.” <i>Nano
    Letters</i>. American Chemical Society, 2011. <a href="https://doi.org/10.1021/nl104411f">https://doi.org/10.1021/nl104411f</a>.
  ieee: J. S. Meisner, M. Kamenetska, M. Krikorian, M. L. Steigerwald, L. Venkataraman,
    and C. Nuckolls, “A single-molecule potentiometer,” <i>Nano Letters</i>, vol.
    11, no. 4. American Chemical Society, pp. 1575–1579, 2011.
  ista: Meisner JS, Kamenetska M, Krikorian M, Steigerwald ML, Venkataraman L, Nuckolls
    C. 2011. A single-molecule potentiometer. Nano Letters. 11(4), 1575–1579.
  mla: Meisner, Jeffrey S., et al. “A Single-Molecule Potentiometer.” <i>Nano Letters</i>,
    vol. 11, no. 4, American Chemical Society, 2011, pp. 1575–79, doi:<a href="https://doi.org/10.1021/nl104411f">10.1021/nl104411f</a>.
  short: J.S. Meisner, M. Kamenetska, M. Krikorian, M.L. Steigerwald, L. Venkataraman,
    C. Nuckolls, Nano Letters 11 (2011) 1575–1579.
date_created: 2024-09-09T12:36:26Z
date_published: 2011-03-17T00:00:00Z
date_updated: 2025-01-03T09:45:24Z
day: '17'
doi: 10.1021/nl104411f
extern: '1'
external_id:
  pmid:
  - '21413779'
intvolume: '        11'
issue: '4'
language:
- iso: eng
month: '03'
oa_version: None
page: 1575-1579
pmid: 1
publication: Nano Letters
publication_identifier:
  eissn:
  - 1530-6992
  issn:
  - 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: A single-molecule potentiometer
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 11
year: '2011'
...
---
OA_type: closed access
_id: '18019'
abstract:
- lang: eng
  text: We simultaneously measure conductance and force across nanoscale junctions.
    A new, two-dimensional histogram technique is introduced to statistically extract
    bond rupture forces from a large data set of individual junction elongation traces.
    For the case of Au point contacts, we find a rupture force of 1.4 ± 0.2 nN, which
    is in good agreement with previous measurements. We then study systematic trends
    for single gold metal−molecule−metal junctions for a series of molecules terminated
    with amine and pyridine linkers. For all molecules studied, single molecule junctions
    rupture at the Au−N bond. Selective binding of the linker group allows us to correlate
    the N−Au bond-rupture force to the molecular backbone. We find that the rupture
    force ranges from 0.8 nN for 4,4′ bipyridine to 0.5 nN in 1,4 diaminobenzene.
    These experimental results are in excellent quantitative agreement with density
    functional theory based adiabatic molecular junction elongation and rupture calculations.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Michael
  full_name: Frei, Michael
  last_name: Frei
- first_name: Sriharsha V.
  full_name: Aradhya, Sriharsha V.
  last_name: Aradhya
- first_name: Max
  full_name: Koentopp, Max
  last_name: Koentopp
- first_name: Mark S.
  full_name: Hybertsen, Mark S.
  last_name: Hybertsen
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
citation:
  ama: 'Frei M, Aradhya SV, Koentopp M, Hybertsen MS, Venkataraman L. Mechanics and
    chemistry: Single molecule bond rupture forces correlate with molecular backbone
    structure. <i>Nano Letters</i>. 2011;11(4):1518-1523. doi:<a href="https://doi.org/10.1021/nl1042903">10.1021/nl1042903</a>'
  apa: 'Frei, M., Aradhya, S. V., Koentopp, M., Hybertsen, M. S., &#38; Venkataraman,
    L. (2011). Mechanics and chemistry: Single molecule bond rupture forces correlate
    with molecular backbone structure. <i>Nano Letters</i>. American Chemical Society.
    <a href="https://doi.org/10.1021/nl1042903">https://doi.org/10.1021/nl1042903</a>'
  chicago: 'Frei, Michael, Sriharsha V. Aradhya, Max Koentopp, Mark S. Hybertsen,
    and Latha Venkataraman. “Mechanics and Chemistry: Single Molecule Bond Rupture
    Forces Correlate with Molecular Backbone Structure.” <i>Nano Letters</i>. American
    Chemical Society, 2011. <a href="https://doi.org/10.1021/nl1042903">https://doi.org/10.1021/nl1042903</a>.'
  ieee: 'M. Frei, S. V. Aradhya, M. Koentopp, M. S. Hybertsen, and L. Venkataraman,
    “Mechanics and chemistry: Single molecule bond rupture forces correlate with molecular
    backbone structure,” <i>Nano Letters</i>, vol. 11, no. 4. American Chemical Society,
    pp. 1518–1523, 2011.'
  ista: 'Frei M, Aradhya SV, Koentopp M, Hybertsen MS, Venkataraman L. 2011. Mechanics
    and chemistry: Single molecule bond rupture forces correlate with molecular backbone
    structure. Nano Letters. 11(4), 1518–1523.'
  mla: 'Frei, Michael, et al. “Mechanics and Chemistry: Single Molecule Bond Rupture
    Forces Correlate with Molecular Backbone Structure.” <i>Nano Letters</i>, vol.
    11, no. 4, American Chemical Society, 2011, pp. 1518–23, doi:<a href="https://doi.org/10.1021/nl1042903">10.1021/nl1042903</a>.'
  short: M. Frei, S.V. Aradhya, M. Koentopp, M.S. Hybertsen, L. Venkataraman, Nano
    Letters 11 (2011) 1518–1523.
date_created: 2024-09-09T12:37:10Z
date_published: 2011-03-02T00:00:00Z
date_updated: 2025-01-03T09:47:07Z
day: '02'
doi: 10.1021/nl1042903
extern: '1'
external_id:
  pmid:
  - '21366230'
intvolume: '        11'
issue: '4'
language:
- iso: eng
month: '03'
oa_version: None
page: 1518-1523
pmid: 1
publication: Nano Letters
publication_identifier:
  eissn:
  - 1530-6992
  issn:
  - 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Mechanics and chemistry: Single molecule bond rupture forces correlate with
  molecular backbone structure'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 11
year: '2011'
...
---
OA_type: closed access
_id: '18020'
abstract:
- lang: eng
  text: Understanding electron transport across π−π-stacked systems will help to answer
    fundamental questions about biochemical redox processes and benefit the design
    of new materials and molecular devices. Herein we employed the STM break-junction
    technique to measure the single-molecule conductance of multiple π−π-stacked aromatic
    rings. We studied electron transport through up to four stacked benzene rings
    held together in an eclipsed fashion via a paracyclophane scaffold. We found that
    the strained hydrocarbons studied herein couple directly to gold electrodes during
    the measurements; hence, we did not require any heteroatom binding groups as electrical
    contacts. Density functional theory-based calculations suggest that the gold atoms
    of the electrodes bind to two neighboring carbon atoms of the outermost cyclophane
    benzene rings in η2 fashion. Our measurements show an exponential decay of the
    conductance with an increasing number of stacked benzene rings, indicating a nonresonant
    tunneling mechanism. Furthermore, STM tip−substrate displacement data provide
    additional evidence that the electrodes bind to the outermost benzene rings of
    the π−π-stacked molecular wires.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Severin T.
  full_name: Schneebeli, Severin T.
  last_name: Schneebeli
- first_name: Maria
  full_name: Kamenetska, Maria
  last_name: Kamenetska
- first_name: Zhanling
  full_name: Cheng, Zhanling
  last_name: Cheng
- first_name: Rachid
  full_name: Skouta, Rachid
  last_name: Skouta
- first_name: Richard A.
  full_name: Friesner, Richard A.
  last_name: Friesner
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
- first_name: Ronald
  full_name: Breslow, Ronald
  last_name: Breslow
citation:
  ama: Schneebeli ST, Kamenetska M, Cheng Z, et al. Single-molecule conductance through
    multiple π−π-stacked benzene rings determined with direct electrode-to-benzene
    ring connections. <i>Journal of the American Chemical Society</i>. 2011;133(7):2136-2139.
    doi:<a href="https://doi.org/10.1021/ja111320n">10.1021/ja111320n</a>
  apa: Schneebeli, S. T., Kamenetska, M., Cheng, Z., Skouta, R., Friesner, R. A.,
    Venkataraman, L., &#38; Breslow, R. (2011). Single-molecule conductance through
    multiple π−π-stacked benzene rings determined with direct electrode-to-benzene
    ring connections. <i>Journal of the American Chemical Society</i>. American Chemical
    Society. <a href="https://doi.org/10.1021/ja111320n">https://doi.org/10.1021/ja111320n</a>
  chicago: Schneebeli, Severin T., Maria Kamenetska, Zhanling Cheng, Rachid Skouta,
    Richard A. Friesner, Latha Venkataraman, and Ronald Breslow. “Single-Molecule
    Conductance through Multiple Π−π-Stacked Benzene Rings Determined with Direct
    Electrode-to-Benzene Ring Connections.” <i>Journal of the American Chemical Society</i>.
    American Chemical Society, 2011. <a href="https://doi.org/10.1021/ja111320n">https://doi.org/10.1021/ja111320n</a>.
  ieee: S. T. Schneebeli <i>et al.</i>, “Single-molecule conductance through multiple
    π−π-stacked benzene rings determined with direct electrode-to-benzene ring connections,”
    <i>Journal of the American Chemical Society</i>, vol. 133, no. 7. American Chemical
    Society, pp. 2136–2139, 2011.
  ista: Schneebeli ST, Kamenetska M, Cheng Z, Skouta R, Friesner RA, Venkataraman
    L, Breslow R. 2011. Single-molecule conductance through multiple π−π-stacked benzene
    rings determined with direct electrode-to-benzene ring connections. Journal of
    the American Chemical Society. 133(7), 2136–2139.
  mla: Schneebeli, Severin T., et al. “Single-Molecule Conductance through Multiple
    Π−π-Stacked Benzene Rings Determined with Direct Electrode-to-Benzene Ring Connections.”
    <i>Journal of the American Chemical Society</i>, vol. 133, no. 7, American Chemical
    Society, 2011, pp. 2136–39, doi:<a href="https://doi.org/10.1021/ja111320n">10.1021/ja111320n</a>.
  short: S.T. Schneebeli, M. Kamenetska, Z. Cheng, R. Skouta, R.A. Friesner, L. Venkataraman,
    R. Breslow, Journal of the American Chemical Society 133 (2011) 2136–2139.
date_created: 2024-09-09T12:57:08Z
date_published: 2011-01-25T00:00:00Z
date_updated: 2025-01-03T09:49:00Z
day: '25'
doi: 10.1021/ja111320n
extern: '1'
external_id:
  pmid:
  - '21265533'
intvolume: '       133'
issue: '7'
language:
- iso: eng
month: '01'
oa_version: None
page: 2136-2139
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
  eissn:
  - 1520-5126
  issn:
  - 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Single-molecule conductance through multiple π−π-stacked benzene rings determined
  with direct electrode-to-benzene ring connections
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 133
year: '2011'
...
---
OA_type: closed access
_id: '18021'
abstract:
- lang: eng
  text: Charge transport across metal–molecule interfaces has an important role in
    organic electronics1. Typically, chemical link groups such as thiols2 or amines3
    are used to bind organic molecules to metal electrodes in single-molecule circuits,
    with these groups controlling both the physical structure and the electronic coupling
    at the interface. Direct metal–carbon coupling has been shown through C60, benzene
    and π-stacked benzene4,5,6,7, but ideally the carbon backbone of the molecule
    should be covalently bonded to the electrode without intervening link groups.
    Here, we demonstrate a method to create junctions with such contacts. Trimethyl
    tin (SnMe3)-terminated polymethylene chains are used to form single-molecule junctions
    with a break-junction technique2,3. Gold atoms at the electrode displace the SnMe3
    linkers, leading to the formation of direct Au–C bonded single-molecule junctions
    with a conductance that is ∼100 times larger than analogous alkanes with most
    other terminations. The conductance of these Au–C bonded alkanes decreases exponentially
    with molecular length, with a decay constant of 0.97 per methylene, consistent
    with a non-resonant transport mechanism. Control experiments and ab initio calculations
    show that high conductances are achieved because a covalent Au–C sigma (σ) bond
    is formed. This offers a new method for making reproducible and highly conducting
    metal–organic contacts.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Z.-L.
  full_name: Cheng, Z.-L.
  last_name: Cheng
- first_name: R.
  full_name: Skouta, R.
  last_name: Skouta
- first_name: H.
  full_name: Vazquez, H.
  last_name: Vazquez
- first_name: J. R.
  full_name: Widawsky, J. R.
  last_name: Widawsky
- first_name: S.
  full_name: Schneebeli, S.
  last_name: Schneebeli
- first_name: W.
  full_name: Chen, W.
  last_name: Chen
- first_name: M. S.
  full_name: Hybertsen, M. S.
  last_name: Hybertsen
- first_name: R.
  full_name: Breslow, R.
  last_name: Breslow
- first_name: Latha
  full_name: Venkataraman, Latha
  id: 9ebb78a5-cc0d-11ee-8322-fae086a32caf
  last_name: Venkataraman
  orcid: 0000-0002-6957-6089
citation:
  ama: Cheng Z-L, Skouta R, Vazquez H, et al. In situ formation of highly conducting
    covalent Au–C contacts for single-molecule junctions. <i>Nature Nanotechnology</i>.
    2011;6(6):353-357. doi:<a href="https://doi.org/10.1038/nnano.2011.66">10.1038/nnano.2011.66</a>
  apa: Cheng, Z.-L., Skouta, R., Vazquez, H., Widawsky, J. R., Schneebeli, S., Chen,
    W., … Venkataraman, L. (2011). In situ formation of highly conducting covalent
    Au–C contacts for single-molecule junctions. <i>Nature Nanotechnology</i>. Springer
    Nature. <a href="https://doi.org/10.1038/nnano.2011.66">https://doi.org/10.1038/nnano.2011.66</a>
  chicago: Cheng, Z.-L., R. Skouta, H. Vazquez, J. R. Widawsky, S. Schneebeli, W.
    Chen, M. S. Hybertsen, R. Breslow, and Latha Venkataraman. “In Situ Formation
    of Highly Conducting Covalent Au–C Contacts for Single-Molecule Junctions.” <i>Nature
    Nanotechnology</i>. Springer Nature, 2011. <a href="https://doi.org/10.1038/nnano.2011.66">https://doi.org/10.1038/nnano.2011.66</a>.
  ieee: Z.-L. Cheng <i>et al.</i>, “In situ formation of highly conducting covalent
    Au–C contacts for single-molecule junctions,” <i>Nature Nanotechnology</i>, vol.
    6, no. 6. Springer Nature, pp. 353–357, 2011.
  ista: Cheng Z-L, Skouta R, Vazquez H, Widawsky JR, Schneebeli S, Chen W, Hybertsen
    MS, Breslow R, Venkataraman L. 2011. In situ formation of highly conducting covalent
    Au–C contacts for single-molecule junctions. Nature Nanotechnology. 6(6), 353–357.
  mla: Cheng, Z. L., et al. “In Situ Formation of Highly Conducting Covalent Au–C
    Contacts for Single-Molecule Junctions.” <i>Nature Nanotechnology</i>, vol. 6,
    no. 6, Springer Nature, 2011, pp. 353–57, doi:<a href="https://doi.org/10.1038/nnano.2011.66">10.1038/nnano.2011.66</a>.
  short: Z.-L. Cheng, R. Skouta, H. Vazquez, J.R. Widawsky, S. Schneebeli, W. Chen,
    M.S. Hybertsen, R. Breslow, L. Venkataraman, Nature Nanotechnology 6 (2011) 353–357.
date_created: 2024-09-09T12:57:48Z
date_published: 2011-06-01T00:00:00Z
date_updated: 2025-01-03T09:51:33Z
day: '01'
doi: 10.1038/nnano.2011.66
extern: '1'
external_id:
  pmid:
  - '21552252'
intvolume: '         6'
issue: '6'
language:
- iso: eng
month: '06'
oa_version: None
page: 353-357
pmid: 1
publication: Nature Nanotechnology
publication_identifier:
  eissn:
  - 1748-3395
  issn:
  - 1748-3387
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: In situ formation of highly conducting covalent Au–C contacts for single-molecule
  junctions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 6
year: '2011'
...
---
_id: '1815'
abstract:
- lang: eng
  text: Many membrane channels and receptors exhibit adaptive, or desensitized, response
    to a strong sustained input stimulus, often supported by protein activity-dependent
    inactivation. Adaptive response is thought to be related to various cellular functions
    such as homeostasis and enlargement of dynamic range by background compensation.
    Here we study the quantitative relation between adaptive response and background
    compensation within a modeling framework. We show that any particular type of
    adaptive response is neither sufficient nor necessary for adaptive enlargement
    of dynamic range. In particular a precise adaptive response, where system activity
    is maintained at a constant level at steady state, does not ensure a large dynamic
    range neither in input signal nor in system output. A general mechanism for input
    dynamic range enlargement can come about from the activity-dependent modulation
    of protein responsiveness by multiple biochemical modification, regardless of
    the type of adaptive response it induces. Therefore hierarchical biochemical processes
    such as methylation and phosphorylation are natural candidates to induce this
    property in signaling systems.
author:
- first_name: Tamar
  full_name: Tamar Friedlander
  id: 36A5845C-F248-11E8-B48F-1D18A9856A87
  last_name: Friedlander
- first_name: Naama
  full_name: Brenner, Naama
  last_name: Brenner
citation:
  ama: Friedlander T, Brenner N. Adaptive response and enlargement of dynamic range.
    <i>Mathematical Biosciences and Engineering</i>. 2011;8(2):515-526. doi:<a href="https://doi.org/10.3934/mbe.2011.8.515">10.3934/mbe.2011.8.515</a>
  apa: Friedlander, T., &#38; Brenner, N. (2011). Adaptive response and enlargement
    of dynamic range. <i>Mathematical Biosciences and Engineering</i>. Arizona State
    University. <a href="https://doi.org/10.3934/mbe.2011.8.515">https://doi.org/10.3934/mbe.2011.8.515</a>
  chicago: Friedlander, Tamar, and Naama Brenner. “Adaptive Response and Enlargement
    of Dynamic Range.” <i>Mathematical Biosciences and Engineering</i>. Arizona State
    University, 2011. <a href="https://doi.org/10.3934/mbe.2011.8.515">https://doi.org/10.3934/mbe.2011.8.515</a>.
  ieee: T. Friedlander and N. Brenner, “Adaptive response and enlargement of dynamic
    range,” <i>Mathematical Biosciences and Engineering</i>, vol. 8, no. 2. Arizona
    State University, pp. 515–526, 2011.
  ista: Friedlander T, Brenner N. 2011. Adaptive response and enlargement of dynamic
    range. Mathematical Biosciences and Engineering. 8(2), 515–526.
  mla: Friedlander, Tamar, and Naama Brenner. “Adaptive Response and Enlargement of
    Dynamic Range.” <i>Mathematical Biosciences and Engineering</i>, vol. 8, no. 2,
    Arizona State University, 2011, pp. 515–26, doi:<a href="https://doi.org/10.3934/mbe.2011.8.515">10.3934/mbe.2011.8.515</a>.
  short: T. Friedlander, N. Brenner, Mathematical Biosciences and Engineering 8 (2011)
    515–526.
date_created: 2018-12-11T11:54:10Z
date_published: 2011-04-02T00:00:00Z
date_updated: 2021-01-12T06:53:23Z
day: '02'
doi: 10.3934/mbe.2011.8.515
extern: 1
intvolume: '         8'
issue: '2'
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1003.2791
month: '04'
oa: 1
page: 515 - 526
publication: Mathematical Biosciences and Engineering
publication_status: published
publisher: Arizona State University
publist_id: '5291'
quality_controlled: 0
status: public
title: Adaptive response and enlargement of dynamic range
type: journal_article
volume: 8
year: '2011'
...
---
OA_place: repository
OA_type: green
_id: '18362'
abstract:
- lang: eng
  text: Maximally stable component detection is a very popular method for feature
    analysis in images, mainly due to its low computation cost and high repeatability.
    With the recent advance of feature-based methods in geometric shape analysis,
    there is significant interest in finding analogous approaches in the 3D world.
    In this paper, we formulate a diffusion-geometric framework for stable component
    detection in non-rigid 3D shapes, which can be used for geometric feature detection
    and description. A quantitative evaluation of our method on the SHREC’10 feature
    detection benchmark shows its potential as a source of high-quality features.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Roee
  full_name: Litman, Roee
  last_name: Litman
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: Michael M.
  full_name: Bronstein, Michael M.
  last_name: Bronstein
citation:
  ama: Litman R, Bronstein AM, Bronstein MM. Diffusion-geometric maximally stable
    component detection in deformable shapes. <i>Computers &#38; Graphics</i>. 2011;35(3):549-560.
    doi:<a href="https://doi.org/10.1016/j.cag.2011.03.011">10.1016/j.cag.2011.03.011</a>
  apa: Litman, R., Bronstein, A. M., &#38; Bronstein, M. M. (2011). Diffusion-geometric
    maximally stable component detection in deformable shapes. <i>Computers &#38;
    Graphics</i>. Elsevier. <a href="https://doi.org/10.1016/j.cag.2011.03.011">https://doi.org/10.1016/j.cag.2011.03.011</a>
  chicago: Litman, Roee, Alex M. Bronstein, and Michael M. Bronstein. “Diffusion-Geometric
    Maximally Stable Component Detection in Deformable Shapes.” <i>Computers &#38;
    Graphics</i>. Elsevier, 2011. <a href="https://doi.org/10.1016/j.cag.2011.03.011">https://doi.org/10.1016/j.cag.2011.03.011</a>.
  ieee: R. Litman, A. M. Bronstein, and M. M. Bronstein, “Diffusion-geometric maximally
    stable component detection in deformable shapes,” <i>Computers &#38; Graphics</i>,
    vol. 35, no. 3. Elsevier, pp. 549–560, 2011.
  ista: Litman R, Bronstein AM, Bronstein MM. 2011. Diffusion-geometric maximally
    stable component detection in deformable shapes. Computers &#38; Graphics. 35(3),
    549–560.
  mla: Litman, Roee, et al. “Diffusion-Geometric Maximally Stable Component Detection
    in Deformable Shapes.” <i>Computers &#38; Graphics</i>, vol. 35, no. 3, Elsevier,
    2011, pp. 549–60, doi:<a href="https://doi.org/10.1016/j.cag.2011.03.011">10.1016/j.cag.2011.03.011</a>.
  short: R. Litman, A.M. Bronstein, M.M. Bronstein, Computers &#38; Graphics 35 (2011)
    549–560.
date_created: 2024-10-15T11:20:54Z
date_published: 2011-06-01T00:00:00Z
date_updated: 2024-11-12T08:40:40Z
day: '01'
doi: 10.1016/j.cag.2011.03.011
extern: '1'
external_id:
  arxiv:
  - '1012.3951'
intvolume: '        35'
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1012.3951
month: '06'
oa: 1
oa_version: Preprint
page: 549-560
publication: Computers & Graphics
publication_identifier:
  issn:
  - 0097-8493
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Diffusion-geometric maximally stable component detection in deformable shapes
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 35
year: '2011'
...
---
OA_place: repository
OA_type: green
_id: '18363'
abstract:
- lang: eng
  text: "Natural objects can be subject to various transformations yet still preserve
    properties that we refer to as invariants. Here, we use definitions of affine-invariant
    arclength for surfaces in \r\n in order to extend the set of existing non-rigid
    shape analysis tools. We show that by re-defining the surface metric as its equi-affine
    version, the surface with its modified metric tensor can be treated as a canonical
    Euclidean object on which most classical Euclidean processing and analysis tools
    can be applied. The new definition of a metric is used to extend the fast marching
    method technique for computing geodesic distances on surfaces, where now, the
    distances are defined with respect to an affine-invariant arclength. Applications
    of the proposed framework demonstrate its invariance, efficiency, and accuracy
    in shape analysis."
article_processing_charge: No
article_type: letter_note
arxiv: 1
author:
- first_name: Dan
  full_name: Raviv, Dan
  last_name: Raviv
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: Michael M.
  full_name: Bronstein, Michael M.
  last_name: Bronstein
- first_name: Ron
  full_name: Kimmel, Ron
  last_name: Kimmel
- first_name: Nir
  full_name: Sochen, Nir
  last_name: Sochen
citation:
  ama: Raviv D, Bronstein AM, Bronstein MM, Kimmel R, Sochen N. Affine-invariant geodesic
    geometry of deformable 3D shapes. <i>Computers &#38; Graphics</i>. 2011;35(3):692-697.
    doi:<a href="https://doi.org/10.1016/j.cag.2011.03.030">10.1016/j.cag.2011.03.030</a>
  apa: Raviv, D., Bronstein, A. M., Bronstein, M. M., Kimmel, R., &#38; Sochen, N.
    (2011). Affine-invariant geodesic geometry of deformable 3D shapes. <i>Computers
    &#38; Graphics</i>. Elsevier. <a href="https://doi.org/10.1016/j.cag.2011.03.030">https://doi.org/10.1016/j.cag.2011.03.030</a>
  chicago: Raviv, Dan, Alex M. Bronstein, Michael M. Bronstein, Ron Kimmel, and Nir
    Sochen. “Affine-Invariant Geodesic Geometry of Deformable 3D Shapes.” <i>Computers
    &#38; Graphics</i>. Elsevier, 2011. <a href="https://doi.org/10.1016/j.cag.2011.03.030">https://doi.org/10.1016/j.cag.2011.03.030</a>.
  ieee: D. Raviv, A. M. Bronstein, M. M. Bronstein, R. Kimmel, and N. Sochen, “Affine-invariant
    geodesic geometry of deformable 3D shapes,” <i>Computers &#38; Graphics</i>, vol.
    35, no. 3. Elsevier, pp. 692–697, 2011.
  ista: Raviv D, Bronstein AM, Bronstein MM, Kimmel R, Sochen N. 2011. Affine-invariant
    geodesic geometry of deformable 3D shapes. Computers &#38; Graphics. 35(3), 692–697.
  mla: Raviv, Dan, et al. “Affine-Invariant Geodesic Geometry of Deformable 3D Shapes.”
    <i>Computers &#38; Graphics</i>, vol. 35, no. 3, Elsevier, 2011, pp. 692–97, doi:<a
    href="https://doi.org/10.1016/j.cag.2011.03.030">10.1016/j.cag.2011.03.030</a>.
  short: D. Raviv, A.M. Bronstein, M.M. Bronstein, R. Kimmel, N. Sochen, Computers
    &#38; Graphics 35 (2011) 692–697.
date_created: 2024-10-15T11:20:54Z
date_published: 2011-06-01T00:00:00Z
date_updated: 2024-11-12T08:37:24Z
day: '01'
doi: 10.1016/j.cag.2011.03.030
extern: '1'
external_id:
  arxiv:
  - '1012.5936'
intvolume: '        35'
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1012.5936
month: '06'
oa: 1
oa_version: Preprint
page: 692-697
publication: Computers & Graphics
publication_identifier:
  issn:
  - 0097-8493
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Affine-invariant geodesic geometry of deformable 3D shapes
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 35
year: '2011'
...
---
_id: '18377'
abstract:
- lang: eng
  text: We introduce an (equi-)affine invariant diffusion geometry by which surfaces
    that go through squeeze and shear transformations can still be properly analyzed.
    The definition of an affine invariant metric enables us to construct an invariant
    Laplacian from which local and global geometric structures are extracted. Applications
    of the proposed framework demonstrate its power in generalizing and enriching
    the existing set of tools for shape analysis.
article_number: '5995486'
article_processing_charge: No
arxiv: 1
author:
- first_name: Dan
  full_name: Raviv, Dan
  last_name: Raviv
- first_name: Michael M.
  full_name: Bronstein, Michael M.
  last_name: Bronstein
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: Ron
  full_name: Kimmel, Ron
  last_name: Kimmel
- first_name: Nir
  full_name: Sochen, Nir
  last_name: Sochen
citation:
  ama: 'Raviv D, Bronstein MM, Bronstein AM, Kimmel R, Sochen N. Affine-invariant
    diffusion geometry for the analysis of deformable 3D shapes. In: <i>CVPR 2011</i>.
    IEEE; 2011. doi:<a href="https://doi.org/10.1109/cvpr.2011.5995486">10.1109/cvpr.2011.5995486</a>'
  apa: 'Raviv, D., Bronstein, M. M., Bronstein, A. M., Kimmel, R., &#38; Sochen, N.
    (2011). Affine-invariant diffusion geometry for the analysis of deformable 3D
    shapes. In <i>CVPR 2011</i>. Colorado Springs, CO, United States: IEEE. <a href="https://doi.org/10.1109/cvpr.2011.5995486">https://doi.org/10.1109/cvpr.2011.5995486</a>'
  chicago: Raviv, Dan, Michael M. Bronstein, Alex M. Bronstein, Ron Kimmel, and Nir
    Sochen. “Affine-Invariant Diffusion Geometry for the Analysis of Deformable 3D
    Shapes.” In <i>CVPR 2011</i>. IEEE, 2011. <a href="https://doi.org/10.1109/cvpr.2011.5995486">https://doi.org/10.1109/cvpr.2011.5995486</a>.
  ieee: D. Raviv, M. M. Bronstein, A. M. Bronstein, R. Kimmel, and N. Sochen, “Affine-invariant
    diffusion geometry for the analysis of deformable 3D shapes,” in <i>CVPR 2011</i>,
    Colorado Springs, CO, United States, 2011.
  ista: Raviv D, Bronstein MM, Bronstein AM, Kimmel R, Sochen N. 2011. Affine-invariant
    diffusion geometry for the analysis of deformable 3D shapes. CVPR 2011. IEEE Computer
    Vision and Pattern Recognition (CVPR) 2011, 5995486.
  mla: Raviv, Dan, et al. “Affine-Invariant Diffusion Geometry for the Analysis of
    Deformable 3D Shapes.” <i>CVPR 2011</i>, 5995486, IEEE, 2011, doi:<a href="https://doi.org/10.1109/cvpr.2011.5995486">10.1109/cvpr.2011.5995486</a>.
  short: D. Raviv, M.M. Bronstein, A.M. Bronstein, R. Kimmel, N. Sochen, in:, CVPR
    2011, IEEE, 2011.
conference:
  end_date: 2011-06-25
  location: Colorado Springs, CO, United States
  name: IEEE Computer Vision and Pattern Recognition (CVPR) 2011
  start_date: 2011-06-20
date_created: 2024-10-15T11:20:54Z
date_published: 2011-08-22T00:00:00Z
date_updated: 2024-12-05T14:15:22Z
day: '22'
doi: 10.1109/cvpr.2011.5995486
extern: '1'
external_id:
  arxiv:
  - '1012.5933'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.1012.5933
month: '08'
oa: 1
oa_version: Preprint
publication: CVPR 2011
publication_identifier:
  eissn:
  - 1063-6919
  isbn:
  - '9781457703942'
publication_status: published
publisher: IEEE
quality_controlled: '1'
status: public
title: Affine-invariant diffusion geometry for the analysis of deformable 3D shapes
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
year: '2011'
...
---
_id: '18394'
abstract:
- lang: eng
  text: In this paper we present a novel approach for fast search of handwritten Arabic
    word-parts within large lexicons. The algorithm runs through three steps to achieve
    the required results. First it warps multiple appearances of each word-part in
    the lexicon for embedding into the same euclidean space. The embedding is done
    based on the warping path produced by the Dynamic Time Warping (DTW) process while
    calculating the similarity distance. In the next step, all samples of different
    word-parts are resampled uniformly to the same size. The kd-tree structure is
    used to store all shapes representing word parts in the lexicon. Fast approximation
    of k-nearest neighbors generates a short list of candidates to be presented to
    the next step. In the third step, the Active-DTW [15] algorithm is used to examine
    each sample in the short list and give final accurate results. We demonstrate
    our method on a database of 23,500 images of word-parts extracted from the IFN/ENIT
    database [6] and 22,000 images collected from 93 writers. Our method achieves
    a speedup of 5 orders of magnitude over the exact method, at the cost of only
    a 3.8% reduction in accuracy.
article_number: '6065278'
article_processing_charge: No
author:
- first_name: Raid
  full_name: Saabni, Raid
  last_name: Saabni
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
citation:
  ama: 'Saabni R, Bronstein AM. Fast key-word searching via embedding and active-DTW.
    In: <i>2011 International Conference on Document Analysis and Recognition</i>.
    IEEE; 2011. doi:<a href="https://doi.org/10.1109/icdar.2011.23">10.1109/icdar.2011.23</a>'
  apa: 'Saabni, R., &#38; Bronstein, A. M. (2011). Fast key-word searching via embedding
    and active-DTW. In <i>2011 International Conference on Document Analysis and Recognition</i>.
    Beijing, China: IEEE. <a href="https://doi.org/10.1109/icdar.2011.23">https://doi.org/10.1109/icdar.2011.23</a>'
  chicago: Saabni, Raid, and Alex M. Bronstein. “Fast Key-Word Searching via Embedding
    and Active-DTW.” In <i>2011 International Conference on Document Analysis and
    Recognition</i>. IEEE, 2011. <a href="https://doi.org/10.1109/icdar.2011.23">https://doi.org/10.1109/icdar.2011.23</a>.
  ieee: R. Saabni and A. M. Bronstein, “Fast key-word searching via embedding and
    active-DTW,” in <i>2011 International Conference on Document Analysis and Recognition</i>,
    Beijing, China, 2011.
  ista: Saabni R, Bronstein AM. 2011. Fast key-word searching via embedding and active-DTW.
    2011 International Conference on Document Analysis and Recognition. 11th International
    Conference on Document Analysis and Recognition, 6065278.
  mla: Saabni, Raid, and Alex M. Bronstein. “Fast Key-Word Searching via Embedding
    and Active-DTW.” <i>2011 International Conference on Document Analysis and Recognition</i>,
    6065278, IEEE, 2011, doi:<a href="https://doi.org/10.1109/icdar.2011.23">10.1109/icdar.2011.23</a>.
  short: R. Saabni, A.M. Bronstein, in:, 2011 International Conference on Document
    Analysis and Recognition, IEEE, 2011.
conference:
  end_date: 2011-09-21
  location: Beijing, China
  name: 11th International Conference on Document Analysis and Recognition
  start_date: 2011-09-18
date_created: 2024-10-15T11:20:54Z
date_published: 2011-11-03T00:00:00Z
date_updated: 2024-12-04T12:08:48Z
day: '03'
doi: 10.1109/icdar.2011.23
extern: '1'
language:
- iso: eng
month: '11'
oa_version: None
publication: 2011 International Conference on Document Analysis and Recognition
publication_identifier:
  eissn:
  - 2379-2140
  isbn:
  - '9781457713507'
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Fast key-word searching via embedding and active-DTW
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
year: '2011'
...
---
_id: '18406'
abstract:
- lang: eng
  text: Defining a suitable metric is one of the biggest challenges in deformable
    image fusion from different modalities. In this paper, we propose a novel approach
    for multi-modal metric learning in the deformable registration framework that
    consists of embedding data from both modalities into a common metric space whose
    metric is used to parametrize the similarity. Specifically, we use image representation
    in the Fourier/Gabor space which introduces invariance to the local pose parameters,
    and the Hamming metric as the target embedding space, which allows constructing
    the embedding using boosted learning algorithms. The resulting metric is incorporated
    into a discrete optimization framework. Very promising results demonstrate the
    potential of the proposed method.
article_number: '5872619'
article_processing_charge: No
author:
- first_name: Fabrice
  full_name: Michel, Fabrice
  last_name: Michel
- first_name: Michael
  full_name: Bronstein, Michael
  last_name: Bronstein
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: Nikos
  full_name: Paragios, Nikos
  last_name: Paragios
citation:
  ama: 'Michel F, Bronstein M, Bronstein AM, Paragios N. Boosted metric learning for
    3D multi-modal deformable registration. In: <i>2011 IEEE International Symposium
    on Biomedical Imaging: From Nano to Macro</i>. IEEE; 2011. doi:<a href="https://doi.org/10.1109/isbi.2011.5872619">10.1109/isbi.2011.5872619</a>'
  apa: 'Michel, F., Bronstein, M., Bronstein, A. M., &#38; Paragios, N. (2011). Boosted
    metric learning for 3D multi-modal deformable registration. In <i>2011 IEEE International
    Symposium on Biomedical Imaging: From Nano to Macro</i>.  Chicago, IL, United
    States: IEEE. <a href="https://doi.org/10.1109/isbi.2011.5872619">https://doi.org/10.1109/isbi.2011.5872619</a>'
  chicago: 'Michel, Fabrice, Michael Bronstein, Alex M. Bronstein, and Nikos Paragios.
    “Boosted Metric Learning for 3D Multi-Modal Deformable Registration.” In <i>2011
    IEEE International Symposium on Biomedical Imaging: From Nano to Macro</i>. IEEE,
    2011. <a href="https://doi.org/10.1109/isbi.2011.5872619">https://doi.org/10.1109/isbi.2011.5872619</a>.'
  ieee: 'F. Michel, M. Bronstein, A. M. Bronstein, and N. Paragios, “Boosted metric
    learning for 3D multi-modal deformable registration,” in <i>2011 IEEE International
    Symposium on Biomedical Imaging: From Nano to Macro</i>,  Chicago, IL, United
    States, 2011.'
  ista: 'Michel F, Bronstein M, Bronstein AM, Paragios N. 2011. Boosted metric learning
    for 3D multi-modal deformable registration. 2011 IEEE International Symposium
    on Biomedical Imaging: From Nano to Macro. 8th IEEE International Symposium on
    Biomedical Imaging: From Nano to Macro, 5872619.'
  mla: 'Michel, Fabrice, et al. “Boosted Metric Learning for 3D Multi-Modal Deformable
    Registration.” <i>2011 IEEE International Symposium on Biomedical Imaging: From
    Nano to Macro</i>, 5872619, IEEE, 2011, doi:<a href="https://doi.org/10.1109/isbi.2011.5872619">10.1109/isbi.2011.5872619</a>.'
  short: 'F. Michel, M. Bronstein, A.M. Bronstein, N. Paragios, in:, 2011 IEEE International
    Symposium on Biomedical Imaging: From Nano to Macro, IEEE, 2011.'
conference:
  end_date: 2011-04-02
  location: ' Chicago, IL, United States'
  name: '8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro'
  start_date: 2011-03-30
date_created: 2024-10-15T11:20:54Z
date_published: 2011-06-09T00:00:00Z
date_updated: 2024-12-04T11:55:42Z
day: '09'
doi: 10.1109/isbi.2011.5872619
extern: '1'
language:
- iso: eng
month: '06'
oa_version: None
publication: '2011 IEEE International Symposium on Biomedical Imaging: From Nano to
  Macro'
publication_identifier:
  eissn:
  - 1945-8452
  isbn:
  - '9781424441280'
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: Boosted metric learning for 3D multi-modal deformable registration
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
year: '2011'
...
---
OA_type: closed access
_id: '18411'
abstract:
- lang: eng
  text: Recent works have shown the use of diffusion geometry for various pattern
    recognition applications, including nonrigid shape analysis. In this paper, we
    introduce spectral shape distance as a general framework for distribution-based
    shape similarity and show that two recent methods for shape similarity due to
    Rustamov and Mahmoudi and Sapiro are particular cases thereof.
article_processing_charge: No
article_type: original
author:
- first_name: Michael M
  full_name: Bronstein, Michael M
  last_name: Bronstein
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
citation:
  ama: Bronstein MM, Bronstein AM. Shape recognition with spectral distances. <i>IEEE
    Transactions on Pattern Analysis and Machine Intelligence</i>. 2011;33(5):1065-1071.
    doi:<a href="https://doi.org/10.1109/tpami.2010.210">10.1109/tpami.2010.210</a>
  apa: Bronstein, M. M., &#38; Bronstein, A. M. (2011). Shape recognition with spectral
    distances. <i>IEEE Transactions on Pattern Analysis and Machine Intelligence</i>.
    Institute of Electrical and Electronics Engineers. <a href="https://doi.org/10.1109/tpami.2010.210">https://doi.org/10.1109/tpami.2010.210</a>
  chicago: Bronstein, Michael M, and Alex M. Bronstein. “Shape Recognition with Spectral
    Distances.” <i>IEEE Transactions on Pattern Analysis and Machine Intelligence</i>.
    Institute of Electrical and Electronics Engineers, 2011. <a href="https://doi.org/10.1109/tpami.2010.210">https://doi.org/10.1109/tpami.2010.210</a>.
  ieee: M. M. Bronstein and A. M. Bronstein, “Shape recognition with spectral distances,”
    <i>IEEE Transactions on Pattern Analysis and Machine Intelligence</i>, vol. 33,
    no. 5. Institute of Electrical and Electronics Engineers, pp. 1065–1071, 2011.
  ista: Bronstein MM, Bronstein AM. 2011. Shape recognition with spectral distances.
    IEEE Transactions on Pattern Analysis and Machine Intelligence. 33(5), 1065–1071.
  mla: Bronstein, Michael M., and Alex M. Bronstein. “Shape Recognition with Spectral
    Distances.” <i>IEEE Transactions on Pattern Analysis and Machine Intelligence</i>,
    vol. 33, no. 5, Institute of Electrical and Electronics Engineers, 2011, pp. 1065–71,
    doi:<a href="https://doi.org/10.1109/tpami.2010.210">10.1109/tpami.2010.210</a>.
  short: M.M. Bronstein, A.M. Bronstein, IEEE Transactions on Pattern Analysis and
    Machine Intelligence 33 (2011) 1065–1071.
date_created: 2024-10-15T11:20:54Z
date_published: 2011-05-01T00:00:00Z
date_updated: 2024-10-22T08:02:31Z
day: '01'
doi: 10.1109/tpami.2010.210
extern: '1'
external_id:
  pmid:
  - '21135442'
intvolume: '        33'
issue: '5'
language:
- iso: eng
month: '05'
oa_version: None
page: 1065-1071
pmid: 1
publication: IEEE Transactions on Pattern Analysis and Machine Intelligence
publication_identifier:
  issn:
  - 0162-8828
publication_status: published
publisher: Institute of Electrical and Electronics Engineers
quality_controlled: '1'
scopus_import: '1'
status: public
title: Shape recognition with spectral distances
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 33
year: '2011'
...
---
_id: '18433'
abstract:
- lang: eng
  text: The computer vision and pattern recognition communities have recently witnessed
    a surge of feature-based methods in object recognition and image retrieval applications.
    These methods allow representing images as collections of “visual words” and treat
    them using text search approaches following the “bag of features” paradigm. In
    this article, we explore analogous approaches in the 3D world applied to the problem
    of nonrigid shape retrieval in large databases. Using multiscale diffusion heat
    kernels as “geometric words,” we construct compact and informative shape descriptors
    by means of the “bag of features” approach. We also show that considering pairs
    of “geometric words” (“geometric expressions”) allows creating spatially sensitive
    bags of features with better discriminative power. Finally, adopting metric learning
    approaches, we show that shapes can be efficiently represented as binary codes.
    Our approach achieves state-of-the-art results on the SHREC 2010 large-scale shape
    retrieval benchmark.
article_processing_charge: No
author:
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: Michael M.
  full_name: Bronstein, Michael M.
  last_name: Bronstein
- first_name: Leonidas J.
  full_name: Guibas, Leonidas J.
  last_name: Guibas
- first_name: Maks
  full_name: Ovsjanikov, Maks
  last_name: Ovsjanikov
citation:
  ama: 'Bronstein AM, Bronstein MM, Guibas LJ, Ovsjanikov M. Shape google: Geometric
    words and expressions for invariant shape retrieval. <i>ACM Transactions on Graphics</i>.
    2011;30(1):1-20. doi:<a href="https://doi.org/10.1145/1899404.1899405">10.1145/1899404.1899405</a>'
  apa: 'Bronstein, A. M., Bronstein, M. M., Guibas, L. J., &#38; Ovsjanikov, M. (2011).
    Shape google: Geometric words and expressions for invariant shape retrieval. <i>ACM
    Transactions on Graphics</i>. Association for Computing Machinery. <a href="https://doi.org/10.1145/1899404.1899405">https://doi.org/10.1145/1899404.1899405</a>'
  chicago: 'Bronstein, Alex M., Michael M. Bronstein, Leonidas J. Guibas, and Maks
    Ovsjanikov. “Shape Google: Geometric Words and Expressions for Invariant Shape
    Retrieval.” <i>ACM Transactions on Graphics</i>. Association for Computing Machinery,
    2011. <a href="https://doi.org/10.1145/1899404.1899405">https://doi.org/10.1145/1899404.1899405</a>.'
  ieee: 'A. M. Bronstein, M. M. Bronstein, L. J. Guibas, and M. Ovsjanikov, “Shape
    google: Geometric words and expressions for invariant shape retrieval,” <i>ACM
    Transactions on Graphics</i>, vol. 30, no. 1. Association for Computing Machinery,
    pp. 1–20, 2011.'
  ista: 'Bronstein AM, Bronstein MM, Guibas LJ, Ovsjanikov M. 2011. Shape google:
    Geometric words and expressions for invariant shape retrieval. ACM Transactions
    on Graphics. 30(1), 1–20.'
  mla: 'Bronstein, Alex M., et al. “Shape Google: Geometric Words and Expressions
    for Invariant Shape Retrieval.” <i>ACM Transactions on Graphics</i>, vol. 30,
    no. 1, Association for Computing Machinery, 2011, pp. 1–20, doi:<a href="https://doi.org/10.1145/1899404.1899405">10.1145/1899404.1899405</a>.'
  short: A.M. Bronstein, M.M. Bronstein, L.J. Guibas, M. Ovsjanikov, ACM Transactions
    on Graphics 30 (2011) 1–20.
date_created: 2024-10-15T11:20:55Z
date_published: 2011-01-01T00:00:00Z
date_updated: 2024-12-18T14:59:43Z
day: '01'
doi: 10.1145/1899404.1899405
extern: '1'
intvolume: '        30'
issue: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 1-20
publication: ACM Transactions on Graphics
publication_identifier:
  eissn:
  - 1557-7368
  issn:
  - 0730-0301
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Shape google: Geometric words and expressions for invariant shape retrieval'
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 30
year: '2011'
...
---
_id: '757'
abstract:
- lang: eng
  text: Synchronous distributed algorithms are easier to design and prove correct
    than algorithms that tolerate asynchrony. Yet, in the real world, networks experience
    asynchrony and other timing anomalies. In this paper, we address the question
    of how to efficiently transform an algorithm that relies on synchronization into
    an algorithm that tolerates asynchronous executions. We introduce a transformation
    technique from synchronous algorithms to indulgent algorithms [1], which induces
    only a constant overhead in terms of time complexity in well-behaved executions.
    Our technique is based on a new abstraction we call an asynchrony detector, which
    the participating processes implement collectively. The resulting transformation
    works for a large class of colorless tasks, including consensus and set agreement.
    Interestingly, we also show that our technique is relevant for colored tasks,
    by applying it to the renaming problem, to obtain the first indulgent renaming
    algorithm.
acknowledgement: "The authors would like to thank Prof. Hagit Attiya and Nikola\r\nKneˇ\r\nzevi
  ́\r\nc for their help on previous drafts of this paper, and the anonymous reviewers\r\nfor
  their useful feedback."
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
- first_name: Seth
  full_name: Gilbert, Seth
  last_name: Gilbert
- first_name: Rachid
  full_name: Guerraoui, Rachid
  last_name: Guerraoui
- first_name: Corentin
  full_name: Travers, Corentin
  last_name: Travers
citation:
  ama: 'Alistarh D-A, Gilbert S, Guerraoui R, Travers C. Generating fast indulgent
    algorithms. In: Vol 6522 LNCS. Springer; 2011:41-52. doi:<a href="https://doi.org/10.1007/978-3-642-17679-1_4">10.1007/978-3-642-17679-1_4</a>'
  apa: 'Alistarh, D.-A., Gilbert, S., Guerraoui, R., &#38; Travers, C. (2011). Generating
    fast indulgent algorithms (Vol. 6522 LNCS, pp. 41–52). Presented at the ICDCN:
    International Conference on Distributed Computing and Networking, Springer. <a
    href="https://doi.org/10.1007/978-3-642-17679-1_4">https://doi.org/10.1007/978-3-642-17679-1_4</a>'
  chicago: Alistarh, Dan-Adrian, Seth Gilbert, Rachid Guerraoui, and Corentin Travers.
    “Generating Fast Indulgent Algorithms,” 6522 LNCS:41–52. Springer, 2011. <a href="https://doi.org/10.1007/978-3-642-17679-1_4">https://doi.org/10.1007/978-3-642-17679-1_4</a>.
  ieee: 'D.-A. Alistarh, S. Gilbert, R. Guerraoui, and C. Travers, “Generating fast
    indulgent algorithms,” presented at the ICDCN: International Conference on Distributed
    Computing and Networking, 2011, vol. 6522 LNCS, pp. 41–52.'
  ista: 'Alistarh D-A, Gilbert S, Guerraoui R, Travers C. 2011. Generating fast indulgent
    algorithms. ICDCN: International Conference on Distributed Computing and Networking,
    LNCS, vol. 6522 LNCS, 41–52.'
  mla: Alistarh, Dan-Adrian, et al. <i>Generating Fast Indulgent Algorithms</i>. Vol.
    6522 LNCS, Springer, 2011, pp. 41–52, doi:<a href="https://doi.org/10.1007/978-3-642-17679-1_4">10.1007/978-3-642-17679-1_4</a>.
  short: D.-A. Alistarh, S. Gilbert, R. Guerraoui, C. Travers, in:, Springer, 2011,
    pp. 41–52.
conference:
  name: 'ICDCN: International Conference on Distributed Computing and Networking'
date_created: 2018-12-11T11:48:20Z
date_published: 2011-01-01T00:00:00Z
date_updated: 2023-02-23T13:11:09Z
day: '01'
doi: 10.1007/978-3-642-17679-1_4
extern: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 41 - 52
publication_status: published
publisher: Springer
publist_id: '6898'
status: public
title: Generating fast indulgent algorithms
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 6522 LNCS
year: '2011'
...
---
_id: '759'
abstract:
- lang: eng
  text: 'We study the complexity of renaming, a fundamental problem in distributed
    computing in which a set of processes need to pick distinct names from a given
    namespace. We prove an individual lower bound of Ω(k) process steps for deterministic
    renaming into any namespace of size sub-exponential in k, where k is the number
    of participants. This bound is tight: it draws an exponential separation between
    deterministic and randomized solutions, and implies new tight bounds for deterministic
    fetch-and-increment registers, queues and stacks. The proof of the bound is interesting
    in its own right, for it relies on the first reduction from renaming to another
    fundamental problem in distributed computing: mutual exclusion. We complement
    our individual bound with a global lower bound of Ω(k log (k/c)) on the total
    step complexity of renaming into a namespace of size ck, for any c ≥ 1. This applies
    to randomized algorithms against a strong adversary, and helps derive new global
    lower bounds for randomized approximate counter and fetch-and-increment implementations,
    all tight within logarithmic factors.'
acknowledgement: "The authors would like to thank Hagit Attiya and Keren\r\nCensor-Hillel
  \ for  discussions  and  feedback  on  earlier  versions  of  this  paper,  and
  \ the  anonymous  reviewers  for  their\r\nvery useful suggestions."
article_processing_charge: No
author:
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
- first_name: James
  full_name: Aspnes, James
  last_name: Aspnes
- first_name: Seth
  full_name: Gilbert, Seth
  last_name: Gilbert
- first_name: Rachid
  full_name: Guerraoui, Rachid
  last_name: Guerraoui
citation:
  ama: 'Alistarh D-A, Aspnes J, Gilbert S, Guerraoui R. The complexity of renaming.
    In: IEEE; 2011:718-727. doi:<a href="https://doi.org/10.1109/FOCS.2011.66">10.1109/FOCS.2011.66</a>'
  apa: 'Alistarh, D.-A., Aspnes, J., Gilbert, S., &#38; Guerraoui, R. (2011). The
    complexity of renaming (pp. 718–727). Presented at the FOCS: Foundations of Computer
    Science, IEEE. <a href="https://doi.org/10.1109/FOCS.2011.66">https://doi.org/10.1109/FOCS.2011.66</a>'
  chicago: Alistarh, Dan-Adrian, James Aspnes, Seth Gilbert, and Rachid Guerraoui.
    “The Complexity of Renaming,” 718–27. IEEE, 2011. <a href="https://doi.org/10.1109/FOCS.2011.66">https://doi.org/10.1109/FOCS.2011.66</a>.
  ieee: 'D.-A. Alistarh, J. Aspnes, S. Gilbert, and R. Guerraoui, “The complexity
    of renaming,” presented at the FOCS: Foundations of Computer Science, 2011, pp.
    718–727.'
  ista: 'Alistarh D-A, Aspnes J, Gilbert S, Guerraoui R. 2011. The complexity of renaming.
    FOCS: Foundations of Computer Science, 718–727.'
  mla: Alistarh, Dan-Adrian, et al. <i>The Complexity of Renaming</i>. IEEE, 2011,
    pp. 718–27, doi:<a href="https://doi.org/10.1109/FOCS.2011.66">10.1109/FOCS.2011.66</a>.
  short: D.-A. Alistarh, J. Aspnes, S. Gilbert, R. Guerraoui, in:, IEEE, 2011, pp.
    718–727.
conference:
  name: 'FOCS: Foundations of Computer Science'
date_created: 2018-12-11T11:48:21Z
date_published: 2011-01-01T00:00:00Z
date_updated: 2023-02-23T13:11:40Z
day: '01'
doi: 10.1109/FOCS.2011.66
extern: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 718 - 727
publication_status: published
publisher: IEEE
publist_id: '6895'
status: public
title: The complexity of renaming
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2011'
...
---
_id: '760'
abstract:
- lang: eng
  text: A randomized implementation is given of a test-and-set register with O(log
    log n) individual step complexity and O(n) total step complexity against an oblivious
    adversary. The implementation is linearizable and multi-shot, and shows an exponential
    complexity improvement over previous solutions designed to work against a strong
    adversary.
acknowledgement: The work of Dan Alistarh was supported by the NCCR MICS Project.
  The work of James Aspnes was supported in part by NSF grant CCF-0916389.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Dan-Adrian
  full_name: Alistarh, Dan-Adrian
  id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
  last_name: Alistarh
  orcid: 0000-0003-3650-940X
- first_name: James
  full_name: Aspnes, James
  last_name: Aspnes
citation:
  ama: 'Alistarh D-A, Aspnes J. Sub-logarithmic test-and-set against a weak adversary.
    In: Vol 6950 LNCS. Springer; 2011:97-109. doi:<a href="https://doi.org/10.1007/978-3-642-24100-0_7">10.1007/978-3-642-24100-0_7</a>'
  apa: 'Alistarh, D.-A., &#38; Aspnes, J. (2011). Sub-logarithmic test-and-set against
    a weak adversary (Vol. 6950 LNCS, pp. 97–109). Presented at the DISC: Distributed
    Computing, Springer. <a href="https://doi.org/10.1007/978-3-642-24100-0_7">https://doi.org/10.1007/978-3-642-24100-0_7</a>'
  chicago: Alistarh, Dan-Adrian, and James Aspnes. “Sub-Logarithmic Test-and-Set against
    a Weak Adversary,” 6950 LNCS:97–109. Springer, 2011. <a href="https://doi.org/10.1007/978-3-642-24100-0_7">https://doi.org/10.1007/978-3-642-24100-0_7</a>.
  ieee: 'D.-A. Alistarh and J. Aspnes, “Sub-logarithmic test-and-set against a weak
    adversary,” presented at the DISC: Distributed Computing, 2011, vol. 6950 LNCS,
    pp. 97–109.'
  ista: 'Alistarh D-A, Aspnes J. 2011. Sub-logarithmic test-and-set against a weak
    adversary. DISC: Distributed Computing, LNCS, vol. 6950 LNCS, 97–109.'
  mla: Alistarh, Dan-Adrian, and James Aspnes. <i>Sub-Logarithmic Test-and-Set against
    a Weak Adversary</i>. Vol. 6950 LNCS, Springer, 2011, pp. 97–109, doi:<a href="https://doi.org/10.1007/978-3-642-24100-0_7">10.1007/978-3-642-24100-0_7</a>.
  short: D.-A. Alistarh, J. Aspnes, in:, Springer, 2011, pp. 97–109.
conference:
  name: 'DISC: Distributed Computing'
date_created: 2018-12-11T11:48:21Z
date_published: 2011-01-01T00:00:00Z
date_updated: 2023-02-23T13:12:01Z
day: '01'
doi: 10.1007/978-3-642-24100-0_7
extern: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 97 - 109
publication_status: published
publisher: Springer
publist_id: '6896'
status: public
title: Sub-logarithmic test-and-set against a weak adversary
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 6950 LNCS
year: '2011'
...
