---
_id: '3076'
abstract:
- lang: eng
  text: Auxin is a multifunctional hormone essential for plant development and pattern
    formation. A nuclear auxin-signaling system controlling auxin-induced gene expression
    is well established, but cytoplasmic auxin signaling, as in its coordination of
    cell polarization, is unexplored. We found a cytoplasmic auxin-signaling mechanism
    that modulates the interdigitated growth of Arabidopsis leaf epidermal pavement
    cells (PCs), which develop interdigitated lobes and indentations to form a puzzle-piece
    shape in a two-dimensional plane. PC interdigitation is compromised in leaves
    deficient in either auxin biosynthesis or its export mediated by PINFORMED 1 localized
    at the lobe tip. Auxin coordinately activates two Rho GTPases, ROP2 and ROP6,
    which promote the formation of complementary lobes and indentations, respectively.
    Activation of these ROPs by auxin occurs within 30 s and depends on AUXIN-BINDING
    PROTEIN 1. These findings reveal Rho GTPase-based auxin-signaling mechanisms,
    which modulate the spatial coordination of cell expansion across a field of cells.
author:
- first_name: Tongda
  full_name: Xu, Tongda
  last_name: Xu
- first_name: Mingzhang
  full_name: Wen, Mingzhang
  last_name: Wen
- first_name: Shingo
  full_name: Nagawa, Shingo
  last_name: Nagawa
- first_name: Ying
  full_name: Fu, Ying
  last_name: Fu
- first_name: Jin
  full_name: Chen, Jin-Gui
  last_name: Chen
- first_name: Ming
  full_name: Wu, Ming-Jing
  last_name: Wu
- first_name: Catherine
  full_name: Perrot-Rechenmann, Catherine
  last_name: Perrot Rechenmann
- first_name: Jirí
  full_name: Jirí Friml
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Alan
  full_name: Jones, Alan M
  last_name: Jones
- first_name: Zhenbiao
  full_name: Yang, Zhenbiao
  last_name: Yang
citation:
  ama: Xu T, Wen M, Nagawa S, et al. Cell surface- and Rho GTPase-based auxin signaling
    controls cellular interdigitation in Arabidopsis. <i>Cell</i>. 2010;143(1):99-110.
    doi:<a href="https://doi.org/10.1016/j.cell.2010.09.003">10.1016/j.cell.2010.09.003</a>
  apa: Xu, T., Wen, M., Nagawa, S., Fu, Y., Chen, J., Wu, M., … Yang, Z. (2010). Cell
    surface- and Rho GTPase-based auxin signaling controls cellular interdigitation
    in Arabidopsis. <i>Cell</i>. Cell Press. <a href="https://doi.org/10.1016/j.cell.2010.09.003">https://doi.org/10.1016/j.cell.2010.09.003</a>
  chicago: Xu, Tongda, Mingzhang Wen, Shingo Nagawa, Ying Fu, Jin Chen, Ming Wu, Catherine
    Perrot Rechenmann, Jiří Friml, Alan Jones, and Zhenbiao Yang. “Cell Surface- and
    Rho GTPase-Based Auxin Signaling Controls Cellular Interdigitation in Arabidopsis.”
    <i>Cell</i>. Cell Press, 2010. <a href="https://doi.org/10.1016/j.cell.2010.09.003">https://doi.org/10.1016/j.cell.2010.09.003</a>.
  ieee: T. Xu <i>et al.</i>, “Cell surface- and Rho GTPase-based auxin signaling controls
    cellular interdigitation in Arabidopsis,” <i>Cell</i>, vol. 143, no. 1. Cell Press,
    pp. 99–110, 2010.
  ista: Xu T, Wen M, Nagawa S, Fu Y, Chen J, Wu M, Perrot Rechenmann C, Friml J, Jones
    A, Yang Z. 2010. Cell surface- and Rho GTPase-based auxin signaling controls cellular
    interdigitation in Arabidopsis. Cell. 143(1), 99–110.
  mla: Xu, Tongda, et al. “Cell Surface- and Rho GTPase-Based Auxin Signaling Controls
    Cellular Interdigitation in Arabidopsis.” <i>Cell</i>, vol. 143, no. 1, Cell Press,
    2010, pp. 99–110, doi:<a href="https://doi.org/10.1016/j.cell.2010.09.003">10.1016/j.cell.2010.09.003</a>.
  short: T. Xu, M. Wen, S. Nagawa, Y. Fu, J. Chen, M. Wu, C. Perrot Rechenmann, J.
    Friml, A. Jones, Z. Yang, Cell 143 (2010) 99–110.
date_created: 2018-12-11T12:01:14Z
date_published: 2010-10-01T00:00:00Z
date_updated: 2021-01-12T07:40:53Z
day: '01'
doi: 10.1016/j.cell.2010.09.003
extern: 1
intvolume: '       143'
issue: '1'
month: '10'
page: 99 - 110
publication: Cell
publication_status: published
publisher: Cell Press
publist_id: '3625'
quality_controlled: 0
status: public
title: Cell surface- and Rho GTPase-based auxin signaling controls cellular interdigitation
  in Arabidopsis
type: journal_article
volume: 143
year: '2010'
...
---
_id: '3077'
author:
- first_name: Jirí
  full_name: Friml, Jirí
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Angharad
  full_name: Jones, Angharad
  last_name: Jones
citation:
  ama: 'Friml J, Jones A. Endoplasmic reticulum: The rising compartment in auxin biology.
    <i>Plant Physiology</i>. 2010;154(2):458-462. doi:<a href="https://doi.org/10.1104/pp.110.161380">10.1104/pp.110.161380</a>'
  apa: 'Friml, J., &#38; Jones, A. (2010). Endoplasmic reticulum: The rising compartment
    in auxin biology. <i>Plant Physiology</i>. American Society of Plant Biologists.
    <a href="https://doi.org/10.1104/pp.110.161380">https://doi.org/10.1104/pp.110.161380</a>'
  chicago: 'Friml, Jiří, and Angharad Jones. “Endoplasmic Reticulum: The Rising Compartment
    in Auxin Biology.” <i>Plant Physiology</i>. American Society of Plant Biologists,
    2010. <a href="https://doi.org/10.1104/pp.110.161380">https://doi.org/10.1104/pp.110.161380</a>.'
  ieee: 'J. Friml and A. Jones, “Endoplasmic reticulum: The rising compartment in
    auxin biology,” <i>Plant Physiology</i>, vol. 154, no. 2. American Society of
    Plant Biologists, pp. 458–462, 2010.'
  ista: 'Friml J, Jones A. 2010. Endoplasmic reticulum: The rising compartment in
    auxin biology. Plant Physiology. 154(2), 458–462.'
  mla: 'Friml, Jiří, and Angharad Jones. “Endoplasmic Reticulum: The Rising Compartment
    in Auxin Biology.” <i>Plant Physiology</i>, vol. 154, no. 2, American Society
    of Plant Biologists, 2010, pp. 458–62, doi:<a href="https://doi.org/10.1104/pp.110.161380">10.1104/pp.110.161380</a>.'
  short: J. Friml, A. Jones, Plant Physiology 154 (2010) 458–462.
date_created: 2018-12-11T12:01:14Z
date_published: 2010-10-01T00:00:00Z
date_updated: 2021-01-12T07:40:53Z
day: '01'
doi: 10.1104/pp.110.161380
extern: '1'
external_id:
  pmid:
  - '20921163'
intvolume: '       154'
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://www.ncbi.nlm.nih.gov/pubmed/20921163
month: '10'
oa: 1
oa_version: Published Version
page: 458 - 462
pmid: 1
publication: Plant Physiology
publication_status: published
publisher: American Society of Plant Biologists
publist_id: '3624'
status: public
title: 'Endoplasmic reticulum: The rising compartment in auxin biology'
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 154
year: '2010'
...
---
_id: '3078'
abstract:
- lang: eng
  text: Rapid advances in the field of plant biology, especially in plant cell biology,
    have created the need for methods that allow the localization of proteins in situ
    at subcellular resolution. Although in many cases recombinant proteins with fluorescent
    proteins can fulfill this task, antibody-based immunological detection of proteins
    is a complementary technique, which avoids the risk of inducing side effects by
    a fusion protein, such as misexpression, mistargeting, altered stability, or toxicity.
    Moreover, recombinant protein techniques are applicable only to a rather limited
    set of model plants. The immunolocalization protocols presented here can be used
    to display protein localization patterns in different tissues of various plant
    species. This chapter describes a whole mount immunolocalization protocol, which
    has been extensively used in Arabidopsis roots and some above-ground tissues,
    and that also works in other species. Additionally, for bulky or hard tissue types,
    a variation of this protocol for paraffin-embedded sections is given.
alternative_title:
- Methods in Molecular Biology
author:
- first_name: Michael
  full_name: Sauer, Michael
  last_name: Sauer
- first_name: Jirí
  full_name: Jirí Friml
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: 'Sauer M, Friml J. Immunolocalization of proteins in plants . In: Hennig L,
    Köhler C, eds. <i>Plant Developmental Biology</i>. Vol 655. Humana Press; 2010:253-263.
    doi:<a href="https://doi.org/10.1007/978-1-60761-765-5_17">10.1007/978-1-60761-765-5_17</a>'
  apa: Sauer, M., &#38; Friml, J. (2010). Immunolocalization of proteins in plants
    . In L. Hennig &#38; C. Köhler (Eds.), <i>Plant Developmental Biology</i> (Vol.
    655, pp. 253–263). Humana Press. <a href="https://doi.org/10.1007/978-1-60761-765-5_17">https://doi.org/10.1007/978-1-60761-765-5_17</a>
  chicago: Sauer, Michael, and Jiří Friml. “Immunolocalization of Proteins in Plants
    .” In <i>Plant Developmental Biology</i>, edited by Lars Hennig and Claudia Köhler,
    655:253–63. Humana Press, 2010. <a href="https://doi.org/10.1007/978-1-60761-765-5_17">https://doi.org/10.1007/978-1-60761-765-5_17</a>.
  ieee: M. Sauer and J. Friml, “Immunolocalization of proteins in plants ,” in <i>Plant
    Developmental Biology</i>, vol. 655, L. Hennig and C. Köhler, Eds. Humana Press,
    2010, pp. 253–263.
  ista: 'Sauer M, Friml J. 2010.Immunolocalization of proteins in plants . In: Plant
    Developmental Biology. Methods in Molecular Biology, vol. 655, 253–263.'
  mla: Sauer, Michael, and Jiří Friml. “Immunolocalization of Proteins in Plants .”
    <i>Plant Developmental Biology</i>, edited by Lars Hennig and Claudia Köhler,
    vol. 655, Humana Press, 2010, pp. 253–63, doi:<a href="https://doi.org/10.1007/978-1-60761-765-5_17">10.1007/978-1-60761-765-5_17</a>.
  short: M. Sauer, J. Friml, in:, L. Hennig, C. Köhler (Eds.), Plant Developmental
    Biology, Humana Press, 2010, pp. 253–263.
date_created: 2018-12-11T12:01:14Z
date_published: 2010-08-12T00:00:00Z
date_updated: 2021-01-12T07:40:53Z
day: '12'
doi: 10.1007/978-1-60761-765-5_17
editor:
- first_name: Lars
  full_name: Hennig, Lars
  last_name: Hennig
- first_name: Claudia
  full_name: Köhler, Claudia
  last_name: Köhler
extern: 1
intvolume: '       655'
month: '08'
page: 253 - 263
publication: Plant Developmental Biology
publication_status: published
publisher: Humana Press
publist_id: '3623'
quality_controlled: 0
status: public
title: 'Immunolocalization of proteins in plants '
type: book_chapter
volume: 655
year: '2010'
...
---
_id: '3079'
abstract:
- lang: eng
  text: Plant development is exceptionally flexible as manifested by its potential
    for organogenesis and regeneration, which are processes involving rearrangements
    of tissue polarities. Fundamental questions concern how individual cells can polarize
    in a coordinated manner to integrate into the multicellular context. In canalization
    models, the signaling molecule auxin acts as a polarizing cue, and feedback on
    the intercellular auxin flow is key for synchronized polarity rearrangements.
    We provide a novel mechanistic framework for canalization, based on up-to-date
    experimental data and minimal, biologically plausible assumptions. Our model combines
    the intracellular auxin signaling for expression of PINFORMED (PIN) auxin transporters
    and the theoretical postulation of extracellular auxin signaling for modulation
    of PIN subcellular dynamics. Computer simulations faithfully and robustly recapitulated
    the experimentally observed patterns of tissue polarity and asymmetric auxin distribution
    during formation and regeneration of vascular systems and during the competitive
    regulation of shoot branching by apical dominance. Additionally, our model generated
    new predictions that could be experimentally validated, highlighting a mechanistically
    conceivable explanation for the PIN polarization and canalization of the auxin
    flow in plants.
author:
- first_name: Krzysztof T
  full_name: Krzysztof Wabnik
  id: 4DE369A4-F248-11E8-B48F-1D18A9856A87
  last_name: Wabnik
  orcid: 0000-0001-7263-0560
- first_name: Jürgen
  full_name: Kleine-Vehn, Jürgen
  last_name: Kleine Vehn
- first_name: Jozef
  full_name: Balla, Jozef
  last_name: Balla
- first_name: Michael
  full_name: Sauer, Michael
  last_name: Sauer
- first_name: Satoshi
  full_name: Naramoto, Satoshi
  last_name: Naramoto
- first_name: Vilém
  full_name: Reinöhl, Vilém
  last_name: Reinöhl
- first_name: Roeland
  full_name: Merks, Roeland M
  last_name: Merks
- first_name: Willy
  full_name: Govaerts, Willy J
  last_name: Govaerts
- first_name: Jirí
  full_name: Jirí Friml
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Wabnik KT, Kleine Vehn J, Balla J, et al. Emergence of tissue polarization
    from synergy of intracellular and extracellular auxin signaling. <i>Molecular
    Systems Biology</i>. 2010;6. doi:<a href="https://doi.org/10.1038/msb.2010.103">10.1038/msb.2010.103</a>
  apa: Wabnik, K. T., Kleine Vehn, J., Balla, J., Sauer, M., Naramoto, S., Reinöhl,
    V., … Friml, J. (2010). Emergence of tissue polarization from synergy of intracellular
    and extracellular auxin signaling. <i>Molecular Systems Biology</i>. Nature Publishing
    Group. <a href="https://doi.org/10.1038/msb.2010.103">https://doi.org/10.1038/msb.2010.103</a>
  chicago: Wabnik, Krzysztof T, Jürgen Kleine Vehn, Jozef Balla, Michael Sauer, Satoshi
    Naramoto, Vilém Reinöhl, Roeland Merks, Willy Govaerts, and Jiří Friml. “Emergence
    of Tissue Polarization from Synergy of Intracellular and Extracellular Auxin Signaling.”
    <i>Molecular Systems Biology</i>. Nature Publishing Group, 2010. <a href="https://doi.org/10.1038/msb.2010.103">https://doi.org/10.1038/msb.2010.103</a>.
  ieee: K. T. Wabnik <i>et al.</i>, “Emergence of tissue polarization from synergy
    of intracellular and extracellular auxin signaling,” <i>Molecular Systems Biology</i>,
    vol. 6. Nature Publishing Group, 2010.
  ista: Wabnik KT, Kleine Vehn J, Balla J, Sauer M, Naramoto S, Reinöhl V, Merks R,
    Govaerts W, Friml J. 2010. Emergence of tissue polarization from synergy of intracellular
    and extracellular auxin signaling. Molecular Systems Biology. 6.
  mla: Wabnik, Krzysztof T., et al. “Emergence of Tissue Polarization from Synergy
    of Intracellular and Extracellular Auxin Signaling.” <i>Molecular Systems Biology</i>,
    vol. 6, Nature Publishing Group, 2010, doi:<a href="https://doi.org/10.1038/msb.2010.103">10.1038/msb.2010.103</a>.
  short: K.T. Wabnik, J. Kleine Vehn, J. Balla, M. Sauer, S. Naramoto, V. Reinöhl,
    R. Merks, W. Govaerts, J. Friml, Molecular Systems Biology 6 (2010).
date_created: 2018-12-11T12:01:15Z
date_published: 2010-12-21T00:00:00Z
date_updated: 2021-01-12T07:40:54Z
day: '21'
doi: 10.1038/msb.2010.103
extern: 1
intvolume: '         6'
month: '12'
publication: Molecular Systems Biology
publication_status: published
publisher: Nature Publishing Group
publist_id: '3622'
quality_controlled: 0
status: public
title: Emergence of tissue polarization from synergy of intracellular and extracellular
  auxin signaling
type: journal_article
volume: 6
year: '2010'
...
---
_id: '3080'
abstract:
- lang: eng
  text: Auxin is an essential plant-specific regulator of patterning processes that
    also controls directional growth of roots and shoots. In response to gravity stimulation,
    the PIN3 auxin transporter polarizes to the bottomside of gravity-sensing root
    cells, presumably redirecting the auxin flux toward the lower side of the root
    and triggering gravitropic bending. By combining live-cell imaging techniques
    with pharmacological and genetic approaches, we demonstrate that PIN3 polarization
    does not require secretion of de novo synthesized proteins or protein degradation,
    but instead involves rapid, transient stimulation of PIN endocytosis, presumably
    via a clathrin-dependent pathway. Moreover, gravity-induced PIN3 polarization
    requires the activity of the guanine nucleotide exchange factors for ARF GTPases
    (ARF-GEF) GNOM-dependent polar-targeting path-ways and might involve endosome-based
    PIN3 translocation from one cell side to another. Our data suggest that gravity
    perception acts at several instances of PIN3 trafficking, ultimately leading to
    the polarization of PIN3, which presumably aligns auxin fluxes with gravity vector
    and mediates downstream root gravitropic response.
author:
- first_name: Jürgen
  full_name: Kleine-Vehn, Jürgen
  last_name: Kleine Vehn
- first_name: Zhaojun
  full_name: Ding, Zhaojun
  last_name: Ding
- first_name: Angharad
  full_name: Jones, Angharad R
  last_name: Jones
- first_name: Masao
  full_name: Tasaka, Masao
  last_name: Tasaka
- first_name: Miyo
  full_name: Morita, Miyo T
  last_name: Morita
- first_name: Jirí
  full_name: Jirí Friml
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Kleine Vehn J, Ding Z, Jones A, Tasaka M, Morita M, Friml J. Gravity induced
    PIN transcytosis for polarization of auxin fluxes in gravity sensing root cells.
    <i>PNAS</i>. 2010;107(51):22344-22349. doi:<a href="https://doi.org/10.1073/pnas.1013145107">10.1073/pnas.1013145107</a>
  apa: Kleine Vehn, J., Ding, Z., Jones, A., Tasaka, M., Morita, M., &#38; Friml,
    J. (2010). Gravity induced PIN transcytosis for polarization of auxin fluxes in
    gravity sensing root cells. <i>PNAS</i>. National Academy of Sciences. <a href="https://doi.org/10.1073/pnas.1013145107">https://doi.org/10.1073/pnas.1013145107</a>
  chicago: Kleine Vehn, Jürgen, Zhaojun Ding, Angharad Jones, Masao Tasaka, Miyo Morita,
    and Jiří Friml. “Gravity Induced PIN Transcytosis for Polarization of Auxin Fluxes
    in Gravity Sensing Root Cells.” <i>PNAS</i>. National Academy of Sciences, 2010.
    <a href="https://doi.org/10.1073/pnas.1013145107">https://doi.org/10.1073/pnas.1013145107</a>.
  ieee: J. Kleine Vehn, Z. Ding, A. Jones, M. Tasaka, M. Morita, and J. Friml, “Gravity
    induced PIN transcytosis for polarization of auxin fluxes in gravity sensing root
    cells,” <i>PNAS</i>, vol. 107, no. 51. National Academy of Sciences, pp. 22344–22349,
    2010.
  ista: Kleine Vehn J, Ding Z, Jones A, Tasaka M, Morita M, Friml J. 2010. Gravity
    induced PIN transcytosis for polarization of auxin fluxes in gravity sensing root
    cells. PNAS. 107(51), 22344–22349.
  mla: Kleine Vehn, Jürgen, et al. “Gravity Induced PIN Transcytosis for Polarization
    of Auxin Fluxes in Gravity Sensing Root Cells.” <i>PNAS</i>, vol. 107, no. 51,
    National Academy of Sciences, 2010, pp. 22344–49, doi:<a href="https://doi.org/10.1073/pnas.1013145107">10.1073/pnas.1013145107</a>.
  short: J. Kleine Vehn, Z. Ding, A. Jones, M. Tasaka, M. Morita, J. Friml, PNAS 107
    (2010) 22344–22349.
date_created: 2018-12-11T12:01:15Z
date_published: 2010-12-21T00:00:00Z
date_updated: 2021-01-12T07:40:55Z
day: '21'
doi: 10.1073/pnas.1013145107
extern: 1
intvolume: '       107'
issue: '51'
month: '12'
page: 22344 - 22349
publication: PNAS
publication_status: published
publisher: National Academy of Sciences
publist_id: '3620'
quality_controlled: 0
status: public
title: Gravity induced PIN transcytosis for polarization of auxin fluxes in gravity
  sensing root cells
type: journal_article
volume: 107
year: '2010'
...
---
_id: '3081'
abstract:
- lang: eng
  text: Endocytosis is crucial for various cellular functions and development of multicellular
    organisms. In mammals and yeast, ADP-ribosylation factor (ARF) GTPases, key components
    of vesicle formation, and their regulators ARF-guanine nucleotide exchange factors
    (GEFs) and ARF-GTPase-activating protein (GAPs) mediate endocytosis. A similar
    role has not been established in plants,mainly because of the lack of the canonical
    ARF and ARF-GEF components that are involved in endocytosis in other eukaryotes.
    In this study, we revealed a regulatory mechanism of endocytosis in plants based
    on ARF GTPase activity.Weidentified that ARF-GEFGNOMand ARF-GAP VASCULAR NETWORK
    DEFECTIVE 3 (VAN3), both of which are involved in polar auxin transport-dependent
    morphogenesis, localize at the plasma membranes as well as in intracellular structures.
    Variable angle epifluorescence microscopy revealed that GNOM and VAN3 localize
    to partially overlapping discrete foci at the plasmamembranes that are regularly
    associated with the endocytic vesicle coat clathrin. Genetic studies revealed
    that GNOM and VAN3 activities are required for endocytosis and internalization
    of plasma membrane proteins, including PIN-FORMED auxin transporters. These findings
    identified ARF GTPase-based regulatory mechanisms for endocytosis in plants. GNOMand
    VAN3 previously were proposed to function solely at the recycling endosomes and
    trans-Golgi networks, respectively. Therefore our findings uncovered an additional
    cellular function of these prominent developmental regulators.
author:
- first_name: Satoshi
  full_name: Naramoto, Satoshi
  last_name: Naramoto
- first_name: Jürgen
  full_name: Kleine-Vehn, Jürgen
  last_name: Kleine Vehn
- first_name: Stéphanie
  full_name: Robert, Stéphanie
  last_name: Robert
- first_name: Masaru
  full_name: Fujimoto, Masaru
  last_name: Fujimoto
- first_name: Tomoko
  full_name: Dainobu, Tomoko
  last_name: Dainobu
- first_name: Tomasz
  full_name: Paciorek, Tomasz
  last_name: Paciorek
- first_name: Takashi
  full_name: Ueda, Takashi
  last_name: Ueda
- first_name: Akihiko
  full_name: Nakano, Akihiko
  last_name: Nakano
- first_name: Marc
  full_name: Van Montagu, Marc C
  last_name: Van Montagu
- first_name: Hiroo
  full_name: Fukuda, Hiroo
  last_name: Fukuda
- first_name: Jirí
  full_name: Jirí Friml
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Naramoto S, Kleine Vehn J, Robert S, et al. ADP ribosylation factor machinery
    mediates endocytosis in plant cells. <i>PNAS</i>. 2010;107(50):21890-21895. doi:<a
    href="https://doi.org/10.1073/pnas.1016260107">10.1073/pnas.1016260107</a>
  apa: Naramoto, S., Kleine Vehn, J., Robert, S., Fujimoto, M., Dainobu, T., Paciorek,
    T., … Friml, J. (2010). ADP ribosylation factor machinery mediates endocytosis
    in plant cells. <i>PNAS</i>. National Academy of Sciences. <a href="https://doi.org/10.1073/pnas.1016260107">https://doi.org/10.1073/pnas.1016260107</a>
  chicago: Naramoto, Satoshi, Jürgen Kleine Vehn, Stéphanie Robert, Masaru Fujimoto,
    Tomoko Dainobu, Tomasz Paciorek, Takashi Ueda, et al. “ADP Ribosylation Factor
    Machinery Mediates Endocytosis in Plant Cells.” <i>PNAS</i>. National Academy
    of Sciences, 2010. <a href="https://doi.org/10.1073/pnas.1016260107">https://doi.org/10.1073/pnas.1016260107</a>.
  ieee: S. Naramoto <i>et al.</i>, “ADP ribosylation factor machinery mediates endocytosis
    in plant cells,” <i>PNAS</i>, vol. 107, no. 50. National Academy of Sciences,
    pp. 21890–21895, 2010.
  ista: Naramoto S, Kleine Vehn J, Robert S, Fujimoto M, Dainobu T, Paciorek T, Ueda
    T, Nakano A, Van Montagu M, Fukuda H, Friml J. 2010. ADP ribosylation factor machinery
    mediates endocytosis in plant cells. PNAS. 107(50), 21890–21895.
  mla: Naramoto, Satoshi, et al. “ADP Ribosylation Factor Machinery Mediates Endocytosis
    in Plant Cells.” <i>PNAS</i>, vol. 107, no. 50, National Academy of Sciences,
    2010, pp. 21890–95, doi:<a href="https://doi.org/10.1073/pnas.1016260107">10.1073/pnas.1016260107</a>.
  short: S. Naramoto, J. Kleine Vehn, S. Robert, M. Fujimoto, T. Dainobu, T. Paciorek,
    T. Ueda, A. Nakano, M. Van Montagu, H. Fukuda, J. Friml, PNAS 107 (2010) 21890–21895.
date_created: 2018-12-11T12:01:15Z
date_published: 2010-12-14T00:00:00Z
date_updated: 2021-01-12T07:40:55Z
day: '14'
doi: 10.1073/pnas.1016260107
extern: 1
intvolume: '       107'
issue: '50'
month: '12'
page: 21890 - 21895
publication: PNAS
publication_status: published
publisher: National Academy of Sciences
publist_id: '3621'
quality_controlled: 0
status: public
title: ADP ribosylation factor machinery mediates endocytosis in plant cells
type: journal_article
volume: 107
year: '2010'
...
---
_id: '12199'
abstract:
- lang: eng
  text: The four microsporangia of the flowering plant anther develop from archesporial
    cells in the L2 of the primordium. Within each microsporangium, developing microsporocytes
    are surrounded by concentric monolayers of tapetal, middle layer and endothecial
    cells. How this intricate array of tissues, each containing relatively few cells,
    is established in an organ possessing no formal meristems is poorly understood.
    We describe here the pivotal role of the LRR receptor kinase EXCESS MICROSPOROCYTES
    1 (EMS1) in forming the monolayer of tapetal nurse cells in Arabidopsis. Unusually
    for plants, tapetal cells are specified very early in development, and are subsequently
    stimulated to proliferate by a receptor-like kinase (RLK) complex that includes
    EMS1. Mutations in members of this EMS1 signalling complex and its putative ligand
    result in male-sterile plants in which tapetal initials fail to proliferate. Surprisingly,
    these cells continue to develop, isolated at the locular periphery. Mutant and
    wild-type microsporangia expand at similar rates and the ‘tapetal’ space at the
    periphery of mutant locules becomes occupied by microsporocytes. However, induction
    of late expression of EMS1 in the few tapetal initials in ems1 plants results
    in their proliferation to generate a functional tapetum, and this proliferation
    suppresses microsporocyte number. Our experiments also show that integrity of
    the tapetal monolayer is crucial for the maintenance of the polarity of divisions
    within it. This unexpected autonomy of the tapetal ‘lineage’ is discussed in the
    context of tissue development in complex plant organs, where constancy in size,
    shape and cell number is crucial.
acknowledgement: 'We thank the following for providing mutant lines and reagents:
  Hong Ma, De Ye, Sacco De Vries, and Rod Scott for providing the pA9::Barnase lines
  and information on A9 expression patterns. Carla Galinha and Paolo Piazza gave valuable
  help with in situ hybridisation and qRT-PCR, respectively, and we acknowledge Qing
  Zhang, Helen Prescott and Matthew Dicks for providing excellent technical assistance.
  We are indebted to Miltos Tsiantis and Angela Hay for helpful discussion, and the
  research was funded by Oxford University through a Clarendon Scholarship to X.F.,
  with additional financial support from Magdalen College (Oxford).'
article_processing_charge: No
article_type: original
author:
- first_name: Xiaoqi
  full_name: Feng, Xiaoqi
  id: e0164712-22ee-11ed-b12a-d80fcdf35958
  last_name: Feng
  orcid: 0000-0002-4008-1234
- first_name: Hugh G.
  full_name: Dickinson, Hugh G.
  last_name: Dickinson
citation:
  ama: Feng X, Dickinson HG. Tapetal cell fate, lineage and proliferation in the Arabidopsis
    anther. <i>Development</i>. 2010;137(14):2409-2416. doi:<a href="https://doi.org/10.1242/dev.049320">10.1242/dev.049320</a>
  apa: Feng, X., &#38; Dickinson, H. G. (2010). Tapetal cell fate, lineage and proliferation
    in the Arabidopsis anther. <i>Development</i>. The Company of Biologists. <a href="https://doi.org/10.1242/dev.049320">https://doi.org/10.1242/dev.049320</a>
  chicago: Feng, Xiaoqi, and Hugh G. Dickinson. “Tapetal Cell Fate, Lineage and Proliferation
    in the Arabidopsis Anther.” <i>Development</i>. The Company of Biologists, 2010.
    <a href="https://doi.org/10.1242/dev.049320">https://doi.org/10.1242/dev.049320</a>.
  ieee: X. Feng and H. G. Dickinson, “Tapetal cell fate, lineage and proliferation
    in the Arabidopsis anther,” <i>Development</i>, vol. 137, no. 14. The Company
    of Biologists, pp. 2409–2416, 2010.
  ista: Feng X, Dickinson HG. 2010. Tapetal cell fate, lineage and proliferation in
    the Arabidopsis anther. Development. 137(14), 2409–2416.
  mla: Feng, Xiaoqi, and Hugh G. Dickinson. “Tapetal Cell Fate, Lineage and Proliferation
    in the Arabidopsis Anther.” <i>Development</i>, vol. 137, no. 14, The Company
    of Biologists, 2010, pp. 2409–16, doi:<a href="https://doi.org/10.1242/dev.049320">10.1242/dev.049320</a>.
  short: X. Feng, H.G. Dickinson, Development 137 (2010) 2409–2416.
date_created: 2023-01-16T09:21:54Z
date_published: 2010-07-15T00:00:00Z
date_updated: 2023-05-08T10:57:11Z
day: '15'
department:
- _id: XiFe
doi: 10.1242/dev.049320
extern: '1'
external_id:
  pmid:
  - '20570940'
intvolume: '       137'
issue: '14'
keyword:
- Developmental Biology
- Molecular Biology
- Anther Tapetum
- Arabidopsis
- Cell Fate Establishment
- EMS1
- Reproductive Cell Lineage
language:
- iso: eng
month: '07'
oa_version: None
page: 2409-2416
pmid: 1
publication: Development
publication_identifier:
  issn:
  - 1477-9129
  - 0950-1991
publication_status: published
publisher: The Company of Biologists
quality_controlled: '1'
scopus_import: '1'
status: public
title: Tapetal cell fate, lineage and proliferation in the Arabidopsis anther
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 137
year: '2010'
...
---
_id: '12200'
abstract:
- lang: eng
  text: Key steps in the evolution of the angiosperm anther include the patterning
    of the concentrically organized microsporangium and the incorporation of four
    such microsporangia into a leaf-like structure. Mutant studies in the model plant
    Arabidopsis thaliana are leading to an increasingly accurate picture of (i) the
    cell lineages culminating in the different cell types present in the microsporangium
    (the microsporocytes, the tapetum, and the middle and endothecial layers), and
    (ii) some of the genes responsible for specifying their fates. However, the processes
    that confer polarity on the developing anther and position the microsporangia
    within it remain unclear. Certainly, data from a range of experimental strategies
    suggest that hormones play a central role in establishing polarity and the patterning
    of the anther initial, and may be responsible for locating the microsporangia.
    But the fact that microsporangia were originally positioned externally suggests
    that their development is likely to be autonomous, perhaps with the reproductive
    cells generating signals controlling the growth and division of the investing
    anther epidermis. These possibilities are discussed in the context of the expression
    of genes which initiate and maintain male and female reproductive development,
    and in the perspective of our current views of anther evolution.
article_processing_charge: No
article_type: original
author:
- first_name: Xiaoqi
  full_name: Feng, Xiaoqi
  id: e0164712-22ee-11ed-b12a-d80fcdf35958
  last_name: Feng
  orcid: 0000-0002-4008-1234
- first_name: Hugh G.
  full_name: Dickinson, Hugh G.
  last_name: Dickinson
citation:
  ama: Feng X, Dickinson HG. Cell–cell interactions during patterning of the <i>Arabidopsis</i>
    anther. <i>Biochemical Society Transactions</i>. 2010;38(2):571-576. doi:<a href="https://doi.org/10.1042/bst0380571">10.1042/bst0380571</a>
  apa: Feng, X., &#38; Dickinson, H. G. (2010). Cell–cell interactions during patterning
    of the <i>Arabidopsis</i> anther. <i>Biochemical Society Transactions</i>. Portland
    Press Ltd. <a href="https://doi.org/10.1042/bst0380571">https://doi.org/10.1042/bst0380571</a>
  chicago: Feng, Xiaoqi, and Hugh G. Dickinson. “Cell–Cell Interactions during Patterning
    of the <i>Arabidopsis</i> Anther.” <i>Biochemical Society Transactions</i>. Portland
    Press Ltd., 2010. <a href="https://doi.org/10.1042/bst0380571">https://doi.org/10.1042/bst0380571</a>.
  ieee: X. Feng and H. G. Dickinson, “Cell–cell interactions during patterning of
    the <i>Arabidopsis</i> anther,” <i>Biochemical Society Transactions</i>, vol.
    38, no. 2. Portland Press Ltd., pp. 571–576, 2010.
  ista: Feng X, Dickinson HG. 2010. Cell–cell interactions during patterning of the
    <i>Arabidopsis</i> anther. Biochemical Society Transactions. 38(2), 571–576.
  mla: Feng, Xiaoqi, and Hugh G. Dickinson. “Cell–Cell Interactions during Patterning
    of the <i>Arabidopsis</i> Anther.” <i>Biochemical Society Transactions</i>, vol.
    38, no. 2, Portland Press Ltd., 2010, pp. 571–76, doi:<a href="https://doi.org/10.1042/bst0380571">10.1042/bst0380571</a>.
  short: X. Feng, H.G. Dickinson, Biochemical Society Transactions 38 (2010) 571–576.
date_created: 2023-01-16T09:22:18Z
date_published: 2010-03-22T00:00:00Z
date_updated: 2023-05-08T10:57:59Z
day: '22'
department:
- _id: XiFe
doi: 10.1042/bst0380571
extern: '1'
external_id:
  pmid:
  - '20298223'
intvolume: '        38'
issue: '2'
keyword:
- Biochemistry
- Anther Development
- Arabidopsis
- Cell Fate
- Microsporangium
- Polarity
- Receptor Kinase
language:
- iso: eng
month: '03'
oa_version: None
page: 571-576
pmid: 1
publication: Biochemical Society Transactions
publication_identifier:
  issn:
  - 0300-5127
  - 1470-8752
publication_status: published
publisher: Portland Press Ltd.
quality_controlled: '1'
scopus_import: '1'
status: public
title: Cell–cell interactions during patterning of the <i>Arabidopsis</i> anther
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 38
year: '2010'
...
---
_id: '12653'
abstract:
- lang: eng
  text: 'Daily streamflow from stations close to five Swiss glaciers is analyzed for
    trends with the Mann-Kendall test. We consider a common period of record (1974–2004)
    and longer periods based on data availability. The trend statistical significance
    is tested on annual and seasonal bases. We also examine changes in precipitation,
    temperature, and snow cover characteristics. Highly glacierized basins show statistically
    significant positive trends in annual streamflow caused by increasing streamflow
    in spring and summer. Trends are more numerous and stronger at lower and mid than
    at the upper quantiles. The basin characterized by lower glacier coverage, conversely,
    does not exhibit consistently statistically significant trends. Changes in precipitation
    are not sufficient to explain the observed streamflow trends. Air temperature
    sees an increase in mean, minimum, and maximum values at all sites. Variations
    in the seasonal snow accumulation and ablation process are evident. Solid precipitation
    is decreasing at all sites and trends may be due to a shift from snowfall into
    rainfall. Mean snow depth is also decreasing, and its duration is getting shorter
    because of a decrease in solid precipitation and enhanced melting. Trend magnitude
    attenuates with longer time series. Contrasting trends are detected for different
    subperiods in the last 70 years: statistically significant negative trends are
    observed in the periods 1944–1974 and 1954–1984 for Aletschgletscher, in contrast
    with the results for the common period. These trends are explained by different
    rates of ice volume changes, and the sign of trends is clearly related to phases
    of positive or negative glacier mass balance.'
article_number: W10522
article_processing_charge: No
article_type: original
author:
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
  orcid: 0000-0002-5554-8087
- first_name: A.
  full_name: Bauder, A.
  last_name: Bauder
- first_name: M.
  full_name: Parola, M.
  last_name: Parola
citation:
  ama: Pellicciotti F, Bauder A, Parola M. Effect of glaciers on streamflow trends
    in the Swiss Alps. <i>Water Resources Research</i>. 2010;46(10). doi:<a href="https://doi.org/10.1029/2009wr009039">10.1029/2009wr009039</a>
  apa: Pellicciotti, F., Bauder, A., &#38; Parola, M. (2010). Effect of glaciers on
    streamflow trends in the Swiss Alps. <i>Water Resources Research</i>. American
    Geophysical Union. <a href="https://doi.org/10.1029/2009wr009039">https://doi.org/10.1029/2009wr009039</a>
  chicago: Pellicciotti, Francesca, A. Bauder, and M. Parola. “Effect of Glaciers
    on Streamflow Trends in the Swiss Alps.” <i>Water Resources Research</i>. American
    Geophysical Union, 2010. <a href="https://doi.org/10.1029/2009wr009039">https://doi.org/10.1029/2009wr009039</a>.
  ieee: F. Pellicciotti, A. Bauder, and M. Parola, “Effect of glaciers on streamflow
    trends in the Swiss Alps,” <i>Water Resources Research</i>, vol. 46, no. 10. American
    Geophysical Union, 2010.
  ista: Pellicciotti F, Bauder A, Parola M. 2010. Effect of glaciers on streamflow
    trends in the Swiss Alps. Water Resources Research. 46(10), W10522.
  mla: Pellicciotti, Francesca, et al. “Effect of Glaciers on Streamflow Trends in
    the Swiss Alps.” <i>Water Resources Research</i>, vol. 46, no. 10, W10522, American
    Geophysical Union, 2010, doi:<a href="https://doi.org/10.1029/2009wr009039">10.1029/2009wr009039</a>.
  short: F. Pellicciotti, A. Bauder, M. Parola, Water Resources Research 46 (2010).
date_created: 2023-02-20T08:18:27Z
date_published: 2010-10-01T00:00:00Z
date_updated: 2024-10-14T12:00:48Z
day: '01'
doi: 10.1029/2009wr009039
extern: '1'
intvolume: '        46'
issue: '10'
keyword:
- Water Science and Technology
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1029/2009WR009039
month: '10'
oa: 1
oa_version: Published Version
publication: Water Resources Research
publication_identifier:
  eissn:
  - 1944-7973
  issn:
  - 0043-1397
publication_status: published
publisher: American Geophysical Union
quality_controlled: '1'
scopus_import: '1'
status: public
title: Effect of glaciers on streamflow trends in the Swiss Alps
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 46
year: '2010'
...
---
_id: '1300'
abstract:
- lang: eng
  text: 'Motion vision is a major function of all visual systems, yet the underlying
    neural mechanisms and circuits are still elusive. In the lamina, the first optic
    neuropile of Drosophila melanogaster, photoreceptor signals split into five parallel
    pathways, L1-L5. Here we examine how these pathways contribute to visual motion
    detection by combining genetic block and reconstitution of neural activity in
    different lamina cell types with whole-cell recordings from downstream motion-sensitive
    neurons. We find reduced responses to moving gratings if L1 or L2 is blocked;
    however, reconstitution of photoreceptor input to only L1 or L2 results in wild-type
    responses. Thus, the first experiment indicates the necessity of both pathways,
    whereas the second indicates sufficiency of each single pathway. This contradiction
    can be explained by electrical coupling between L1 and L2, allowing for activation
    of both pathways even when only one of them receives photoreceptor input. A fundamental
    difference between the L1 pathway and the L2 pathway is uncovered when blocking
    L1 or L2 output while presenting moving edges of positive (ON) or negative (OFF)
    contrast polarity: blocking L1 eliminates the response to moving ON edges, whereas
    blocking L2 eliminates the response to moving OFF edges. Thus, similar to the
    segregation of photoreceptor signals in ON and OFF bipolar cell pathways in the
    vertebrate retina, photoreceptor signals segregate into ON-L1 and OFF-L2 channels
    in the lamina of Drosophila.'
author:
- first_name: Maximilian A
  full_name: Maximilian Jösch
  id: 2BD278E6-F248-11E8-B48F-1D18A9856A87
  last_name: Jösch
  orcid: 0000-0002-3937-1330
- first_name: Bettina
  full_name: Schnell, Bettina
  last_name: Schnell
- first_name: Shamprasad
  full_name: Raghu, Shamprasad V
  last_name: Raghu
- first_name: Dierk
  full_name: Reiff, Dierk F
  last_name: Reiff
- first_name: Alexander
  full_name: Borst, Alexander
  last_name: Borst
citation:
  ama: Jösch MA, Schnell B, Raghu S, Reiff D, Borst A. ON and off pathways in Drosophila
    motion vision. <i>Nature</i>. 2010;468(7321):300-304. doi:<a href="https://doi.org/10.1038/nature09545">10.1038/nature09545</a>
  apa: Jösch, M. A., Schnell, B., Raghu, S., Reiff, D., &#38; Borst, A. (2010). ON
    and off pathways in Drosophila motion vision. <i>Nature</i>. Nature Publishing
    Group. <a href="https://doi.org/10.1038/nature09545">https://doi.org/10.1038/nature09545</a>
  chicago: Jösch, Maximilian A, Bettina Schnell, Shamprasad Raghu, Dierk Reiff, and
    Alexander Borst. “ON and off Pathways in Drosophila Motion Vision.” <i>Nature</i>.
    Nature Publishing Group, 2010. <a href="https://doi.org/10.1038/nature09545">https://doi.org/10.1038/nature09545</a>.
  ieee: M. A. Jösch, B. Schnell, S. Raghu, D. Reiff, and A. Borst, “ON and off pathways
    in Drosophila motion vision,” <i>Nature</i>, vol. 468, no. 7321. Nature Publishing
    Group, pp. 300–304, 2010.
  ista: Jösch MA, Schnell B, Raghu S, Reiff D, Borst A. 2010. ON and off pathways
    in Drosophila motion vision. Nature. 468(7321), 300–304.
  mla: Jösch, Maximilian A., et al. “ON and off Pathways in Drosophila Motion Vision.”
    <i>Nature</i>, vol. 468, no. 7321, Nature Publishing Group, 2010, pp. 300–04,
    doi:<a href="https://doi.org/10.1038/nature09545">10.1038/nature09545</a>.
  short: M.A. Jösch, B. Schnell, S. Raghu, D. Reiff, A. Borst, Nature 468 (2010) 300–304.
date_created: 2018-12-11T11:51:14Z
date_published: 2010-11-11T00:00:00Z
date_updated: 2021-01-12T06:49:44Z
day: '11'
doi: 10.1038/nature09545
extern: 1
intvolume: '       468'
issue: '7321'
month: '11'
page: 300 - 304
publication: Nature
publication_status: published
publisher: Nature Publishing Group
publist_id: '5970'
quality_controlled: 0
status: public
title: ON and off pathways in Drosophila motion vision
type: journal_article
volume: 468
year: '2010'
...
---
_id: '1301'
abstract:
- lang: eng
  text: Motion vision is essential for navigating through the environment. Due to
    its genetic amenability, the fruit fly Drosophila has been serving for a lengthy
    period as a model organism for studying optomotor behavior as elicited by large-field
    horizontal motion. However, the neurons underlying the control of this behavior
    have not been studied in Drosophila so far. Here we report the first whole cell
    recordings from three cells of the horizontal system (HSN, HSE, and HSS) in the
    lobula plate of Drosophila. All three HS cells are tuned to large-field horizontal
    motion in a direction-selective way; they become excited by front-to-back motion
    and inhibited by back-to-front motion in the ipsilateral field of view. The response
    properties of HS cells such as contrast and velocity dependence are in accordance
    with the correlation-type model of motion detection. Neurobiotin injection suggests
    extensive coupling among ipsilateral HS cells and additional coupling to tangential
    cells that have their dendrites in the contralateral hemisphere of the brain.
    This connectivity scheme accounts for the complex layout of their receptive fields
    and explains their sensitivity both to ipsilateral and to contralateral motion.
    Thus the main response properties of Drosophila HS cells are strikingly similar
    to the responses of their counterparts in the blowfly Calliphora, although we
    found substantial differences with respect to their dendritic structure and connectivity.
    This long-awaited functional characterization of HS cells in Drosophila provides
    the basis for the future dissection of optomotor behavior and the underlying neural
    circuitry by combining genetics, physiology, and behavior.
acknowledgement: This work was supported by the Max-Planck-Society and by a Human
  Frontier Science Program grant to K. Ito, A. Borst, and B. Nelson.
article_processing_charge: No
article_type: original
author:
- first_name: Bettina
  full_name: Schnell, Bettina
  last_name: Schnell
- first_name: Maximilian A
  full_name: Jösch, Maximilian A
  id: 2BD278E6-F248-11E8-B48F-1D18A9856A87
  last_name: Jösch
  orcid: 0000-0002-3937-1330
- first_name: Friedrich
  full_name: Förstner, Friedrich
  last_name: Förstner
- first_name: Shamprasad
  full_name: Raghu, Shamprasad
  last_name: Raghu
- first_name: Hideo
  full_name: Otsuna, Hideo
  last_name: Otsuna
- first_name: Kei
  full_name: Ito, Kei
  last_name: Ito
- first_name: Alexander
  full_name: Borst, Alexander
  last_name: Borst
- first_name: Dierk
  full_name: Reiff, Dierk
  last_name: Reiff
citation:
  ama: Schnell B, Jösch MA, Förstner F, et al. Processing of horizontal optic flow
    in three visual interneurons of the Drosophila brain. <i>Journal of Neurophysiology</i>.
    2010;103(3):1646-1657. doi:<a href="https://doi.org/10.1152/jn.00950.2009">10.1152/jn.00950.2009</a>
  apa: Schnell, B., Jösch, M. A., Förstner, F., Raghu, S., Otsuna, H., Ito, K., …
    Reiff, D. (2010). Processing of horizontal optic flow in three visual interneurons
    of the Drosophila brain. <i>Journal of Neurophysiology</i>. American Physiological
    Society. <a href="https://doi.org/10.1152/jn.00950.2009">https://doi.org/10.1152/jn.00950.2009</a>
  chicago: Schnell, Bettina, Maximilian A Jösch, Friedrich Förstner, Shamprasad Raghu,
    Hideo Otsuna, Kei Ito, Alexander Borst, and Dierk Reiff. “Processing of Horizontal
    Optic Flow in Three Visual Interneurons of the Drosophila Brain.” <i>Journal of
    Neurophysiology</i>. American Physiological Society, 2010. <a href="https://doi.org/10.1152/jn.00950.2009">https://doi.org/10.1152/jn.00950.2009</a>.
  ieee: B. Schnell <i>et al.</i>, “Processing of horizontal optic flow in three visual
    interneurons of the Drosophila brain,” <i>Journal of Neurophysiology</i>, vol.
    103, no. 3. American Physiological Society, pp. 1646–1657, 2010.
  ista: Schnell B, Jösch MA, Förstner F, Raghu S, Otsuna H, Ito K, Borst A, Reiff
    D. 2010. Processing of horizontal optic flow in three visual interneurons of the
    Drosophila brain. Journal of Neurophysiology. 103(3), 1646–1657.
  mla: Schnell, Bettina, et al. “Processing of Horizontal Optic Flow in Three Visual
    Interneurons of the Drosophila Brain.” <i>Journal of Neurophysiology</i>, vol.
    103, no. 3, American Physiological Society, 2010, pp. 1646–57, doi:<a href="https://doi.org/10.1152/jn.00950.2009">10.1152/jn.00950.2009</a>.
  short: B. Schnell, M.A. Jösch, F. Förstner, S. Raghu, H. Otsuna, K. Ito, A. Borst,
    D. Reiff, Journal of Neurophysiology 103 (2010) 1646–1657.
date_created: 2018-12-11T11:51:14Z
date_published: 2010-03-01T00:00:00Z
date_updated: 2021-01-12T06:49:44Z
day: '01'
doi: 10.1152/jn.00950.2009
extern: '1'
external_id:
  pmid:
  - '20089816'
intvolume: '       103'
issue: '3'
language:
- iso: eng
month: '03'
oa_version: None
page: 1646 - 1657
pmid: 1
publication: Journal of Neurophysiology
publication_identifier:
  eissn:
  - 1522-1598
  issn:
  - ' 0022-3077'
publication_status: published
publisher: American Physiological Society
publist_id: '5971'
quality_controlled: '1'
status: public
title: Processing of horizontal optic flow in three visual interneurons of the Drosophila
  brain
type: journal_article
user_id: D865714E-FA4E-11E9-B85B-F5C5E5697425
volume: 103
year: '2010'
...
---
_id: '2095'
abstract:
- lang: eng
  text: This paper describes a passive stereo system for capturing the 3D geometry
    of a face in a single-shot under standard light sources. The system is low-cost
    and easy to deploy. Results are submillimeter accurate and commensurate with those
    from state-ofthe-art systems based on active lighting, and the models meet the
    quality requirements of a demanding domain like the movie industry. Recovered
    models are shown for captures from both high-end cameras in a studio setting and
    from a consumer binocular-stereo camera, demonstrating scalability across a spectrum
    of camera deployments, and showing the potential for 3D face modeling to move
    beyond the professional arena and into the emerging consumer market in stereoscopic
    photography. Our primary technical contribution is a modification of standard
    stereo refinement methods to capture pore-scale geometry, using a qualitative
    approach that produces visually realistic results. The second technical contribution
    is a calibration method suited to face capture systems. The systemic contribution
    includes multiple demonstrations of system robustness and quality. These include
    capture in a studio setup, capture off a consumer binocular-stereo camera, scanning
    of faces of varying gender and ethnicity and age, capture of highly-transient
    facial expression, and scanning a physical mask to provide ground-truth validation.
author:
- first_name: Thabo
  full_name: Beeler, Thabo
  last_name: Beeler
- first_name: Bernd
  full_name: Bernd Bickel
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
- first_name: Paul
  full_name: Beardsley, Paul A
  last_name: Beardsley
- first_name: Bob
  full_name: Sumner, Bob
  last_name: Sumner
- first_name: Markus
  full_name: Groß, Markus S
  last_name: Groß
citation:
  ama: Beeler T, Bickel B, Beardsley P, Sumner B, Groß M. High-quality single-shot
    capture of facial geometry. <i>ACM Transactions on Graphics</i>. 2010;29(4). doi:<a
    href="https://doi.org/10.1145/1778765.1778777">10.1145/1778765.1778777</a>
  apa: Beeler, T., Bickel, B., Beardsley, P., Sumner, B., &#38; Groß, M. (2010). High-quality
    single-shot capture of facial geometry. <i>ACM Transactions on Graphics</i>. ACM.
    <a href="https://doi.org/10.1145/1778765.1778777">https://doi.org/10.1145/1778765.1778777</a>
  chicago: Beeler, Thabo, Bernd Bickel, Paul Beardsley, Bob Sumner, and Markus Groß.
    “High-Quality Single-Shot Capture of Facial Geometry.” <i>ACM Transactions on
    Graphics</i>. ACM, 2010. <a href="https://doi.org/10.1145/1778765.1778777">https://doi.org/10.1145/1778765.1778777</a>.
  ieee: T. Beeler, B. Bickel, P. Beardsley, B. Sumner, and M. Groß, “High-quality
    single-shot capture of facial geometry,” <i>ACM Transactions on Graphics</i>,
    vol. 29, no. 4. ACM, 2010.
  ista: Beeler T, Bickel B, Beardsley P, Sumner B, Groß M. 2010. High-quality single-shot
    capture of facial geometry. ACM Transactions on Graphics. 29(4).
  mla: Beeler, Thabo, et al. “High-Quality Single-Shot Capture of Facial Geometry.”
    <i>ACM Transactions on Graphics</i>, vol. 29, no. 4, ACM, 2010, doi:<a href="https://doi.org/10.1145/1778765.1778777">10.1145/1778765.1778777</a>.
  short: T. Beeler, B. Bickel, P. Beardsley, B. Sumner, M. Groß, ACM Transactions
    on Graphics 29 (2010).
date_created: 2018-12-11T11:55:41Z
date_published: 2010-01-01T00:00:00Z
date_updated: 2021-01-12T06:55:16Z
day: '01'
doi: 10.1145/1778765.1778777
extern: 1
intvolume: '        29'
issue: '4'
main_file_link:
- open_access: '1'
  url: http://e-collection.library.ethz.ch/view/eth:5079
month: '01'
oa: 1
publication: ACM Transactions on Graphics
publication_status: published
publisher: ACM
publist_id: '4938'
quality_controlled: 0
status: public
title: High-quality single-shot capture of facial geometry
type: journal_article
volume: 29
year: '2010'
...
---
_id: '2096'
abstract:
- lang: eng
  text: Point-based graphics has gained much attention as an alternative to polygon-based
    approaches because of its simplicity and flexibility. However, current point-based
    techniques do not provide a sufficient rendering quality for translucent materials
    such as human skin. In this paper, we propose a point-based framework with subsurface
    scattering of light, which is important to create the soft and semi-translucent
    appearance of human skin. To accurately simulate subsurface scattering in multilayered
    materials, we present splat-based diffusion to apply a linear combination of several
    Gaussian basis functions to each splat in object space. Compared to existing point-based
    approaches, our method offers a significantly improved visual quality in rendering
    human faces and provides a similar visual quality to polygon-based rendering using
    the texture space diffusion technique. We demonstrate the effectiveness of our
    approach in rendering scanned faces realistically.
author:
- first_name: Hyeonjoong
  full_name: Kim, Hyeonjoong
  last_name: Kim
- first_name: Bernd
  full_name: Bernd Bickel
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
- first_name: Markus
  full_name: Groß, Markus S
  last_name: Groß
- first_name: Soomi
  full_name: Choi, Soomi
  last_name: Choi
citation:
  ama: 'Kim H, Bickel B, Groß M, Choi S. Subsurface scattering using splat-based diffusion
    in point-based rendering. <i>Science in China, Series F: Information Sciences</i>.
    2010;53(5):911-919. doi:<a href="https://doi.org/10.1007/s11432-010-0068-y">10.1007/s11432-010-0068-y</a>'
  apa: 'Kim, H., Bickel, B., Groß, M., &#38; Choi, S. (2010). Subsurface scattering
    using splat-based diffusion in point-based rendering. <i>Science in China, Series
    F: Information Sciences</i>. Springer. <a href="https://doi.org/10.1007/s11432-010-0068-y">https://doi.org/10.1007/s11432-010-0068-y</a>'
  chicago: 'Kim, Hyeonjoong, Bernd Bickel, Markus Groß, and Soomi Choi. “Subsurface
    Scattering Using Splat-Based Diffusion in Point-Based Rendering.” <i>Science in
    China, Series F: Information Sciences</i>. Springer, 2010. <a href="https://doi.org/10.1007/s11432-010-0068-y">https://doi.org/10.1007/s11432-010-0068-y</a>.'
  ieee: 'H. Kim, B. Bickel, M. Groß, and S. Choi, “Subsurface scattering using splat-based
    diffusion in point-based rendering,” <i>Science in China, Series F: Information
    Sciences</i>, vol. 53, no. 5. Springer, pp. 911–919, 2010.'
  ista: 'Kim H, Bickel B, Groß M, Choi S. 2010. Subsurface scattering using splat-based
    diffusion in point-based rendering. Science in China, Series F: Information Sciences.
    53(5), 911–919.'
  mla: 'Kim, Hyeonjoong, et al. “Subsurface Scattering Using Splat-Based Diffusion
    in Point-Based Rendering.” <i>Science in China, Series F: Information Sciences</i>,
    vol. 53, no. 5, Springer, 2010, pp. 911–19, doi:<a href="https://doi.org/10.1007/s11432-010-0068-y">10.1007/s11432-010-0068-y</a>.'
  short: 'H. Kim, B. Bickel, M. Groß, S. Choi, Science in China, Series F: Information
    Sciences 53 (2010) 911–919.'
date_created: 2018-12-11T11:55:41Z
date_published: 2010-04-14T00:00:00Z
date_updated: 2021-01-12T06:55:16Z
day: '14'
doi: 10.1007/s11432-010-0068-y
extern: 1
intvolume: '        53'
issue: '5'
month: '04'
page: 911 - 919
publication: 'Science in China, Series F: Information Sciences'
publication_status: published
publisher: Springer
publist_id: '4939'
quality_controlled: 0
status: public
title: Subsurface scattering using splat-based diffusion in point-based rendering
type: journal_article
volume: 53
year: '2010'
...
---
_id: '2097'
abstract:
- lang: eng
  text: This paper introduces a data-driven process for designing and fabricating
    materials with desired deformation behavior. Our process starts with measuring
    deformation properties of base materials. For each base material we acquire a
    set of example deformations, and we represent the material as a non-linear stress-strain
    relationship in a finite-element model. We have validated our material measurement
    process by comparing simulations of arbitrary stacks of base materials with measured
    deformations of fabricated material stacks. After material measurement, our process
    continues with designing stacked layers of base materials. We introduce an optimization
    process that finds the best combination of stacked layers that meets a user's
    criteria specified by example deformations. Our algorithm employs a number of
    strategies to prune poor solutions from the combinatorial search space. We demonstrate
    the complete process by designing and fabricating objects with complex heterogeneous
    materials using modern multi-material 3D printers.
acknowledgement: Otaduy was supported in part by the Spanish Dept. of Science and
  Innovation (project TIN-2009-07942).
author:
- first_name: Bernd
  full_name: Bernd Bickel
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
- first_name: Moritz
  full_name: Bac̈her, Moritz
  last_name: Bac̈Her
- first_name: Miguel
  full_name: Otaduy, Miguel A
  last_name: Otaduy
- first_name: Hyunho
  full_name: Lee, Hyunho R
  last_name: Lee
- first_name: Hanspeter
  full_name: Pfister, Hanspeter
  last_name: Pfister
- first_name: Markus
  full_name: Groß, Markus S
  last_name: Groß
- first_name: Wojciech
  full_name: Matusik, Wojciech
  last_name: Matusik
citation:
  ama: Bickel B, Bac̈Her M, Otaduy M, et al. Design and fabrication of materials with
    desired deformation behavior. <i>ACM Transactions on Graphics</i>. 2010;29(4).
    doi:<a href="https://doi.org/10.1145/1778765.1778800">10.1145/1778765.1778800</a>
  apa: Bickel, B., Bac̈Her, M., Otaduy, M., Lee, H., Pfister, H., Groß, M., &#38;
    Matusik, W. (2010). Design and fabrication of materials with desired deformation
    behavior. <i>ACM Transactions on Graphics</i>. ACM. <a href="https://doi.org/10.1145/1778765.1778800">https://doi.org/10.1145/1778765.1778800</a>
  chicago: Bickel, Bernd, Moritz Bac̈Her, Miguel Otaduy, Hyunho Lee, Hanspeter Pfister,
    Markus Groß, and Wojciech Matusik. “Design and Fabrication of Materials with Desired
    Deformation Behavior.” <i>ACM Transactions on Graphics</i>. ACM, 2010. <a href="https://doi.org/10.1145/1778765.1778800">https://doi.org/10.1145/1778765.1778800</a>.
  ieee: B. Bickel <i>et al.</i>, “Design and fabrication of materials with desired
    deformation behavior,” <i>ACM Transactions on Graphics</i>, vol. 29, no. 4. ACM,
    2010.
  ista: Bickel B, Bac̈Her M, Otaduy M, Lee H, Pfister H, Groß M, Matusik W. 2010.
    Design and fabrication of materials with desired deformation behavior. ACM Transactions
    on Graphics. 29(4).
  mla: Bickel, Bernd, et al. “Design and Fabrication of Materials with Desired Deformation
    Behavior.” <i>ACM Transactions on Graphics</i>, vol. 29, no. 4, ACM, 2010, doi:<a
    href="https://doi.org/10.1145/1778765.1778800">10.1145/1778765.1778800</a>.
  short: B. Bickel, M. Bac̈Her, M. Otaduy, H. Lee, H. Pfister, M. Groß, W. Matusik,
    ACM Transactions on Graphics 29 (2010).
date_created: 2018-12-11T11:55:41Z
date_published: 2010-07-01T00:00:00Z
date_updated: 2021-01-12T06:55:17Z
day: '01'
doi: 10.1145/1778765.1778800
extern: 1
intvolume: '        29'
issue: '4'
month: '07'
publication: ACM Transactions on Graphics
publication_status: published
publisher: ACM
publist_id: '4937'
quality_controlled: 0
status: public
title: Design and fabrication of materials with desired deformation behavior
type: journal_article
volume: 29
year: '2010'
...
---
_id: '2124'
abstract:
- lang: eng
  text: We develop a theory of Malliavin calculus for Banach space-valued random variables.
    Using radonifying operators instead of symmetric tensor products we extend the
    Wiener-Itô isometry to Banach spaces. In the white noise case we obtain two sided
    Lp-estimates for multiple stochastic integrals in arbitrary Banach spaces. It
    is shown that the Malliavin derivative is bounded on vector-valued Wiener-Itô
    chaoses. Our main tools are decoupling inequalities for vector-valued random variables.
    In the opposite direction we use Meyer's inequalities to give a new proof of a
    decoupling result for Gaussian chaoses in UMD Banach spaces.
acknowledgement: The author acknowledges support by the ‘VIDI subsidie’ 639.032.201
  of the Netherlands Organisation for Scientific Research (NWO) and the ARC Discovery
  Grant DP0558539.
author:
- first_name: Jan
  full_name: Jan Maas
  id: 4C5696CE-F248-11E8-B48F-1D18A9856A87
  last_name: Maas
  orcid: 0000-0002-0845-1338
citation:
  ama: Maas J. Malliavin calculus and decoupling inequalities in Banach spaces. <i>Journal
    of Mathematical Analysis and Applications</i>. 2010;363(2):383-398. doi:<a href="https://doi.org/10.1016/j.jmaa.2009.08.041">10.1016/j.jmaa.2009.08.041</a>
  apa: Maas, J. (2010). Malliavin calculus and decoupling inequalities in Banach spaces.
    <i>Journal of Mathematical Analysis and Applications</i>. Academic Press. <a href="https://doi.org/10.1016/j.jmaa.2009.08.041">https://doi.org/10.1016/j.jmaa.2009.08.041</a>
  chicago: Maas, Jan. “Malliavin Calculus and Decoupling Inequalities in Banach Spaces.”
    <i>Journal of Mathematical Analysis and Applications</i>. Academic Press, 2010.
    <a href="https://doi.org/10.1016/j.jmaa.2009.08.041">https://doi.org/10.1016/j.jmaa.2009.08.041</a>.
  ieee: J. Maas, “Malliavin calculus and decoupling inequalities in Banach spaces,”
    <i>Journal of Mathematical Analysis and Applications</i>, vol. 363, no. 2. Academic
    Press, pp. 383–398, 2010.
  ista: Maas J. 2010. Malliavin calculus and decoupling inequalities in Banach spaces.
    Journal of Mathematical Analysis and Applications. 363(2), 383–398.
  mla: Maas, Jan. “Malliavin Calculus and Decoupling Inequalities in Banach Spaces.”
    <i>Journal of Mathematical Analysis and Applications</i>, vol. 363, no. 2, Academic
    Press, 2010, pp. 383–98, doi:<a href="https://doi.org/10.1016/j.jmaa.2009.08.041">10.1016/j.jmaa.2009.08.041</a>.
  short: J. Maas, Journal of Mathematical Analysis and Applications 363 (2010) 383–398.
date_created: 2018-12-11T11:55:51Z
date_published: 2010-03-15T00:00:00Z
date_updated: 2021-01-12T06:55:27Z
day: '15'
doi: 10.1016/j.jmaa.2009.08.041
extern: 1
intvolume: '       363'
issue: '2'
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/0801.2899
month: '03'
oa: 1
page: 383 - 398
publication: Journal of Mathematical Analysis and Applications
publication_status: published
publisher: Academic Press
publist_id: '4912'
quality_controlled: 0
status: public
title: Malliavin calculus and decoupling inequalities in Banach spaces
type: journal_article
volume: 363
year: '2010'
...
---
_id: '2194'
abstract:
- lang: eng
  text: We develop an analytic model of vector correlations in rotationally inelastic
    atom-diatom collisions and test it against the much examined Ar-NO (X2Π) system.
    Based on the Fraunhofer scattering of matter waves, the model furnishes complex
    scattering amplitudes needed to evaluate the polarization moments characterizing
    the quantum stereodynamics. The analytic polarization moments are found to be
    in an excellent agreement with experimental results and with close-coupling calculations
    available at thermal energies. The model reveals that the stereodynamics is governed
    by diffraction from the repulsive core of the Ar-NO potential, which can be characterized
    by a single Legendre moment.
author:
- first_name: Mikhail
  full_name: Mikhail Lemeshko
  id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
  last_name: Lemeshko
  orcid: 0000-0002-6990-7802
- first_name: Břetislav
  full_name: Friedrich, Břetislav
  last_name: Friedrich
citation:
  ama: Lemeshko M, Friedrich B. An analytic model of the stereodynamics of rotationally
    inelastic molecular collisions. <i>Physical Chemistry Chemical Physics</i>. 2010;12(5):1038-1041.
    doi:<a href="https://doi.org/10.1039/B920899B ">10.1039/B920899B </a>
  apa: Lemeshko, M., &#38; Friedrich, B. (2010). An analytic model of the stereodynamics
    of rotationally inelastic molecular collisions. <i>Physical Chemistry Chemical
    Physics</i>. Royal Society of Chemistry. <a href="https://doi.org/10.1039/B920899B
    ">https://doi.org/10.1039/B920899B </a>
  chicago: Lemeshko, Mikhail, and Břetislav Friedrich. “An Analytic Model of the Stereodynamics
    of Rotationally Inelastic Molecular Collisions.” <i>Physical Chemistry Chemical
    Physics</i>. Royal Society of Chemistry, 2010. <a href="https://doi.org/10.1039/B920899B
    ">https://doi.org/10.1039/B920899B </a>.
  ieee: M. Lemeshko and B. Friedrich, “An analytic model of the stereodynamics of
    rotationally inelastic molecular collisions,” <i>Physical Chemistry Chemical Physics</i>,
    vol. 12, no. 5. Royal Society of Chemistry, pp. 1038–1041, 2010.
  ista: Lemeshko M, Friedrich B. 2010. An analytic model of the stereodynamics of
    rotationally inelastic molecular collisions. Physical Chemistry Chemical Physics.
    12(5), 1038–1041.
  mla: Lemeshko, Mikhail, and Břetislav Friedrich. “An Analytic Model of the Stereodynamics
    of Rotationally Inelastic Molecular Collisions.” <i>Physical Chemistry Chemical
    Physics</i>, vol. 12, no. 5, Royal Society of Chemistry, 2010, pp. 1038–41, doi:<a
    href="https://doi.org/10.1039/B920899B ">10.1039/B920899B </a>.
  short: M. Lemeshko, B. Friedrich, Physical Chemistry Chemical Physics 12 (2010)
    1038–1041.
date_created: 2018-12-11T11:56:15Z
date_published: 2010-02-07T00:00:00Z
date_updated: 2021-01-12T06:55:54Z
day: '07'
doi: '10.1039/B920899B '
extern: 1
intvolume: '        12'
issue: '5'
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/0910.0952
month: '02'
oa: 1
page: 1038 - 1041
publication: Physical Chemistry Chemical Physics
publication_status: published
publisher: Royal Society of Chemistry
publist_id: '4780'
quality_controlled: 0
status: public
title: An analytic model of the stereodynamics of rotationally inelastic molecular
  collisions
type: journal_article
volume: 12
year: '2010'
...
---
_id: '2195'
abstract:
- lang: eng
  text: 'Following upon our recent work on vector correlations in the Ar-NO collisions
    [Lemeshko and Friedrich, Phys. Chem. Chem. Phys. 12, 1038 (2010)], we compare
    model results with close-coupling calculations for a range of channels and collision
    energies for the He-NO system. The striking agreement between the model and exact
    polarization moments indicates that the stereodynamics of rotationally inelastic
    atom-molecule collisions at thermal energies is governed by diffraction of matter
    waves from a two-dimensional repulsive core of the atom-molecule potential. Furthermore,
    the model polarization moments characterizing the He-NO, He- O2, He-OH, and He-CaH
    stereodynamics are found to coalesce into a single, distinctive pattern, which
    can serve as a &quot;fingerprint&quot; to identify diffraction-driven stereodynamics
    in future work. '
acknowledgement: Financial support of the Spanish Ministry of Science and Innovation
  (Grant No. CTQ2008-02578) is gratefully acknowledged.
author:
- first_name: Mikhail
  full_name: Mikhail Lemeshko
  id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
  last_name: Lemeshko
  orcid: 0000-0002-6990-7802
- first_name: Pablo
  full_name: Jambrina, Pablo G
  last_name: Jambrina
- first_name: Marcelo
  full_name: De Miranda, Marcelo P
  last_name: De Miranda
- first_name: Břetislav
  full_name: Friedrich, Břetislav
  last_name: Friedrich
citation:
  ama: 'Lemeshko M, Jambrina P, De Miranda M, Friedrich B. Communications: When diffraction
    rules the stereodynamics of rotationally inelastic collisions. <i>Journal of Chemical
    Physics</i>. 2010;132(16). doi:<a href="https://doi.org/10.1063/1.3386530">10.1063/1.3386530</a>'
  apa: 'Lemeshko, M., Jambrina, P., De Miranda, M., &#38; Friedrich, B. (2010). Communications:
    When diffraction rules the stereodynamics of rotationally inelastic collisions.
    <i>Journal of Chemical Physics</i>. American Institute of Physics. <a href="https://doi.org/10.1063/1.3386530">https://doi.org/10.1063/1.3386530</a>'
  chicago: 'Lemeshko, Mikhail, Pablo Jambrina, Marcelo De Miranda, and Břetislav Friedrich.
    “Communications: When Diffraction Rules the Stereodynamics of Rotationally Inelastic
    Collisions.” <i>Journal of Chemical Physics</i>. American Institute of Physics,
    2010. <a href="https://doi.org/10.1063/1.3386530">https://doi.org/10.1063/1.3386530</a>.'
  ieee: 'M. Lemeshko, P. Jambrina, M. De Miranda, and B. Friedrich, “Communications:
    When diffraction rules the stereodynamics of rotationally inelastic collisions,”
    <i>Journal of Chemical Physics</i>, vol. 132, no. 16. American Institute of Physics,
    2010.'
  ista: 'Lemeshko M, Jambrina P, De Miranda M, Friedrich B. 2010. Communications:
    When diffraction rules the stereodynamics of rotationally inelastic collisions.
    Journal of Chemical Physics. 132(16).'
  mla: 'Lemeshko, Mikhail, et al. “Communications: When Diffraction Rules the Stereodynamics
    of Rotationally Inelastic Collisions.” <i>Journal of Chemical Physics</i>, vol.
    132, no. 16, American Institute of Physics, 2010, doi:<a href="https://doi.org/10.1063/1.3386530">10.1063/1.3386530</a>.'
  short: M. Lemeshko, P. Jambrina, M. De Miranda, B. Friedrich, Journal of Chemical
    Physics 132 (2010).
date_created: 2018-12-11T11:56:16Z
date_published: 2010-04-28T00:00:00Z
date_updated: 2021-01-12T06:55:54Z
day: '28'
doi: 10.1063/1.3386530
extern: 1
intvolume: '       132'
issue: '16'
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1002.1572
month: '04'
oa: 1
publication: Journal of Chemical Physics
publication_status: published
publisher: American Institute of Physics
publist_id: '4779'
quality_controlled: 0
status: public
title: 'Communications: When diffraction rules the stereodynamics of rotationally
  inelastic collisions'
type: journal_article
volume: 132
year: '2010'
...
---
_id: '2196'
abstract:
- lang: eng
  text: We evaluate the shifts imparted to vibrational and rotational levels of a
    linear molecule by a nonresonant laser field at intensities of up to 10 12 W/cm2.
    Both types of shift are found to be either positive or negative, depending on
    the initial rotational state acted upon by the field. An adiabatic field-molecule
    interaction imparts a rotational energy shift which is negative and exceeds the
    concomitant positive vibrational shift by a few orders of magnitude. The rovibrational
    states are thus pushed downward in such a field. A nonresonant pulsed laser field
    that interacts nonadiabatically with the molecule is found to impart rotational
    and vibrational shifts of the same order of magnitude. The nonadiabatic energy
    transfer occurs most readily at a pulse duration which amounts to about a tenth
    of the molecule's rotational period and vanishes when the sudden regime is attained
    for shorter pulses. We applied our treatment to the much-studied 87Rb2 molecule
    in the last bound vibrational levels of its lowest singlet and triplet electronic
    states. Our calculations indicate that 15 and 1.5 ns laser pulses of an intensity
    in excess of 5 × 109 W/cm2 are capable of dissociating the molecule due to the
    vibrational shift. Lesser shifts can be used to fine-tune the rovibrational levels
    and thereby affect collisional resonances by the nonresonant light. The energy
    shifts due to laser intensities of 109 W/cm2 may be discernible spectroscopically,
    with a 10 MHz resolution.
author:
- first_name: Mikhail
  full_name: Mikhail Lemeshko
  id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
  last_name: Lemeshko
  orcid: 0000-0002-6990-7802
- first_name: Břetislav
  full_name: Friedrich, Břetislav
  last_name: Friedrich
citation:
  ama: Lemeshko M, Friedrich B. Fine-tuning molecular energy levels by nonresonant
    laser pulses. <i>Journal of Physical Chemistry A</i>. 2010;114(36):9848-9854.
    doi:<a href="https://doi.org/10.1021/jp1032299">10.1021/jp1032299</a>
  apa: Lemeshko, M., &#38; Friedrich, B. (2010). Fine-tuning molecular energy levels
    by nonresonant laser pulses. <i>Journal of Physical Chemistry A</i>. American
    Chemical Society. <a href="https://doi.org/10.1021/jp1032299">https://doi.org/10.1021/jp1032299</a>
  chicago: Lemeshko, Mikhail, and Břetislav Friedrich. “Fine-Tuning Molecular Energy
    Levels by Nonresonant Laser Pulses.” <i>Journal of Physical Chemistry A</i>. American
    Chemical Society, 2010. <a href="https://doi.org/10.1021/jp1032299">https://doi.org/10.1021/jp1032299</a>.
  ieee: M. Lemeshko and B. Friedrich, “Fine-tuning molecular energy levels by nonresonant
    laser pulses,” <i>Journal of Physical Chemistry A</i>, vol. 114, no. 36. American
    Chemical Society, pp. 9848–9854, 2010.
  ista: Lemeshko M, Friedrich B. 2010. Fine-tuning molecular energy levels by nonresonant
    laser pulses. Journal of Physical Chemistry A. 114(36), 9848–9854.
  mla: Lemeshko, Mikhail, and Břetislav Friedrich. “Fine-Tuning Molecular Energy Levels
    by Nonresonant Laser Pulses.” <i>Journal of Physical Chemistry A</i>, vol. 114,
    no. 36, American Chemical Society, 2010, pp. 9848–54, doi:<a href="https://doi.org/10.1021/jp1032299">10.1021/jp1032299</a>.
  short: M. Lemeshko, B. Friedrich, Journal of Physical Chemistry A 114 (2010) 9848–9854.
date_created: 2018-12-11T11:56:16Z
date_published: 2010-09-16T00:00:00Z
date_updated: 2021-01-12T06:55:55Z
day: '16'
doi: 10.1021/jp1032299
extern: 1
intvolume: '       114'
issue: '36'
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1004.1742
month: '09'
oa: 1
page: 9848 - 9854
publication: Journal of Physical Chemistry A
publication_status: published
publisher: American Chemical Society
publist_id: '4777'
quality_controlled: 0
status: public
title: Fine-tuning molecular energy levels by nonresonant laser pulses
type: journal_article
volume: 114
year: '2010'
...
---
_id: '2197'
abstract:
- lang: eng
  text: We present an analytic model of the refractive index for matter waves propagating
    through atomic or molecular gases. The model, which combines the Wentzel-Kramers-Brillouin
    (WKB) treatment of the long-range attraction with the Fraunhofer model treatment
    of the short-range repulsion, furnishes a refractive index in compelling agreement
    with recent experiments of Jacquey [Phys. Rev. Lett.PRLTAO0031-900710.1103/PhysRevLett.98.240405
    98, 240405 (2007)] on Li atom matter waves passing through dilute noble gases.
    We show that the diffractive contribution, which arises from scattering by a two-dimensional
    &quot;hard core&quot; of the potential, is essential for obtaining a correct imaginary
    part of the refractive index.
author:
- first_name: Mikhail
  full_name: Mikhail Lemeshko
  id: 37CB05FA-F248-11E8-B48F-1D18A9856A87
  last_name: Lemeshko
  orcid: 0000-0002-6990-7802
- first_name: Břetislav
  full_name: Friedrich, Břetislav
  last_name: Friedrich
citation:
  ama: 'Lemeshko M, Friedrich B. Multiple scattering of matter waves: An analytic
    model of the refractive index for atomic and molecular gases. <i>Physical Review
    A - Atomic, Molecular, and Optical Physics</i>. 2010;82(2). doi:<a href="https://doi.org/10.1103/PhysRevA.82.022711">10.1103/PhysRevA.82.022711</a>'
  apa: 'Lemeshko, M., &#38; Friedrich, B. (2010). Multiple scattering of matter waves:
    An analytic model of the refractive index for atomic and molecular gases. <i>Physical
    Review A - Atomic, Molecular, and Optical Physics</i>. American Physical Society.
    <a href="https://doi.org/10.1103/PhysRevA.82.022711">https://doi.org/10.1103/PhysRevA.82.022711</a>'
  chicago: 'Lemeshko, Mikhail, and Břetislav Friedrich. “Multiple Scattering of Matter
    Waves: An Analytic Model of the Refractive Index for Atomic and Molecular Gases.”
    <i>Physical Review A - Atomic, Molecular, and Optical Physics</i>. American Physical
    Society, 2010. <a href="https://doi.org/10.1103/PhysRevA.82.022711">https://doi.org/10.1103/PhysRevA.82.022711</a>.'
  ieee: 'M. Lemeshko and B. Friedrich, “Multiple scattering of matter waves: An analytic
    model of the refractive index for atomic and molecular gases,” <i>Physical Review
    A - Atomic, Molecular, and Optical Physics</i>, vol. 82, no. 2. American Physical
    Society, 2010.'
  ista: 'Lemeshko M, Friedrich B. 2010. Multiple scattering of matter waves: An analytic
    model of the refractive index for atomic and molecular gases. Physical Review
    A - Atomic, Molecular, and Optical Physics. 82(2).'
  mla: 'Lemeshko, Mikhail, and Břetislav Friedrich. “Multiple Scattering of Matter
    Waves: An Analytic Model of the Refractive Index for Atomic and Molecular Gases.”
    <i>Physical Review A - Atomic, Molecular, and Optical Physics</i>, vol. 82, no.
    2, American Physical Society, 2010, doi:<a href="https://doi.org/10.1103/PhysRevA.82.022711">10.1103/PhysRevA.82.022711</a>.'
  short: M. Lemeshko, B. Friedrich, Physical Review A - Atomic, Molecular, and Optical
    Physics 82 (2010).
date_created: 2018-12-11T11:56:16Z
date_published: 2010-08-18T00:00:00Z
date_updated: 2021-01-12T06:55:55Z
day: '18'
doi: 10.1103/PhysRevA.82.022711
extern: 1
intvolume: '        82'
issue: '2'
main_file_link:
- open_access: '1'
  url: http://arxiv.org/abs/1003.0854
month: '08'
oa: 1
publication: Physical Review A - Atomic, Molecular, and Optical Physics
publication_status: published
publisher: American Physical Society
publist_id: '4778'
quality_controlled: 0
status: public
title: 'Multiple scattering of matter waves: An analytic model of the refractive index
  for atomic and molecular gases'
type: journal_article
volume: 82
year: '2010'
...
---
_id: '13409'
abstract:
- lang: eng
  text: The immobilization of molecular switches onto inorganic supports has recently
    become a hot topic as it can give rise to novel hybrid materials in which the
    properties of the two components are mutually enhanced. Even more attractive is
    the concept of “transferring” the switchable characteristics of single layers
    of organic molecules onto the underlying inorganic components, rendering them
    responsive to external stimuli as well. Of the various molecular switches studied,
    azobenzene (AB) has arguably attracted most attention due to its simple molecular
    structure, and because its “trigger” (light) is a noninvasive one, it can be delivered
    instantaneously, and into a precise location. In order to fully realize its potential,
    however, it is necessary to immobilize AB onto solid supports. It is the goal
    of this manuscript to comprehensively yet concisely review such hybrid systems
    which comprise AB forming well-defined self-assembled monolayers (SAMs) on planar
    and curved (colloidal and nanoporous) inorganic surfaces. I discuss methods to
    immobilize AB derivatives onto surfaces, strategies to ensure efficient AB isomerization,
    ways to monitor the switching process, properties of these switchable hybrid materials,
    and, last but not least, their emerging applications.
article_processing_charge: No
article_type: original
author:
- first_name: Rafal
  full_name: Klajn, Rafal
  id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
  last_name: Klajn
citation:
  ama: Klajn R. Immobilized azobenzenes for the construction of photoresponsive materials.
    <i>Pure and Applied Chemistry</i>. 2010;82(12):2247-2279. doi:<a href="https://doi.org/10.1351/pac-con-10-09-04">10.1351/pac-con-10-09-04</a>
  apa: Klajn, R. (2010). Immobilized azobenzenes for the construction of photoresponsive
    materials. <i>Pure and Applied Chemistry</i>. De Gruyter. <a href="https://doi.org/10.1351/pac-con-10-09-04">https://doi.org/10.1351/pac-con-10-09-04</a>
  chicago: Klajn, Rafal. “Immobilized Azobenzenes for the Construction of Photoresponsive
    Materials.” <i>Pure and Applied Chemistry</i>. De Gruyter, 2010. <a href="https://doi.org/10.1351/pac-con-10-09-04">https://doi.org/10.1351/pac-con-10-09-04</a>.
  ieee: R. Klajn, “Immobilized azobenzenes for the construction of photoresponsive
    materials,” <i>Pure and Applied Chemistry</i>, vol. 82, no. 12. De Gruyter, pp.
    2247–2279, 2010.
  ista: Klajn R. 2010. Immobilized azobenzenes for the construction of photoresponsive
    materials. Pure and Applied Chemistry. 82(12), 2247–2279.
  mla: Klajn, Rafal. “Immobilized Azobenzenes for the Construction of Photoresponsive
    Materials.” <i>Pure and Applied Chemistry</i>, vol. 82, no. 12, De Gruyter, 2010,
    pp. 2247–79, doi:<a href="https://doi.org/10.1351/pac-con-10-09-04">10.1351/pac-con-10-09-04</a>.
  short: R. Klajn, Pure and Applied Chemistry 82 (2010) 2247–2279.
date_created: 2023-08-01T09:48:11Z
date_published: 2010-10-15T00:00:00Z
date_updated: 2024-10-14T12:21:48Z
day: '15'
doi: 10.1351/pac-con-10-09-04
extern: '1'
intvolume: '        82'
issue: '12'
keyword:
- General Chemical Engineering
- General Chemistry
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1351/pac-con-10-09-04
month: '10'
oa: 1
oa_version: Published Version
page: 2247-2279
publication: Pure and Applied Chemistry
publication_identifier:
  eissn:
  - 1365-3075
  issn:
  - 0033-4545
publication_status: published
publisher: De Gruyter
quality_controlled: '1'
scopus_import: '1'
status: public
title: Immobilized azobenzenes for the construction of photoresponsive materials
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 82
year: '2010'
...
