---
_id: '18381'
abstract:
- lang: eng
  text: Partial matching is probably one of the most challenging problems in nonrigid
    shape analysis. The problem consists of matching similar parts of shapes that
    are dissimilar on the whole and can assume different forms by undergoing nonrigid
    deformations. Conceptually, two shapes can be considered partially matching if
    they have significant similar parts, with the simplest definition of significance
    being the size of the parts. Thus, partial matching can be defined as a multicriterion
    optimization problem trying to simultaneously maximize the similarity and the
    size of these parts. In this paper, we propose a different definition of significance,
    taking into account the regularity of parts besides their size. The regularity
    term proposed here is similar to the spirit of the Mumford-Shah functional. Numerical
    experiments show that the regularized partial matching produces semantically better
    results compared to the non-regularized one.
article_processing_charge: No
author:
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: Michael M.
  full_name: Bronstein, Michael M.
  last_name: Bronstein
citation:
  ama: 'Bronstein AM, Bronstein MM. Not only size matters: Regularized partial matching
    of nonrigid shapes. In: <i>2008 IEEE Computer Society Conference on Computer Vision
    and Pattern Recognition Workshops</i>. IEEE; 2008. doi:<a href="https://doi.org/10.1109/cvprw.2008.4563077">10.1109/cvprw.2008.4563077</a>'
  apa: 'Bronstein, A. M., &#38; Bronstein, M. M. (2008). Not only size matters: Regularized
    partial matching of nonrigid shapes. In <i>2008 IEEE Computer Society Conference
    on Computer Vision and Pattern Recognition Workshops</i>. Anchorage, AK, United
    States: IEEE. <a href="https://doi.org/10.1109/cvprw.2008.4563077">https://doi.org/10.1109/cvprw.2008.4563077</a>'
  chicago: 'Bronstein, Alex M., and Michael M. Bronstein. “Not Only Size Matters:
    Regularized Partial Matching of Nonrigid Shapes.” In <i>2008 IEEE Computer Society
    Conference on Computer Vision and Pattern Recognition Workshops</i>. IEEE, 2008.
    <a href="https://doi.org/10.1109/cvprw.2008.4563077">https://doi.org/10.1109/cvprw.2008.4563077</a>.'
  ieee: 'A. M. Bronstein and M. M. Bronstein, “Not only size matters: Regularized
    partial matching of nonrigid shapes,” in <i>2008 IEEE Computer Society Conference
    on Computer Vision and Pattern Recognition Workshops</i>, Anchorage, AK, United
    States, 2008.'
  ista: 'Bronstein AM, Bronstein MM. 2008. Not only size matters: Regularized partial
    matching of nonrigid shapes. 2008 IEEE Computer Society Conference on Computer
    Vision and Pattern Recognition Workshops. CVPR: Conference on Computer Vision
    and Pattern Recognition.'
  mla: 'Bronstein, Alex M., and Michael M. Bronstein. “Not Only Size Matters: Regularized
    Partial Matching of Nonrigid Shapes.” <i>2008 IEEE Computer Society Conference
    on Computer Vision and Pattern Recognition Workshops</i>, IEEE, 2008, doi:<a href="https://doi.org/10.1109/cvprw.2008.4563077">10.1109/cvprw.2008.4563077</a>.'
  short: A.M. Bronstein, M.M. Bronstein, in:, 2008 IEEE Computer Society Conference
    on Computer Vision and Pattern Recognition Workshops, IEEE, 2008.
conference:
  end_date: 2008-06-28
  location: Anchorage, AK, United States
  name: 'CVPR: Conference on Computer Vision and Pattern Recognition'
  start_date: 2008-06-23
date_created: 2024-10-15T11:20:54Z
date_published: 2008-07-01T00:00:00Z
date_updated: 2024-11-18T10:18:28Z
day: '01'
doi: 10.1109/cvprw.2008.4563077
extern: '1'
language:
- iso: eng
month: '07'
oa_version: None
publication: 2008 IEEE Computer Society Conference on Computer Vision and Pattern
  Recognition Workshops
publication_identifier:
  isbn:
  - '9781424423392'
  issn:
  - 2160-7508
publication_status: published
publisher: IEEE
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Not only size matters: Regularized partial matching of nonrigid shapes'
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2008'
...
---
_id: '18431'
abstract:
- lang: eng
  text: We present an efficient O(n) numerical algorithm for first-order approximation
    of geodesic distances on geometry images, where n is the number of points on the
    surface. The structure of our algorithm allows efficient implementation on parallel
    architectures. Two implementations on a SIMD processor and on a GPU are discussed.
    Numerical results demonstrate up to four orders of magnitude improvement in execution
    time compared to the state-of-the-art algorithms.
article_number: '104'
article_processing_charge: No
author:
- first_name: Ofir
  full_name: Weber, Ofir
  last_name: Weber
- first_name: Yohai S.
  full_name: Devir, Yohai S.
  last_name: Devir
- first_name: Alexander
  full_name: Bronstein, Alexander
  id: 58f3726e-7cba-11ef-ad8b-e6e8cb3904e6
  last_name: Bronstein
  orcid: 0000-0001-9699-8730
- first_name: Michael M.
  full_name: Bronstein, Michael M.
  last_name: Bronstein
- first_name: Ron
  full_name: Kimmel, Ron
  last_name: Kimmel
citation:
  ama: Weber O, Devir YS, Bronstein AM, Bronstein MM, Kimmel R. Parallel algorithms
    for approximation of distance maps on parametric surfaces. <i>ACM Transactions
    on Graphics</i>. 2008;27(4). doi:<a href="https://doi.org/10.1145/1409625.1409626">10.1145/1409625.1409626</a>
  apa: Weber, O., Devir, Y. S., Bronstein, A. M., Bronstein, M. M., &#38; Kimmel,
    R. (2008). Parallel algorithms for approximation of distance maps on parametric
    surfaces. <i>ACM Transactions on Graphics</i>. Association for Computing Machinery.
    <a href="https://doi.org/10.1145/1409625.1409626">https://doi.org/10.1145/1409625.1409626</a>
  chicago: Weber, Ofir, Yohai S. Devir, Alex M. Bronstein, Michael M. Bronstein, and
    Ron Kimmel. “Parallel Algorithms for Approximation of Distance Maps on Parametric
    Surfaces.” <i>ACM Transactions on Graphics</i>. Association for Computing Machinery,
    2008. <a href="https://doi.org/10.1145/1409625.1409626">https://doi.org/10.1145/1409625.1409626</a>.
  ieee: O. Weber, Y. S. Devir, A. M. Bronstein, M. M. Bronstein, and R. Kimmel, “Parallel
    algorithms for approximation of distance maps on parametric surfaces,” <i>ACM
    Transactions on Graphics</i>, vol. 27, no. 4. Association for Computing Machinery,
    2008.
  ista: Weber O, Devir YS, Bronstein AM, Bronstein MM, Kimmel R. 2008. Parallel algorithms
    for approximation of distance maps on parametric surfaces. ACM Transactions on
    Graphics. 27(4), 104.
  mla: Weber, Ofir, et al. “Parallel Algorithms for Approximation of Distance Maps
    on Parametric Surfaces.” <i>ACM Transactions on Graphics</i>, vol. 27, no. 4,
    104, Association for Computing Machinery, 2008, doi:<a href="https://doi.org/10.1145/1409625.1409626">10.1145/1409625.1409626</a>.
  short: O. Weber, Y.S. Devir, A.M. Bronstein, M.M. Bronstein, R. Kimmel, ACM Transactions
    on Graphics 27 (2008).
date_created: 2024-10-15T11:20:55Z
date_published: 2008-10-01T00:00:00Z
date_updated: 2024-12-18T14:46:45Z
day: '01'
doi: 10.1145/1409625.1409626
extern: '1'
intvolume: '        27'
issue: '4'
language:
- iso: eng
month: '10'
oa_version: None
publication: ACM Transactions on Graphics
publication_identifier:
  eissn:
  - 1557-7368
  issn:
  - 0730-0301
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
scopus_import: '1'
status: public
title: Parallel algorithms for approximation of distance maps on parametric surfaces
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 27
year: '2008'
...
---
_id: '12656'
abstract:
- lang: eng
  text: We use meteorological data from two automatic weather stations (AWS) on Juncal
    Norte Glacier, central Chile, to investigate the glacier–climate interaction and
    to test ablation models of different complexity. The semi-arid Central Andes are
    characterized by dry summers, with precipitation close to zero, low relative humidity
    and intense solar radiation. We show that katabatic forcing is dominant both on
    the glacier tongue and in the fore field, and that low humidity and absence of
    clouds cause strong radiative cooling of the glacier surface. Surface albedo is
    basically constant for snow and ice, because of the scarcity of solid precipitation.
    The energy balance of the glacier is simulated for a 2-month period in austral
    summer using two models of different complexity, which differ in the inclusion
    of the heat conduction flux into the snowpack and in the parameterization of the
    incoming longwave radiation. Net shortwave radiation is the dominant component
    of the energy balance. The sensible heat flux is always positive, while both the
    net longwave radiation and latent heat flux are negative. Neglecting the subsurface
    heat flux and corresponding variations in surface temperature leads to an overestimation
    of ablation of 2% over a total of 3695 mm water equivalent (w.e.) at the end of
    the season. Correct modelling of incoming longwave radiation is crucial, and we
    suggest that parameterizations based on vapour pressure and air temperature should
    be used rather than on computed cloud amount. We also used an enhanced temperature-index
    model incorporating the shortwave radiation flux, which has two empirical parameters.
    We apply it both with values of parameters obtained for Alpine glaciers and recalibrated
    on Juncal Norte. The model recalibrated against the correct energy balance simulations
    performs very well. The model parameters respond to the meteorological conditions
    typical of this climatic setting.
article_processing_charge: No
article_type: original
author:
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
  orcid: 0000-0002-5554-8087
- first_name: Jakob
  full_name: Helbing, Jakob
  last_name: Helbing
- first_name: Andrés
  full_name: Rivera, Andrés
  last_name: Rivera
- first_name: Vincent
  full_name: Favier, Vincent
  last_name: Favier
- first_name: Javier
  full_name: Corripio, Javier
  last_name: Corripio
- first_name: José
  full_name: Araos, José
  last_name: Araos
- first_name: Jean-Emmanuel
  full_name: Sicart, Jean-Emmanuel
  last_name: Sicart
- first_name: Marco
  full_name: Carenzo, Marco
  last_name: Carenzo
citation:
  ama: Pellicciotti F, Helbing J, Rivera A, et al. A study of the energy balance and
    melt regime on Juncal Norte Glacier, semi-arid Andes of central Chile, using melt
    models of different complexity. <i>Hydrological Processes</i>. 2008;22(19):3980-3997.
    doi:<a href="https://doi.org/10.1002/hyp.7085">10.1002/hyp.7085</a>
  apa: Pellicciotti, F., Helbing, J., Rivera, A., Favier, V., Corripio, J., Araos,
    J., … Carenzo, M. (2008). A study of the energy balance and melt regime on Juncal
    Norte Glacier, semi-arid Andes of central Chile, using melt models of different
    complexity. <i>Hydrological Processes</i>. Wiley. <a href="https://doi.org/10.1002/hyp.7085">https://doi.org/10.1002/hyp.7085</a>
  chicago: Pellicciotti, Francesca, Jakob Helbing, Andrés Rivera, Vincent Favier,
    Javier Corripio, José Araos, Jean-Emmanuel Sicart, and Marco Carenzo. “A Study
    of the Energy Balance and Melt Regime on Juncal Norte Glacier, Semi-Arid Andes
    of Central Chile, Using Melt Models of Different Complexity.” <i>Hydrological
    Processes</i>. Wiley, 2008. <a href="https://doi.org/10.1002/hyp.7085">https://doi.org/10.1002/hyp.7085</a>.
  ieee: F. Pellicciotti <i>et al.</i>, “A study of the energy balance and melt regime
    on Juncal Norte Glacier, semi-arid Andes of central Chile, using melt models of
    different complexity,” <i>Hydrological Processes</i>, vol. 22, no. 19. Wiley,
    pp. 3980–3997, 2008.
  ista: Pellicciotti F, Helbing J, Rivera A, Favier V, Corripio J, Araos J, Sicart
    J-E, Carenzo M. 2008. A study of the energy balance and melt regime on Juncal
    Norte Glacier, semi-arid Andes of central Chile, using melt models of different
    complexity. Hydrological Processes. 22(19), 3980–3997.
  mla: Pellicciotti, Francesca, et al. “A Study of the Energy Balance and Melt Regime
    on Juncal Norte Glacier, Semi-Arid Andes of Central Chile, Using Melt Models of
    Different Complexity.” <i>Hydrological Processes</i>, vol. 22, no. 19, Wiley,
    2008, pp. 3980–97, doi:<a href="https://doi.org/10.1002/hyp.7085">10.1002/hyp.7085</a>.
  short: F. Pellicciotti, J. Helbing, A. Rivera, V. Favier, J. Corripio, J. Araos,
    J.-E. Sicart, M. Carenzo, Hydrological Processes 22 (2008) 3980–3997.
date_created: 2023-02-20T08:18:45Z
date_published: 2008-09-15T00:00:00Z
date_updated: 2024-10-14T12:00:17Z
day: '15'
doi: 10.1002/hyp.7085
extern: '1'
intvolume: '        22'
issue: '19'
keyword:
- Water Science and Technology
language:
- iso: eng
month: '09'
oa_version: None
page: 3980-3997
publication: Hydrological Processes
publication_identifier:
  eissn:
  - 1099-1085
  issn:
  - 0885-6087
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: A study of the energy balance and melt regime on Juncal Norte Glacier, semi-arid
  Andes of central Chile, using melt models of different complexity
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 22
year: '2008'
...
---
_id: '1296'
abstract:
- lang: eng
  text: The crystalline-like structure of the optic lobes of the fruit fly Drosophila
    melanogaster has made them a model system for the study of neuronal cell-fate
    determination, axonal path finding, and target selection. For functional studies,
    however, the small size of the constituting visual interneurons has so far presented
    a formidable barrier. We have overcome this problem by establishing in vivo whole-cell
    recordings [1] from genetically targeted visual interneurons of Drosophila. Here,
    we describe the response properties of six motion-sensitive large-field neurons
    in the lobula plate that form a network consisting of individually identifiable,
    directionally selective cells most sensitive to vertical image motion (VS cells
    [2, 3]). Individual VS cell responses to visual motion stimuli exhibit all the
    characteristics that are indicative of presynaptic input from elementary motion
    detectors of the correlation type [4, 5]. Different VS cells possess distinct
    receptive fields that are arranged sequentially along the eye's azimuth, corresponding
    to their characteristic cellular morphology and position within the retinotopically
    organized lobula plate. In addition, lateral connections between individual VS
    cells cause strongly overlapping receptive fields that are wider than expected
    from their dendritic input. Our results suggest that motion vision in different
    dipteran fly species is accomplished in similar circuitries and according to common
    algorithmic rules. The underlying neural mechanisms of population coding within
    the VS cell network and of elementary motion detection, respectively, can now
    be analyzed by the combination of electrophysiology and genetic intervention in
    Drosophila.
acknowledgement: This work was supported by the Max-Planck-Society and by a Human
  Frontier Science Program (HFSP) grant to K. Ito, A.B., and B. Nelson.
author:
- first_name: Maximilian A
  full_name: Maximilian Jösch
  id: 2BD278E6-F248-11E8-B48F-1D18A9856A87
  last_name: Jösch
  orcid: 0000-0002-3937-1330
- first_name: Johannes
  full_name: Plett, Johannes
  last_name: Plett
- first_name: Alexander
  full_name: Borst, Alexander
  last_name: Borst
- first_name: Dierk
  full_name: Reiff, Dierk F
  last_name: Reiff
citation:
  ama: Jösch MA, Plett J, Borst A, Reiff D. Response properties of motion sensitive
    visual interneurons in the Lobula plate of Drosophila melanogaster. <i>Current
    Biology</i>. 2008;18(5):368-374. doi:<a href="https://doi.org/10.1016/j.cub.2008.02.022">10.1016/j.cub.2008.02.022</a>
  apa: Jösch, M. A., Plett, J., Borst, A., &#38; Reiff, D. (2008). Response properties
    of motion sensitive visual interneurons in the Lobula plate of Drosophila melanogaster.
    <i>Current Biology</i>. Cell Press. <a href="https://doi.org/10.1016/j.cub.2008.02.022">https://doi.org/10.1016/j.cub.2008.02.022</a>
  chicago: Jösch, Maximilian A, Johannes Plett, Alexander Borst, and Dierk Reiff.
    “Response Properties of Motion Sensitive Visual Interneurons in the Lobula Plate
    of Drosophila Melanogaster.” <i>Current Biology</i>. Cell Press, 2008. <a href="https://doi.org/10.1016/j.cub.2008.02.022">https://doi.org/10.1016/j.cub.2008.02.022</a>.
  ieee: M. A. Jösch, J. Plett, A. Borst, and D. Reiff, “Response properties of motion
    sensitive visual interneurons in the Lobula plate of Drosophila melanogaster,”
    <i>Current Biology</i>, vol. 18, no. 5. Cell Press, pp. 368–374, 2008.
  ista: Jösch MA, Plett J, Borst A, Reiff D. 2008. Response properties of motion sensitive
    visual interneurons in the Lobula plate of Drosophila melanogaster. Current Biology.
    18(5), 368–374.
  mla: Jösch, Maximilian A., et al. “Response Properties of Motion Sensitive Visual
    Interneurons in the Lobula Plate of Drosophila Melanogaster.” <i>Current Biology</i>,
    vol. 18, no. 5, Cell Press, 2008, pp. 368–74, doi:<a href="https://doi.org/10.1016/j.cub.2008.02.022">10.1016/j.cub.2008.02.022</a>.
  short: M.A. Jösch, J. Plett, A. Borst, D. Reiff, Current Biology 18 (2008) 368–374.
date_created: 2018-12-11T11:51:13Z
date_published: 2008-03-11T00:00:00Z
date_updated: 2021-01-12T06:49:42Z
day: '11'
doi: 10.1016/j.cub.2008.02.022
extern: 1
intvolume: '        18'
issue: '5'
month: '03'
page: 368 - 374
publication: Current Biology
publication_status: published
publisher: Cell Press
publist_id: '5973'
quality_controlled: 0
status: public
title: Response properties of motion sensitive visual interneurons in the Lobula plate
  of Drosophila melanogaster
type: journal_article
volume: 18
year: '2008'
...
---
_id: '1982'
abstract:
- lang: eng
  text: In the bacterium Escherichia coli, the Min proteins oscillate between the
    cell poles to select the cell center as division site. This dynamic pattern has
    been proposed to arise by self-organization of these proteins, and several models
    have suggested a reaction-diffusion type mechanism. Here, we found that the Min
    proteins spontaneously formed planar surface waves on a flat membrane in vitro.
    The formation and maintenance of these patterns, which extended for hundreds of
    micrometers, required adenosine 5′-triphosphate (ATP), and they persisted for
    hours. We present a reaction-diffusion model of the MinD and MinE dynamics that
    accounts for our experimental observations and also captures the in vivo oscillations.
acknowledgement: 'This work was supported by the Max-Planck-Society (M.L., P.S., E.F.). '
author:
- first_name: Martin
  full_name: Martin Loose
  id: 462D4284-F248-11E8-B48F-1D18A9856A87
  last_name: Loose
  orcid: 0000-0001-7309-9724
- first_name: Elisabeth
  full_name: Fischer-Friedrich, Elisabeth
  last_name: Fischer Friedrich
- first_name: Jonas
  full_name: 'Ries, Jonas '
  last_name: Ries
- first_name: Karsten
  full_name: Kruse, Karsten
  last_name: Kruse
- first_name: Petra
  full_name: 'Schwille, Petra '
  last_name: Schwille
citation:
  ama: Loose M, Fischer Friedrich E, Ries J, Kruse K, Schwille P. Spatial regulators
    for bacterial cell division self-organize into surface waves in vitro. <i>Science</i>.
    2008;320(5877):789-792. doi:<a href="https://doi.org/10.1126/science.1154413">10.1126/science.1154413</a>
  apa: Loose, M., Fischer Friedrich, E., Ries, J., Kruse, K., &#38; Schwille, P. (2008).
    Spatial regulators for bacterial cell division self-organize into surface waves
    in vitro. <i>Science</i>. American Association for the Advancement of Science.
    <a href="https://doi.org/10.1126/science.1154413">https://doi.org/10.1126/science.1154413</a>
  chicago: Loose, Martin, Elisabeth Fischer Friedrich, Jonas Ries, Karsten Kruse,
    and Petra Schwille. “Spatial Regulators for Bacterial Cell Division Self-Organize
    into Surface Waves in Vitro.” <i>Science</i>. American Association for the Advancement
    of Science, 2008. <a href="https://doi.org/10.1126/science.1154413">https://doi.org/10.1126/science.1154413</a>.
  ieee: M. Loose, E. Fischer Friedrich, J. Ries, K. Kruse, and P. Schwille, “Spatial
    regulators for bacterial cell division self-organize into surface waves in vitro,”
    <i>Science</i>, vol. 320, no. 5877. American Association for the Advancement of
    Science, pp. 789–792, 2008.
  ista: Loose M, Fischer Friedrich E, Ries J, Kruse K, Schwille P. 2008. Spatial regulators
    for bacterial cell division self-organize into surface waves in vitro. Science.
    320(5877), 789–792.
  mla: Loose, Martin, et al. “Spatial Regulators for Bacterial Cell Division Self-Organize
    into Surface Waves in Vitro.” <i>Science</i>, vol. 320, no. 5877, American Association
    for the Advancement of Science, 2008, pp. 789–92, doi:<a href="https://doi.org/10.1126/science.1154413">10.1126/science.1154413</a>.
  short: M. Loose, E. Fischer Friedrich, J. Ries, K. Kruse, P. Schwille, Science 320
    (2008) 789–792.
date_created: 2018-12-11T11:55:02Z
date_published: 2008-05-09T00:00:00Z
date_updated: 2021-01-12T06:54:30Z
day: '09'
doi: 10.1126/science.1154413
extern: 1
intvolume: '       320'
issue: '5877'
month: '05'
page: 789 - 792
publication: Science
publication_status: published
publisher: American Association for the Advancement of Science
publist_id: '5101'
quality_controlled: 0
status: public
title: Spatial regulators for bacterial cell division self-organize into surface waves
  in vitro
type: journal_article
volume: 320
year: '2008'
...
---
_id: '2065'
abstract:
- lang: eng
  text: 'Population genetics models show that, under certain conditions, the X chromosome
    is expected to be under more efficient selection than the autosomes. This could
    lead to ''faster-X evolution'', if a large proportion of mutations are fixed by
    positive selection, as suggested by recent studies in Drosophila. We used a multispecies
    approach to test this: Muller''s element D, an autosomal arm, is fused to the
    ancestral X chromosome in Drosophila pseudoobscura and its sister species, Drosophila
    affinis. We tested whether the same set of genes had higher rates of non-synonymous
    evolution when they were X-linked (in the D. pseudoobscura/D. affinis comparison)
    than when they were autosomal (in Drosophila melanogaster/Drosophila yakuba).
    Although not significant, our results suggest this may be the case, but only for
    genes under particularly strong positive selection/weak purifying selection. They
    also suggest that genes that have become X-linked have higher levels of codon
    bias and slower synonymous site evolution, consistent with more effective selection
    on codon usage at X-linked sites.'
acknowledgement: B.V. was supported by the Portuguese Foundation for Science and Technology,
  P.R.H. is supported by the Natural Environmental Research Council (UK) and B.C.
  was supported by the Royal Society (UK)
author:
- first_name: Beatriz
  full_name: Beatriz Vicoso
  id: 49E1C5C6-F248-11E8-B48F-1D18A9856A87
  last_name: Vicoso
  orcid: 0000-0002-4579-8306
- first_name: Penelope
  full_name: Haddrill, Penelope R
  last_name: Haddrill
- first_name: Brian
  full_name: Charlesworth, Brian
  last_name: Charlesworth
citation:
  ama: Vicoso B, Haddrill P, Charlesworth B. A multispecies approach for comparing
    sequence evolution of X-linked and autosomal sites in Drosophila. <i>Genetical
    Research</i>. 2008;90(5):421-431. doi:<a href="https://doi.org/10.1017/S0016672308009804">10.1017/S0016672308009804</a>
  apa: Vicoso, B., Haddrill, P., &#38; Charlesworth, B. (2008). A multispecies approach
    for comparing sequence evolution of X-linked and autosomal sites in Drosophila.
    <i>Genetical Research</i>. Cambridge University Press. <a href="https://doi.org/10.1017/S0016672308009804">https://doi.org/10.1017/S0016672308009804</a>
  chicago: Vicoso, Beatriz, Penelope Haddrill, and Brian Charlesworth. “A Multispecies
    Approach for Comparing Sequence Evolution of X-Linked and Autosomal Sites in Drosophila.”
    <i>Genetical Research</i>. Cambridge University Press, 2008. <a href="https://doi.org/10.1017/S0016672308009804">https://doi.org/10.1017/S0016672308009804</a>.
  ieee: B. Vicoso, P. Haddrill, and B. Charlesworth, “A multispecies approach for
    comparing sequence evolution of X-linked and autosomal sites in Drosophila,” <i>Genetical
    Research</i>, vol. 90, no. 5. Cambridge University Press, pp. 421–431, 2008.
  ista: Vicoso B, Haddrill P, Charlesworth B. 2008. A multispecies approach for comparing
    sequence evolution of X-linked and autosomal sites in Drosophila. Genetical Research.
    90(5), 421–431.
  mla: Vicoso, Beatriz, et al. “A Multispecies Approach for Comparing Sequence Evolution
    of X-Linked and Autosomal Sites in Drosophila.” <i>Genetical Research</i>, vol.
    90, no. 5, Cambridge University Press, 2008, pp. 421–31, doi:<a href="https://doi.org/10.1017/S0016672308009804">10.1017/S0016672308009804</a>.
  short: B. Vicoso, P. Haddrill, B. Charlesworth, Genetical Research 90 (2008) 421–431.
date_created: 2018-12-11T11:55:30Z
date_published: 2008-10-01T00:00:00Z
date_updated: 2021-01-12T06:55:05Z
day: '01'
doi: 10.1017/S0016672308009804
extern: 1
intvolume: '        90'
issue: '5'
month: '10'
page: 421 - 431
publication: Genetical Research
publication_status: published
publisher: Cambridge University Press
publist_id: '4972'
quality_controlled: 0
status: public
title: A multispecies approach for comparing sequence evolution of X-linked and autosomal
  sites in Drosophila
type: journal_article
volume: 90
year: '2008'
...
---
_id: '2078'
abstract:
- lang: eng
  text: 'This paper presents a novel method for real-time animation of highly-detailed
    facial expressions based on a multi-scale decomposition of facial geometry into
    large-scale motion and fine-scale details, such as expression wrinkles. Our hybrid
    animation is tailored to the specific characteristics of large- and fine-scale
    facial deformations: Large-scale deformations are computed with a fast linear
    shell model, which is intuitively and accurately controlled through a sparse set
    of motion-capture markers or user-defined handle points. Fine-scale facial details
    are incorporated using a novel pose-space deformation technique, which learns
    the correspondence of sparse measurements of skin strain to wrinkle formation
    from a small set of example poses. Our hybrid method features real-time animation
    of highly-detailed faces with realistic wrinkle formation, and allows both large-scale
    deformations and fine-scale wrinkles to be edited intuitively. Furthermore, our
    pose-space representation enables the transfer of facial details to novel expressions
    or other facial models.'
acknowledgement: This research was supported by the NCCR Co-Me of the Swiss National
  Science Foundation.
author:
- first_name: Bernd
  full_name: Bickel, Bernd
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
- first_name: Manuel
  full_name: Lang, Manuel
  last_name: Lang
- first_name: Mario
  full_name: Botsch, Mario
  last_name: Botsch
- first_name: Miguel
  full_name: Otaduy, Miguel
  last_name: Otaduy
- first_name: Markus
  full_name: Gross, Markus
  last_name: Gross
citation:
  ama: 'Bickel B, Lang M, Botsch M, Otaduy M, Gross M. Pose-space animation and transfer
    of facial details. In: ACM; 2008:57-66. doi:<a href="https://doi.org/10.2312/SCA/SCA08/057-066">10.2312/SCA/SCA08/057-066</a>'
  apa: 'Bickel, B., Lang, M., Botsch, M., Otaduy, M., &#38; Gross, M. (2008). Pose-space
    animation and transfer of facial details (pp. 57–66). Presented at the SIGGRAPH:
    Eurographics Symposium on Computer Animation, ACM. <a href="https://doi.org/10.2312/SCA/SCA08/057-066">https://doi.org/10.2312/SCA/SCA08/057-066</a>'
  chicago: Bickel, Bernd, Manuel Lang, Mario Botsch, Miguel Otaduy, and Markus Gross.
    “Pose-Space Animation and Transfer of Facial Details,” 57–66. ACM, 2008. <a href="https://doi.org/10.2312/SCA/SCA08/057-066">https://doi.org/10.2312/SCA/SCA08/057-066</a>.
  ieee: 'B. Bickel, M. Lang, M. Botsch, M. Otaduy, and M. Gross, “Pose-space animation
    and transfer of facial details,” presented at the SIGGRAPH: Eurographics Symposium
    on Computer Animation, 2008, pp. 57–66.'
  ista: 'Bickel B, Lang M, Botsch M, Otaduy M, Gross M. 2008. Pose-space animation
    and transfer of facial details. SIGGRAPH: Eurographics Symposium on Computer Animation,
    57–66.'
  mla: Bickel, Bernd, et al. <i>Pose-Space Animation and Transfer of Facial Details</i>.
    ACM, 2008, pp. 57–66, doi:<a href="https://doi.org/10.2312/SCA/SCA08/057-066">10.2312/SCA/SCA08/057-066</a>.
  short: B. Bickel, M. Lang, M. Botsch, M. Otaduy, M. Gross, in:, ACM, 2008, pp. 57–66.
conference:
  name: 'SIGGRAPH: Eurographics Symposium on Computer Animation'
date_created: 2018-12-11T11:55:35Z
date_published: 2008-01-01T00:00:00Z
date_updated: 2021-01-12T06:55:10Z
doi: 10.2312/SCA/SCA08/057-066
extern: '1'
language:
- iso: eng
oa_version: None
page: 57  - 66
publication_status: published
publisher: ACM
publist_id: '4960'
status: public
title: Pose-space animation and transfer of facial details
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2008'
...
---
_id: '1967'
abstract:
- lang: eng
  text: Complex I of respiratory chains transfers electrons from NADH to ubiquinone,
    coupled to the translocation of protons across the membrane. Two alternative coupling
    mechanisms are being discussed, redox-driven or conformation-driven. Using &quot;zero-length&quot;
    cross-linking reagent and isolated hydrophilic domains of complex I from Escherichia
    coli and Thermus thermophilus, we show that the pattern of cross-links between
    subunits changes significantly in the presence of NADH. Similar observations were
    made previously with intact purified E. coli and bovine complex I. This indicates
    that, upon reduction with NADH, similar conformational changes are likely to occur
    in the intact enzyme and in the isolated hydrophilic domain (which can be used
    for crystallographic studies). Within intact E. coli complex I, the cross-link
    between the hydrophobic subunits NuoA and NuoJ was abolished in the presence of
    NADH, indicating that conformational changes extend into the membrane domain,
    possibly as part of a coupling mechanism. Unexpectedly, in the absence of any
    chemical cross-linker, incubation of complex I with NADH resulted in covalent
    cross-links between subunits Nqo4 (NuoCD) and Nqo6 (NuoB), as well as between
    Nqo6 and Nqo9. Their formation depends on the presence of oxygen and so is likely
    a result of oxidative damage via reactive oxygen species (ROS) induced cross-linking.
    In addition, ROS- and metal ion-dependent proteolysis of these subunits (as well
    as Nqo3) is observed. Fe-S cluster N2 is coordinated between subunits Nqo4 and
    Nqo6 and could be involved in these processes. Our observations suggest that oxidative
    damage to complex I in vivo may include not only side-chain modifications but
    also protein cross-linking and degradation.
acknowledgement: This research was funded by the Medical Research Council.
author:
- first_name: John
  full_name: Berrisford, John M
  last_name: Berrisford
- first_name: Christopher
  full_name: Thompson, Christopher J
  last_name: Thompson
- first_name: Leonid A
  full_name: Leonid Sazanov
  id: 338D39FE-F248-11E8-B48F-1D18A9856A87
  last_name: Sazanov
  orcid: 0000-0002-0977-7989
citation:
  ama: Berrisford J, Thompson C, Sazanov LA. Chemical and NADH-induced, ROS-dependent,
    cross-linking between sublimits of complex I from Escherichia coli and Thermus
    thermophilus. <i>Biochemistry</i>. 2008;47(39):10262-10270. doi:<a href="https://doi.org/10.1021/bi801160u">10.1021/bi801160u</a>
  apa: Berrisford, J., Thompson, C., &#38; Sazanov, L. A. (2008). Chemical and NADH-induced,
    ROS-dependent, cross-linking between sublimits of complex I from Escherichia coli
    and Thermus thermophilus. <i>Biochemistry</i>. ACS. <a href="https://doi.org/10.1021/bi801160u">https://doi.org/10.1021/bi801160u</a>
  chicago: Berrisford, John, Christopher Thompson, and Leonid A Sazanov. “Chemical
    and NADH-Induced, ROS-Dependent, Cross-Linking between Sublimits of Complex I
    from Escherichia Coli and Thermus Thermophilus.” <i>Biochemistry</i>. ACS, 2008.
    <a href="https://doi.org/10.1021/bi801160u">https://doi.org/10.1021/bi801160u</a>.
  ieee: J. Berrisford, C. Thompson, and L. A. Sazanov, “Chemical and NADH-induced,
    ROS-dependent, cross-linking between sublimits of complex I from Escherichia coli
    and Thermus thermophilus,” <i>Biochemistry</i>, vol. 47, no. 39. ACS, pp. 10262–10270,
    2008.
  ista: Berrisford J, Thompson C, Sazanov LA. 2008. Chemical and NADH-induced, ROS-dependent,
    cross-linking between sublimits of complex I from Escherichia coli and Thermus
    thermophilus. Biochemistry. 47(39), 10262–10270.
  mla: Berrisford, John, et al. “Chemical and NADH-Induced, ROS-Dependent, Cross-Linking
    between Sublimits of Complex I from Escherichia Coli and Thermus Thermophilus.”
    <i>Biochemistry</i>, vol. 47, no. 39, ACS, 2008, pp. 10262–70, doi:<a href="https://doi.org/10.1021/bi801160u">10.1021/bi801160u</a>.
  short: J. Berrisford, C. Thompson, L.A. Sazanov, Biochemistry 47 (2008) 10262–10270.
date_created: 2018-12-11T11:54:57Z
date_published: 2008-09-30T00:00:00Z
date_updated: 2021-01-12T06:54:24Z
day: '30'
doi: 10.1021/bi801160u
extern: 1
intvolume: '        47'
issue: '39'
month: '09'
page: 10262 - 10270
publication: Biochemistry
publication_status: published
publisher: ACS
publist_id: '5115'
quality_controlled: 0
status: public
title: Chemical and NADH-induced, ROS-dependent, cross-linking between sublimits of
  complex I from Escherichia coli and Thermus thermophilus
type: journal_article
volume: 47
year: '2008'
...
---
_id: '1968'
abstract:
- lang: eng
  text: |2-


    Complex I (NADH:ubiquinone oxidoreductase) is the largest protein complex of bacterial and mitochondrial respiratory chains. The first three-dimensional structure of bacterial complex I in vitrified ice was determined by electron cryo-microscopy and single particle analysis. The structure of the Escherichia coli enzyme incubated with either NAD+ (as a reference) or NADH was calculated to 35 and 39 Å resolution, respectively. The X-ray structure of the peripheral arm of Thermus thermophilus complex I was docked into the reference EM structure. The model obtained indicates that Fe-S cluster N2 is close to the membrane domain interface, allowing for effective electron transfer to membrane-embedded quinone. At the current resolution, the structures in the presence of NAD+ or NADH are similar. Additionally, side-view class averages were calculated for the negatively stained bovine enzyme. The structures of bovine complex I in the presence of either NAD+ or NADH also appeared to be similar. These observations indicate that conformational changes upon reduction with NADH, suggested to occur by a range of studies, are smaller than had been thought previously. The model of the entire bacterial complex I could be built from the crystal structures of subcomplexes using the EM envelope described here.
acknowledgement: This work was supported by the Medical Research Council.
author:
- first_name: David
  full_name: Morgan, David J
  last_name: Morgan
- first_name: Leonid A
  full_name: Leonid Sazanov
  id: 338D39FE-F248-11E8-B48F-1D18A9856A87
  last_name: Sazanov
  orcid: 0000-0002-0977-7989
citation:
  ama: Morgan D, Sazanov LA. Three-dimensional structure of respiratory complex I
    from Escherichia coli in ice in the presence of nucleotides. <i>Biochimica et
    Biophysica Acta - Bioenergetics</i>. 2008;1777(7-8):711-718. doi:<a href="https://doi.org/10.1016/j.bbabio.2008.03.023">10.1016/j.bbabio.2008.03.023</a>
  apa: Morgan, D., &#38; Sazanov, L. A. (2008). Three-dimensional structure of respiratory
    complex I from Escherichia coli in ice in the presence of nucleotides. <i>Biochimica
    et Biophysica Acta - Bioenergetics</i>. Elsevier. <a href="https://doi.org/10.1016/j.bbabio.2008.03.023">https://doi.org/10.1016/j.bbabio.2008.03.023</a>
  chicago: Morgan, David, and Leonid A Sazanov. “Three-Dimensional Structure of Respiratory
    Complex I from Escherichia Coli in Ice in the Presence of Nucleotides.” <i>Biochimica
    et Biophysica Acta - Bioenergetics</i>. Elsevier, 2008. <a href="https://doi.org/10.1016/j.bbabio.2008.03.023">https://doi.org/10.1016/j.bbabio.2008.03.023</a>.
  ieee: D. Morgan and L. A. Sazanov, “Three-dimensional structure of respiratory complex
    I from Escherichia coli in ice in the presence of nucleotides,” <i>Biochimica
    et Biophysica Acta - Bioenergetics</i>, vol. 1777, no. 7–8. Elsevier, pp. 711–718,
    2008.
  ista: Morgan D, Sazanov LA. 2008. Three-dimensional structure of respiratory complex
    I from Escherichia coli in ice in the presence of nucleotides. Biochimica et Biophysica
    Acta - Bioenergetics. 1777(7–8), 711–718.
  mla: Morgan, David, and Leonid A. Sazanov. “Three-Dimensional Structure of Respiratory
    Complex I from Escherichia Coli in Ice in the Presence of Nucleotides.” <i>Biochimica
    et Biophysica Acta - Bioenergetics</i>, vol. 1777, no. 7–8, Elsevier, 2008, pp.
    711–18, doi:<a href="https://doi.org/10.1016/j.bbabio.2008.03.023">10.1016/j.bbabio.2008.03.023</a>.
  short: D. Morgan, L.A. Sazanov, Biochimica et Biophysica Acta - Bioenergetics 1777
    (2008) 711–718.
date_created: 2018-12-11T11:54:58Z
date_published: 2008-07-01T00:00:00Z
date_updated: 2021-01-12T06:54:24Z
day: '01'
doi: 10.1016/j.bbabio.2008.03.023
extern: 1
intvolume: '      1777'
issue: 7-8
month: '07'
page: 711 - 718
publication: Biochimica et Biophysica Acta - Bioenergetics
publication_status: published
publisher: Elsevier
publist_id: '5116'
quality_controlled: 0
status: public
title: Three-dimensional structure of respiratory complex I from Escherichia coli
  in ice in the presence of nucleotides
type: journal_article
volume: 1777
year: '2008'
...
---
_id: '11109'
abstract:
- lang: eng
  text: The nuclear envelope (NE) provides a selective barrier between the nuclear
    interior and the cytoplasm and constitutes a central component of intracellular
    architecture. During mitosis in metazoa, the NE breaks down leading to the complete
    mixing of the nuclear content with the cytosol. Interestingly, many NE components
    actively participate in mitotic progression. After chromosome segregation, the
    NE is reassembled around decondensing chromatin and the nuclear compartment is
    reestablished in the daughter cells. Here, we summarize recent progress in deciphering
    the molecular mechanisms underlying NE dynamics during cell division.
article_processing_charge: No
article_type: original
author:
- first_name: Ulrike
  full_name: Kutay, Ulrike
  last_name: Kutay
- first_name: Martin W
  full_name: HETZER, Martin W
  id: 86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed
  last_name: HETZER
  orcid: 0000-0002-2111-992X
citation:
  ama: Kutay U, Hetzer M. Reorganization of the nuclear envelope during open mitosis.
    <i>Current Opinion in Cell Biology</i>. 2008;20(6):669-677. doi:<a href="https://doi.org/10.1016/j.ceb.2008.09.010">10.1016/j.ceb.2008.09.010</a>
  apa: Kutay, U., &#38; Hetzer, M. (2008). Reorganization of the nuclear envelope
    during open mitosis. <i>Current Opinion in Cell Biology</i>. Elsevier. <a href="https://doi.org/10.1016/j.ceb.2008.09.010">https://doi.org/10.1016/j.ceb.2008.09.010</a>
  chicago: Kutay, Ulrike, and Martin Hetzer. “Reorganization of the Nuclear Envelope
    during Open Mitosis.” <i>Current Opinion in Cell Biology</i>. Elsevier, 2008.
    <a href="https://doi.org/10.1016/j.ceb.2008.09.010">https://doi.org/10.1016/j.ceb.2008.09.010</a>.
  ieee: U. Kutay and M. Hetzer, “Reorganization of the nuclear envelope during open
    mitosis,” <i>Current Opinion in Cell Biology</i>, vol. 20, no. 6. Elsevier, pp.
    669–677, 2008.
  ista: Kutay U, Hetzer M. 2008. Reorganization of the nuclear envelope during open
    mitosis. Current Opinion in Cell Biology. 20(6), 669–677.
  mla: Kutay, Ulrike, and Martin Hetzer. “Reorganization of the Nuclear Envelope during
    Open Mitosis.” <i>Current Opinion in Cell Biology</i>, vol. 20, no. 6, Elsevier,
    2008, pp. 669–77, doi:<a href="https://doi.org/10.1016/j.ceb.2008.09.010">10.1016/j.ceb.2008.09.010</a>.
  short: U. Kutay, M. Hetzer, Current Opinion in Cell Biology 20 (2008) 669–677.
date_created: 2022-04-07T07:55:00Z
date_published: 2008-12-01T00:00:00Z
date_updated: 2024-10-14T11:29:10Z
day: '01'
doi: 10.1016/j.ceb.2008.09.010
extern: '1'
external_id:
  pmid:
  - '18938243'
intvolume: '        20'
issue: '6'
keyword:
- Cell Biology
language:
- iso: eng
month: '12'
oa_version: None
page: 669-677
pmid: 1
publication: Current Opinion in Cell Biology
publication_identifier:
  issn:
  - 0955-0674
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Reorganization of the nuclear envelope during open mitosis
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 20
year: '2008'
...
---
_id: '11110'
abstract:
- lang: eng
  text: Nuclear pore complexes are large aqueous channels that penetrate the nuclear
    envelope, thereby connecting the nuclear interior with the cytoplasm. Until recently,
    these macromolecular complexes were viewed as static structures, the only function
    of which was to control the molecular trafficking between the two compartments.
    It has now become evident that this simplistic scenario is inaccurate and that
    nuclear pore complexes are highly dynamic multiprotein assemblies involved in
    diverse cellular processes ranging from the organization of the cytoskeleton to
    gene expression. In this review, we discuss the most recent developments in the
    nuclear-pore-complex field, focusing on the assembly, disassembly, maintenance
    and function of this macromolecular structure.
article_processing_charge: No
article_type: review
author:
- first_name: Maximiliano A.
  full_name: D’Angelo, Maximiliano A.
  last_name: D’Angelo
- first_name: Martin W
  full_name: HETZER, Martin W
  id: 86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed
  last_name: HETZER
  orcid: 0000-0002-2111-992X
citation:
  ama: D’Angelo MA, Hetzer M. Structure, dynamics and function of nuclear pore complexes.
    <i>Trends in Cell Biology</i>. 2008;18(10):456-466. doi:<a href="https://doi.org/10.1016/j.tcb.2008.07.009">10.1016/j.tcb.2008.07.009</a>
  apa: D’Angelo, M. A., &#38; Hetzer, M. (2008). Structure, dynamics and function
    of nuclear pore complexes. <i>Trends in Cell Biology</i>. Elsevier. <a href="https://doi.org/10.1016/j.tcb.2008.07.009">https://doi.org/10.1016/j.tcb.2008.07.009</a>
  chicago: D’Angelo, Maximiliano A., and Martin Hetzer. “Structure, Dynamics and Function
    of Nuclear Pore Complexes.” <i>Trends in Cell Biology</i>. Elsevier, 2008. <a
    href="https://doi.org/10.1016/j.tcb.2008.07.009">https://doi.org/10.1016/j.tcb.2008.07.009</a>.
  ieee: M. A. D’Angelo and M. Hetzer, “Structure, dynamics and function of nuclear
    pore complexes,” <i>Trends in Cell Biology</i>, vol. 18, no. 10. Elsevier, pp.
    456–466, 2008.
  ista: D’Angelo MA, Hetzer M. 2008. Structure, dynamics and function of nuclear pore
    complexes. Trends in Cell Biology. 18(10), 456–466.
  mla: D’Angelo, Maximiliano A., and Martin Hetzer. “Structure, Dynamics and Function
    of Nuclear Pore Complexes.” <i>Trends in Cell Biology</i>, vol. 18, no. 10, Elsevier,
    2008, pp. 456–66, doi:<a href="https://doi.org/10.1016/j.tcb.2008.07.009">10.1016/j.tcb.2008.07.009</a>.
  short: M.A. D’Angelo, M. Hetzer, Trends in Cell Biology 18 (2008) 456–466.
date_created: 2022-04-07T07:55:10Z
date_published: 2008-10-01T00:00:00Z
date_updated: 2024-10-14T11:29:21Z
day: '01'
doi: 10.1016/j.tcb.2008.07.009
extern: '1'
external_id:
  pmid:
  - '18786826'
intvolume: '        18'
issue: '10'
keyword:
- Cell Biology
language:
- iso: eng
month: '10'
oa_version: None
page: 456-466
pmid: 1
publication: Trends in Cell Biology
publication_identifier:
  issn:
  - 0962-8924
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Structure, dynamics and function of nuclear pore complexes
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 18
year: '2008'
...
---
_id: '11111'
abstract:
- lang: eng
  text: During mitosis in metazoans, segregated chromosomes become enclosed by the
    nuclear envelope (NE), a double membrane that is continuous with the endoplasmic
    reticulum (ER). Recent in vitro data suggest that NE formation occurs by chromatin-mediated
    reorganization of the tubular ER; however, the basic principles of such a membrane-reshaping
    process remain uncharacterized. Here, we present a quantitative analysis of nuclear
    membrane assembly in mammalian cells using time-lapse microscopy. From the initial
    recruitment of ER tubules to chromatin, the formation of a membrane-enclosed,
    transport-competent nucleus occurs within ∼12 min. Overexpression of the ER tubule-forming
    proteins reticulon 3, reticulon 4, and DP1 inhibits NE formation and nuclear expansion,
    whereas their knockdown accelerates nuclear assembly. This suggests that the transition
    from membrane tubules to sheets is rate-limiting for nuclear assembly. Our results
    provide evidence that ER-shaping proteins are directly involved in the reconstruction
    of the nuclear compartment and that morphological restructuring of the ER is the
    principal mechanism of NE formation in vivo.
article_processing_charge: No
article_type: original
author:
- first_name: Daniel J.
  full_name: Anderson, Daniel J.
  last_name: Anderson
- first_name: Martin W
  full_name: HETZER, Martin W
  id: 86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed
  last_name: HETZER
  orcid: 0000-0002-2111-992X
citation:
  ama: Anderson DJ, Hetzer M. Reshaping of the endoplasmic reticulum limits the rate
    for nuclear envelope formation. <i>Journal of Cell Biology</i>. 2008;182(5):911-924.
    doi:<a href="https://doi.org/10.1083/jcb.200805140">10.1083/jcb.200805140</a>
  apa: Anderson, D. J., &#38; Hetzer, M. (2008). Reshaping of the endoplasmic reticulum
    limits the rate for nuclear envelope formation. <i>Journal of Cell Biology</i>.
    Rockefeller University Press. <a href="https://doi.org/10.1083/jcb.200805140">https://doi.org/10.1083/jcb.200805140</a>
  chicago: Anderson, Daniel J., and Martin Hetzer. “Reshaping of the Endoplasmic Reticulum
    Limits the Rate for Nuclear Envelope Formation.” <i>Journal of Cell Biology</i>.
    Rockefeller University Press, 2008. <a href="https://doi.org/10.1083/jcb.200805140">https://doi.org/10.1083/jcb.200805140</a>.
  ieee: D. J. Anderson and M. Hetzer, “Reshaping of the endoplasmic reticulum limits
    the rate for nuclear envelope formation,” <i>Journal of Cell Biology</i>, vol.
    182, no. 5. Rockefeller University Press, pp. 911–924, 2008.
  ista: Anderson DJ, Hetzer M. 2008. Reshaping of the endoplasmic reticulum limits
    the rate for nuclear envelope formation. Journal of Cell Biology. 182(5), 911–924.
  mla: Anderson, Daniel J., and Martin Hetzer. “Reshaping of the Endoplasmic Reticulum
    Limits the Rate for Nuclear Envelope Formation.” <i>Journal of Cell Biology</i>,
    vol. 182, no. 5, Rockefeller University Press, 2008, pp. 911–24, doi:<a href="https://doi.org/10.1083/jcb.200805140">10.1083/jcb.200805140</a>.
  short: D.J. Anderson, M. Hetzer, Journal of Cell Biology 182 (2008) 911–924.
date_created: 2022-04-07T07:55:23Z
date_published: 2008-09-08T00:00:00Z
date_updated: 2024-10-14T11:29:29Z
day: '08'
doi: 10.1083/jcb.200805140
extern: '1'
external_id:
  pmid:
  - '18779370'
intvolume: '       182'
issue: '5'
keyword:
- Cell Biology
language:
- iso: eng
month: '09'
oa_version: None
page: 911-924
pmid: 1
publication: Journal of Cell Biology
publication_identifier:
  eissn:
  - 1540-8140
  issn:
  - 0021-9525
publication_status: published
publisher: Rockefeller University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Reshaping of the endoplasmic reticulum limits the rate for nuclear envelope
  formation
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 182
year: '2008'
...
---
_id: '11112'
abstract:
- lang: eng
  text: The nuclear envelope is a double-layered membrane that encloses the nuclear
    genome and transcriptional machinery. In dividing cells of metazoa, the nucleus
    completely disassembles during mitosis, creating the need to re-establish the
    nuclear compartment at the end of each cell division. Given the crucial role of
    the nuclear envelope in gene regulation and cellular organization, it is not surprising
    that its biogenesis and organization have become active research areas. We will
    review recent insights into nuclear membrane dynamics during the cell cycle.
article_processing_charge: No
article_type: original
author:
- first_name: Daniel J
  full_name: Anderson, Daniel J
  last_name: Anderson
- first_name: Martin W
  full_name: HETZER, Martin W
  id: 86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed
  last_name: HETZER
  orcid: 0000-0002-2111-992X
citation:
  ama: Anderson DJ, Hetzer M. The life cycle of the metazoan nuclear envelope. <i>Current
    Opinion in Cell Biology</i>. 2008;20(4):386-392. doi:<a href="https://doi.org/10.1016/j.ceb.2008.03.016">10.1016/j.ceb.2008.03.016</a>
  apa: Anderson, D. J., &#38; Hetzer, M. (2008). The life cycle of the metazoan nuclear
    envelope. <i>Current Opinion in Cell Biology</i>. Elsevier. <a href="https://doi.org/10.1016/j.ceb.2008.03.016">https://doi.org/10.1016/j.ceb.2008.03.016</a>
  chicago: Anderson, Daniel J, and Martin Hetzer. “The Life Cycle of the Metazoan
    Nuclear Envelope.” <i>Current Opinion in Cell Biology</i>. Elsevier, 2008. <a
    href="https://doi.org/10.1016/j.ceb.2008.03.016">https://doi.org/10.1016/j.ceb.2008.03.016</a>.
  ieee: D. J. Anderson and M. Hetzer, “The life cycle of the metazoan nuclear envelope,”
    <i>Current Opinion in Cell Biology</i>, vol. 20, no. 4. Elsevier, pp. 386–392,
    2008.
  ista: Anderson DJ, Hetzer M. 2008. The life cycle of the metazoan nuclear envelope.
    Current Opinion in Cell Biology. 20(4), 386–392.
  mla: Anderson, Daniel J., and Martin Hetzer. “The Life Cycle of the Metazoan Nuclear
    Envelope.” <i>Current Opinion in Cell Biology</i>, vol. 20, no. 4, Elsevier, 2008,
    pp. 386–92, doi:<a href="https://doi.org/10.1016/j.ceb.2008.03.016">10.1016/j.ceb.2008.03.016</a>.
  short: D.J. Anderson, M. Hetzer, Current Opinion in Cell Biology 20 (2008) 386–392.
date_created: 2022-04-07T07:55:34Z
date_published: 2008-08-01T00:00:00Z
date_updated: 2024-10-14T11:29:38Z
day: '01'
doi: 10.1016/j.ceb.2008.03.016
extern: '1'
external_id:
  pmid:
  - '18495454'
intvolume: '        20'
issue: '4'
keyword:
- Cell Biology
language:
- iso: eng
month: '08'
oa_version: None
page: 386-392
pmid: 1
publication: Current Opinion in Cell Biology
publication_identifier:
  issn:
  - 0955-0674
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: The life cycle of the metazoan nuclear envelope
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 20
year: '2008'
...
---
_id: '11113'
abstract:
- lang: eng
  text: The nuclear envelope (NE), a double membrane enclosing the nucleus of eukaryotic
    cells, controls the flow of information between the nucleoplasm and the cytoplasm
    and provides a scaffold for the organization of chromatin and the cytoskeleton.
    In dividing metazoan cells, the NE breaks down at the onset of mitosis and then
    reforms around segregated chromosomes to generate the daughter nuclei. Recent
    data from intact cells and cell-free nuclear assembly systems suggest that the
    endoplasmic reticulum (ER) is the source of membrane for NE assembly. At the end
    of mitosis, ER membrane tubules are targeted to chromatin via tubule ends and
    reorganized into flat nuclear membrane sheets by specific DNA-binding membrane
    proteins. In contrast to previous models, which proposed vesicle fusion to be
    the principal mechanism of NE formation, these new studies suggest that the nuclear
    membrane forms by the chromatin-mediated reshaping of the ER.
article_processing_charge: No
article_type: letter_note
author:
- first_name: Daniel J.
  full_name: Anderson, Daniel J.
  last_name: Anderson
- first_name: Martin W
  full_name: HETZER, Martin W
  id: 86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed
  last_name: HETZER
  orcid: 0000-0002-2111-992X
citation:
  ama: Anderson DJ, Hetzer M. Shaping the endoplasmic reticulum into the nuclear envelope.
    <i>Journal of Cell Science</i>. 2008;121(2):137-142. doi:<a href="https://doi.org/10.1242/jcs.005777">10.1242/jcs.005777</a>
  apa: Anderson, D. J., &#38; Hetzer, M. (2008). Shaping the endoplasmic reticulum
    into the nuclear envelope. <i>Journal of Cell Science</i>. The Company of Biologists.
    <a href="https://doi.org/10.1242/jcs.005777">https://doi.org/10.1242/jcs.005777</a>
  chicago: Anderson, Daniel J., and Martin Hetzer. “Shaping the Endoplasmic Reticulum
    into the Nuclear Envelope.” <i>Journal of Cell Science</i>. The Company of Biologists,
    2008. <a href="https://doi.org/10.1242/jcs.005777">https://doi.org/10.1242/jcs.005777</a>.
  ieee: D. J. Anderson and M. Hetzer, “Shaping the endoplasmic reticulum into the
    nuclear envelope,” <i>Journal of Cell Science</i>, vol. 121, no. 2. The Company
    of Biologists, pp. 137–142, 2008.
  ista: Anderson DJ, Hetzer M. 2008. Shaping the endoplasmic reticulum into the nuclear
    envelope. Journal of Cell Science. 121(2), 137–142.
  mla: Anderson, Daniel J., and Martin Hetzer. “Shaping the Endoplasmic Reticulum
    into the Nuclear Envelope.” <i>Journal of Cell Science</i>, vol. 121, no. 2, The
    Company of Biologists, 2008, pp. 137–42, doi:<a href="https://doi.org/10.1242/jcs.005777">10.1242/jcs.005777</a>.
  short: D.J. Anderson, M. Hetzer, Journal of Cell Science 121 (2008) 137–142.
date_created: 2022-04-07T07:55:46Z
date_published: 2008-01-15T00:00:00Z
date_updated: 2024-10-14T11:29:47Z
day: '15'
doi: 10.1242/jcs.005777
extern: '1'
external_id:
  pmid:
  - '18187447'
intvolume: '       121'
issue: '2'
keyword:
- Cell Biology
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1242/jcs.005777
month: '01'
oa: 1
oa_version: Published Version
page: 137-142
pmid: 1
publication: Journal of Cell Science
publication_identifier:
  eissn:
  - 1477-9137
  issn:
  - 0021-9533
publication_status: published
publisher: The Company of Biologists
quality_controlled: '1'
scopus_import: '1'
status: public
title: Shaping the endoplasmic reticulum into the nuclear envelope
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 121
year: '2008'
...
---
_id: '11114'
abstract:
- lang: eng
  text: We present a miniaturized pull-down method for the detection of protein-protein
    interactions using standard affinity chromatography reagents. Binding events between
    different proteins, which are color-coded with quantum dots (QDs), are visualized
    on single affinity chromatography beads by fluorescence microscopy. The use of
    QDs for single molecule detection allows the simultaneous analysis of multiple
    protein-protein binding events and reduces the amount of time and material needed
    to perform a pull-down experiment.
article_number: e2061
article_processing_charge: No
article_type: original
author:
- first_name: Roberta
  full_name: Schulte, Roberta
  last_name: Schulte
- first_name: Jessica
  full_name: Talamas, Jessica
  last_name: Talamas
- first_name: Christine
  full_name: Doucet, Christine
  last_name: Doucet
- first_name: Martin W
  full_name: HETZER, Martin W
  id: 86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed
  last_name: HETZER
  orcid: 0000-0002-2111-992X
citation:
  ama: Schulte R, Talamas J, Doucet C, Hetzer M. Single bead affinity detection (SINBAD)
    for the analysis of protein-protein interactions. <i>PLoS ONE</i>. 2008;3(4).
    doi:<a href="https://doi.org/10.1371/journal.pone.0002061">10.1371/journal.pone.0002061</a>
  apa: Schulte, R., Talamas, J., Doucet, C., &#38; Hetzer, M. (2008). Single bead
    affinity detection (SINBAD) for the analysis of protein-protein interactions.
    <i>PLoS ONE</i>. Public Library of Science. <a href="https://doi.org/10.1371/journal.pone.0002061">https://doi.org/10.1371/journal.pone.0002061</a>
  chicago: Schulte, Roberta, Jessica Talamas, Christine Doucet, and Martin Hetzer.
    “Single Bead Affinity Detection (SINBAD) for the Analysis of Protein-Protein Interactions.”
    <i>PLoS ONE</i>. Public Library of Science, 2008. <a href="https://doi.org/10.1371/journal.pone.0002061">https://doi.org/10.1371/journal.pone.0002061</a>.
  ieee: R. Schulte, J. Talamas, C. Doucet, and M. Hetzer, “Single bead affinity detection
    (SINBAD) for the analysis of protein-protein interactions,” <i>PLoS ONE</i>, vol.
    3, no. 4. Public Library of Science, 2008.
  ista: Schulte R, Talamas J, Doucet C, Hetzer M. 2008. Single bead affinity detection
    (SINBAD) for the analysis of protein-protein interactions. PLoS ONE. 3(4), e2061.
  mla: Schulte, Roberta, et al. “Single Bead Affinity Detection (SINBAD) for the Analysis
    of Protein-Protein Interactions.” <i>PLoS ONE</i>, vol. 3, no. 4, e2061, Public
    Library of Science, 2008, doi:<a href="https://doi.org/10.1371/journal.pone.0002061">10.1371/journal.pone.0002061</a>.
  short: R. Schulte, J. Talamas, C. Doucet, M. Hetzer, PLoS ONE 3 (2008).
date_created: 2022-04-07T07:55:57Z
date_published: 2008-04-30T00:00:00Z
date_updated: 2024-10-14T11:29:56Z
day: '30'
doi: 10.1371/journal.pone.0002061
extern: '1'
external_id:
  pmid:
  - '18446240'
intvolume: '         3'
issue: '4'
keyword:
- Multidisciplinary
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: ' https://doi.org/10.1371/journal.pone.0002061'
month: '04'
oa: 1
oa_version: Published Version
pmid: 1
publication: PLoS ONE
publication_identifier:
  issn:
  - 1932-6203
publication_status: published
publisher: Public Library of Science
quality_controlled: '1'
scopus_import: '1'
status: public
title: Single bead affinity detection (SINBAD) for the analysis of protein-protein
  interactions
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 3
year: '2008'
...
---
_id: '1036'
abstract:
- lang: eng
  text: We report on the control of interaction-induced dephasing of Bloch oscillations
    for an atomic Bose-Einstein condensate in an optical lattice. We quantify the
    dephasing in terms of the width of the quasimomentum distribution and measure
    its dependence on time for different interaction strengths which we control by
    means of a Feshbach resonance. For minimal interaction, the dephasing time is
    increased from a few to more than 20 thousand Bloch oscillation periods, allowing
    us to realize a BEC-based atom interferometer in the noninteracting limit.
acknowledgement: "We thank A. Daley for theoretical support and for help with\r\nsetting
  \ up the  numerical  calculations  and  A. Buchleitner\r\nand  his  group  for  useful
  \ discussions.  We  are  grateful  to\r\nA. Liem and H. Zellmer for valuable assistance
  in setting\r\nup the 1064 nm fiber amplifier system. We acknowledge\r\ncontributions
  \ by  P.  Unterwaditzer  and  T.  Flir  during  the\r\nearly   stages   of   the
  \  experiment.   We   are   indebted   to\r\nR.  Grimm  for  generous  support  and
  \ gratefully  acknowledge  funding  by  the  Austrian  Ministry  of  Science  and\r\nResearch
  (BMWF) and the Austrian Science Fund (FWF)."
article_processing_charge: No
arxiv: 1
author:
- first_name: Mattias
  full_name: Gustavsson, Mattias
  last_name: Gustavsson
- first_name: Elmar
  full_name: Haller, Elmar
  last_name: Haller
- first_name: Manfred
  full_name: Mark, Manfred
  last_name: Mark
- first_name: Johann G
  full_name: Danzl, Johann G
  id: 42EFD3B6-F248-11E8-B48F-1D18A9856A87
  last_name: Danzl
  orcid: 0000-0001-8559-3973
- first_name: Gabriel
  full_name: Rojas Kopeinig, Gabriel
  last_name: Rojas Kopeinig
- first_name: Hanns
  full_name: Nägerl, Hanns
  last_name: Nägerl
citation:
  ama: Gustavsson M, Haller E, Mark M, Danzl JG, Rojas Kopeinig G, Nägerl H. Control
    of interaction-induced dephasing of bloch oscillations. <i>Physical Review Letters</i>.
    2008;100(8). doi:<a href="https://doi.org/10.1103/PhysRevLett.100.080404">10.1103/PhysRevLett.100.080404</a>
  apa: Gustavsson, M., Haller, E., Mark, M., Danzl, J. G., Rojas Kopeinig, G., &#38;
    Nägerl, H. (2008). Control of interaction-induced dephasing of bloch oscillations.
    <i>Physical Review Letters</i>. American Physical Society. <a href="https://doi.org/10.1103/PhysRevLett.100.080404">https://doi.org/10.1103/PhysRevLett.100.080404</a>
  chicago: Gustavsson, Mattias, Elmar Haller, Manfred Mark, Johann G Danzl, Gabriel
    Rojas Kopeinig, and Hanns Nägerl. “Control of Interaction-Induced Dephasing of
    Bloch Oscillations.” <i>Physical Review Letters</i>. American Physical Society,
    2008. <a href="https://doi.org/10.1103/PhysRevLett.100.080404">https://doi.org/10.1103/PhysRevLett.100.080404</a>.
  ieee: M. Gustavsson, E. Haller, M. Mark, J. G. Danzl, G. Rojas Kopeinig, and H.
    Nägerl, “Control of interaction-induced dephasing of bloch oscillations,” <i>Physical
    Review Letters</i>, vol. 100, no. 8. American Physical Society, 2008.
  ista: Gustavsson M, Haller E, Mark M, Danzl JG, Rojas Kopeinig G, Nägerl H. 2008.
    Control of interaction-induced dephasing of bloch oscillations. Physical Review
    Letters. 100(8).
  mla: Gustavsson, Mattias, et al. “Control of Interaction-Induced Dephasing of Bloch
    Oscillations.” <i>Physical Review Letters</i>, vol. 100, no. 8, American Physical
    Society, 2008, doi:<a href="https://doi.org/10.1103/PhysRevLett.100.080404">10.1103/PhysRevLett.100.080404</a>.
  short: M. Gustavsson, E. Haller, M. Mark, J.G. Danzl, G. Rojas Kopeinig, H. Nägerl,
    Physical Review Letters 100 (2008).
date_created: 2018-12-11T11:49:48Z
date_published: 2008-02-28T00:00:00Z
date_updated: 2021-01-12T06:47:49Z
day: '28'
doi: 10.1103/PhysRevLett.100.080404
extern: '1'
external_id:
  arxiv:
  - '0710.5083'
intvolume: '       100'
issue: '8'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/0710.5083
month: '02'
oa: 1
oa_version: None
publication: Physical Review Letters
publication_status: published
publisher: American Physical Society
publist_id: '6353'
status: public
title: Control of interaction-induced dephasing of bloch oscillations
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 100
year: '2008'
...
---
_id: '1037'
abstract:
- lang: eng
  text: We experimentally demonstrate Cs2 Feshbach molecules well above the dissociation
    threshold, which are stable against spontaneous decay on the time scale of 1s.
    An optically trapped sample of ultracold dimers is prepared in a high rotational
    state and magnetically tuned into a region with a negative binding energy. The
    metastable character of these molecules arises from the large centrifugal barrier
    in combination with negligible coupling to states with low rotational angular
    momentum. A sharp onset of dissociation with increasing magnetic field is mediated
    by a crossing with a lower rotational dimer state and facilitates dissociation
    on demand with a well-defined energy.
acknowledgement: We thank S. Du ̈rr and T. Volz for fruitful discussions. We acknowledge
  support by the Austrian Science Fund (FWF) within No. SFB 15 (project part 16).
  S.K. is supported within the Marie Curie Intra-European Program of the European
  Commission. F.F. is supported within the Lise Meitner program of the FWF.
article_processing_charge: No
arxiv: 1
author:
- first_name: Steven
  full_name: Knoop, Steven
  last_name: Knoop
- first_name: Michael
  full_name: Mark, Michael
  last_name: Mark
- first_name: Francesca
  full_name: Ferlaino, Francesca
  last_name: Ferlaino
- first_name: Johann G
  full_name: Danzl, Johann G
  id: 42EFD3B6-F248-11E8-B48F-1D18A9856A87
  last_name: Danzl
  orcid: 0000-0001-8559-3973
- first_name: Tobias
  full_name: Kraemer, Tobias
  last_name: Kraemer
- first_name: Hanns
  full_name: Nägerl, Hanns
  last_name: Nägerl
- first_name: Rudolf
  full_name: Grimm, Rudolf
  last_name: Grimm
citation:
  ama: Knoop S, Mark M, Ferlaino F, et al. Metastable feshbach molecules in high rotational
    states. <i>Physical Review Letters</i>. 2008;100(8). doi:<a href="https://doi.org/10.1103/PhysRevLett.100.083002">10.1103/PhysRevLett.100.083002</a>
  apa: Knoop, S., Mark, M., Ferlaino, F., Danzl, J. G., Kraemer, T., Nägerl, H., &#38;
    Grimm, R. (2008). Metastable feshbach molecules in high rotational states. <i>Physical
    Review Letters</i>. American Physical Society. <a href="https://doi.org/10.1103/PhysRevLett.100.083002">https://doi.org/10.1103/PhysRevLett.100.083002</a>
  chicago: Knoop, Steven, Michael Mark, Francesca Ferlaino, Johann G Danzl, Tobias
    Kraemer, Hanns Nägerl, and Rudolf Grimm. “Metastable Feshbach Molecules in High
    Rotational States.” <i>Physical Review Letters</i>. American Physical Society,
    2008. <a href="https://doi.org/10.1103/PhysRevLett.100.083002">https://doi.org/10.1103/PhysRevLett.100.083002</a>.
  ieee: S. Knoop <i>et al.</i>, “Metastable feshbach molecules in high rotational
    states,” <i>Physical Review Letters</i>, vol. 100, no. 8. American Physical Society,
    2008.
  ista: Knoop S, Mark M, Ferlaino F, Danzl JG, Kraemer T, Nägerl H, Grimm R. 2008.
    Metastable feshbach molecules in high rotational states. Physical Review Letters.
    100(8).
  mla: Knoop, Steven, et al. “Metastable Feshbach Molecules in High Rotational States.”
    <i>Physical Review Letters</i>, vol. 100, no. 8, American Physical Society, 2008,
    doi:<a href="https://doi.org/10.1103/PhysRevLett.100.083002">10.1103/PhysRevLett.100.083002</a>.
  short: S. Knoop, M. Mark, F. Ferlaino, J.G. Danzl, T. Kraemer, H. Nägerl, R. Grimm,
    Physical Review Letters 100 (2008).
date_created: 2018-12-11T11:49:49Z
date_published: 2008-02-29T00:00:00Z
date_updated: 2021-01-12T06:47:50Z
day: '29'
doi: 10.1103/PhysRevLett.100.083002
extern: '1'
external_id:
  arxiv:
  - '0710.4052'
intvolume: '       100'
issue: '8'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/0710.4052
month: '02'
oa: 1
oa_version: None
publication: Physical Review Letters
publication_status: published
publisher: American Physical Society
publist_id: '6352'
status: public
title: Metastable feshbach molecules in high rotational states
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 100
year: '2008'
...
---
_id: '1039'
abstract:
- lang: eng
  text: Molecular cooling techniques face the hurdle of dissipating translational
    as well as internal energy in the presence of a rich electronic, vibrational,
    and rotational energy spectrum. In our experiment, we create a translationally
    ultracold, dense quantum gas of molecules bound by more than 1000 wave numbers
    in the electronic ground state. Specifically, we stimulate with 80% efficiency,
    a two-photon transfer of molecules associated on a Feshbach resonance from a Bose-Einstein
    condensate of cesium atoms. In the process, the initial loose, long-range electrostatic
    bond of the Feshbach molecule is coherently transformed into a tight chemical
    bond. We demonstrate coherence of the transfer in a Ramsey-type experiment and
    show that the molecular sample is not heated during the transfer. Our results
    show that the preparation of a quantum gas of molecules in specific rovibrational
    states is possible and that the creation of a Bose-Einstein condensate of molecules
    in their rovibronic ground state is within reach.
acknowledgement: " We thank the team of J. Hecker Denschlag, the LevT team in our
  group, and T. Bergeman for very helpful discussions and M. Prevedelli for technical
  assistance. We are indebted to R. Grimm for generous support and gratefully acknowledge
  funding by the Austrian Ministry of Science and Research (Bundesministerium für
  Wissenschaft und Forschung) and the Austrian Science Fund (Fonds zur Förderung der
  wissenschaftlichen Forschung) in the form of a START prize grant and by the European
  Science Foundation in the framework of the EuroQUAM collective research project
  QuDipMol.\r\n"
article_processing_charge: No
arxiv: 1
author:
- first_name: Johann G
  full_name: Danzl, Johann G
  id: 42EFD3B6-F248-11E8-B48F-1D18A9856A87
  last_name: Danzl
  orcid: 0000-0001-8559-3973
- first_name: Elmar
  full_name: Haller, Elmar
  last_name: Haller
- first_name: Mattias
  full_name: Gustavsson, Mattias
  last_name: Gustavsson
- first_name: Manfred
  full_name: Mark, Manfred
  last_name: Mark
- first_name: Russell
  full_name: Hart, Russell
  last_name: Hart
- first_name: Nadia
  full_name: Bouloufa, Nadia
  last_name: Bouloufa
- first_name: Olivier
  full_name: Dulieu, Olivier
  last_name: Dulieu
- first_name: Helmut
  full_name: Ritsch, Helmut
  last_name: Ritsch
- first_name: Hanns
  full_name: Nägerl, Hanns
  last_name: Nägerl
citation:
  ama: Danzl JG, Haller E, Gustavsson M, et al. Quantum gas of deeply bound ground
    state molecules. <i>Science</i>. 2008;321(5892):1062-1066. doi:<a href="https://doi.org/10.1126/science.1159909">10.1126/science.1159909</a>
  apa: Danzl, J. G., Haller, E., Gustavsson, M., Mark, M., Hart, R., Bouloufa, N.,
    … Nägerl, H. (2008). Quantum gas of deeply bound ground state molecules. <i>Science</i>.
    American Association for the Advancement of Science. <a href="https://doi.org/10.1126/science.1159909">https://doi.org/10.1126/science.1159909</a>
  chicago: Danzl, Johann G, Elmar Haller, Mattias Gustavsson, Manfred Mark, Russell
    Hart, Nadia Bouloufa, Olivier Dulieu, Helmut Ritsch, and Hanns Nägerl. “Quantum
    Gas of Deeply Bound Ground State Molecules.” <i>Science</i>. American Association
    for the Advancement of Science, 2008. <a href="https://doi.org/10.1126/science.1159909">https://doi.org/10.1126/science.1159909</a>.
  ieee: J. G. Danzl <i>et al.</i>, “Quantum gas of deeply bound ground state molecules,”
    <i>Science</i>, vol. 321, no. 5892. American Association for the Advancement of
    Science, pp. 1062–1066, 2008.
  ista: Danzl JG, Haller E, Gustavsson M, Mark M, Hart R, Bouloufa N, Dulieu O, Ritsch
    H, Nägerl H. 2008. Quantum gas of deeply bound ground state molecules. Science.
    321(5892), 1062–1066.
  mla: Danzl, Johann G., et al. “Quantum Gas of Deeply Bound Ground State Molecules.”
    <i>Science</i>, vol. 321, no. 5892, American Association for the Advancement of
    Science, 2008, pp. 1062–66, doi:<a href="https://doi.org/10.1126/science.1159909">10.1126/science.1159909</a>.
  short: J.G. Danzl, E. Haller, M. Gustavsson, M. Mark, R. Hart, N. Bouloufa, O. Dulieu,
    H. Ritsch, H. Nägerl, Science 321 (2008) 1062–1066.
date_created: 2018-12-11T11:49:49Z
date_published: 2008-08-22T00:00:00Z
date_updated: 2021-01-12T06:47:50Z
day: '22'
doi: 10.1126/science.1159909
extern: '1'
external_id:
  arxiv:
  - '0806.2284'
intvolume: '       321'
issue: '5892'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://arxiv.org/abs/0806.2284
month: '08'
oa: 1
oa_version: None
page: 1062 - 1066
publication: Science
publication_status: published
publisher: American Association for the Advancement of Science
publist_id: '6351'
status: public
title: Quantum gas of deeply bound ground state molecules
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 321
year: '2008'
...
---
_id: '10392'
abstract:
- lang: eng
  text: Protonated formylmetallocenes [M(C5H5)(C5H4-CHOH)]+ (M = Fe, Ru) and their
    isomers have been studied at the BP86 and B3LYP levels of density functional theory.
    Oxygen-protonated isomers are the most stable forms in each case, with a plethora
    of ring- or metal-protonated species at least ca. 14 and 10 kcal/mol higher in
    energy for M = Fe and Ru, respectively. The computed rotational barriers around
    the C−C bond connecting the cyclopentadienyl and protonated formyl moieties, ca.
    18 kcal/mol, are indicative of substantial conjugation between these moieties.
    Some of the ring- and iron-protonated species are models for possible intermediates
    in Friedel–Crafts acylation of ferrocene, and the computations provide further
    evidence that exo attack is clearly favored over endo attack of the electrophile
    in this reaction. The structures of the most stable mono- and diprotonated formylferrocenes
    are corroborated by the good agreement between GIAO-B3LYP-computed and experimental
    NMR chemical shifts.
acknowledgement: M.B. wishes to thank Prof. W. Thiel and the Max-Planck-Institut für
  Kohlenforschung for continuing support. A Humboldt fellowship for V.V. is gratefully
  acknowledged. Computations were performed on Compaq XP1000 and ES40 workstations
  as well as on an Intel Xeon PC cluster at the MPI Mülheim. A.S. thanks the Computing
  Center of the University of Zagreb SRCE for allocating computer time on the Isabella
  cluster.
article_processing_charge: No
article_type: original
author:
- first_name: Anđela
  full_name: Šarić, Anđela
  id: bf63d406-f056-11eb-b41d-f263a6566d8b
  last_name: Šarić
  orcid: 0000-0002-7854-2139
- first_name: Valerije
  full_name: Vrček, Valerije
  last_name: Vrček
- first_name: Michael
  full_name: Bühl, Michael
  last_name: Bühl
citation:
  ama: Šarić A, Vrček V, Bühl M. Density functional study of protonated formylmetallocenes.
    <i>Organometallics</i>. 2008;27(3):394-401. doi:<a href="https://doi.org/10.1021/om700916f">10.1021/om700916f</a>
  apa: Šarić, A., Vrček, V., &#38; Bühl, M. (2008). Density functional study of protonated
    formylmetallocenes. <i>Organometallics</i>. American Chemical Society. <a href="https://doi.org/10.1021/om700916f">https://doi.org/10.1021/om700916f</a>
  chicago: Šarić, Anđela, Valerije Vrček, and Michael Bühl. “Density Functional Study
    of Protonated Formylmetallocenes.” <i>Organometallics</i>. American Chemical Society,
    2008. <a href="https://doi.org/10.1021/om700916f">https://doi.org/10.1021/om700916f</a>.
  ieee: A. Šarić, V. Vrček, and M. Bühl, “Density functional study of protonated formylmetallocenes,”
    <i>Organometallics</i>, vol. 27, no. 3. American Chemical Society, pp. 394–401,
    2008.
  ista: Šarić A, Vrček V, Bühl M. 2008. Density functional study of protonated formylmetallocenes.
    Organometallics. 27(3), 394–401.
  mla: Šarić, Anđela, et al. “Density Functional Study of Protonated Formylmetallocenes.”
    <i>Organometallics</i>, vol. 27, no. 3, American Chemical Society, 2008, pp. 394–401,
    doi:<a href="https://doi.org/10.1021/om700916f">10.1021/om700916f</a>.
  short: A. Šarić, V. Vrček, M. Bühl, Organometallics 27 (2008) 394–401.
date_created: 2021-11-29T15:31:06Z
date_published: 2008-01-15T00:00:00Z
date_updated: 2021-11-30T08:04:44Z
day: '15'
doi: 10.1021/om700916f
extern: '1'
intvolume: '        27'
issue: '3'
keyword:
- Inorganic Chemistry
- Organic Chemistry
- Physical and Theoretical Chemistry
language:
- iso: eng
main_file_link:
- url: https://pubs.acs.org/doi/10.1021/om700916f
month: '01'
oa_version: None
page: 394-401
publication: Organometallics
publication_identifier:
  eissn:
  - 1520-6041
  issn:
  - 0276-7333
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Density functional study of protonated formylmetallocenes
type: journal_article
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
volume: 27
year: '2008'
...
---
_id: '2120'
abstract:
- lang: eng
  text: 'We consider the linear stochastic Cauchy problem dX (t) =AX (t) dt +B dWH
    (t), t≥ 0, where A generates a C0-semigroup on a Banach space E, WH is a cylindrical
    Brownian motion over a Hilbert space H, and B: H → E is a bounded operator. Assuming
    the existence of a unique minimal invariant measure μ∞, let Lp denote the realization
    of the Ornstein-Uhlenbeck operator associated with this problem in Lp (E, μ∞).
    Under suitable assumptions concerning the invariance of the range of B under the
    semigroup generated by A, we prove the following domain inclusions, valid for
    1 &lt; p ≤ 2: Image omitted. Here WHk, p (E, μinfin; denotes the kth order Sobolev
    space of functions with Fréchet derivatives up to order k in the direction of
    H. No symmetry assumptions are made on L p.'
acknowledgement: The authors are supported by the ‘VIDI subsidie’ 639.032.201 of the
  Netherlands Organization for Scientific Research (NWO) and by the Research Training
  Network HPRN-CT-2002-00281.
author:
- first_name: Jan
  full_name: Jan Maas
  id: 4C5696CE-F248-11E8-B48F-1D18A9856A87
  last_name: Maas
  orcid: 0000-0002-0845-1338
- first_name: Jan
  full_name: van Neerven, Jan M
  last_name: Van Neerven
citation:
  ama: Maas J, Van Neerven J. On the domain of non-symmetric Ornstein-Uhlenbeck operators
    in banach spaces. <i>Infinite Dimensional Analysis, Quantum Probability and Related
    Topics</i>. 2008;11(4):603-626. doi:<a href="https://doi.org/10.1142/S0219025708003245">10.1142/S0219025708003245</a>
  apa: Maas, J., &#38; Van Neerven, J. (2008). On the domain of non-symmetric Ornstein-Uhlenbeck
    operators in banach spaces. <i>Infinite Dimensional Analysis, Quantum Probability
    and Related Topics</i>. World Scientific Publishing. <a href="https://doi.org/10.1142/S0219025708003245">https://doi.org/10.1142/S0219025708003245</a>
  chicago: Maas, Jan, and Jan Van Neerven. “On the Domain of Non-Symmetric Ornstein-Uhlenbeck
    Operators in Banach Spaces.” <i>Infinite Dimensional Analysis, Quantum Probability
    and Related Topics</i>. World Scientific Publishing, 2008. <a href="https://doi.org/10.1142/S0219025708003245">https://doi.org/10.1142/S0219025708003245</a>.
  ieee: J. Maas and J. Van Neerven, “On the domain of non-symmetric Ornstein-Uhlenbeck
    operators in banach spaces,” <i>Infinite Dimensional Analysis, Quantum Probability
    and Related Topics</i>, vol. 11, no. 4. World Scientific Publishing, pp. 603–626,
    2008.
  ista: Maas J, Van Neerven J. 2008. On the domain of non-symmetric Ornstein-Uhlenbeck
    operators in banach spaces. Infinite Dimensional Analysis, Quantum Probability
    and Related Topics. 11(4), 603–626.
  mla: Maas, Jan, and Jan Van Neerven. “On the Domain of Non-Symmetric Ornstein-Uhlenbeck
    Operators in Banach Spaces.” <i>Infinite Dimensional Analysis, Quantum Probability
    and Related Topics</i>, vol. 11, no. 4, World Scientific Publishing, 2008, pp.
    603–26, doi:<a href="https://doi.org/10.1142/S0219025708003245">10.1142/S0219025708003245</a>.
  short: J. Maas, J. Van Neerven, Infinite Dimensional Analysis, Quantum Probability
    and Related Topics 11 (2008) 603–626.
date_created: 2018-12-11T11:55:50Z
date_published: 2008-12-04T00:00:00Z
date_updated: 2021-01-12T06:55:26Z
day: '04'
doi: 10.1142/S0219025708003245
extern: 1
intvolume: '        11'
issue: '4'
main_file_link:
- open_access: '1'
  url: http://repository.tudelft.nl/view/ir/uuid:c8eca915-d38b-4827-a4d9-e89baabb43a6/
month: '12'
oa: 1
page: 603 - 626
publication: Infinite Dimensional Analysis, Quantum Probability and Related Topics
publication_status: published
publisher: World Scientific Publishing
publist_id: '4914'
quality_controlled: 0
status: public
title: On the domain of non-symmetric Ornstein-Uhlenbeck operators in banach spaces
type: journal_article
volume: 11
year: '2008'
...
