---
OA_place: publisher
OA_type: hybrid
_id: '19670'
abstract:
- lang: eng
  text: “Pasta alla Cacio e pepe” is a traditional Italian dish made with pasta, pecorino
    cheese, and pepper. Despite its simple ingredient list, achieving the perfect
    texture and creaminess of the sauce can be challenging. In this study, we systematically
    explore the phase behavior of Cacio e pepe sauce, focusing on its stability at
    increasing temperatures for various proportions of cheese, water, and starch.
    We identify starch concentration as the key factor influencing sauce stability,
    with direct implications for practical cooking. Specifically, we delineate a regime
    where starch concentrations below 1% (relative to cheese mass) lead to the formation
    of system-wide clumps, a condition determining what we term the “Mozzarella Phase”
    and corresponding to an unpleasant and separated sauce. Additionally, we examine
    the impact of cheese concentration relative to water at a fixed starch level,
    observing a lower critical solution temperature that we theoretically rationalized
    by means of a minimal effective free-energy model. We further analyze the effect
    of a less traditional stabilizer, trisodium citrate, and observe a sharp transition
    from the Mozzarella Phase to a completely smooth and stable sauce, in contrast
    to starch-stabilized mixtures, where the transition is more gradual. Finally,
    we present a scientifically optimized recipe based on our findings, enabling a
    consistently flawless execution of this classic dish.
acknowledgement: he authors thank Frank Jülicher, for supporting the initiative and
  stimulating discussions. We thank Tetsuya Spippayashi for enlightening clarifications
  on the historical origins of Cacio e pepe and Giuseppe Ricchitelli for helping with
  the construction of the experimental apparatus. We further thank Martina Gaiba,
  Alessandro Gaiba, John D. Treado, Virginia Lepore, Eleonora Nanu, Julia Kirsch,
  Lara Koehler, Burak Budanur, Irina Pi-Jaumà, Elizabeth Brückner, M.J. Franco Oñate,
  Giorgio Nicoletti, and Marco Salvalaglio for their support and for eating up the
  sample leftovers. Finally, we thank Simone Frau for taking the photograph in Fig.
  1(a).
article_number: '044122'
article_processing_charge: Yes (in subscription journal)
article_type: original
arxiv: 1
author:
- first_name: G.
  full_name: Bartolucci, G.
  last_name: Bartolucci
- first_name: D. M.
  full_name: Busiello, D. M.
  last_name: Busiello
- first_name: M.
  full_name: Ciarchi, M.
  last_name: Ciarchi
- first_name: A.
  full_name: Corticelli, A.
  last_name: Corticelli
- first_name: I.
  full_name: Di Terlizzi, I.
  last_name: Di Terlizzi
- first_name: Fabrizio
  full_name: Olmeda, Fabrizio
  id: 69dbf5fb-8a76-11ed-866b-fb486d8b5689
  last_name: Olmeda
- first_name: D.
  full_name: Revignas, D.
  last_name: Revignas
- first_name: V. M.
  full_name: Schimmenti, V. M.
  last_name: Schimmenti
citation:
  ama: Bartolucci G, Busiello DM, Ciarchi M, et al. Phase behavior of Cacio e Pepe
    sauce. <i>Physics of Fluids</i>. 2025;37(4). doi:<a href="https://doi.org/10.1063/5.0255841">10.1063/5.0255841</a>
  apa: Bartolucci, G., Busiello, D. M., Ciarchi, M., Corticelli, A., Di Terlizzi,
    I., Olmeda, F., … Schimmenti, V. M. (2025). Phase behavior of Cacio e Pepe sauce.
    <i>Physics of Fluids</i>. AIP Publishing. <a href="https://doi.org/10.1063/5.0255841">https://doi.org/10.1063/5.0255841</a>
  chicago: Bartolucci, G., D. M. Busiello, M. Ciarchi, A. Corticelli, I. Di Terlizzi,
    Fabrizio Olmeda, D. Revignas, and V. M. Schimmenti. “Phase Behavior of Cacio e
    Pepe Sauce.” <i>Physics of Fluids</i>. AIP Publishing, 2025. <a href="https://doi.org/10.1063/5.0255841">https://doi.org/10.1063/5.0255841</a>.
  ieee: G. Bartolucci <i>et al.</i>, “Phase behavior of Cacio e Pepe sauce,” <i>Physics
    of Fluids</i>, vol. 37, no. 4. AIP Publishing, 2025.
  ista: Bartolucci G, Busiello DM, Ciarchi M, Corticelli A, Di Terlizzi I, Olmeda
    F, Revignas D, Schimmenti VM. 2025. Phase behavior of Cacio e Pepe sauce. Physics
    of Fluids. 37(4), 044122.
  mla: Bartolucci, G., et al. “Phase Behavior of Cacio e Pepe Sauce.” <i>Physics of
    Fluids</i>, vol. 37, no. 4, 044122, AIP Publishing, 2025, doi:<a href="https://doi.org/10.1063/5.0255841">10.1063/5.0255841</a>.
  short: G. Bartolucci, D.M. Busiello, M. Ciarchi, A. Corticelli, I. Di Terlizzi,
    F. Olmeda, D. Revignas, V.M. Schimmenti, Physics of Fluids 37 (2025).
date_created: 2025-05-11T22:02:40Z
date_published: 2025-04-01T00:00:00Z
date_updated: 2026-04-28T13:24:53Z
day: '01'
ddc:
- '530'
department:
- _id: EdHa
doi: 10.1063/5.0255841
external_id:
  arxiv:
  - '2501.00536'
  isi:
  - '001482986200001'
file:
- access_level: open_access
  checksum: 242d05898aa0a2348b9c108747adb5ce
  content_type: application/pdf
  creator: dernst
  date_created: 2025-05-12T09:31:22Z
  date_updated: 2025-05-12T09:31:22Z
  file_id: '19681'
  file_name: 2025_PhysicsFluids_Bartolucci.pdf
  file_size: 4926853
  relation: main_file
  success: 1
file_date_updated: 2025-05-12T09:31:22Z
has_accepted_license: '1'
intvolume: '        37'
isi: 1
issue: '4'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
publication: Physics of Fluids
publication_identifier:
  eissn:
  - 1089-7666
  issn:
  - 1070-6631
publication_status: published
publisher: AIP Publishing
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA
    relation: press_release
    url: https://ista.ac.at/en/news/2025-ig-nobel-prize-for-perfect-pasta-sauce/
scopus_import: '1'
status: public
title: Phase behavior of Cacio e Pepe sauce
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 37
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '20082'
abstract:
- lang: eng
  text: Efficient immune responses rely on the capacity of leukocytes to traverse
    diverse and complex tissues. To meet such changing environmental conditions, leukocytes
    usually adopt an ameboid configuration, using their forward-positioned nucleus
    as a probe to identify and follow the path of least resistance among pre-existing
    pores. We show that, in dense environments where even the largest pores preclude
    free passage, leukocytes position their nucleus behind the centrosome and organelles.
    The local compression imposed on the cell body by its surroundings triggers assembly
    of a central F-actin pool, located between cell front and nucleus. Central actin
    pushes outward to transiently dilate a path for organelles and nucleus. Pools
    of central and front actin are tightly coupled and experimental depletion of the
    central pool enhances actin accumulation and protrusion formation at the cell
    front. Although this shifted balance speeds up cells in permissive environments,
    migration in restrictive environments is impaired, as the unleashed leading edge
    dissociates from the trapped cell body. Our findings establish an actin regulatory
    loop that balances path dilation with advancement of the leading edge to maintain
    cellular coherence.
acknowledged_ssus:
- _id: Bio
- _id: LifeSc
acknowledgement: This research was supported by the Scientific Service Units of ISTA
  through resources provided by the Imaging and Optics, Preclinical and Lab Support
  Facilities. In particular, we thank M. A. Symth and F. G. G. Leite, from the Virus
  Service Team, who helped generating the lentiviral particles used in this study.
  We thank all the members of the Sixt group for valuable discussions and feedback,
  in particular, I. Mayer, for helping with T cell isolation and Z. (P.) Li for providing
  the Actin–GFP DC line. We are also thankful to J. Mandl and C. Shen for their feedback
  during the writing of this manuscript. This work was supported by a European Research
  Council grant ERC-SyG 101071793 to M.S. M.J.A. was supported by an HFSP Postdoctoral
  Fellowship LTF 177 2021 and A.J.G. by a Lise Meitner Fellowship of the FWF (Austrian
  Science Fund). Y.F. was supported by the AMED-CREST (JP19gm1310005), the Medical
  Research Center Initiative for High Depth Omics and CURE:JPMXP1323015486 for MIB,
  Kyushu University. Open access funding provided by Institute of Science and Technology
  (IST Austria).
article_processing_charge: Yes (via OA deal)
article_type: letter_note
author:
- first_name: Patricia
  full_name: Dos Reis Rodrigues, Patricia
  id: 26E95904-5160-11E9-9C0B-C5B0DC97E90F
  last_name: Dos Reis Rodrigues
  orcid: 0000-0003-1681-508X
- first_name: Mario
  full_name: Avellaneda Sarrió, Mario
  id: DC4BA84C-56E6-11EA-AD5D-348C3DDC885E
  last_name: Avellaneda Sarrió
  orcid: 0000-0001-6406-524X
- first_name: Nikola
  full_name: Canigova, Nikola
  id: 3795523E-F248-11E8-B48F-1D18A9856A87
  last_name: Canigova
  orcid: 0000-0002-8518-5926
- first_name: Florian R
  full_name: Gärtner, Florian R
  id: 397A88EE-F248-11E8-B48F-1D18A9856A87
  last_name: Gärtner
  orcid: 0000-0001-6120-3723
- first_name: Kari
  full_name: Vaahtomeri, Kari
  id: 368EE576-F248-11E8-B48F-1D18A9856A87
  last_name: Vaahtomeri
  orcid: 0000-0001-7829-3518
- first_name: Michael
  full_name: Riedl, Michael
  id: 3BE60946-F248-11E8-B48F-1D18A9856A87
  last_name: Riedl
  orcid: 0000-0003-4844-6311
- first_name: Ingrid
  full_name: De Vries, Ingrid
  id: 4C7D837E-F248-11E8-B48F-1D18A9856A87
  last_name: De Vries
- first_name: Jack
  full_name: Merrin, Jack
  id: 4515C308-F248-11E8-B48F-1D18A9856A87
  last_name: Merrin
  orcid: 0000-0001-5145-4609
- first_name: Robert
  full_name: Hauschild, Robert
  id: 4E01D6B4-F248-11E8-B48F-1D18A9856A87
  last_name: Hauschild
  orcid: 0000-0001-9843-3522
- first_name: Yoshinori
  full_name: Fukui, Yoshinori
  last_name: Fukui
- first_name: Alba
  full_name: Juanes Garcia, Alba
  id: 40F05888-F248-11E8-B48F-1D18A9856A87
  last_name: Juanes Garcia
  orcid: 0000-0002-1009-9652
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-6620-9179
citation:
  ama: Dos Reis Rodrigues P, Avellaneda Sarrió M, Canigova N, et al. Migrating immune
    cells globally coordinate protrusive forces. <i>Nature Immunology</i>. 2025;26:1258–1266.
    doi:<a href="https://doi.org/10.1038/s41590-025-02211-w">10.1038/s41590-025-02211-w</a>
  apa: Dos Reis Rodrigues, P., Avellaneda Sarrió, M., Canigova, N., Gärtner, F. R.,
    Vaahtomeri, K., Riedl, M., … Sixt, M. K. (2025). Migrating immune cells globally
    coordinate protrusive forces. <i>Nature Immunology</i>. Springer Nature. <a href="https://doi.org/10.1038/s41590-025-02211-w">https://doi.org/10.1038/s41590-025-02211-w</a>
  chicago: Dos Reis Rodrigues, Patricia, Mario Avellaneda Sarrió, Nikola Canigova,
    Florian R Gärtner, Kari Vaahtomeri, Michael Riedl, Ingrid de Vries, et al. “Migrating
    Immune Cells Globally Coordinate Protrusive Forces.” <i>Nature Immunology</i>.
    Springer Nature, 2025. <a href="https://doi.org/10.1038/s41590-025-02211-w">https://doi.org/10.1038/s41590-025-02211-w</a>.
  ieee: P. Dos Reis Rodrigues <i>et al.</i>, “Migrating immune cells globally coordinate
    protrusive forces,” <i>Nature Immunology</i>, vol. 26. Springer Nature, pp. 1258–1266,
    2025.
  ista: Dos Reis Rodrigues P, Avellaneda Sarrió M, Canigova N, Gärtner FR, Vaahtomeri
    K, Riedl M, de Vries I, Merrin J, Hauschild R, Fukui Y, Juanes Garcia A, Sixt
    MK. 2025. Migrating immune cells globally coordinate protrusive forces. Nature
    Immunology. 26, 1258–1266.
  mla: Dos Reis Rodrigues, Patricia, et al. “Migrating Immune Cells Globally Coordinate
    Protrusive Forces.” <i>Nature Immunology</i>, vol. 26, Springer Nature, 2025,
    pp. 1258–1266, doi:<a href="https://doi.org/10.1038/s41590-025-02211-w">10.1038/s41590-025-02211-w</a>.
  short: P. Dos Reis Rodrigues, M. Avellaneda Sarrió, N. Canigova, F.R. Gärtner, K.
    Vaahtomeri, M. Riedl, I. de Vries, J. Merrin, R. Hauschild, Y. Fukui, A. Juanes
    Garcia, M.K. Sixt, Nature Immunology 26 (2025) 1258–1266.
corr_author: '1'
date_created: 2025-07-27T22:01:26Z
date_published: 2025-08-01T00:00:00Z
date_updated: 2026-04-28T13:26:50Z
day: '01'
ddc:
- '570'
department:
- _id: MiSi
- _id: NanoFab
- _id: Bio
doi: 10.1038/s41590-025-02211-w
external_id:
  isi:
  - '001529134300001'
  pmid:
  - '40664976'
file:
- access_level: open_access
  checksum: 0c725123dca7797c682609bff2c4c5ac
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  date_created: 2025-07-31T08:00:33Z
  date_updated: 2025-07-31T08:00:33Z
  file_id: '20096'
  file_name: 2025_NatureImmunology_ReisRodrigues.pdf
  file_size: 13514646
  relation: main_file
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file_date_updated: 2025-07-31T08:00:33Z
has_accepted_license: '1'
intvolume: '        26'
isi: 1
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: 1258–1266
pmid: 1
project:
- _id: bd91e723-d553-11ed-ba76-fe7eeb2185fd
  grant_number: '101071793'
  name: 'Pushing from within: Control of cell shape, integrity and motility by cytoskeletal
    pushing forces'
- _id: c092d618-5a5b-11eb-8a69-f92e1e843fc8
  grant_number: 944-2020
  name: 'Bioelectric patrolling: the role of the local membrane potential in immune
    cell migration'
publication: Nature Immunology
publication_identifier:
  eissn:
  - 1529-2916
  issn:
  - 1529-2908
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA website
    relation: press_release
    url: https://ista.ac.at/en/news/bench-pressing-cells/
  record:
  - id: '20149'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Migrating immune cells globally coordinate protrusive forces
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 26
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '19856'
abstract:
- lang: eng
  text: Unlike in crystals, it is difficult to trace emergent material properties
    of amorphous solids to their underlying structure. Nevertheless, one can tune
    features of a disordered spring network, ranging from bulk elastic constants to
    specific allosteric responses, through highly precise alterations of the structure.
    This has been understood through the notion of independent bond-level response—the
    observation that, in many cases, different springs have different effects on different
    properties. While this idea has motivated inverse design in numerous contexts,
    it has not been formalized and quantified in a general context that not just informs
    but enables and predicts inverse design. Here, we show how to quantify independent
    response by linearizing the simultaneous change in multiple emergent features,
    and introduce the much stronger notion of fully independent response. Remarkably,
    we find that the mechanical properties of disordered solids are always fully independent
    across a wide array of scenarios, regardless of the target features, tunable parameters,
    system size, dimensionality, and class of interactions. Furthermore, our formulation
    quantifies the susceptibility of features to parameter changes, which is correlated
    with the maximum linear tunability. We also demonstrate the implications for multifeature
    inverse design beyond the linear regime. These results formalize our understanding
    of a key fundamental difference between ordered and disordered solids while also
    creating a practical tool to both understand and perform inverse design.
acknowledgement: We gratefully acknowledge Edouard Hannezo for helpful comments on
  the manuscript. The work was funded by the Institute of Science and Technology Austria.
article_number: '238201'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Mengjie
  full_name: Zu, Mengjie
  id: 26dd9e7c-e86a-11eb-a854-82ac731c9ae2
  last_name: Zu
- first_name: Aayush A
  full_name: Desai, Aayush A
  id: 502cfd30-32c1-11ee-a9a4-d8dad5c6739e
  last_name: Desai
- first_name: Carl Peter
  full_name: Goodrich, Carl Peter
  id: EB352CD2-F68A-11E9-89C5-A432E6697425
  last_name: Goodrich
  orcid: 0000-0002-1307-5074
citation:
  ama: Zu M, Desai AA, Goodrich CP. Fully independent response in disordered solids.
    <i>Physical Review Letters</i>. 2025;134(23). doi:<a href="https://doi.org/10.1103/PhysRevLett.134.238201">10.1103/PhysRevLett.134.238201</a>
  apa: Zu, M., Desai, A. A., &#38; Goodrich, C. P. (2025). Fully independent response
    in disordered solids. <i>Physical Review Letters</i>. American Physical Society.
    <a href="https://doi.org/10.1103/PhysRevLett.134.238201">https://doi.org/10.1103/PhysRevLett.134.238201</a>
  chicago: Zu, Mengjie, Aayush A Desai, and Carl Peter Goodrich. “Fully Independent
    Response in Disordered Solids.” <i>Physical Review Letters</i>. American Physical
    Society, 2025. <a href="https://doi.org/10.1103/PhysRevLett.134.238201">https://doi.org/10.1103/PhysRevLett.134.238201</a>.
  ieee: M. Zu, A. A. Desai, and C. P. Goodrich, “Fully independent response in disordered
    solids,” <i>Physical Review Letters</i>, vol. 134, no. 23. American Physical Society,
    2025.
  ista: Zu M, Desai AA, Goodrich CP. 2025. Fully independent response in disordered
    solids. Physical Review Letters. 134(23), 238201.
  mla: Zu, Mengjie, et al. “Fully Independent Response in Disordered Solids.” <i>Physical
    Review Letters</i>, vol. 134, no. 23, 238201, American Physical Society, 2025,
    doi:<a href="https://doi.org/10.1103/PhysRevLett.134.238201">10.1103/PhysRevLett.134.238201</a>.
  short: M. Zu, A.A. Desai, C.P. Goodrich, Physical Review Letters 134 (2025).
corr_author: '1'
date_created: 2025-06-22T22:02:06Z
date_published: 2025-06-13T00:00:00Z
date_updated: 2026-04-28T13:28:02Z
day: '13'
ddc:
- '530'
department:
- _id: CaGo
- _id: IlCa
doi: 10.1103/PhysRevLett.134.238201
external_id:
  arxiv:
  - '2412.05031'
  isi:
  - '001509005900006'
file:
- access_level: open_access
  checksum: 040b6779c91aac62c15a9b2cc417b360
  content_type: application/pdf
  creator: dernst
  date_created: 2025-06-23T11:41:08Z
  date_updated: 2025-06-23T11:41:08Z
  file_id: '19874'
  file_name: 2025_PhysReviewLetters_Zu.pdf
  file_size: 1132625
  relation: main_file
  success: 1
file_date_updated: 2025-06-23T11:41:08Z
has_accepted_license: '1'
intvolume: '       134'
isi: 1
issue: '23'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
publication: Physical Review Letters
publication_identifier:
  eissn:
  - 1079-7114
  issn:
  - 0031-9007
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA website
    relation: press_release
    url: https://ista.ac.at/en/news/infinite-diversity-in-infinite-combinations/
scopus_import: '1'
status: public
title: Fully independent response in disordered solids
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 134
year: '2025'
...
---
OA_place: publisher
_id: '20149'
abstract:
- lang: eng
  text: "Immune responses depend on the coordinated and efficient migration of leukocytes.
    These\r\ncells, which are embedded and tightly confined within tissues, must navigate
    and traverse\r\ndiverse and complex three-dimensional environments. Leukocytes
    adapt their locomotory\r\nbehavior to the mechanical, geometrical, and biochemical
    characteristics of their\r\nsurroundings. In low-density environments, where the
    pore size of the interstitial matrix\r\nallows free passage, these cells position
    the nucleus directly behind the lamellipodium, the\r\nprotrusive actin structure
    that forms the leading front of the cell. In this configuration, they\r\nuse the
    nucleus as a gauge to identify the path of least resistance.\r\nHere, we show
    that in high-density environments, where the pore size precludes free passage\r\nof
    the cell body, leukocytes reposition the microtubule-organizing center (MTOC)
    and\r\nassociated organelles in front of the nucleus. In this configuration, they
    use actin structures\r\nprotruding orthogonally to the direction of migration
    in order to open a path for the cell body.\r\nWe identify two distinct actin populations
    that serve this purpose at different subcellular\r\nlocalizations. At the leading
    edge, local indentation of the plasma membrane leads to\r\nrecruitment of the
    Wiskott-Aldrich syndrome protein (WASp), which, via Arp2/3, results in\r\nthe
    formation of individual actin foci. At the cell body, actin polymerization is
    triggered by\r\nDOCK8, a Cdc42 exchange factor, resulting in the formation of
    a central actin pool.\r\nWe demonstrate that the central and peripheral actin
    pools are functionally communicating\r\nand that depletion of the central actin
    pool leads to increased actin accumulation at the cell\r\nfront, resulting in
    excessive extension of the leading edge."
acknowledged_ssus:
- _id: Bio
- _id: LifeSc
- _id: M-Shop
- _id: NanoFab
acknowledgement: "I would like to acknowledge the\r\nfinancial support of the European
  Research Council through the ERC-SyG grant “Pushing from\r\nwithin: Control of cell
  shape, integrity and motility by cytoskeletal pushing forces”\r\n(01071793), which
  made this research possible. "
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Patricia
  full_name: Dos Reis Rodrigues, Patricia
  id: 26E95904-5160-11E9-9C0B-C5B0DC97E90F
  last_name: Dos Reis Rodrigues
  orcid: 0000-0003-1681-508X
citation:
  ama: Dos Reis Rodrigues P. Coordination of protrusive forces in immune cell migration
    . 2025. doi:<a href="https://doi.org/10.15479/AT-ISTA-20149">10.15479/AT-ISTA-20149</a>
  apa: Dos Reis Rodrigues, P. (2025). <i>Coordination of protrusive forces in immune
    cell migration </i>. Institute of Science and Technology Austria. <a href="https://doi.org/10.15479/AT-ISTA-20149">https://doi.org/10.15479/AT-ISTA-20149</a>
  chicago: Dos Reis Rodrigues, Patricia. “Coordination of Protrusive Forces in Immune
    Cell Migration .” Institute of Science and Technology Austria, 2025. <a href="https://doi.org/10.15479/AT-ISTA-20149">https://doi.org/10.15479/AT-ISTA-20149</a>.
  ieee: P. Dos Reis Rodrigues, “Coordination of protrusive forces in immune cell migration
    ,” Institute of Science and Technology Austria, 2025.
  ista: Dos Reis Rodrigues P. 2025. Coordination of protrusive forces in immune cell
    migration . Institute of Science and Technology Austria.
  mla: Dos Reis Rodrigues, Patricia. <i>Coordination of Protrusive Forces in Immune
    Cell Migration </i>. Institute of Science and Technology Austria, 2025, doi:<a
    href="https://doi.org/10.15479/AT-ISTA-20149">10.15479/AT-ISTA-20149</a>.
  short: P. Dos Reis Rodrigues, Coordination of Protrusive Forces in Immune Cell Migration
    , Institute of Science and Technology Austria, 2025.
corr_author: '1'
date_created: 2025-08-08T09:18:02Z
date_published: 2025-08-08T00:00:00Z
date_updated: 2026-04-28T13:26:50Z
day: '08'
ddc:
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degree_awarded: PhD
department:
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- _id: MiSi
doi: 10.15479/AT-ISTA-20149
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month: '08'
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oa_version: Published Version
page: '114'
project:
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  grant_number: '101071793'
  name: 'Pushing from within: Control of cell shape, integrity and motility by cytoskeletal
    pushing forces'
publication_identifier:
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '10703'
    relation: part_of_dissertation
    status: public
  - id: '20082'
    relation: part_of_dissertation
    status: public
status: public
supervisor:
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-6620-9179
title: 'Coordination of protrusive forces in immune cell migration '
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: dissertation
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2025'
...
---
OA_place: repository
OA_type: gold
_id: '18697'
abstract:
- lang: eng
  text: The information-processing capability of the brain’s cellular network depends
    on the physical wiring pattern between neurons and their molecular and functional
    characteristics. Mapping neurons and resolving their individual synaptic connections
    can be achieved by volumetric imaging at nanoscale resolution with dense cellular
    labelling. Light microscopy is uniquely positioned to visualize specific molecules
    but dense, synapse-level circuit reconstruction by light microscopy has been out
    of reach due to limitations in resolution, contrast, and volumetric imaging capability.
    Here we developed light-microscopy based connectomics (LICONN). We integrated
    specifically engineered hydrogel embedding and expansion with comprehensive deep-learning
    based segmentation and analysis of connectivity, thus directly incorporating molecular
    information in synapse-level brain tissue reconstructions. LICONN will allow synapse-level
    brain tissue phenotyping in biological experiments in a readily adoptable manner.
acknowledged_ssus:
- _id: Bio
- _id: LifeSc
- _id: ScienComp
- _id: PreCl
- _id: M-Shop
- _id: E-Lib
article_processing_charge: No
author:
- first_name: Johann G
  full_name: Danzl, Johann G
  id: 42EFD3B6-F248-11E8-B48F-1D18A9856A87
  last_name: Danzl
  orcid: 0000-0001-8559-3973
- first_name: Julia
  full_name: Lyudchik, Julia
  id: 46E28B80-F248-11E8-B48F-1D18A9856A87
  last_name: Lyudchik
- first_name: Caroline
  full_name: Kreuzinger, Caroline
  id: 382077BA-F248-11E8-B48F-1D18A9856A87
  last_name: Kreuzinger
citation:
  ama: Danzl JG, Lyudchik J, Kreuzinger C. Light-microscopy based connectomic reconstruction
    of mammalian brain tissue. 2025. doi:<a href="https://doi.org/10.15479/AT:ISTA:18697">10.15479/AT:ISTA:18697</a>
  apa: Danzl, J. G., Lyudchik, J., &#38; Kreuzinger, C. (2025). Light-microscopy based
    connectomic reconstruction of mammalian brain tissue. Institute of Science and
    Technology Austria. <a href="https://doi.org/10.15479/AT:ISTA:18697">https://doi.org/10.15479/AT:ISTA:18697</a>
  chicago: Danzl, Johann G, Julia Lyudchik, and Caroline Kreuzinger. “Light-Microscopy
    Based Connectomic Reconstruction of Mammalian Brain Tissue.” Institute of Science
    and Technology Austria, 2025. <a href="https://doi.org/10.15479/AT:ISTA:18697">https://doi.org/10.15479/AT:ISTA:18697</a>.
  ieee: J. G. Danzl, J. Lyudchik, and C. Kreuzinger, “Light-microscopy based connectomic
    reconstruction of mammalian brain tissue.” Institute of Science and Technology
    Austria, 2025.
  ista: Danzl JG, Lyudchik J, Kreuzinger C. 2025. Light-microscopy based connectomic
    reconstruction of mammalian brain tissue, Institute of Science and Technology
    Austria, <a href="https://doi.org/10.15479/AT:ISTA:18697">10.15479/AT:ISTA:18697</a>.
  mla: Danzl, Johann G., et al. <i>Light-Microscopy Based Connectomic Reconstruction
    of Mammalian Brain Tissue</i>. Institute of Science and Technology Austria, 2025,
    doi:<a href="https://doi.org/10.15479/AT:ISTA:18697">10.15479/AT:ISTA:18697</a>.
  short: J.G. Danzl, J. Lyudchik, C. Kreuzinger, (2025).
contributor:
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  first_name: Mojtaba
  id: 3A0A06F4-F248-11E8-B48F-1D18A9856A87
  last_name: Tavakoli
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  orcid: 0000-0001-8559-3973
corr_author: '1'
date_created: 2024-12-20T09:22:20Z
date_published: 2025-03-03T00:00:00Z
date_updated: 2026-04-28T13:33:34Z
day: '03'
ddc:
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has_accepted_license: '1'
month: '03'
oa: 1
oa_version: Published Version
publisher: Institute of Science and Technology Austria
related_material:
  link:
  - description: Original datasets of large size (>10GB) and datasets in zarr/n5/ims/npz
      format are provided via this external link.
    relation: research_data
    url: https://pub.ista.ac.at/group_danzl/data/LICONN/
  record:
  - id: '19704'
    relation: used_in_publication
    status: public
status: public
title: Light-microscopy based connectomic reconstruction of mammalian brain tissue
tmp:
  image: /images/cc_by_nc_sa.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC
    BY-NC-SA 4.0)
  short: CC BY-NC-SA (4.0)
type: research_data
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '19704'
abstract:
- lang: eng
  text: The information-processing capability of the brain’s cellular network depends
    on the physical wiring pattern between neurons and their molecular and functional
    characteristics. Mapping neurons and resolving their individual synaptic connections
    can be achieved by volumetric imaging at nanoscale resolution1,2 with dense cellular
    labelling. Light microscopy is uniquely positioned to visualize specific molecules,
    but dense, synapse-level circuit reconstruction by light microscopy has been out
    of reach, owing to limitations in resolution, contrast and volumetric imaging
    capability. Here we describe light-microscopy-based connectomics (LICONN). We
    integrated specifically engineered hydrogel embedding and expansion with comprehensive
    deep-learning-based segmentation and analysis of connectivity, thereby directly
    incorporating molecular information into synapse-level reconstructions of brain
    tissue. LICONN will allow synapse-level phenotyping of brain tissue in biological
    experiments in a readily adoptable manner.
acknowledged_ssus:
- _id: Bio
- _id: LifeSc
- _id: ScienComp
- _id: PreCl
- _id: M-Shop
- _id: E-Lib
acknowledgement: 'We thank S. Dorkenwald and P. Li for critical reading of the manuscript,
  S. Loomba for discussions and E. Miguel for support with data handling. We acknowledge
  support from ISTA’s scientific service units: Imaging and Optics, Lab Support, Scientific
  Computing, the preclinical facility, the Miba Machine Shop and the library. We acknowledge
  funding from the following sources: Austrian Science Fund (FWF) grant DK W1232 (J.G.D.
  and M.R.T.); Austrian Academy of Sciences DOC fellowship 26137 (M.R.T.); Gesellschaft
  für Forschungsförderung NÖ (NFB) grant LSC18-022 (J.G.D.); the European Union’s
  Horizon 2020 research and innovation programme and Marie Skłodowska-Curie Actions
  Fellowship 665385 (J.L.); and the European Union’s Horizon 2020 research and innovation
  programme and European Research Council (ERC) grant 101044865 ‘SecretAutism’ (G.N.).Open
  access funding provided by Institute of Science and Technology (IST Austria).'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Mojtaba
  full_name: Tavakoli, Mojtaba
  id: 3A0A06F4-F248-11E8-B48F-1D18A9856A87
  last_name: Tavakoli
  orcid: 0000-0002-7667-6854
- first_name: Julia
  full_name: Lyudchik, Julia
  id: 46E28B80-F248-11E8-B48F-1D18A9856A87
  last_name: Lyudchik
- first_name: Michał
  full_name: Januszewski, Michał
  last_name: Januszewski
- first_name: Vitali
  full_name: Vistunou, Vitali
  id: 7e146587-8972-11ed-ae7b-d7a32ea86a81
  last_name: Vistunou
- first_name: Nathalie
  full_name: Agudelo Duenas, Nathalie
  id: 40E7F008-F248-11E8-B48F-1D18A9856A87
  last_name: Agudelo Duenas
- first_name: Jakob
  full_name: Vorlaufer, Jakob
  id: 937696FA-C996-11E9-8C7C-CF13E6697425
  last_name: Vorlaufer
  orcid: 0009-0000-7590-3501
- first_name: Christoph M
  full_name: Sommer, Christoph M
  id: 4DF26D8C-F248-11E8-B48F-1D18A9856A87
  last_name: Sommer
  orcid: 0000-0003-1216-9105
- first_name: Caroline
  full_name: Kreuzinger, Caroline
  id: 382077BA-F248-11E8-B48F-1D18A9856A87
  last_name: Kreuzinger
- first_name: Bárbara
  full_name: Oliveira, Bárbara
  id: 3B03AA1A-F248-11E8-B48F-1D18A9856A87
  last_name: Oliveira
- first_name: Alban
  full_name: Cenameri, Alban
  id: 9ac8f577-2357-11eb-997a-e566c5550886
  last_name: Cenameri
- first_name: Gaia
  full_name: Novarino, Gaia
  id: 3E57A680-F248-11E8-B48F-1D18A9856A87
  last_name: Novarino
  orcid: 0000-0002-7673-7178
- first_name: Viren
  full_name: Jain, Viren
  last_name: Jain
- first_name: Johann G
  full_name: Danzl, Johann G
  id: 42EFD3B6-F248-11E8-B48F-1D18A9856A87
  last_name: Danzl
  orcid: 0000-0001-8559-3973
citation:
  ama: Tavakoli M, Lyudchik J, Januszewski M, et al. Light-microscopy-based connectomic
    reconstruction of mammalian brain tissue. <i>Nature</i>. 2025;642:398-410. doi:<a
    href="https://doi.org/10.1038/s41586-025-08985-1">10.1038/s41586-025-08985-1</a>
  apa: Tavakoli, M., Lyudchik, J., Januszewski, M., Vistunou, V., Agudelo Duenas,
    N., Vorlaufer, J., … Danzl, J. G. (2025). Light-microscopy-based connectomic reconstruction
    of mammalian brain tissue. <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/s41586-025-08985-1">https://doi.org/10.1038/s41586-025-08985-1</a>
  chicago: Tavakoli, Mojtaba, Julia Lyudchik, Michał Januszewski, Vitali Vistunou,
    Nathalie Agudelo Duenas, Jakob Vorlaufer, Christoph M Sommer, et al. “Light-Microscopy-Based
    Connectomic Reconstruction of Mammalian Brain Tissue.” <i>Nature</i>. Springer
    Nature, 2025. <a href="https://doi.org/10.1038/s41586-025-08985-1">https://doi.org/10.1038/s41586-025-08985-1</a>.
  ieee: M. Tavakoli <i>et al.</i>, “Light-microscopy-based connectomic reconstruction
    of mammalian brain tissue,” <i>Nature</i>, vol. 642. Springer Nature, pp. 398–410,
    2025.
  ista: Tavakoli M, Lyudchik J, Januszewski M, Vistunou V, Agudelo Duenas N, Vorlaufer
    J, Sommer CM, Kreuzinger C, Oliveira B, Cenameri A, Novarino G, Jain V, Danzl
    JG. 2025. Light-microscopy-based connectomic reconstruction of mammalian brain
    tissue. Nature. 642, 398–410.
  mla: Tavakoli, Mojtaba, et al. “Light-Microscopy-Based Connectomic Reconstruction
    of Mammalian Brain Tissue.” <i>Nature</i>, vol. 642, Springer Nature, 2025, pp.
    398–410, doi:<a href="https://doi.org/10.1038/s41586-025-08985-1">10.1038/s41586-025-08985-1</a>.
  short: M. Tavakoli, J. Lyudchik, M. Januszewski, V. Vistunou, N. Agudelo Duenas,
    J. Vorlaufer, C.M. Sommer, C. Kreuzinger, B. Oliveira, A. Cenameri, G. Novarino,
    V. Jain, J.G. Danzl, Nature 642 (2025) 398–410.
corr_author: '1'
date_created: 2025-05-18T22:02:51Z
date_published: 2025-06-12T00:00:00Z
date_updated: 2026-04-28T13:33:34Z
day: '12'
ddc:
- '570'
department:
- _id: JoDa
- _id: GradSch
- _id: Bio
- _id: GaNo
doi: 10.1038/s41586-025-08985-1
ec_funded: 1
external_id:
  isi:
  - '001483477000001'
  pmid:
  - '40335689'
file:
- access_level: open_access
  checksum: ebc99d7108e728f46db0a009292675ef
  content_type: application/pdf
  creator: dernst
  date_created: 2025-07-03T06:55:20Z
  date_updated: 2025-07-03T06:55:20Z
  file_id: '19959'
  file_name: 2025_Nature_Tavakoli.pdf
  file_size: 133201290
  relation: main_file
  success: 1
file_date_updated: 2025-07-03T06:55:20Z
has_accepted_license: '1'
intvolume: '       642'
isi: 1
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: 398-410
pmid: 1
project:
- _id: 6285a163-2b32-11ec-9570-8e204ca2dba5
  grant_number: '26137'
  name: Studying Organelle Structure and Function at Nanoscale Resolution with Expansion
    Microscopy
- _id: 2564DBCA-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '665385'
  name: International IST Doctoral Program
- _id: 34ba8964-11ca-11ed-8bc3-e15864e7e9a6
  grant_number: '101044865'
  name: Toward an understanding of the brain interstitial system and the extracellular
    proteome in health and autism spectrum disorders
- _id: 26AA4EF2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: W1232-B24
  name: Molecular Drug Targets
publication: Nature
publication_identifier:
  eissn:
  - 1476-4687
  issn:
  - 0028-0836
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA website
    relation: press_release
    url: https://ista.ac.at/en/news/piecing-together-the-brain-puzzle/
  record:
  - id: '18677'
    relation: earlier_version
    status: public
  - id: '18697'
    relation: research_data
    status: public
scopus_import: '1'
status: public
title: Light-microscopy-based connectomic reconstruction of mammalian brain tissue
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 642
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '19602'
abstract:
- lang: eng
  text: N4-methylcytosine (4mC) is an important DNA modification in prokaryotes, but
    its relevance and even its presence in eukaryotes have been mysterious. Here we
    show that spermatogenesis in the liverwort Marchantia polymorpha involves two
    waves of extensive DNA methylation reprogramming. First, 5-methylcytosine (5mC)
    expands from transposons to the entire genome. Notably, the second wave installs
    4mC throughout genic regions, covering over 50% of CG sites in sperm. 4mC requires
    a methyltransferase (MpDN4MT1a) that is specifically expressed during late spermiogenesis.
    Deletion of MpDN4MT1a alters the sperm transcriptome, causes sperm swimming and
    fertility defects, and impairs post-fertilization development. Our results reveal
    extensive 4mC in a eukaryote, identify a family of eukaryotic methyltransferases,
    and elucidate the biological functions of 4mC in reproductive development, thereby
    expanding the repertoire of functional eukaryotic DNA modifications.
acknowledged_ssus:
- _id: Bio
- _id: ScienComp
acknowledgement: We thank Sir Richard Roberts (NEB) for the kind gift of anti-4mC
  antibodies. We are also grateful to the JIC Small Molecule Mass Spectrometry (Lionel
  Hill) and Chemistry (Martin Rejzek) platforms as well as the High Resolution Metabolomics
  Laboratory (Manfred Beckmann, Aberystwyth University) for their assistance with
  LC-MS. Additionally, we acknowledge the assistance of the JIC Bioimaging Facility
  and ISTA Imaging and Optics Facility for microscopy. Finally, we appreciate the
  High Performance Computing resources provided by the ISTA Scientific Computing Facility
  and Norwich BioScience Institute Partnership Computing Infrastructure. This work
  was funded by a Sainsbury Charitable Foundation studentship (J.W.), a UKRI-BBSRC
  Doctoral Training Partnerships studentship (BBT0087171 to J.T.), a European Research
  Council Starting Grant (“SexMeth” 804981 to J.W., S.X., and X.F.), two Biotechnology
  and Biological Sciences Research Council (BBSRC) grants (BBS0096201 and BBP0135111
  to J.Z., M.V., and X.F.), an EMBO Long Term Fellowship (Y.L.), an ISTA Bridge Fellowship
  (S.X.), and ISTA core funding (Y.Y. and X.F.).
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: James
  full_name: Walker, James
  last_name: Walker
- first_name: Jingyi
  full_name: Zhang, Jingyi
  last_name: Zhang
- first_name: Yalin
  full_name: Liu, Yalin
  last_name: Liu
- first_name: Shujuan
  full_name: Xu, Shujuan
  id: 9724dd9d-f591-11ee-bd51-e97ed0652286
  last_name: Xu
- first_name: Yiming
  full_name: Yu, Yiming
  id: 318e643b-8b61-11ed-b69e-aafa103ec8dd
  last_name: Yu
  orcid: 0000-0002-9919-7282
- first_name: Martin
  full_name: Vickers, Martin
  last_name: Vickers
- first_name: Weizhi
  full_name: Ouyang, Weizhi
  id: fec73395-8b60-11ed-b69e-927fda99c743
  last_name: Ouyang
- first_name: Judit
  full_name: Tálas, Judit
  last_name: Tálas
- first_name: Liam
  full_name: Dolan, Liam
  last_name: Dolan
- first_name: Keiji
  full_name: Nakajima, Keiji
  last_name: Nakajima
- first_name: Xiaoqi
  full_name: Feng, Xiaoqi
  id: e0164712-22ee-11ed-b12a-d80fcdf35958
  last_name: Feng
  orcid: 0000-0002-4008-1234
citation:
  ama: Walker J, Zhang J, Liu Y, et al. Extensive N4 cytosine methylation is essential
    for Marchantia sperm function. <i>Cell</i>. 2025;188(11):2890-2906.e14. doi:<a
    href="https://doi.org/10.1016/j.cell.2025.03.014">10.1016/j.cell.2025.03.014</a>
  apa: Walker, J., Zhang, J., Liu, Y., Xu, S., Yu, Y., Vickers, M., … Feng, X. (2025).
    Extensive N4 cytosine methylation is essential for Marchantia sperm function.
    <i>Cell</i>. Elsevier. <a href="https://doi.org/10.1016/j.cell.2025.03.014">https://doi.org/10.1016/j.cell.2025.03.014</a>
  chicago: Walker, James, Jingyi Zhang, Yalin Liu, Shujuan Xu, Yiming Yu, Martin Vickers,
    Weizhi Ouyang, et al. “Extensive N4 Cytosine Methylation Is Essential for Marchantia
    Sperm Function.” <i>Cell</i>. Elsevier, 2025. <a href="https://doi.org/10.1016/j.cell.2025.03.014">https://doi.org/10.1016/j.cell.2025.03.014</a>.
  ieee: J. Walker <i>et al.</i>, “Extensive N4 cytosine methylation is essential for
    Marchantia sperm function,” <i>Cell</i>, vol. 188, no. 11. Elsevier, p. 2890–2906.e14,
    2025.
  ista: Walker J, Zhang J, Liu Y, Xu S, Yu Y, Vickers M, Ouyang W, Tálas J, Dolan
    L, Nakajima K, Feng X. 2025. Extensive N4 cytosine methylation is essential for
    Marchantia sperm function. Cell. 188(11), 2890–2906.e14.
  mla: Walker, James, et al. “Extensive N4 Cytosine Methylation Is Essential for Marchantia
    Sperm Function.” <i>Cell</i>, vol. 188, no. 11, Elsevier, 2025, p. 2890–2906.e14,
    doi:<a href="https://doi.org/10.1016/j.cell.2025.03.014">10.1016/j.cell.2025.03.014</a>.
  short: J. Walker, J. Zhang, Y. Liu, S. Xu, Y. Yu, M. Vickers, W. Ouyang, J. Tálas,
    L. Dolan, K. Nakajima, X. Feng, Cell 188 (2025) 2890–2906.e14.
corr_author: '1'
date_created: 2025-04-20T22:01:28Z
date_published: 2025-05-29T00:00:00Z
date_updated: 2026-04-28T13:36:51Z
day: '29'
ddc:
- '570'
department:
- _id: XiFe
doi: 10.1016/j.cell.2025.03.014
ec_funded: 1
external_id:
  isi:
  - '001504744800006'
  pmid:
  - '40209706'
file:
- access_level: open_access
  checksum: 0dcc2feb368dfe7c4890093366b2dacb
  content_type: application/pdf
  creator: dernst
  date_created: 2025-12-29T13:40:32Z
  date_updated: 2025-12-29T13:40:32Z
  file_id: '20871'
  file_name: 2025_Cell_Walker.pdf
  file_size: 11622960
  relation: main_file
  success: 1
file_date_updated: 2025-12-29T13:40:32Z
has_accepted_license: '1'
intvolume: '       188'
isi: 1
issue: '11'
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
page: 2890-2906.e14
pmid: 1
project:
- _id: bdb51a6e-d553-11ed-ba76-c2025f3d5725
  call_identifier: H2020
  grant_number: '804981'
  name: Establishment, modulation and inheritance of sexual lineage specific DNA methylation
    in plants
publication: Cell
publication_identifier:
  eissn:
  - 1097-4172
  issn:
  - 0092-8674
publication_status: published
publisher: Elsevier
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA website
    relation: press_release
    url: https://ista.ac.at/en/news/from-bacterial-immunity-to-plant-sex/
scopus_import: '1'
status: public
title: Extensive N4 cytosine methylation is essential for Marchantia sperm function
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 188
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '19664'
abstract:
- lang: eng
  text: Persistent revivals recently observed in Rydberg atom simulators have challenged
    our understanding of thermalization and attracted much interest to the concept
    of quantum many-body scars (QMBSs). QMBSs are non-thermal highly excited eigenstates
    that coexist with typical eigenstates in the spectrum of many-body Hamiltonians,
    and have since been reported in multiple theoretical models, including the so-called
    PXP model, approximately realized by Rydberg simulators. At the same time, questions
    of how common QMBSs are and in what models they are physically realized remain
    open. In this Letter, we demonstrate that QMBSs exist in a broader family of models
    that includes and generalizes PXP to longer-range constraints and states with
    different periodicity. We show that in each model, multiple QMBS families can
    be found. Each of them relies on a different approximate algebra, leading to oscillatory
    dynamics in all cases. However, in contrast to the PXP model, their observation
    requires launching dynamics from weakly entangled initial states rather than from
    a product state. QMBSs reported here may be experimentally probed using Rydberg
    atom simulator in the regime of longer-range Rydberg blockades.
acknowledgement: The authors are grateful to Zlatko Papić, Dolev Bluvstein, Nishad
  Maskara, Marcello Dalmonte, Thomas Iadecola, and Johannes Feldmeier for insightful
  discussions. A. K., M. L., and M. S. acknowledge support by the European Research
  Council under the European Union’s Horizon 2020 research and innovation program
  (Grant Agreement No. 850899). J.-Y. D. acknowledges funding from the European Union’s
  Horizon 2020 research and innovation program under the Marie Skłodowska-Curie Grant
  Agreement No. 101034413.
article_number: '160401'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Aron
  full_name: Kerschbaumer, Aron
  id: ade85a9c-3200-11ee-973b-91c1eb240410
  last_name: Kerschbaumer
  orcid: 0009-0002-2370-8661
- first_name: Marko
  full_name: Ljubotina, Marko
  id: F75EE9BE-5C90-11EA-905D-16643DDC885E
  last_name: Ljubotina
  orcid: 0000-0003-0038-7068
- first_name: Maksym
  full_name: Serbyn, Maksym
  id: 47809E7E-F248-11E8-B48F-1D18A9856A87
  last_name: Serbyn
  orcid: 0000-0002-2399-5827
- first_name: Jean-Yves Marc
  full_name: Desaules, Jean-Yves Marc
  id: 6c292945-a610-11ed-9eec-c3be1ad62a80
  last_name: Desaules
  orcid: 0000-0002-3749-6375
citation:
  ama: Kerschbaumer A, Ljubotina M, Serbyn M, Desaules J-YM. Quantum many-body scars
    beyond the PXP model in Rydberg simulators. <i>Physical Review Letters</i>. 2025;134(16).
    doi:<a href="https://doi.org/10.1103/PhysRevLett.134.160401">10.1103/PhysRevLett.134.160401</a>
  apa: Kerschbaumer, A., Ljubotina, M., Serbyn, M., &#38; Desaules, J.-Y. M. (2025).
    Quantum many-body scars beyond the PXP model in Rydberg simulators. <i>Physical
    Review Letters</i>. American Physical Society. <a href="https://doi.org/10.1103/PhysRevLett.134.160401">https://doi.org/10.1103/PhysRevLett.134.160401</a>
  chicago: Kerschbaumer, Aron, Marko Ljubotina, Maksym Serbyn, and Jean-Yves Marc
    Desaules. “Quantum Many-Body Scars beyond the PXP Model in Rydberg Simulators.”
    <i>Physical Review Letters</i>. American Physical Society, 2025. <a href="https://doi.org/10.1103/PhysRevLett.134.160401">https://doi.org/10.1103/PhysRevLett.134.160401</a>.
  ieee: A. Kerschbaumer, M. Ljubotina, M. Serbyn, and J.-Y. M. Desaules, “Quantum
    many-body scars beyond the PXP model in Rydberg simulators,” <i>Physical Review
    Letters</i>, vol. 134, no. 16. American Physical Society, 2025.
  ista: Kerschbaumer A, Ljubotina M, Serbyn M, Desaules J-YM. 2025. Quantum many-body
    scars beyond the PXP model in Rydberg simulators. Physical Review Letters. 134(16),
    160401.
  mla: Kerschbaumer, Aron, et al. “Quantum Many-Body Scars beyond the PXP Model in
    Rydberg Simulators.” <i>Physical Review Letters</i>, vol. 134, no. 16, 160401,
    American Physical Society, 2025, doi:<a href="https://doi.org/10.1103/PhysRevLett.134.160401">10.1103/PhysRevLett.134.160401</a>.
  short: A. Kerschbaumer, M. Ljubotina, M. Serbyn, J.-Y.M. Desaules, Physical Review
    Letters 134 (2025).
date_created: 2025-05-11T22:02:38Z
date_published: 2025-04-22T00:00:00Z
date_updated: 2026-04-28T13:34:57Z
day: '22'
ddc:
- '530'
department:
- _id: MaSe
doi: 10.1103/PhysRevLett.134.160401
ec_funded: 1
external_id:
  arxiv:
  - '2410.18913'
  isi:
  - '001480669300011'
  pmid:
  - '40344113'
file:
- access_level: open_access
  checksum: b7f581291e20f152d0efc64727314ca2
  content_type: application/pdf
  creator: dernst
  date_created: 2025-05-12T07:33:38Z
  date_updated: 2025-05-12T07:33:38Z
  file_id: '19677'
  file_name: 2025_PhysReviewLetters_Kerschbaumer.pdf
  file_size: 1028993
  relation: main_file
  success: 1
file_date_updated: 2025-05-12T07:33:38Z
has_accepted_license: '1'
intvolume: '       134'
isi: 1
issue: '16'
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 23841C26-32DE-11EA-91FC-C7463DDC885E
  call_identifier: H2020
  grant_number: '850899'
  name: 'Non-Ergodic Quantum Matter: Universality, Dynamics and Control'
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: Physical Review Letters
publication_identifier:
  eissn:
  - 1079-7114
  issn:
  - 0031-9007
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA website
    relation: press_release
    url: https://ista.ac.at/en/news/a-sky-full-of-quantum-scars/
  record:
  - id: '19623'
    relation: research_data
    status: public
scopus_import: '1'
status: public
title: Quantum many-body scars beyond the PXP model in Rydberg simulators
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 134
year: '2025'
...
---
_id: '19623'
abstract:
- lang: eng
  text: "Persistent revivals recently observed in Rydberg atom simulators have challenged
    our understanding of thermalization and attracted much interest to the concept
    of quantum many-body scars (QMBSs). QMBSs are non-thermal highly excited eigenstates
    that coexist with typical eigenstates in the spectrum of many-body Hamiltonians,
    and have since been reported in multiple theoretical models, including the so-called
    PXP model, approximately realized by Rydberg simulators. At the same time, questions
    of how common QMBSs are and in what models they are physically realized remain
    open. In this Letter, we demonstrate that QMBSs exist in a broader family of models
    that includes and generalizes PXP to longer-range constraints and states with
    different periodicity. We show that in each model, multiple QMBS families can
    be found. Each of them relies on a different approximate \U0001D530\U0001D532⁡(2)
    algebra, leading to oscillatory dynamics in all cases. However, in contrast to
    the PXP model, their observation requires launching dynamics from weakly entangled
    initial states rather than from a product state. QMBSs reported here may be experimentally
    probed using Rydberg atom simulator in the regime of longer-range Rydberg blockades."
acknowledged_ssus:
- _id: ScienComp
acknowledgement: The authors are grateful to Zlatko Papić, Dolev Bluvstein, Nishad
  Maskara, Marcello Dalmonte, Thomas Iadecola, and Johannes Feldmeier for insightful
  discussions. A. K., M. L., and M. S. acknowledge support by the European Research
  Council under the European Union’s Horizon 2020 research and innovation program
  (Grant Agreement No. 850899). J.-Y. D. acknowledges funding from the European Union’s
  Horizon 2020 research and innovation program under the Marie Skłodowska-Curie Grant
  Agreement No. 101034413.
article_processing_charge: No
author:
- first_name: Jean-Yves Marc
  full_name: Desaules, Jean-Yves Marc
  id: 6c292945-a610-11ed-9eec-c3be1ad62a80
  last_name: Desaules
  orcid: 0000-0002-3749-6375
citation:
  ama: Desaules J-YM. Research Data for “Quantum Many-Body Scars beyond the PXP Model
    in Rydberg Simulators.” 2025. doi:<a href="https://doi.org/10.15479/AT:ISTA:19623">10.15479/AT:ISTA:19623</a>
  apa: Desaules, J.-Y. M. (2025). Research Data for “Quantum Many-Body Scars beyond
    the PXP Model in Rydberg Simulators.” Institute of Science and Technology Austria.
    <a href="https://doi.org/10.15479/AT:ISTA:19623">https://doi.org/10.15479/AT:ISTA:19623</a>
  chicago: Desaules, Jean-Yves Marc. “Research Data for ‘Quantum Many-Body Scars beyond
    the PXP Model in Rydberg Simulators.’” Institute of Science and Technology Austria,
    2025. <a href="https://doi.org/10.15479/AT:ISTA:19623">https://doi.org/10.15479/AT:ISTA:19623</a>.
  ieee: J.-Y. M. Desaules, “Research Data for ‘Quantum Many-Body Scars beyond the
    PXP Model in Rydberg Simulators.’” Institute of Science and Technology Austria,
    2025.
  ista: Desaules J-YM. 2025. Research Data for ‘Quantum Many-Body Scars beyond the
    PXP Model in Rydberg Simulators’, Institute of Science and Technology Austria,
    <a href="https://doi.org/10.15479/AT:ISTA:19623">10.15479/AT:ISTA:19623</a>.
  mla: Desaules, Jean-Yves Marc. <i>Research Data for “Quantum Many-Body Scars beyond
    the PXP Model in Rydberg Simulators.”</i> Institute of Science and Technology
    Austria, 2025, doi:<a href="https://doi.org/10.15479/AT:ISTA:19623">10.15479/AT:ISTA:19623</a>.
  short: J.-Y.M. Desaules, (2025).
contributor:
- contributor_type: researcher
  first_name: Aron
  id: ade85a9c-3200-11ee-973b-91c1eb240410
  last_name: Kerschbaumer
- contributor_type: researcher
  first_name: Marko
  last_name: Ljubotina
- contributor_type: researcher
  first_name: Maksym
  id: 47809E7E-F248-11E8-B48F-1D18A9856A87
  last_name: Serbyn
  orcid: 0000-0002-2399-5827
- contributor_type: researcher
  first_name: Jean-Yves Marc
  id: 6c292945-a610-11ed-9eec-c3be1ad62a80
  last_name: Desaules
  orcid: 0000-0002-3749-6375
corr_author: '1'
date_created: 2025-04-24T19:58:46Z
date_published: 2025-04-24T00:00:00Z
date_updated: 2026-04-28T13:34:56Z
day: '24'
ddc:
- '530'
department:
- _id: MaSe
doi: 10.15479/AT:ISTA:19623
ec_funded: 1
file:
- access_level: open_access
  checksum: d073314c4dc95d93feaadbff188ce4a1
  content_type: application/zip
  creator: jdesaule
  date_created: 2025-05-05T07:14:17Z
  date_updated: 2025-05-05T07:14:17Z
  file_id: '19646'
  file_name: Data+Code.zip
  file_size: 583478621
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  success: 1
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  checksum: d386a2364fb1147ef6dad30ad029c080
  content_type: text/plain
  creator: jdesaule
  date_created: 2025-05-05T07:13:46Z
  date_updated: 2025-05-05T07:13:46Z
  file_id: '19647'
  file_name: readme.txt
  file_size: 15856
  relation: main_file
  success: 1
file_date_updated: 2025-05-05T07:14:17Z
has_accepted_license: '1'
keyword:
- quantum many-body scars
- non-equilibrium physics
- Rydberg atoms
license: https://creativecommons.org/licenses/by-nc/4.0/
month: '04'
oa: 1
oa_version: None
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
- _id: 23841C26-32DE-11EA-91FC-C7463DDC885E
  call_identifier: H2020
  grant_number: '850899'
  name: 'Non-Ergodic Quantum Matter: Universality, Dynamics and Control'
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '19664'
    relation: used_in_publication
    status: public
status: public
title: Research Data for "Quantum Many-Body Scars beyond the PXP Model in Rydberg
  Simulators"
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: research_data
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '19278'
abstract:
- lang: eng
  text: 'When two insulating, neutral materials are contacted and separated, they
    exchange electrical charge1. Experiments have long suggested that this ‘contact
    electrification’ is transitive, with different materials ordering into ‘triboelectric
    series’ based on the sign of charge acquired2. At the same time, the effect is
    plagued by unpredictability, preventing consensus on the mechanism and casting
    doubt on the rhyme and reason that series imply3. Here we expose an unanticipated
    connection between the unpredictability and order in contact electrification:
    nominally identical materials initially exchange charge randomly and intransitively,
    but—over repeated experiments—order into triboelectric series. We find that this
    evolution is driven by the act of contact itself—samples with more contacts in
    their history charge negatively to ones with fewer contacts. Capturing this ‘contact
    bias’ in a minimal model, we recreate both the initial randomness and ultimate
    order in numerical simulations and use it experimentally to force the appearance
    of a triboelectric series of our choosing. With a set of surface-sensitive techniques
    to search for the underlying alterations contact creates, we only find evidence
    of nanoscale morphological changes, pointing to a mechanism strongly coupled with
    mechanics. Our results highlight the centrality of contact history in contact
    electrification and suggest that focusing on the unpredictability that has long
    plagued the effect may hold the key to understanding it.'
acknowledged_ssus:
- _id: M-Shop
- _id: NanoFab
- _id: ScienComp
- _id: EM-Fac
- _id: LifeSc
acknowledgement: This project has received financing from the European Research Council
  grant agreement no. 949120 under the European Union’s Horizon 2020 research and
  innovation programme. The Analytical Instrumentation Center of the TU Wien acknowledges
  support by the FFG project ‘ELSA’ under grant no. 884672. C.M.P. and M.O. acknowledge
  the state of Lower Austria and the European Regional Development Fund under grant
  no. WST3-F-542638/004-2021. This research was supported by the Scientific Service
  Units of the Institute of Science and Technology Austria through resources provided
  by the Miba Machine Shop, Nanofabrication Facility, Scientific Computing facility,
  Electron Microscopy Facility and Lab Support Facility. We thank J. Garcia-Suarez
  and G. Anciaux for the suggestion to look into the roughness power spectral density.
  We thank I.-M. Strugaru for help with testing the device for Young’s modulus measurements.
  Open access funding provided by Institute of Science and Technology (IST Austria).
article_number: 664-669
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Juan Carlos A
  full_name: Sobarzo Ponce, Juan Carlos A
  id: 4B807D68-AE37-11E9-AC72-31CAE5697425
  last_name: Sobarzo Ponce
- first_name: Felix
  full_name: Pertl, Felix
  id: 6313aec0-15b2-11ec-abd3-ed67d16139af
  last_name: Pertl
  orcid: 0000-0003-0463-5794
- first_name: Daniel
  full_name: Balazs, Daniel
  id: 302BADF6-85FC-11EA-9E3B-B9493DDC885E
  last_name: Balazs
  orcid: 0000-0001-7597-043X
- first_name: Tommaso
  full_name: Costanzo, Tommaso
  id: D93824F4-D9BA-11E9-BB12-F207E6697425
  last_name: Costanzo
  orcid: 0000-0001-9732-3815
- first_name: Markus
  full_name: Sauer, Markus
  last_name: Sauer
- first_name: Annette
  full_name: Foelske, Annette
  last_name: Foelske
- first_name: Markus
  full_name: Ostermann, Markus
  last_name: Ostermann
- first_name: Christian M.
  full_name: Pichler, Christian M.
  last_name: Pichler
- first_name: Yongkang
  full_name: Wang, Yongkang
  last_name: Wang
- first_name: Yuki
  full_name: Nagata, Yuki
  last_name: Nagata
- first_name: Mischa
  full_name: Bonn, Mischa
  last_name: Bonn
- first_name: Scott R
  full_name: Waitukaitis, Scott R
  id: 3A1FFC16-F248-11E8-B48F-1D18A9856A87
  last_name: Waitukaitis
  orcid: 0000-0002-2299-3176
citation:
  ama: Sobarzo Ponce JCA, Pertl F, Balazs D, et al. Spontaneous ordering of identical
    materials into a triboelectric series. <i>Nature</i>. 2025;638(8051). doi:<a href="https://doi.org/10.1038/s41586-024-08530-6">10.1038/s41586-024-08530-6</a>
  apa: Sobarzo Ponce, J. C. A., Pertl, F., Balazs, D., Costanzo, T., Sauer, M., Foelske,
    A., … Waitukaitis, S. R. (2025). Spontaneous ordering of identical materials into
    a triboelectric series. <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/s41586-024-08530-6">https://doi.org/10.1038/s41586-024-08530-6</a>
  chicago: Sobarzo Ponce, Juan Carlos A, Felix Pertl, Daniel Balazs, Tommaso Costanzo,
    Markus Sauer, Annette Foelske, Markus Ostermann, et al. “Spontaneous Ordering
    of Identical Materials into a Triboelectric Series.” <i>Nature</i>. Springer Nature,
    2025. <a href="https://doi.org/10.1038/s41586-024-08530-6">https://doi.org/10.1038/s41586-024-08530-6</a>.
  ieee: J. C. A. Sobarzo Ponce <i>et al.</i>, “Spontaneous ordering of identical materials
    into a triboelectric series,” <i>Nature</i>, vol. 638, no. 8051. Springer Nature,
    2025.
  ista: Sobarzo Ponce JCA, Pertl F, Balazs D, Costanzo T, Sauer M, Foelske A, Ostermann
    M, Pichler CM, Wang Y, Nagata Y, Bonn M, Waitukaitis SR. 2025. Spontaneous ordering
    of identical materials into a triboelectric series. Nature. 638(8051), 664–669.
  mla: Sobarzo Ponce, Juan Carlos A., et al. “Spontaneous Ordering of Identical Materials
    into a Triboelectric Series.” <i>Nature</i>, vol. 638, no. 8051, 664–669, Springer
    Nature, 2025, doi:<a href="https://doi.org/10.1038/s41586-024-08530-6">10.1038/s41586-024-08530-6</a>.
  short: J.C.A. Sobarzo Ponce, F. Pertl, D. Balazs, T. Costanzo, M. Sauer, A. Foelske,
    M. Ostermann, C.M. Pichler, Y. Wang, Y. Nagata, M. Bonn, S.R. Waitukaitis, Nature
    638 (2025).
corr_author: '1'
date_created: 2025-03-02T23:01:52Z
date_published: 2025-02-20T00:00:00Z
date_updated: 2026-04-28T13:44:56Z
day: '20'
ddc:
- '530'
department:
- _id: ScWa
- _id: LifeSc
- _id: EM-Fac
doi: 10.1038/s41586-024-08530-6
ec_funded: 1
external_id:
  isi:
  - '001428076100015'
  pmid:
  - '39972227'
file:
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  file_id: '19289'
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  file_size: 3807415
  relation: main_file
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file_date_updated: 2025-03-04T10:05:18Z
has_accepted_license: '1'
intvolume: '       638'
isi: 1
issue: '8051'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 0aa60e99-070f-11eb-9043-a6de6bdc3afa
  call_identifier: H2020
  grant_number: '949120'
  name: 'Tribocharge: a multi-scale approach to an enduring problem in physics'
publication: Nature
publication_identifier:
  eissn:
  - 1476-4687
  issn:
  - 0028-0836
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
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    relation: press_release
    url: https://ista.ac.at/en/news/an-electrifying-turn-in-an-age-old-quest/
  record:
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    status: public
scopus_import: '1'
status: public
title: Spontaneous ordering of identical materials into a triboelectric series
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 638
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '19421'
abstract:
- lang: eng
  text: The phytohormone auxin (Aux) is a principal endogenous developmental signal
    in plants. It mediates transcriptional reprogramming by a well-established canonical
    signalling mechanism. TIR1/AFB auxin receptors are F-box subunits of an ubiquitin
    ligase complex; after auxin perception, they associate with Aux/IAA transcriptional
    repressors and ubiquitinate them for degradation, thus enabling the activation
    of auxin response factor (ARF) transcription factors1,2,3. Here we revise this
    paradigm by showing that without TIR1 adenylate cyclase (AC) activity4, auxin-induced
    degradation of Aux/IAAs is not sufficient to mediate the transcriptional auxin
    response. Abolishing the TIR1 AC activity does not affect auxin-induced degradation
    of Aux/IAAs but renders TIR1 non-functional in mediating transcriptional reprogramming
    and auxin-regulated development, including shoot, root, root hair growth and lateral
    root formation. Transgenic plants show that local cAMP production in the vicinity
    of the Aux/IAA–ARF complex by unrelated AC enzymes bypasses the need for auxin
    perception and is sufficient to induce ARF-mediated transcription. These discoveries
    revise the canonical model of auxin signalling and establish TIR1/AFB-produced
    cAMP as a second messenger essential for transcriptional reprograming.
acknowledged_ssus:
- _id: LifeSc
- _id: Bio
acknowledgement: We are grateful to J. Callis and H.-Q. Yang for sharing materials
  and to M. Estelle and S. Kepinski for inspiring discussions. This research was supported
  by the Laboratory Support Facility, the Plant Facility and the Imaging and Optics
  Facility of the Institute of Science and Technology Austria. This project has received
  funding from the European Research Council (101142681 CYNIPS) and Austrian Science
  Fund (P 37051-B). L.Q. was supported by the National Natural Science Foundation
  of China (grant no. 32470327). M.Z. was supported by the Interdisciplinary Project
  Committee of the Institute of Science and Technology Austria, and Y.P. was supported
  by an EMBO Postdoctoral Fellowship (ALTF 38-2023). Open access funding provided
  by Institute of Science and Technology (IST Austria).
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Huihuang
  full_name: Chen, Huihuang
  id: 83c96512-15b2-11ec-abd3-b7eede36184f
  last_name: Chen
- first_name: Linlin
  full_name: Qi, Linlin
  id: 44B04502-A9ED-11E9-B6FC-583AE6697425
  last_name: Qi
  orcid: 0000-0001-5187-8401
- first_name: Minxia
  full_name: Zou, Minxia
  id: 5c243f41-03f3-11ec-841c-96faf48a7ef9
  last_name: Zou
- first_name: Mengting
  full_name: Lu, Mengting
  id: a8198a14-1ffe-11ee-8b67-d2bdff9d9178
  last_name: Lu
- first_name: M
  full_name: Kwiatkowski, M
  last_name: Kwiatkowski
- first_name: Yuanrong
  full_name: Pei, Yuanrong
  id: 98605edc-6ce7-11ee-95f3-cc16b866efcd
  last_name: Pei
- first_name: K
  full_name: Jaworski, K
  last_name: Jaworski
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
citation:
  ama: Chen H, Qi L, Zou M, et al. TIR1-produced cAMP as a second messenger in transcriptional
    auxin signalling. <i>Nature</i>. 2025;640:1011-1016. doi:<a href="https://doi.org/10.1038/s41586-025-08669-w">10.1038/s41586-025-08669-w</a>
  apa: Chen, H., Qi, L., Zou, M., Lu, M., Kwiatkowski, M., Pei, Y., … Friml, J. (2025).
    TIR1-produced cAMP as a second messenger in transcriptional auxin signalling.
    <i>Nature</i>. Springer Nature. <a href="https://doi.org/10.1038/s41586-025-08669-w">https://doi.org/10.1038/s41586-025-08669-w</a>
  chicago: Chen, Huihuang, Linlin Qi, Minxia Zou, Mengting Lu, M Kwiatkowski, Yuanrong
    Pei, K Jaworski, and Jiří Friml. “TIR1-Produced CAMP as a Second Messenger in
    Transcriptional Auxin Signalling.” <i>Nature</i>. Springer Nature, 2025. <a href="https://doi.org/10.1038/s41586-025-08669-w">https://doi.org/10.1038/s41586-025-08669-w</a>.
  ieee: H. Chen <i>et al.</i>, “TIR1-produced cAMP as a second messenger in transcriptional
    auxin signalling,” <i>Nature</i>, vol. 640. Springer Nature, pp. 1011–1016, 2025.
  ista: Chen H, Qi L, Zou M, Lu M, Kwiatkowski M, Pei Y, Jaworski K, Friml J. 2025.
    TIR1-produced cAMP as a second messenger in transcriptional auxin signalling.
    Nature. 640, 1011–1016.
  mla: Chen, Huihuang, et al. “TIR1-Produced CAMP as a Second Messenger in Transcriptional
    Auxin Signalling.” <i>Nature</i>, vol. 640, Springer Nature, 2025, pp. 1011–16,
    doi:<a href="https://doi.org/10.1038/s41586-025-08669-w">10.1038/s41586-025-08669-w</a>.
  short: H. Chen, L. Qi, M. Zou, M. Lu, M. Kwiatkowski, Y. Pei, K. Jaworski, J. Friml,
    Nature 640 (2025) 1011–1016.
corr_author: '1'
date_created: 2025-03-19T09:44:39Z
date_published: 2025-04-24T00:00:00Z
date_updated: 2026-04-28T13:42:45Z
day: '24'
ddc:
- '580'
department:
- _id: JiFr
doi: 10.1038/s41586-025-08669-w
external_id:
  isi:
  - '001437493900001'
  pmid:
  - '40044868'
file:
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  date_updated: 2025-08-05T12:29:35Z
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has_accepted_license: '1'
intvolume: '       640'
isi: 1
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
page: 1011-1016
pmid: 1
project:
- _id: 7bcece63-9f16-11ee-852c-ae94e099eeb6
  grant_number: P37051
  name: Guanylate cyclase activity of TIR1/AFBs auxin receptors
publication: Nature
publication_identifier:
  eissn:
  - 1476-4687
  issn:
  - 0028-0836
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA website
    relation: press_release
    url: https://ista.ac.at/en/news/updating-the-textbook/
  record:
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    relation: dissertation_contains
    status: public
status: public
title: TIR1-produced cAMP as a second messenger in transcriptional auxin signalling
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 640
year: '2025'
...
---
OA_place: publisher
_id: '20203'
abstract:
- lang: eng
  text: Tribocharging, or contact electrification, is the phenomenon in which two
    initially neutral materials exchange electric charge through contact and subsequent
    separation. While it is widely observed in everyday life and crucial to numerous
    natural processes, even the most basic aspects of tribocharging are still a mystery—what
    are the charge carriers involved and what drives their exchange? This work spans
    three separate projects that address different aspects of tribocharging. First,
    we introduce a novel strategy combining Finite Element Method (FEM) simulations
    with Kelvin Probe Force Microscopy (KPFM) to quantitatively extract surface charge
    density from surface voltage maps. Second, we present a simple theoretical model
    that allows for the existence of triboelectric cycles, under the assumption that
    multiple charge carrying species are involved. Third, we present experimental
    evidence that identical materials can spontaneously evolve into a triboelectric
    series, driven by contact history. Modeling this behavior enables the replication
    of experimental results with simulations, and even experimentally forcing the
    appearance of a pre-designed series by manipulating contact history. Together,
    the findings from these projects challenge traditional views on tribocharging,
    provide new tools for probing it, and open up new avenues of research—all with
    the hopes of bringing us closer to understanding this puzzling phenomenon.
acknowledged_ssus:
- _id: M-Shop
- _id: NanoFab
- _id: EM-Fac
- _id: LifeSc
- _id: ScienComp
acknowledgement: "The project in Chapter 2 has received funding from the European
  Research Council (ERC) under\r\nthe European Union’s Horizon 2020 research and innovation
  programme (Grant Agreement\r\nNo. 949120).\r\nThe project in Chapter 3 has received
  funding from the European Research Council (ERC) under\r\nthe European Union’s Horizon
  2020 research and innovation programme (Grant Agreement\r\nNo. 949120).\r\nThe project
  in Chapter 4 has received financing from the European Research Council grant\r\nagreement
  No. 949120 under the European Union’s Horizon 2020 research and innovation\r\nprogramme.
  The Analytical Instrumentation Center of the TU Wien acknowledges support by\r\nthe
  FFG project ‘ELSA’ under grant no. 884672. C.M.P. and M.O. acknowledge the state\r\nof
  Lower Austria and the European Regional Development Fund under grant no. WST3-F542638/004-2021.\r\n"
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Juan Carlos A
  full_name: Sobarzo Ponce, Juan Carlos A
  id: 4B807D68-AE37-11E9-AC72-31CAE5697425
  last_name: Sobarzo Ponce
citation:
  ama: 'Sobarzo Ponce JCA. Tribocharging of identical insulators : Triboelectric series,
    triboelectric cycles and surface charges. 2025. doi:<a href="https://doi.org/10.15479/AT-ISTA-20203">10.15479/AT-ISTA-20203</a>'
  apa: 'Sobarzo Ponce, J. C. A. (2025). <i>Tribocharging of identical insulators :
    Triboelectric series, triboelectric cycles and surface charges</i>. Institute
    of Science and Technology Austria. <a href="https://doi.org/10.15479/AT-ISTA-20203">https://doi.org/10.15479/AT-ISTA-20203</a>'
  chicago: 'Sobarzo Ponce, Juan Carlos A. “Tribocharging of Identical Insulators :
    Triboelectric Series, Triboelectric Cycles and Surface Charges.” Institute of
    Science and Technology Austria, 2025. <a href="https://doi.org/10.15479/AT-ISTA-20203">https://doi.org/10.15479/AT-ISTA-20203</a>.'
  ieee: 'J. C. A. Sobarzo Ponce, “Tribocharging of identical insulators : Triboelectric
    series, triboelectric cycles and surface charges,” Institute of Science and Technology
    Austria, 2025.'
  ista: 'Sobarzo Ponce JCA. 2025. Tribocharging of identical insulators : Triboelectric
    series, triboelectric cycles and surface charges. Institute of Science and Technology
    Austria.'
  mla: 'Sobarzo Ponce, Juan Carlos A. <i>Tribocharging of Identical Insulators : Triboelectric
    Series, Triboelectric Cycles and Surface Charges</i>. Institute of Science and
    Technology Austria, 2025, doi:<a href="https://doi.org/10.15479/AT-ISTA-20203">10.15479/AT-ISTA-20203</a>.'
  short: 'J.C.A. Sobarzo Ponce, Tribocharging of Identical Insulators : Triboelectric
    Series, Triboelectric Cycles and Surface Charges, Institute of Science and Technology
    Austria, 2025.'
corr_author: '1'
date_created: 2025-08-21T11:42:59Z
date_published: 2025-08-27T00:00:00Z
date_updated: 2026-04-28T13:44:56Z
day: '27'
ddc:
- '530'
degree_awarded: PhD
department:
- _id: GradSch
- _id: ScWa
doi: 10.15479/AT-ISTA-20203
ec_funded: 1
file:
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  relation: source_file
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has_accepted_license: '1'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: '96'
project:
- _id: 0aa60e99-070f-11eb-9043-a6de6bdc3afa
  call_identifier: H2020
  grant_number: '949120'
  name: 'Tribocharge: a multi-scale approach to an enduring problem in physics'
publication_identifier:
  isbn:
  - 978-3-99078-062-6
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '12109'
    relation: part_of_dissertation
    status: public
  - id: '15322'
    relation: part_of_dissertation
    status: public
  - id: '19278'
    relation: part_of_dissertation
    status: public
status: public
supervisor:
- first_name: Scott R
  full_name: Waitukaitis, Scott R
  id: 3A1FFC16-F248-11E8-B48F-1D18A9856A87
  last_name: Waitukaitis
  orcid: 0000-0002-2299-3176
title: 'Tribocharging of identical insulators : Triboelectric series, triboelectric
  cycles and surface charges'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: dissertation
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '19506'
abstract:
- lang: eng
  text: 'Hippocampal reactivation of waking neuronal assemblies in sleep is a key
    initial step of systems consolidation. Nevertheless, it is unclear whether reactivated
    assemblies are static or whether they reorganize gradually over prolonged sleep.
    We tracked reactivated CA1 assembly patterns over ∼20 h of sleep/rest periods
    and related them to assemblies seen before or after in a spatial learning paradigm
    using rats. We found that reactivated assembly patterns were gradually transformed
    and started to resemble those seen in the subsequent recall session. Periods of
    rapid eye movement (REM) sleep and non-REM (NREM) had antagonistic roles: whereas
    NREM accelerated the assembly drift, REM countered it. Moreover, only a subset
    of rate-changing pyramidal cells contributed to the drift, whereas stable-firing-rate
    cells maintained unaltered reactivation patterns. Our data suggest that prolonged
    sleep promotes the spontaneous reorganization of spatial assemblies, which can
    contribute to daily cognitive map changes or encoding new learning situations.'
acknowledgement: We thank Andrea Cumpelik, Lisa Genzel, and Freya Ólafsdóttir for
  comments on an earlier version of the manuscript. This work was supported by the
  European Research Council (281511) and Austrian Science Fund (FWF I3713).
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Lars
  full_name: Bollmann, Lars
  id: 47AD3038-F248-11E8-B48F-1D18A9856A87
  last_name: Bollmann
- first_name: Peter
  full_name: Baracskay, Peter
  id: 361CC00E-F248-11E8-B48F-1D18A9856A87
  last_name: Baracskay
- first_name: Federico
  full_name: Stella, Federico
  id: 39AF1E74-F248-11E8-B48F-1D18A9856A87
  last_name: Stella
  orcid: 0000-0001-9439-3148
- first_name: Jozsef L
  full_name: Csicsvari, Jozsef L
  id: 3FA14672-F248-11E8-B48F-1D18A9856A87
  last_name: Csicsvari
  orcid: 0000-0002-5193-4036
citation:
  ama: Bollmann L, Baracskay P, Stella F, Csicsvari JL. Sleep stages antagonistically
    modulate reactivation drift. <i>Neuron</i>. 2025;113(9):1446-1459.e6. doi:<a href="https://doi.org/10.1016/j.neuron.2025.02.025">10.1016/j.neuron.2025.02.025</a>
  apa: Bollmann, L., Baracskay, P., Stella, F., &#38; Csicsvari, J. L. (2025). Sleep
    stages antagonistically modulate reactivation drift. <i>Neuron</i>. Elsevier.
    <a href="https://doi.org/10.1016/j.neuron.2025.02.025">https://doi.org/10.1016/j.neuron.2025.02.025</a>
  chicago: Bollmann, Lars, Peter Baracskay, Federico Stella, and Jozsef L Csicsvari.
    “Sleep Stages Antagonistically Modulate Reactivation Drift.” <i>Neuron</i>. Elsevier,
    2025. <a href="https://doi.org/10.1016/j.neuron.2025.02.025">https://doi.org/10.1016/j.neuron.2025.02.025</a>.
  ieee: L. Bollmann, P. Baracskay, F. Stella, and J. L. Csicsvari, “Sleep stages antagonistically
    modulate reactivation drift,” <i>Neuron</i>, vol. 113, no. 9. Elsevier, p. 1446–1459.e6,
    2025.
  ista: Bollmann L, Baracskay P, Stella F, Csicsvari JL. 2025. Sleep stages antagonistically
    modulate reactivation drift. Neuron. 113(9), 1446–1459.e6.
  mla: Bollmann, Lars, et al. “Sleep Stages Antagonistically Modulate Reactivation
    Drift.” <i>Neuron</i>, vol. 113, no. 9, Elsevier, 2025, p. 1446–1459.e6, doi:<a
    href="https://doi.org/10.1016/j.neuron.2025.02.025">10.1016/j.neuron.2025.02.025</a>.
  short: L. Bollmann, P. Baracskay, F. Stella, J.L. Csicsvari, Neuron 113 (2025) 1446–1459.e6.
corr_author: '1'
date_created: 2025-04-06T22:01:32Z
date_published: 2025-05-07T00:00:00Z
date_updated: 2026-04-28T13:39:22Z
day: '07'
ddc:
- '570'
department:
- _id: JoCs
doi: 10.1016/j.neuron.2025.02.025
ec_funded: 1
external_id:
  isi:
  - '001510440400001'
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file:
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intvolume: '       113'
isi: 1
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language:
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month: '05'
oa: 1
oa_version: Published Version
page: 1446-1459.e6
pmid: 1
project:
- _id: 257A4776-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '281511'
  name: Memory-related information processing in neuronal circuits of the hippocampus
    and entorhinal cortex
- _id: 2654F984-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: I 3713-B27
  name: Interneuro plasticity during spatial learning
publication: Neuron
publication_identifier:
  eissn:
  - 1097-4199
  issn:
  - 0896-6273
publication_status: published
publisher: Elsevier
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA website
    relation: press_release
    url: https://ista.ac.at/en/news/how-sleep-keeps-our-memories-fresh/
scopus_import: '1'
status: public
title: Sleep stages antagonistically modulate reactivation drift
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 113
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '19499'
abstract:
- lang: eng
  text: Quantum hardware is inherently fragile and noisy. We find that the accuracy
    of traditional quantum error correction algorithms can be improved depending on
    the hardware. Given different hardware specifications, we automatically synthesize
    hardware-optimal algorithms for parity correction, qubit resetting, and GHZ (Greenberger–Horne–Zeilinger)
    state preparation. Using stochastic techniques from computer science, our method
    presents a computational tool to compute exact accuracy guarantees and synthesize
    optimal algorithms that are often different from traditional ones. We also show
    that improvements can be gained with respect to the Qiskit transpiler as we compute
    the hardware-optimal qubit mapping for the GHZ state-preparation problem.
acknowledgement: We thank the reviewers. In particular, they inspired us to analyze
  the reset and state-preparation problems, to compute optimal qubit mappings, and
  to apply our method to a quantum error correction scheme that includes both bitflip
  and phaseflip corrections. We also thank Raimundo Saona and Marek Chalupa for their
  time spent in insightful discussions. This research was partially supported by the
  European Research Council CoG 863818 (ForM-SMArt) grant.
article_number: e2419273122
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: Stefanie
  full_name: Muroya Lei, Stefanie
  id: a376de31-8972-11ed-ae7b-d0251c13c8ff
  last_name: Muroya Lei
- first_name: Krishnendu
  full_name: Chatterjee, Krishnendu
  id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
  last_name: Chatterjee
  orcid: 0000-0002-4561-241X
- first_name: Thomas A
  full_name: Henzinger, Thomas A
  id: 40876CD8-F248-11E8-B48F-1D18A9856A87
  last_name: Henzinger
  orcid: 0000-0002-2985-7724
citation:
  ama: Muroya Lei S, Chatterjee K, Henzinger TA. Hardware-optimal quantum algorithms.
    <i>Proceedings of the National Academy of Sciences</i>. 2025;122(12). doi:<a href="https://doi.org/10.1073/pnas.2419273122">10.1073/pnas.2419273122</a>
  apa: Muroya Lei, S., Chatterjee, K., &#38; Henzinger, T. A. (2025). Hardware-optimal
    quantum algorithms. <i>Proceedings of the National Academy of Sciences</i>. National
    Academy of Sciences. <a href="https://doi.org/10.1073/pnas.2419273122">https://doi.org/10.1073/pnas.2419273122</a>
  chicago: Muroya Lei, Stefanie, Krishnendu Chatterjee, and Thomas A Henzinger. “Hardware-Optimal
    Quantum Algorithms.” <i>Proceedings of the National Academy of Sciences</i>. National
    Academy of Sciences, 2025. <a href="https://doi.org/10.1073/pnas.2419273122">https://doi.org/10.1073/pnas.2419273122</a>.
  ieee: S. Muroya Lei, K. Chatterjee, and T. A. Henzinger, “Hardware-optimal quantum
    algorithms,” <i>Proceedings of the National Academy of Sciences</i>, vol. 122,
    no. 12. National Academy of Sciences, 2025.
  ista: Muroya Lei S, Chatterjee K, Henzinger TA. 2025. Hardware-optimal quantum algorithms.
    Proceedings of the National Academy of Sciences. 122(12), e2419273122.
  mla: Muroya Lei, Stefanie, et al. “Hardware-Optimal Quantum Algorithms.” <i>Proceedings
    of the National Academy of Sciences</i>, vol. 122, no. 12, e2419273122, National
    Academy of Sciences, 2025, doi:<a href="https://doi.org/10.1073/pnas.2419273122">10.1073/pnas.2419273122</a>.
  short: S. Muroya Lei, K. Chatterjee, T.A. Henzinger, Proceedings of the National
    Academy of Sciences 122 (2025).
corr_author: '1'
date_created: 2025-04-06T22:01:32Z
date_published: 2025-03-25T00:00:00Z
date_updated: 2026-04-28T13:41:14Z
day: '25'
ddc:
- '000'
department:
- _id: KrCh
- _id: ToHe
doi: 10.1073/pnas.2419273122
ec_funded: 1
external_id:
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  - '001459435600001'
  pmid:
  - '40106357'
file:
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  file_size: 6805668
  relation: main_file
  success: 1
file_date_updated: 2025-04-07T11:42:22Z
has_accepted_license: '1'
intvolume: '       122'
isi: 1
issue: '12'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 0599E47C-7A3F-11EA-A408-12923DDC885E
  call_identifier: H2020
  grant_number: '863818'
  name: 'Formal Methods for Stochastic Models: Algorithms and Applications'
publication: Proceedings of the National Academy of Sciences
publication_identifier:
  eissn:
  - 1091-6490
  issn:
  - 0027-8424
publication_status: published
publisher: National Academy of Sciences
quality_controlled: '1'
related_material:
  link:
  - relation: software
    url: https://github.com/smml1996/algorithm_synthesis
  - description: News on ISTA website
    relation: press_release
    url: https://ista.ac.at/en/news/hardware-optimal-quantum-algorithms/
scopus_import: '1'
status: public
title: Hardware-optimal quantum algorithms
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 122
year: '2025'
...
---
OA_type: closed access
_id: '19364'
abstract:
- lang: eng
  text: Thermoelectric coolers (TECs) are pivotal in modern heat management but face
    limitations in efficiency and manufacturing scalability. We address these challenges
    by using an extrusion-based 3D printing technique to fabricate high-performance
    thermoelectric materials. Our ink formulations ensure the integrity of the 3D-printed
    structure and effective particle bonding during sintering, achieving record-high
    figure of merit (zT) values of 1.42 for p-type bismuth antimony telluride [(Bi,Sb)2Te3]
    and 1.3 for n-type silver selenide (Ag2Se) materials at room temperature. The
    resulting TEC demonstrates a cooling temperature gradient of 50°C in air. Moreover,
    this scalable and cost-effective method circumvents energy-intensive and time-consuming
    steps, such as ingot preparation and subsequently machining processes, offering
    a transformative solution for thermoelectric device production and heralding a
    new era of efficient and sustainable thermoelectric technologies.
acknowledged_ssus:
- _id: EM-Fac
- _id: LifeSc
- _id: M-Shop
- _id: NanoFab
acknowledgement: This work was supported by the Scientific Service Units (SSU) of
  ISTA through resources provided by the Electron Microscopy Facility (EMF), the Lab
  Support Facility (LSF), the Communication & Events facility, the Miba Machine Shop,
  and the Nanofabrication Facility (NNF). The Mechanical Response of Materials (MRM)
  Service Unit of the Technical University of Wien is acknowledged for Mechanical
  tests. X. L. Yan and S. Bühler-Paschen (Institute of Solid-State Physics, Technical
  University of Wien) are acknowledged for granting us access to their equipment,
  which allowed us to perform independent corroborative measurements. M. Qin is acknowledged
  for help with Au deposition and wire bonding for samples used for PPMS measurements.
  The lab of B. Hof and Z. Lu is acknowledged for help with rheological properties
  measurements. The members of the Ibáñez research group, especially N. Jakhar, C.
  Fiedler, and T. Kleinhanns, are acknowledged for their feedback on the manuscript
  and fruitful discussions. This work was financially supported by ISTA and the Werner
  Siemens Foundation.
article_processing_charge: No
article_type: original
author:
- first_name: Shengduo
  full_name: Xu, Shengduo
  id: 12ab8624-4c8a-11ec-9e11-e1ac2438f22f
  last_name: Xu
- first_name: Sharona
  full_name: Horta, Sharona
  id: 03a7e858-01b1-11ec-8b71-99ae6c4a05bc
  last_name: Horta
- first_name: Abayomi Q
  full_name: Lawal, Abayomi Q
  id: 5bdaf946-5355-11ee-ae5a-8061700bd605
  last_name: Lawal
- first_name: Krishnendu
  full_name: Maji, Krishnendu
  id: 76bc9e9f-ba0b-11ee-8184-90edabd17a58
  last_name: Maji
- first_name: Magali
  full_name: Lorion, Magali
  id: bc07ac4d-142e-11eb-a9d5-d72db792859d
  last_name: Lorion
- first_name: Maria
  full_name: Ibáñez, Maria
  id: 43C61214-F248-11E8-B48F-1D18A9856A87
  last_name: Ibáñez
  orcid: 0000-0001-5013-2843
citation:
  ama: Xu S, Horta S, Lawal AQ, Maji K, Lorion M, Ibáñez M. Interfacial bonding enhances
    thermoelectric cooling in 3D-printed materials. <i>Science</i>. 2025;387(6736):845-850.
    doi:<a href="https://doi.org/10.1126/science.ads0426">10.1126/science.ads0426</a>
  apa: Xu, S., Horta, S., Lawal, A. Q., Maji, K., Lorion, M., &#38; Ibáñez, M. (2025).
    Interfacial bonding enhances thermoelectric cooling in 3D-printed materials. <i>Science</i>.
    AAAS. <a href="https://doi.org/10.1126/science.ads0426">https://doi.org/10.1126/science.ads0426</a>
  chicago: Xu, Shengduo, Sharona Horta, Abayomi Q Lawal, Krishnendu Maji, Magali Lorion,
    and Maria Ibáñez. “Interfacial Bonding Enhances Thermoelectric Cooling in 3D-Printed
    Materials.” <i>Science</i>. AAAS, 2025. <a href="https://doi.org/10.1126/science.ads0426">https://doi.org/10.1126/science.ads0426</a>.
  ieee: S. Xu, S. Horta, A. Q. Lawal, K. Maji, M. Lorion, and M. Ibáñez, “Interfacial
    bonding enhances thermoelectric cooling in 3D-printed materials,” <i>Science</i>,
    vol. 387, no. 6736. AAAS, pp. 845–850, 2025.
  ista: Xu S, Horta S, Lawal AQ, Maji K, Lorion M, Ibáñez M. 2025. Interfacial bonding
    enhances thermoelectric cooling in 3D-printed materials. Science. 387(6736), 845–850.
  mla: Xu, Shengduo, et al. “Interfacial Bonding Enhances Thermoelectric Cooling in
    3D-Printed Materials.” <i>Science</i>, vol. 387, no. 6736, AAAS, 2025, pp. 845–50,
    doi:<a href="https://doi.org/10.1126/science.ads0426">10.1126/science.ads0426</a>.
  short: S. Xu, S. Horta, A.Q. Lawal, K. Maji, M. Lorion, M. Ibáñez, Science 387 (2025)
    845–850.
corr_author: '1'
date_created: 2025-03-09T23:01:26Z
date_published: 2025-02-20T00:00:00Z
date_updated: 2026-04-28T13:43:53Z
day: '20'
department:
- _id: MaIb
doi: 10.1126/science.ads0426
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  - '39977506'
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isi: 1
issue: '6736'
language:
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month: '02'
oa_version: None
page: 845-850
pmid: 1
project:
- _id: 9B8F7476-BA93-11EA-9121-9846C619BF3A
  name: 'HighTE: The Werner Siemens Laboratory for the High Throughput Discovery of
    Semiconductors for Waste Heat Recovery'
publication: Science
publication_identifier:
  eissn:
  - 1095-9203
publication_status: published
publisher: AAAS
quality_controlled: '1'
related_material:
  link:
  - description: News on ISTA website
    relation: press_release
    url: https://ista.ac.at/en/news/cooling-materials-out-of-the-3d-printer/
scopus_import: '1'
status: public
title: Interfacial bonding enhances thermoelectric cooling in 3D-printed materials
type: journal_article
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
volume: 387
year: '2025'
...
---
OA_place: publisher
_id: '19478'
acknowledged_ssus:
- _id: Bio
- _id: LifeSc
acknowledgement: "This project was funded by the European Research Council Advanced
  Grant (ETAP-742985),\r\nEuropean Research Council (ERC; 101142681 CYNIPS), Austrian
  Science Fund (FWF; P\r\n37051-B)."
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Huihuang
  full_name: Chen, Huihuang
  id: 83c96512-15b2-11ec-abd3-b7eede36184f
  last_name: Chen
citation:
  ama: Chen H. The cAMP second messenger in auxin signalling. 2025. doi:<a href="https://doi.org/10.15479/AT-ISTA-19478">10.15479/AT-ISTA-19478</a>
  apa: Chen, H. (2025). <i>The cAMP second messenger in auxin signalling</i>. Institute
    of Science and Technology Austria. <a href="https://doi.org/10.15479/AT-ISTA-19478">https://doi.org/10.15479/AT-ISTA-19478</a>
  chicago: Chen, Huihuang. “The CAMP Second Messenger in Auxin Signalling.” Institute
    of Science and Technology Austria, 2025. <a href="https://doi.org/10.15479/AT-ISTA-19478">https://doi.org/10.15479/AT-ISTA-19478</a>.
  ieee: H. Chen, “The cAMP second messenger in auxin signalling,” Institute of Science
    and Technology Austria, 2025.
  ista: Chen H. 2025. The cAMP second messenger in auxin signalling. Institute of
    Science and Technology Austria.
  mla: Chen, Huihuang. <i>The CAMP Second Messenger in Auxin Signalling</i>. Institute
    of Science and Technology Austria, 2025, doi:<a href="https://doi.org/10.15479/AT-ISTA-19478">10.15479/AT-ISTA-19478</a>.
  short: H. Chen, The CAMP Second Messenger in Auxin Signalling, Institute of Science
    and Technology Austria, 2025.
corr_author: '1'
date_created: 2025-04-04T07:48:24Z
date_published: 2025-04-04T00:00:00Z
date_updated: 2026-04-28T13:42:45Z
day: '04'
ddc:
- '580'
degree_awarded: PhD
department:
- _id: GradSch
- _id: JiFr
doi: 10.15479/AT-ISTA-19478
ec_funded: 1
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has_accepted_license: '1'
language:
- iso: eng
month: '04'
oa_version: Published Version
page: '118'
project:
- _id: 261099A6-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '742985'
  name: Tracing Evolution of Auxin Transport and Polarity in Plants
- _id: 7bcece63-9f16-11ee-852c-ae94e099eeb6
  grant_number: P37051
  name: Guanylate cyclase activity of TIR1/AFBs auxin receptors
- _id: 8f347782-16d5-11f0-9cad-8c19706ee739
  grant_number: '101142681'
  name: Cyclic nucleotides as second messengers in plants
publication_identifier:
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
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status: public
supervisor:
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
title: The cAMP second messenger in auxin signalling
type: dissertation
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '21706'
abstract:
- lang: eng
  text: "Consider a quadratic polynomial Q(ξ1, . . . , ξn) of independent Rademacher
    random variables ξ1, . . . , ξn. To what extent can Q(ξ1, . . . , ξn) concentrate
    on a single value? This quadratic version of the classical Littlewood–Offord problem
    was popularised by Costello, Tao and Vu in their study of symmetric random matrices.
    In this paper, we obtain an essentially optimal bound for this problem, as conjectured
    by Nguyen and Vu. Specifically, if Q(ξ1, . . . , ξn) ‘robustly depends on at least
    m of the ξi’ in the sense that there is no way to pin down the value of Q(ξ1,
    . . . , ξn) by fixing values for fewer than m of the variables ξi, then we have
    Pr[Q(ξ1, . . . , ξn) = 0] ≤ O(1/√m). This also implies a similar result in the
    case where ξ1, . . . , ξn have arbitrary distributions. Our proof combines a number
    of ideas that may be of independent interest, including an inductive decoupling
    scheme that reduces quadratic anticoncentration problems\r\nto high-dimensional
    linear anticoncentration problems. Also, one application of our main result is
    the resolution of a conjecture of Alon, Hefetz, Krivelevich and Tyomkyn related
    to graph inducibility. "
acknowledgement: We would like to thank the anonymous referee for a number of helpful
  comments and suggestions. Matthew Kwan was supported by ERC Starting Grant “RANDSTRUCT”
  No. 101076777. Lisa Sauermann was supported in part by NSF Award DMS-2100157 and
  a Sloan Research Fellowship, and in part by the DFG Heisenberg Program.
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Matthew Alan
  full_name: Kwan, Matthew Alan
  id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3
  last_name: Kwan
  orcid: 0000-0002-4003-7567
- first_name: Lisa
  full_name: Sauermann, Lisa
  last_name: Sauermann
citation:
  ama: Kwan MA, Sauermann L. Resolution of the quadratic Littlewood–Offord problem.
    <i>Compositio Mathematica</i>. 2025;161(12):3089-3139. doi:<a href="https://doi.org/10.1112/S0010437X25102789">10.1112/S0010437X25102789</a>
  apa: Kwan, M. A., &#38; Sauermann, L. (2025). Resolution of the quadratic Littlewood–Offord
    problem. <i>Compositio Mathematica</i>. Cambridge University Press. <a href="https://doi.org/10.1112/S0010437X25102789">https://doi.org/10.1112/S0010437X25102789</a>
  chicago: Kwan, Matthew Alan, and Lisa Sauermann. “Resolution of the Quadratic Littlewood–Offord
    Problem.” <i>Compositio Mathematica</i>. Cambridge University Press, 2025. <a
    href="https://doi.org/10.1112/S0010437X25102789">https://doi.org/10.1112/S0010437X25102789</a>.
  ieee: M. A. Kwan and L. Sauermann, “Resolution of the quadratic Littlewood–Offord
    problem,” <i>Compositio Mathematica</i>, vol. 161, no. 12. Cambridge University
    Press, pp. 3089–3139, 2025.
  ista: Kwan MA, Sauermann L. 2025. Resolution of the quadratic Littlewood–Offord
    problem. Compositio Mathematica. 161(12), 3089–3139.
  mla: Kwan, Matthew Alan, and Lisa Sauermann. “Resolution of the Quadratic Littlewood–Offord
    Problem.” <i>Compositio Mathematica</i>, vol. 161, no. 12, Cambridge University
    Press, 2025, pp. 3089–139, doi:<a href="https://doi.org/10.1112/S0010437X25102789">10.1112/S0010437X25102789</a>.
  short: M.A. Kwan, L. Sauermann, Compositio Mathematica 161 (2025) 3089–3139.
corr_author: '1'
date_created: 2026-04-12T22:01:48Z
date_published: 2025-12-01T00:00:00Z
date_updated: 2026-05-04T09:42:57Z
day: '01'
ddc:
- '510'
department:
- _id: MaKw
doi: 10.1112/S0010437X25102789
external_id:
  arxiv:
  - '2312.13826'
file:
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  file_size: 858727
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has_accepted_license: '1'
intvolume: '       161'
issue: '12'
language:
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month: '12'
oa: 1
oa_version: Published Version
page: 3089-3139
project:
- _id: bd95085b-d553-11ed-ba76-e55d3349be45
  grant_number: '101076777'
  name: Randomness and structure in combinatorics
publication: Compositio Mathematica
publication_identifier:
  eissn:
  - 1570-5846
  issn:
  - 0010-437X
publication_status: published
publisher: Cambridge University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Resolution of the quadratic Littlewood–Offord problem
tmp:
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  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
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volume: 161
year: '2025'
...
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abstract:
- lang: eng
  text: "Complex 3D shapes can be created by morphing flat 2D configurations. Such
    deformations\r\neither preserve the intrinsic material geometry (e.g., folding
    paper) or modify it through\r\nlocalized contraction. Once transformed, the 3D
    shape can be further controlled to achieve a\r\ntarget functionality. A key challenge
    is to take the material specifications and the actuation\r\nprocess as input to
    automatically design the target 3D shape and its functionality. This thesis\r\npresents
    two novel computational pipelines for the design and control of shape-morphing\r\nstructures
    used to create functional prototypes.\r\nThe first pipeline borrows from the art
    of origami to fold paper into intricate shapes and\r\napplies this principle to
    make 3D lighting displays. We introduce, PCBend a computational\r\ndesign approach
    that covers a surface with individually addressable RGB LEDs, effectively\r\nforming
    a low-resolution surface by folding rigid printed circuit boards (PCBs). We optimize\r\ncut
    patterns on PCBs to act as hinges and co-design LED placement, circuit routing,
    and\r\nfabrication constraints to produce PCB blueprints. The PCBs are fabricated
    using automated\r\nstandard manufacturing services with LEDs embedded on them.
    Finally, the fabricated PCBs\r\nare cut along the contour and folded onto a 3D-printed
    support. The 3D lighting display is\r\nthen controlled to display complex surface
    light patterns.\r\nCreating 3D shapes through folding is only possible if their
    planar configuration, called ”unfolding” exists without any distortion or overlap.
    Existing methods often permit distortion\r\nor require multiple patches, which
    are unsuitable for fabrication pipelines that rely on folding\r\nnon-stretchable
    materials. We reinforce such fabrication pipelines by providing a geometric\r\nrelaxation
    to the problem, where the input shape is modified to admit overlap-free unfolding.\r\nThe
    second fabrication pipeline extends shape morphing to soft robotics by emulating
    nature’s\r\nblueprint of distributed actuation. Inspired by vertebrates, we build
    musculoskeletal robots\r\nusing modular active actuators, employing Liquid Crystal
    Elastomers (LCEs) as shrinkable\r\nartificial muscles integrated with 3D-printed
    bones. The chemical composition of LCEs is\r\naltered to enable untethered actuation
    through infrared radiation, allowing active control of\r\nindividual muscles and
    their corresponding bones. The combined motion of individual bones\r\ndefines
    the robot’s overall shape and functionality. Our proposed system significantly
    expands\r\nboth the design and control spaces of soft robots, which we harness
    using our computational\r\ndesign tools. We build several physical robots that
    exhibit complex shape morphing and varied\r\nterrain navigation, showcasing the
    versatility of our pipeline.\r\nThis thesis explores applications ranging from
    intricate light patterns displayed on 3D shapes\r\nformed by folding rigid PCBs
    to untethered robots that use contractile muscles to exhibit\r\nshape morphing
    and locomotion. Through these examples, the thesis highlights how computational
    design and distributed actuation, integrated with novel materials, can transform\r\npassive
    structures into functional prototypes."
acknowledgement: "Financial support was provided by the European Research Council
  (ERC) under grant agreement No 715767 - MATERIALIZABLE: Intelligent fabrication-oriented
  Computational Design\r\nand Modeling that I gratefully acknowledge.\r\n"
alternative_title:
- ISTA Thesis
article_processing_charge: No
author:
- first_name: Manas
  full_name: Bhargava, Manas
  id: FF8FA64C-AA6A-11E9-99AD-50D4E5697425
  last_name: Bhargava
  orcid: 0009-0007-6138-6890
citation:
  ama: 'Bhargava M. Design and control of deformable structures : From PCB lighting
    displays to elastomer robots. 2025. doi:<a href="https://doi.org/10.15479/AT-ISTA-20276">10.15479/AT-ISTA-20276</a>'
  apa: 'Bhargava, M. (2025). <i>Design and control of deformable structures : From
    PCB lighting displays to elastomer robots</i>. Institute of Science and Technology
    Austria. <a href="https://doi.org/10.15479/AT-ISTA-20276">https://doi.org/10.15479/AT-ISTA-20276</a>'
  chicago: 'Bhargava, Manas. “Design and Control of Deformable Structures : From PCB
    Lighting Displays to Elastomer Robots.” Institute of Science and Technology Austria,
    2025. <a href="https://doi.org/10.15479/AT-ISTA-20276">https://doi.org/10.15479/AT-ISTA-20276</a>.'
  ieee: 'M. Bhargava, “Design and control of deformable structures : From PCB lighting
    displays to elastomer robots,” Institute of Science and Technology Austria, 2025.'
  ista: 'Bhargava M. 2025. Design and control of deformable structures : From PCB
    lighting displays to elastomer robots. Institute of Science and Technology Austria.'
  mla: 'Bhargava, Manas. <i>Design and Control of Deformable Structures : From PCB
    Lighting Displays to Elastomer Robots</i>. Institute of Science and Technology
    Austria, 2025, doi:<a href="https://doi.org/10.15479/AT-ISTA-20276">10.15479/AT-ISTA-20276</a>.'
  short: 'M. Bhargava, Design and Control of Deformable Structures : From PCB Lighting
    Displays to Elastomer Robots, Institute of Science and Technology Austria, 2025.'
corr_author: '1'
date_created: 2025-09-02T14:48:39Z
date_published: 2025-09-02T00:00:00Z
date_updated: 2026-05-04T12:41:53Z
day: '02'
ddc:
- '000'
degree_awarded: PhD
department:
- _id: GradSch
- _id: BeBi
doi: 10.15479/AT-ISTA-20276
ec_funded: 1
file:
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  content_type: application/pdf
  creator: mbhargav
  date_created: 2025-09-03T10:40:52Z
  date_updated: 2025-09-03T10:40:52Z
  file_id: '20284'
  file_name: 2025-Bhargava-Manas-Thesis.pdf
  file_size: 161436245
  relation: main_file
  success: 1
- access_level: closed
  checksum: 66878fafbc0074f88ddd18f24a9fc647
  content_type: application/x-zip-compressed
  creator: mbhargav
  date_created: 2025-09-03T13:18:05Z
  date_updated: 2025-09-04T09:22:29Z
  file_id: '20285'
  file_name: manas_phd_thesis_source_files.zip
  file_size: 198831315
  relation: source_file
file_date_updated: 2025-09-04T09:22:29Z
has_accepted_license: '1'
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
page: '96'
project:
- _id: 24F9549A-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '715767'
  name: 'MATERIALIZABLE: Intelligent fabrication-oriented Computational Design and
    Modeling'
publication_identifier:
  isbn:
  - 978-3-99078-065-7
  issn:
  - 2663-337X
publication_status: published
publisher: Institute of Science and Technology Austria
related_material:
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    relation: part_of_dissertation
    status: public
  - id: '18565'
    relation: part_of_dissertation
    status: public
  - id: '20286'
    relation: part_of_dissertation
    status: public
status: public
supervisor:
- first_name: Bernd
  full_name: Bickel, Bernd
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
title: 'Design and control of deformable structures : From PCB lighting displays to
  elastomer robots'
tmp:
  image: /images/cc_by_nc.png
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type: dissertation
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2025'
...
---
OA_place: publisher
OA_type: hybrid
_id: '18565'
abstract:
- lang: eng
  text: 'We present a computational approach for unfolding 3D shapes isometrically
    into the plane as a single patch without overlapping triangles. This is a hard,
    sometimes impossible, problem, which existing methods are forced to soften by
    allowing for map distortions or multiple patches. Instead, we propose a geometric
    relaxation of the problem: We modify the input shape until it admits an overlap‐free
    unfolding. We achieve this by locally displacing vertices and collapsing edges,
    guided by the unfolding process. We validate our algorithm quantitatively and
    qualitatively on a large dataset of complex shapes and show its proficiency by
    fabricating real shapes from paper.'
acknowledgement: Researchers from INRIA received support from the DORNELL Inria Challenge.
  Silvia Sellán acknowledges support from NSERC Vanier Doctoral Scholarship and an
  MIT SoE Postdoctoral Fellowship for Engineering Excellence.
article_number: e15269
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Manas
  full_name: Bhargava, Manas
  id: FF8FA64C-AA6A-11E9-99AD-50D4E5697425
  last_name: Bhargava
  orcid: 0009-0007-6138-6890
- first_name: Camille
  full_name: Schreck, Camille
  id: 2B14B676-F248-11E8-B48F-1D18A9856A87
  last_name: Schreck
- first_name: M.
  full_name: Freire, M.
  last_name: Freire
- first_name: P. A.
  full_name: Hugron, P. A.
  last_name: Hugron
- first_name: S.
  full_name: Lefebvre, S.
  last_name: Lefebvre
- first_name: S.
  full_name: Sellán, S.
  last_name: Sellán
- first_name: Bernd
  full_name: Bickel, Bernd
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
citation:
  ama: Bhargava M, Schreck C, Freire M, et al. Mesh simplification for unfolding.
    <i>Computer Graphics Forum</i>. 2025;44(1). doi:<a href="https://doi.org/10.1111/cgf.15269">10.1111/cgf.15269</a>
  apa: Bhargava, M., Schreck, C., Freire, M., Hugron, P. A., Lefebvre, S., Sellán,
    S., &#38; Bickel, B. (2025). Mesh simplification for unfolding. <i>Computer Graphics
    Forum</i>. Wiley. <a href="https://doi.org/10.1111/cgf.15269">https://doi.org/10.1111/cgf.15269</a>
  chicago: Bhargava, Manas, Camille Schreck, M. Freire, P. A. Hugron, S. Lefebvre,
    S. Sellán, and Bernd Bickel. “Mesh Simplification for Unfolding.” <i>Computer
    Graphics Forum</i>. Wiley, 2025. <a href="https://doi.org/10.1111/cgf.15269">https://doi.org/10.1111/cgf.15269</a>.
  ieee: M. Bhargava <i>et al.</i>, “Mesh simplification for unfolding,” <i>Computer
    Graphics Forum</i>, vol. 44, no. 1. Wiley, 2025.
  ista: Bhargava M, Schreck C, Freire M, Hugron PA, Lefebvre S, Sellán S, Bickel B.
    2025. Mesh simplification for unfolding. Computer Graphics Forum. 44(1), e15269.
  mla: Bhargava, Manas, et al. “Mesh Simplification for Unfolding.” <i>Computer Graphics
    Forum</i>, vol. 44, no. 1, e15269, Wiley, 2025, doi:<a href="https://doi.org/10.1111/cgf.15269">10.1111/cgf.15269</a>.
  short: M. Bhargava, C. Schreck, M. Freire, P.A. Hugron, S. Lefebvre, S. Sellán,
    B. Bickel, Computer Graphics Forum 44 (2025).
corr_author: '1'
date_created: 2024-11-19T09:14:32Z
date_published: 2025-02-01T00:00:00Z
date_updated: 2026-05-04T12:41:52Z
day: '01'
ddc:
- '006'
department:
- _id: GradSch
- _id: BeBi
doi: 10.1111/cgf.15269
external_id:
  arxiv:
  - '2408.06944'
  isi:
  - '001357046100001'
file:
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  date_updated: 2024-11-19T09:23:20Z
  file_id: '18567'
  file_name: Mesh_Simplification_For_Unfolding_cgf_submission_supplemental_video.mp4
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  success: 1
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  creator: dernst
  date_created: 2025-04-16T09:06:45Z
  date_updated: 2025-04-16T09:06:45Z
  file_id: '19576'
  file_name: 2025_CompGraphicsForum_Bhargava.pdf
  file_size: 5188265
  relation: main_file
  success: 1
file_date_updated: 2025-04-16T09:06:45Z
has_accepted_license: '1'
intvolume: '        44'
isi: 1
issue: '1'
keyword:
- fabrication
- single patch unfolding
- mesh simplification
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
publication: Computer Graphics Forum
publication_identifier:
  eissn:
  - 1467-8659
  issn:
  - 0167-7055
publication_status: published
publisher: Wiley
quality_controlled: '1'
related_material:
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  - id: '20276'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: Mesh simplification for unfolding
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 44
year: '2025'
...
---
OA_place: repository
_id: '20286'
abstract:
- lang: eng
  text: "Natural organisms utilize distributed actuation through their musculoskeletal\r\nsystems
    to adapt their gait for traversing diverse terrains or to morph their\r\nbodies
    for varied tasks. A longstanding challenge in robotics is to emulate\r\nthis capability
    of natural organisms, which has motivated the development of\r\nnumerous soft
    robotic systems. However, such systems are generally optimized\r\nfor a single
    functionality, lack the ability to change form or function on\r\ndemand, or remain
    tethered to bulky control systems. To address these\r\nlimitations, we present
    a framework for designing and controlling robots that\r\nutilize distributed actuation.
    We propose a novel building block that\r\nintegrates 3D-printed bones with liquid
    crystal elastomer (LCE) muscles as\r\nlightweight actuators, enabling the modular
    assembly of musculoskeletal robots.\r\nWe developed LCE rods that contract in
    response to infrared radiation, thereby\r\nproviding localized, untethered control
    over the distributed skeletal network\r\nand producing global deformations of
    the robot. To fully capitalize on the\r\nextensive design space, we introduce
    two computational tools: one for\r\noptimizing the robot's skeletal graph to achieve
    multiple target deformations,\r\nand another for co-optimizing skeletal designs
    and control gaits to realize\r\ndesired locomotion. We validate our framework
    by constructing several robots\r\nthat demonstrate complex shape morphing, diverse
    control schemes, and\r\nenvironmental adaptability. Our system integrates advances
    in modular material\r\nbuilding, untethered and distributed control, and computational
    design to\r\nintroduce a new generation of robots that brings us closer to the
    capabilities\r\nof living organisms."
acknowledgement: "The authors express gratitude to Magali Lorion for assisting in
  the initial fabrication of LCEs,\r\nPengbin Tang for providing the code for simulating
  discrete elastic rods, the Imaging and\r\nOptics Facility at ISTA for assisting
  with the spectrometry measurements, and the MIBA\r\nmachine shop at ISTA for their
  support in manufacturing various devices.\r\nFunding: This project was supported
  by the European Research Council (ERC) under\r\nthe European Union’s Horizon 2020
  research and innovation program (Grant Agreement No.\r\n715767 -– MATERIALIZABLE)."
article_processing_charge: No
arxiv: 1
author:
- first_name: Manas
  full_name: Bhargava, Manas
  id: FF8FA64C-AA6A-11E9-99AD-50D4E5697425
  last_name: Bhargava
  orcid: 0009-0007-6138-6890
- first_name: Takefumi
  full_name: Hiraki, Takefumi
  last_name: Hiraki
- first_name: Irina-Malina
  full_name: Strugaru, Irina-Malina
  id: 2afc607f-f128-11eb-9611-8f2a0dfcf074
  last_name: Strugaru
- first_name: Yuhan
  full_name: Zhang, Yuhan
  last_name: Zhang
- first_name: Michael
  full_name: Piovarci, Michael
  id: 62E473F4-5C99-11EA-A40E-AF823DDC885E
  last_name: Piovarci
  orcid: 0000-0002-5062-4474
- first_name: Chiara
  full_name: Daraio, Chiara
  last_name: Daraio
- first_name: Daisuke
  full_name: Iwai, Daisuke
  last_name: Iwai
- first_name: Bernd
  full_name: Bickel, Bernd
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
citation:
  ama: Bhargava M, Hiraki T, Strugaru I-M, et al. Computational design and fabrication
    of modular robots with untethered control. <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/arXiv.2508.05410">10.48550/arXiv.2508.05410</a>
  apa: Bhargava, M., Hiraki, T., Strugaru, I.-M., Zhang, Y., Piovarci, M., Daraio,
    C., … Bickel, B. (n.d.). Computational design and fabrication of modular robots
    with untethered control. <i>arXiv</i>. <a href="https://doi.org/10.48550/arXiv.2508.05410">https://doi.org/10.48550/arXiv.2508.05410</a>
  chicago: Bhargava, Manas, Takefumi Hiraki, Irina-Malina Strugaru, Yuhan Zhang, Michael
    Piovarci, Chiara Daraio, Daisuke Iwai, and Bernd Bickel. “Computational Design
    and Fabrication of Modular Robots with Untethered Control.” <i>ArXiv</i>, n.d.
    <a href="https://doi.org/10.48550/arXiv.2508.05410">https://doi.org/10.48550/arXiv.2508.05410</a>.
  ieee: M. Bhargava <i>et al.</i>, “Computational design and fabrication of modular
    robots with untethered control,” <i>arXiv</i>. .
  ista: Bhargava M, Hiraki T, Strugaru I-M, Zhang Y, Piovarci M, Daraio C, Iwai D,
    Bickel B. Computational design and fabrication of modular robots with untethered
    control. arXiv, <a href="https://doi.org/10.48550/arXiv.2508.05410">10.48550/arXiv.2508.05410</a>.
  mla: Bhargava, Manas, et al. “Computational Design and Fabrication of Modular Robots
    with Untethered Control.” <i>ArXiv</i>, doi:<a href="https://doi.org/10.48550/arXiv.2508.05410">10.48550/arXiv.2508.05410</a>.
  short: M. Bhargava, T. Hiraki, I.-M. Strugaru, Y. Zhang, M. Piovarci, C. Daraio,
    D. Iwai, B. Bickel, ArXiv (n.d.).
corr_author: '1'
date_created: 2025-09-04T09:14:11Z
date_published: 2025-08-31T00:00:00Z
date_updated: 2026-05-04T12:41:52Z
day: '31'
department:
- _id: BeBi
doi: 10.48550/arXiv.2508.05410
ec_funded: 1
external_id:
  arxiv:
  - '2508.05410'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2508.05410
month: '08'
oa: 1
oa_version: Preprint
project:
- _id: 24F9549A-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '715767'
  name: 'MATERIALIZABLE: Intelligent fabrication-oriented Computational Design and
    Modeling'
publication: arXiv
publication_status: draft
related_material:
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  - id: '20276'
    relation: dissertation_contains
    status: public
status: public
title: Computational design and fabrication of modular robots with untethered control
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: preprint
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2025'
...
